Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146430 | XP_013466131.1 | 95.918 | 1372 | 48 | 4 | 1 | 1368 | 1 | 1368 | 0.0 | 2682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146430 | sp|Q9FWS1|AUL1_ARATH | 57.962 | 314 | 117 | 7 | 1062 | 1368 | 1145 | 1450 | 4.13e-88 | 318 |
| Msa0146430 | sp|Q9FWS1|AUL1_ARATH | 30.752 | 452 | 233 | 21 | 1 | 438 | 1 | 386 | 8.21e-29 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146430 | A0A072VPW1 | 95.918 | 1372 | 48 | 4 | 1 | 1368 | 1 | 1368 | 0.0 | 2682 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003520 | Msa0146430 | 0.987647 | 5.087272e-171 | -8.615850e-47 |
| Msa0146430 | Msa1043610 | 0.942727 | 4.298324e-102 | -8.615850e-47 |
| Msa0146430 | Msa1374180 | 0.925601 | 1.470087e-90 | -8.615850e-47 |
| Msa0146430 | Msa1382680 | 0.877872 | 4.435087e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146430 | MtrunA17_Chr1g0155381 | 95.918 | 1372 | 48 | 4 | 1 | 1368 | 1 | 1368 | 0.0 | 2682 |
| Msa0146430 | MtrunA17_Chr8g0384651 | 64.744 | 156 | 55 | 0 | 1212 | 1367 | 756 | 911 | 3.30e-59 | 221 |
| Msa0146430 | MtrunA17_Chr3g0130631 | 64.103 | 156 | 56 | 0 | 1212 | 1367 | 578 | 733 | 7.56e-59 | 217 |
| Msa0146430 | MtrunA17_Chr3g0125121 | 51.337 | 187 | 80 | 3 | 1191 | 1367 | 334 | 519 | 2.26e-52 | 193 |
| Msa0146430 | MtrunA17_Chr3g0141421 | 56.383 | 94 | 41 | 0 | 1272 | 1365 | 596 | 689 | 5.12e-32 | 134 |
| Msa0146430 | MtrunA17_Chr2g0304091 | 53.125 | 96 | 45 | 0 | 1272 | 1367 | 357 | 452 | 1.02e-27 | 118 |
| Msa0146430 | MtrunA17_Chr8g0376701 | 51.042 | 96 | 47 | 0 | 1272 | 1367 | 364 | 459 | 8.71e-27 | 115 |
| Msa0146430 | MtrunA17_Chr8g0372931 | 27.295 | 414 | 238 | 17 | 24 | 430 | 28 | 385 | 4.41e-18 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146430 | AT1G75310.2 | 58.466 | 313 | 118 | 6 | 1062 | 1368 | 1145 | 1451 | 7.56e-90 | 321 |
| Msa0146430 | AT1G75310.2 | 30.752 | 452 | 233 | 21 | 1 | 438 | 1 | 386 | 7.29e-30 | 129 |
| Msa0146430 | AT1G75310.1 | 57.643 | 314 | 116 | 7 | 1062 | 1368 | 1145 | 1448 | 1.37e-88 | 317 |
| Msa0146430 | AT1G75310.1 | 30.752 | 452 | 233 | 21 | 1 | 438 | 1 | 386 | 7.47e-30 | 129 |
| Msa0146430 | AT4G36520.1 | 49.162 | 358 | 148 | 10 | 1032 | 1368 | 1078 | 1422 | 9.10e-79 | 286 |
| Msa0146430 | AT4G36520.1 | 31.481 | 216 | 104 | 9 | 7 | 181 | 13 | 225 | 6.66e-18 | 90.9 |
| Msa0146430 | AT4G12780.3 | 61.333 | 150 | 58 | 0 | 1218 | 1367 | 726 | 875 | 4.62e-51 | 196 |
| Msa0146430 | AT4G12780.1 | 61.333 | 150 | 58 | 0 | 1218 | 1367 | 753 | 902 | 5.92e-51 | 196 |
| Msa0146430 | AT4G12770.2 | 59.615 | 156 | 62 | 1 | 1212 | 1367 | 733 | 887 | 6.17e-51 | 196 |
| Msa0146430 | AT4G12770.1 | 60.667 | 150 | 59 | 0 | 1218 | 1367 | 740 | 889 | 6.26e-51 | 196 |
| Msa0146430 | AT4G12780.2 | 56.287 | 167 | 56 | 2 | 1218 | 1367 | 726 | 892 | 7.78e-48 | 186 |
| Msa0146430 | AT1G21660.1 | 53.521 | 142 | 66 | 0 | 1226 | 1367 | 380 | 521 | 1.57e-45 | 173 |
| Msa0146430 | AT1G75100.1 | 59.341 | 91 | 37 | 0 | 1274 | 1364 | 556 | 646 | 1.39e-31 | 133 |
| Msa0146430 | AT1G30280.1 | 50.000 | 84 | 41 | 1 | 1278 | 1360 | 361 | 444 | 1.23e-18 | 91.3 |
| Msa0146430 | AT1G30280.2 | 47.253 | 91 | 44 | 3 | 1278 | 1365 | 361 | 450 | 3.16e-16 | 83.6 |
Find 272 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTCTGTAGCTGCTTTA+AGG | 0.107747 | 1_4:+6077973 | Msa0146430:CDS |
| CCCTCGCTGCTGCAGCTTAT+CGG | 0.205621 | 1_4:-6081671 | None:intergenic |
| ACAGCCTGTAACAGATAATT+TGG | 0.210029 | 1_4:+6077812 | Msa0146430:CDS |
| TTGAAATGGTTAAGGAATAT+TGG | 0.215083 | 1_4:+6078483 | Msa0146430:CDS |
| TTATCCAAATTATCTGTTAC+AGG | 0.228191 | 1_4:-6077816 | None:intergenic |
| TTGAGTCAACCGTGTCTTCT+AGG | 0.241410 | 1_4:-6077938 | None:intergenic |
| TTAGTAACTTGAACAGATTC+TGG | 0.251253 | 1_4:-6079604 | None:intergenic |
| AATTATTCCTTGATTAATAA+AGG | 0.263834 | 1_4:-6082340 | None:intergenic |
| TTGCTTTGTTCCATTGCTTC+TGG | 0.266976 | 1_4:-6080463 | None:intergenic |
| GTTAATCAAGGAAGTGAAAA+TGG | 0.268655 | 1_4:+6077333 | Msa0146430:CDS |
| GACTGTTTCTTGACATTATT+AGG | 0.275632 | 1_4:-6077675 | None:intergenic |
| GATTCTACTGGGGTCTTTGA+TGG | 0.278154 | 1_4:+6080625 | Msa0146430:CDS |
| GCAAAGGCTAGTGATTTAAA+TGG | 0.292351 | 1_4:+6079220 | Msa0146430:CDS |
| CTCTCGATGCCGATGTTAAA+AGG | 0.297624 | 1_4:+6080953 | Msa0146430:CDS |
| ATATGACATATTGATCGTTT+TGG | 0.308968 | 1_4:-6077304 | None:intergenic |
| ACTATTGCTGTTAAAGGAAT+TGG | 0.313533 | 1_4:-6081595 | None:intergenic |
| TGAAATGGTTAAGGAATATT+GGG | 0.315628 | 1_4:+6078484 | Msa0146430:CDS |
| TCTCTTCATCGTGGTGAATA+TGG | 0.316778 | 1_4:-6079183 | None:intergenic |
| CTTGGAGTTCTTAGCTTGAT+TGG | 0.316936 | 1_4:-6076244 | None:intergenic |
| ACCTCTTCCTTATGTTTGTC+TGG | 0.323897 | 1_4:-6078329 | None:intergenic |
| TCTGAAGTTCGTGATTCTAC+TGG | 0.332930 | 1_4:+6080613 | Msa0146430:intron |
| CTTACTTTCTCTGTTCTCAT+TGG | 0.337977 | 1_4:-6078230 | None:intergenic |
| TTCAACTTCTCAGTTTCATC+TGG | 0.344128 | 1_4:-6079442 | None:intergenic |
| CTAGTATCAATTTGAAAGTC+AGG | 0.344292 | 1_4:+6078090 | Msa0146430:CDS |
| GTGGTTACTATTGCTGTTAA+AGG | 0.345660 | 1_4:-6081601 | None:intergenic |
| ATCAATTCCCAGCAAAATAA+AGG | 0.348948 | 1_4:+6079981 | Msa0146430:CDS |
| ATTGTATGATCAGATTCTTC+AGG | 0.350719 | 1_4:-6078461 | None:intergenic |
| GGAAGTGAAAATGGAACAAA+TGG | 0.350748 | 1_4:+6077342 | Msa0146430:CDS |
| GAAGGAATGCATCTGGTTCT+TGG | 0.351045 | 1_4:+6079062 | Msa0146430:CDS |
| CCTCGCTGCTGCAGCTTATC+GGG | 0.364311 | 1_4:-6081670 | None:intergenic |
| TCTCAGACAGTGCCCTCTCC+AGG | 0.368364 | 1_4:-6080377 | None:intergenic |
| ATCTGGTTCATAGCTAGAAC+TGG | 0.372127 | 1_4:-6079425 | None:intergenic |
| TTGGCATTCTTCCTGATCAA+TGG | 0.376138 | 1_4:-6078813 | None:intergenic |
| TTTCACCTCCTCTTCTTTGA+AGG | 0.377050 | 1_4:-6079959 | None:intergenic |
| TGCAAGAGAGAGGGCAGCTC+TGG | 0.378359 | 1_4:+6080182 | Msa0146430:CDS |
| TGTCAAGTGTCGCCTGAATC+AGG | 0.382236 | 1_4:-6078616 | None:intergenic |
| CGTTTCGATGCTTTAGGCTT+CGG | 0.382721 | 1_4:-6076460 | None:intergenic |
| CGGTAAGCTTTCTTTACATC+AGG | 0.383896 | 1_4:-6081625 | None:intergenic |
| AAGGCAAACATTTGGAGAAA+TGG | 0.384101 | 1_4:+6078169 | Msa0146430:CDS |
| GAGAAAGTAAGATCAGATAT+CGG | 0.385527 | 1_4:+6078242 | Msa0146430:CDS |
| CTTGAATTTCGCAGATCCTT+GGG | 0.387936 | 1_4:+6081554 | Msa0146430:intron |
| GACTTCTGTTTGACATGATC+AGG | 0.389147 | 1_4:-6078068 | None:intergenic |
| TGGTGAAACAAACCTGATTC+AGG | 0.391490 | 1_4:+6078604 | Msa0146430:CDS |
| ATGAAGTAGGCAAATTTAGA+AGG | 0.391541 | 1_4:+6082217 | Msa0146430:three_prime_UTR |
| CTGCAAGTTTCTTCTGATGT+AGG | 0.393651 | 1_4:+6078200 | Msa0146430:CDS |
| GTCAGTTTCACCAACATTTG+TGG | 0.394233 | 1_4:-6079746 | None:intergenic |
| GATTCCGATTCTCGAACTTC+CGG | 0.394240 | 1_4:+6076324 | Msa0146430:CDS |
| CTGAAGTTCGTGATTCTACT+GGG | 0.396066 | 1_4:+6080614 | Msa0146430:intron |
| ACTTTGAGATGCTTGGCATT+TGG | 0.397058 | 1_4:-6077874 | None:intergenic |
| GCACACAAAGAGTGGCTTTA+CGG | 0.399428 | 1_4:-6081645 | None:intergenic |
| AAATAAGCCTTTATTAATCA+AGG | 0.399742 | 1_4:+6082333 | Msa0146430:three_prime_UTR |
| ACTCACCGTTTCGATGCTTT+AGG | 0.400557 | 1_4:-6076466 | None:intergenic |
| AGGTTAATTACAGAGCCTTT+TGG | 0.402036 | 1_4:-6078713 | None:intergenic |
| ATTAATACAAGGCAAACATT+TGG | 0.403690 | 1_4:+6078161 | Msa0146430:CDS |
| GGAGACAATTTCAATTTGTT+CGG | 0.404035 | 1_4:-6078308 | None:intergenic |
| TTCTAGGTACGTCGGTGAAT+CGG | 0.404391 | 1_4:-6077922 | None:intergenic |
| TTGAGAGCTATTCAGGAACT+TGG | 0.413355 | 1_4:+6078842 | Msa0146430:CDS |
| CAGATCCTTGGGCCCGATAG+TGG | 0.417009 | 1_4:+6081565 | Msa0146430:intron |
| AGAGGCTCAAATGAAAATAA+AGG | 0.417325 | 1_4:+6078007 | Msa0146430:CDS |
| ATCTGATCATACAATTGAAA+TGG | 0.417927 | 1_4:+6078469 | Msa0146430:CDS |
| ACTTGAATTTCGCAGATCCT+TGG | 0.423963 | 1_4:+6081553 | Msa0146430:intron |
| GCAAAACCAAGATCAGTGTT+TGG | 0.424713 | 1_4:+6079780 | Msa0146430:CDS |
| GACTAAATGGTCCATTGATC+AGG | 0.429201 | 1_4:+6078802 | Msa0146430:CDS |
| GGAGATAAGAGAAGAAGAAC+CGG | 0.431525 | 1_4:+6079387 | Msa0146430:CDS |
| TTCAAACCTCGATTACTCTA+AGG | 0.432981 | 1_4:+6076384 | Msa0146430:CDS |
| AAGAGGTAGAACATTCCTAT+TGG | 0.433303 | 1_4:+6079095 | Msa0146430:CDS |
| TCATACAATTGAAATGGTTA+AGG | 0.433305 | 1_4:+6078475 | Msa0146430:CDS |
| TTCCTTCACTTCCTTTGTCA+CGG | 0.434366 | 1_4:-6080019 | None:intergenic |
| TAAAGACGAGCAGAGCTAAA+TGG | 0.438524 | 1_4:+6077433 | Msa0146430:CDS |
| TACCTTCTGTGACTTACCAT+TGG | 0.438804 | 1_4:-6080043 | None:intergenic |
| TATAGCTTTCCCTCCATTGT+TGG | 0.441602 | 1_4:-6077577 | None:intergenic |
| AAGGAATGCATCTGGTTCTT+GGG | 0.441677 | 1_4:+6079063 | Msa0146430:CDS |
| CCACAGAGTGCATGACCATC+AGG | 0.447760 | 1_4:-6082144 | None:intergenic |
| TCCATTGCAGTCTTCTCAGC+CGG | 0.447833 | 1_4:-6080291 | None:intergenic |
| ATTTGTGGAATCATTGTCAA+TGG | 0.449575 | 1_4:-6079731 | None:intergenic |
| AAAGAATAGAGAAAGAGAAA+AGG | 0.450397 | 1_4:+6080104 | Msa0146430:CDS |
| GATGCACCAACATACTTCTC+TGG | 0.450847 | 1_4:-6080441 | None:intergenic |
| TCAATTAAACAAGTGTAAGC+AGG | 0.451248 | 1_4:-6077396 | None:intergenic |
| TCCTATTCTCTGATGCCTCT+CGG | 0.453315 | 1_4:-6080686 | None:intergenic |
| AGAAAGTAAGATCAGATATC+GGG | 0.453718 | 1_4:+6078243 | Msa0146430:CDS |
| TTTGTTCGGTGCTTCTTGTA+CGG | 0.456160 | 1_4:-6078294 | None:intergenic |
| TTCACCTCCTCTTCTTTGAA+GGG | 0.458847 | 1_4:-6079958 | None:intergenic |
| GTCGCCGTCGTCATGGAGTT+CGG | 0.459242 | 1_4:+6076136 | None:intergenic |
| AATTGGTTGCCAACCACTAT+CGG | 0.462991 | 1_4:-6081578 | None:intergenic |
| AGGTGGGAAATCGTCGATGA+TGG | 0.467613 | 1_4:+6078736 | Msa0146430:CDS |
| TCCGGTGACGGAGTGGCTGT+TGG | 0.468983 | 1_4:-6076191 | None:intergenic |
| GTGATATCACCTTCATTCAA+TGG | 0.473045 | 1_4:+6077279 | Msa0146430:CDS |
| CAGACTTCTGACTTTGATGA+AGG | 0.476599 | 1_4:+6079652 | Msa0146430:CDS |
| AGTTGAAGAAGTTGAGAACA+AGG | 0.478684 | 1_4:+6078673 | Msa0146430:CDS |
| CCCTCATTGTCTAATAGCTC+CGG | 0.479146 | 1_4:-6078959 | None:intergenic |
| CTGGATTCTGAGGTGATGCC+CGG | 0.479225 | 1_4:-6079406 | None:intergenic |
| CAAAAGTGTCAAGAAGTTGC+TGG | 0.481130 | 1_4:+6078584 | Msa0146430:CDS |
| CCGATAAGCTGCAGCAGCGA+GGG | 0.484078 | 1_4:+6081671 | Msa0146430:CDS |
| CACAGAAGGTAGAGGTGGAT+AGG | 0.484797 | 1_4:+6080055 | Msa0146430:CDS |
| CCAAGATCAGTGTTTGGAAA+AGG | 0.486328 | 1_4:+6079786 | Msa0146430:CDS |
| TTCGGAATCAGTTCTTCAAA+AGG | 0.486473 | 1_4:-6076442 | None:intergenic |
| TCTCGAACTTCCGGAGCTCA+AGG | 0.488088 | 1_4:+6076333 | Msa0146430:CDS |
| TCAAACTGATCTAATTTATG+AGG | 0.490972 | 1_4:+6079366 | Msa0146430:CDS |
| CGAGGGAGCCACACACCCTA+TGG | 0.495109 | 1_4:+6079285 | Msa0146430:CDS |
| TGAGTCTATAGAAATATGTA+TGG | 0.500843 | 1_4:+6079855 | Msa0146430:CDS |
| GCTATTCAGGAACTTGGAAA+TGG | 0.501968 | 1_4:+6078848 | Msa0146430:CDS |
| CTTCATCAAAGTCAGAAGTC+TGG | 0.502637 | 1_4:-6079651 | None:intergenic |
| TGATCTGCAGGATGATATAA+TGG | 0.503126 | 1_4:+6079537 | Msa0146430:CDS |
| CATTCAAAATCTTTCAGCTA+TGG | 0.503489 | 1_4:+6080492 | Msa0146430:CDS |
| TACACTGTTTCACTGAGTAC+AGG | 0.506736 | 1_4:-6079679 | None:intergenic |
| GTGAAACTGACATGAAGGTT+AGG | 0.506937 | 1_4:+6079758 | Msa0146430:CDS |
| ATTGATGTCTTCAGGAAGCA+TGG | 0.507037 | 1_4:+6082072 | Msa0146430:intron |
| GAATATTGGGAGCAGGAGAA+TGG | 0.507785 | 1_4:+6078497 | Msa0146430:CDS |
| ACAGAAGGTAGAGGTGGATA+GGG | 0.508513 | 1_4:+6080056 | Msa0146430:CDS |
| AGCTCCGGAAGTTCGAGAAT+CGG | 0.508743 | 1_4:-6076328 | None:intergenic |
| TCCAACAGCCACTCCGTCAC+CGG | 0.509216 | 1_4:+6076190 | Msa0146430:CDS |
| AGGTGGTCAAGTGGGAAGGC+AGG | 0.509799 | 1_4:+6080973 | Msa0146430:CDS |
| GCAGGAGAATGGTGAAGAAA+AGG | 0.512746 | 1_4:+6078508 | Msa0146430:CDS |
| ATCAGTGGCTTCTCTCCAAT+AGG | 0.513023 | 1_4:-6079110 | None:intergenic |
| CTCAGACAGTGCCCTCTCCA+GGG | 0.513165 | 1_4:-6080376 | None:intergenic |
| TCCGAGAGGCATCAGAGAAT+AGG | 0.514883 | 1_4:+6080685 | Msa0146430:CDS |
| CTGAGATGCTTCACAAGAAG+AGG | 0.516080 | 1_4:-6079932 | None:intergenic |
| AGAGGCAAGAGCACGTGCCC+TGG | 0.516970 | 1_4:+6080359 | Msa0146430:CDS |
| GCCGTCGTAAGCAGATCTTC+CGG | 0.518660 | 1_4:-6076209 | None:intergenic |
| AGAAATATGTATGGATGCAA+AGG | 0.520243 | 1_4:+6079864 | Msa0146430:CDS |
| ATGTGAATTGACAGAGTCTC+CGG | 0.521094 | 1_4:+6078940 | Msa0146430:CDS |
| ATTGGTTGCCAACCACTATC+GGG | 0.521170 | 1_4:-6081577 | None:intergenic |
| AAGTGAGAATAAAGTTGAAG+TGG | 0.522061 | 1_4:+6078901 | Msa0146430:CDS |
| GGCTCTGTAATTAACCTAGG+TGG | 0.523520 | 1_4:+6078719 | Msa0146430:CDS |
| ATTCTCCTTTCCTTGAGCTC+CGG | 0.524021 | 1_4:-6076343 | None:intergenic |
| GGTTAAGGAATATTGGGAGC+AGG | 0.526989 | 1_4:+6078490 | Msa0146430:CDS |
| TCAATGAGAAGAAAGAAAGA+AGG | 0.527897 | 1_4:+6078041 | Msa0146430:CDS |
| ACAGATTCAACATGGAAGAA+AGG | 0.528950 | 1_4:+6082096 | Msa0146430:CDS |
| ACACCGTTTAATGAACCAAA+AGG | 0.529177 | 1_4:+6078698 | Msa0146430:CDS |
| ATGTTAATTGTGCTTCCTGA+TGG | 0.531295 | 1_4:+6082129 | Msa0146430:three_prime_UTR |
| TTTCTCATTTGCTTGACAAG+TGG | 0.531448 | 1_4:-6080265 | None:intergenic |
| ATTGTCTCCAGACAAACATA+AGG | 0.533755 | 1_4:+6078322 | Msa0146430:CDS |
| AAGAGCACGTGCCCTGGAGA+GGG | 0.533837 | 1_4:+6080365 | Msa0146430:CDS |
| TGACATTATTAGGTGAAGCA+TGG | 0.537366 | 1_4:-6077665 | None:intergenic |
| GCTCTGTAATTAACCTAGGT+GGG | 0.540673 | 1_4:+6078720 | Msa0146430:CDS |
| TGGAAGAAAATGCGAGTGAA+AGG | 0.540789 | 1_4:+6079305 | Msa0146430:CDS |
| TCATATCATAAAGTTAATCA+AGG | 0.541152 | 1_4:+6077321 | Msa0146430:CDS |
| GTGCTTCTTTGTTAGTGTTG+AGG | 0.541232 | 1_4:-6076167 | None:intergenic |
| TATAGGAGCAAAGTCAAAAG+TGG | 0.544215 | 1_4:+6077207 | Msa0146430:intron |
| GACAATGATTCCACAAATGT+TGG | 0.545389 | 1_4:+6079736 | Msa0146430:CDS |
| TTATCTGTTACAGGCTGTGA+AGG | 0.546462 | 1_4:-6077807 | None:intergenic |
| TTGAATGAAGGTGATATCAC+CGG | 0.549105 | 1_4:-6077276 | None:intergenic |
| CAATTCGTGAAGCTCGTGAA+AGG | 0.549174 | 1_4:+6080148 | Msa0146430:CDS |
| AGATCGTGTTAATTCTTCAA+AGG | 0.551548 | 1_4:+6077248 | Msa0146430:CDS |
| CCCGATAAGCTGCAGCAGCG+AGG | 0.552225 | 1_4:+6081670 | Msa0146430:CDS |
| AGCAATGGAACAAAGCAAAA+CGG | 0.552231 | 1_4:+6080468 | Msa0146430:CDS |
| CTGCTCAGAGATGTAAAGCT+AGG | 0.553857 | 1_4:+6080662 | Msa0146430:CDS |
| ATGTGCCACTTTGAGATGCT+TGG | 0.554499 | 1_4:-6077881 | None:intergenic |
| GGAGAGGGCACTGTCTGAGA+AGG | 0.555104 | 1_4:+6080380 | Msa0146430:CDS |
| TTCTGTAGCTGCTTTAAGGA+AGG | 0.556360 | 1_4:+6077977 | Msa0146430:CDS |
| ATTGGCTATAAGCCAGAAGA+TGG | 0.556595 | 1_4:+6078773 | Msa0146430:CDS |
| AACAGTCTTTCAACAATGGA+GGG | 0.557749 | 1_4:+6077691 | Msa0146430:CDS |
| ATGGTCTATACCAGCAGCAA+AGG | 0.559400 | 1_4:+6077452 | Msa0146430:CDS |
| TATCAATGTCAAGGAAACAC+TGG | 0.561651 | 1_4:+6079147 | Msa0146430:CDS |
| ACACTGTTTCACTGAGTACA+GGG | 0.561909 | 1_4:-6079678 | None:intergenic |
| GCAGTTAATGAAGCAAGTTA+TGG | 0.562495 | 1_4:+6078536 | Msa0146430:CDS |
| AGCTTTCTTTACATCAGGTG+TGG | 0.562529 | 1_4:-6081620 | None:intergenic |
| CAGGATGATATAATGGTCAC+AGG | 0.563576 | 1_4:+6079544 | Msa0146430:CDS |
| TAAAGCTGAACGCGCTGCTG+TGG | 0.563761 | 1_4:+6080323 | Msa0146430:CDS |
| GGTGGGAAATCGTCGATGAT+GGG | 0.564317 | 1_4:+6078737 | Msa0146430:CDS |
| TCCAGACAAACATAAGGAAG+AGG | 0.565417 | 1_4:+6078328 | Msa0146430:CDS |
| GATTTCTGCGAGAAACATGC+AGG | 0.566233 | 1_4:+6079628 | Msa0146430:CDS |
| TCAAAATCTTTCAGCTATGG+TGG | 0.566831 | 1_4:+6080495 | Msa0146430:CDS |
| AATTCGTGAAGCTCGTGAAA+GGG | 0.566984 | 1_4:+6080149 | Msa0146430:CDS |
| AAACAGTCTTTCAACAATGG+AGG | 0.567430 | 1_4:+6077690 | Msa0146430:CDS |
| ATCCGTGACAAAGGAAGTGA+AGG | 0.567826 | 1_4:+6080017 | Msa0146430:CDS |
| GCCAACCACTATCGGGCCCA+AGG | 0.567934 | 1_4:-6081570 | None:intergenic |
| ATGTTAAAAGGTGGTCAAGT+GGG | 0.568578 | 1_4:+6080965 | Msa0146430:CDS |
| CTTCTTTGTTAGTGTTGAGG+TGG | 0.569116 | 1_4:-6076164 | None:intergenic |
| GCAAAAGTACACTTGTGAGA+AGG | 0.569795 | 1_4:+6081705 | Msa0146430:CDS |
| TCCTTGGGCCCGATAGTGGT+TGG | 0.570322 | 1_4:+6081569 | Msa0146430:CDS |
| TCCGGAGCTATTAGACAATG+AGG | 0.570468 | 1_4:+6078958 | Msa0146430:CDS |
| TCATTCAGAATTAATAAGCA+TGG | 0.570815 | 1_4:+6078997 | Msa0146430:CDS |
| CAAGAGCACGTGCCCTGGAG+AGG | 0.571595 | 1_4:+6080364 | Msa0146430:CDS |
| TTCTGGTATTCATTGTGACG+AGG | 0.571760 | 1_4:+6077482 | Msa0146430:CDS |
| AATATGTATGGATGCAAAGG+AGG | 0.571943 | 1_4:+6079867 | Msa0146430:CDS |
| CTTATTAATTCTGAATGATG+AGG | 0.573496 | 1_4:-6078992 | None:intergenic |
| AACTTCCGGAGCTCAAGGAA+AGG | 0.573960 | 1_4:+6076338 | Msa0146430:CDS |
| AGTGACAGACAAGAGGTTGA+AGG | 0.574258 | 1_4:+6078643 | Msa0146430:CDS |
| AACAGTCTTCCAACAATGGA+GGG | 0.577439 | 1_4:+6077568 | Msa0146430:CDS |
| GTTGGTGCATCCAGAAGCAA+TGG | 0.578128 | 1_4:+6080453 | Msa0146430:CDS |
| AAGTGTAAGCAGGGACAGCA+TGG | 0.578502 | 1_4:-6077386 | None:intergenic |
| GGAGCTCAAGGAAAGGAGAA+TGG | 0.580568 | 1_4:+6076345 | Msa0146430:CDS |
| AAGAAACAGTCTTTCAACAA+TGG | 0.581600 | 1_4:+6077687 | Msa0146430:CDS |
| GTAAGCAGATCTTCCGGTGA+CGG | 0.582348 | 1_4:-6076203 | None:intergenic |
| GAAGTGAAAATGGAACAAAT+GGG | 0.583313 | 1_4:+6077343 | Msa0146430:CDS |
| CGATAAGCTGCAGCAGCGAG+GGG | 0.583635 | 1_4:+6081672 | Msa0146430:CDS |
| TAATTCTTCAAAGGAAATCC+CGG | 0.584483 | 1_4:+6077257 | Msa0146430:CDS |
| ACTCGTGCAGAAAGAGCAAG+AGG | 0.584590 | 1_4:+6080840 | Msa0146430:CDS |
| TAGTATCAATTTGAAAGTCA+GGG | 0.586049 | 1_4:+6078091 | Msa0146430:CDS |
| GAGAGAGGGCAGCTCTGGAG+AGG | 0.586072 | 1_4:+6080187 | Msa0146430:CDS |
| AAAGGCTCTGTAATTAACCT+AGG | 0.588058 | 1_4:+6078716 | Msa0146430:CDS |
| CTGAAAGAAGCAGATCATGA+AGG | 0.589550 | 1_4:+6078356 | Msa0146430:CDS |
| AAGAAACAGTCTTCCAACAA+TGG | 0.589832 | 1_4:+6077564 | Msa0146430:CDS |
| TCAGATACCCTTCAAAGAAG+AGG | 0.590042 | 1_4:+6079951 | Msa0146430:CDS |
| TCTGGTATTCATTGTGACGA+GGG | 0.590444 | 1_4:+6077483 | Msa0146430:CDS |
| ATCGGGATGCACACAAAGAG+TGG | 0.590973 | 1_4:-6081653 | None:intergenic |
| TGTGACGAGGGGATAAAAGA+AGG | 0.591437 | 1_4:+6077495 | Msa0146430:CDS |
| CCGGAGCTATTAGACAATGA+GGG | 0.593751 | 1_4:+6078959 | Msa0146430:CDS |
| TCATCAAACATCCGTGACAA+AGG | 0.593967 | 1_4:+6080008 | Msa0146430:CDS |
| ATACATATTTCTATAGACTC+AGG | 0.594208 | 1_4:-6079853 | None:intergenic |
| GGCACATATGAAAGTGCTGC+TGG | 0.595442 | 1_4:+6077897 | Msa0146430:CDS |
| TCGTCGAATTGAGAGAAGCT+TGG | 0.598506 | 1_4:-6076262 | None:intergenic |
| AGAGAGGGCAGCTCTGGAGA+GGG | 0.599872 | 1_4:+6080188 | Msa0146430:CDS |
| ATAGCTAGAACTGGATTCTG+AGG | 0.600865 | 1_4:-6079416 | None:intergenic |
| TGGTAAGTCACAGAAGGTAG+AGG | 0.601388 | 1_4:+6080047 | Msa0146430:CDS |
| ATAAAACATATCAACAGAGT+CGG | 0.601558 | 1_4:-6077730 | None:intergenic |
| CATTGATACTTCGAGATCAA+CGG | 0.604620 | 1_4:+6077848 | Msa0146430:CDS |
| AGCCAATGGTAAGTCACAGA+AGG | 0.605760 | 1_4:+6080041 | Msa0146430:CDS |
| CAATTAAACAAGTGTAAGCA+GGG | 0.607398 | 1_4:-6077395 | None:intergenic |
| AGCTCATGTTTGTATGAAGT+AGG | 0.607464 | 1_4:+6082204 | Msa0146430:three_prime_UTR |
| AAACAGTCTTCCAACAATGG+AGG | 0.609392 | 1_4:+6077567 | Msa0146430:CDS |
| GTTTAGCAATATCAATGTCA+AGG | 0.609500 | 1_4:+6079138 | Msa0146430:CDS |
| CGAAGCCTAAAGCATCGAAA+CGG | 0.609970 | 1_4:+6076461 | Msa0146430:CDS |
| GATTACTCTAAGGTCTTCAG+CGG | 0.610407 | 1_4:+6076394 | Msa0146430:CDS |
| GTGATTTAAATGGAAATGTG+AGG | 0.611031 | 1_4:+6079230 | Msa0146430:CDS |
| GAGATAAGAGAAGAAGAACC+GGG | 0.611426 | 1_4:+6079388 | Msa0146430:CDS |
| CTGGTATTCATTGTGACGAG+GGG | 0.611620 | 1_4:+6077484 | Msa0146430:CDS |
| TCTGTTACAGGCTGTGAAGG+AGG | 0.611639 | 1_4:-6077804 | None:intergenic |
| CATTTGCTGATGCAAGAGAG+AGG | 0.611807 | 1_4:+6080172 | Msa0146430:CDS |
| TCTGGTCCAGAGAAGTATGT+TGG | 0.615382 | 1_4:+6080435 | Msa0146430:CDS |
| CAGATCTTCCGGTGACGGAG+TGG | 0.615944 | 1_4:-6076198 | None:intergenic |
| CCTGATGGTCATGCACTCTG+TGG | 0.617182 | 1_4:+6082144 | Msa0146430:three_prime_UTR |
| TAAAAGGTGGTCAAGTGGGA+AGG | 0.619386 | 1_4:+6080969 | Msa0146430:CDS |
| TCTGAATGATGAGGACTGCA+CGG | 0.627361 | 1_4:-6078983 | None:intergenic |
| ATTGCTAAACGTACTATCAG+TGG | 0.628136 | 1_4:-6079125 | None:intergenic |
| GATTTATGAAAGAAATGCAA+AGG | 0.628939 | 1_4:+6079204 | Msa0146430:CDS |
| TGTTGGTGAAACTGACATGA+AGG | 0.630531 | 1_4:+6079753 | Msa0146430:CDS |
| TGAAGTTCGTGATTCTACTG+GGG | 0.631933 | 1_4:+6080615 | Msa0146430:intron |
| ATCAGAAGAAACTTGCAGCA+AGG | 0.633986 | 1_4:-6078195 | None:intergenic |
| AGATCACATGAATAAAACTC+TGG | 0.634048 | 1_4:-6079520 | None:intergenic |
| TGAAGACCTTAGAGTAATCG+AGG | 0.637869 | 1_4:-6076390 | None:intergenic |
| AAATGCCAAGCATCTCAAAG+TGG | 0.637894 | 1_4:+6077876 | Msa0146430:CDS |
| TAAGTCACAGAAGGTAGAGG+TGG | 0.639341 | 1_4:+6080050 | Msa0146430:CDS |
| TTCTTGGGATGTAAATCAAG+AGG | 0.643015 | 1_4:+6079078 | Msa0146430:CDS |
| TTTCATAAATCTCTTCATCG+TGG | 0.643783 | 1_4:-6079192 | None:intergenic |
| ACCGGCTGAGAAGACTGCAA+TGG | 0.644940 | 1_4:+6080290 | Msa0146430:CDS |
| GATGTTAAAAGGTGGTCAAG+TGG | 0.645928 | 1_4:+6080964 | Msa0146430:CDS |
| ACAGTGGAGTGACAGACAAG+AGG | 0.647164 | 1_4:+6078636 | Msa0146430:CDS |
| TTTAAGGAAGGCAATAGAAG+AGG | 0.648026 | 1_4:+6077989 | Msa0146430:CDS |
| TGAATGAAGGTGATATCACC+GGG | 0.649170 | 1_4:-6077275 | None:intergenic |
| ATTTGCTGATGCAAGAGAGA+GGG | 0.650221 | 1_4:+6080173 | Msa0146430:CDS |
| TGTGTCAGATGAAGAGATCG+AGG | 0.651842 | 1_4:+6079897 | Msa0146430:CDS |
| GGCAAATTTAGAAGGCCTGT+AGG | 0.651846 | 1_4:+6082225 | Msa0146430:three_prime_UTR |
| TGAGAAGTTGAACAAAACAC+AGG | 0.652092 | 1_4:+6079453 | Msa0146430:CDS |
| CACGGTTGACTCAAATTCAG+CGG | 0.655198 | 1_4:+6077947 | Msa0146430:CDS |
| GATACCCTTCAAAGAAGAGG+AGG | 0.656350 | 1_4:+6079954 | Msa0146430:CDS |
| CGGAGCTATTAGACAATGAG+GGG | 0.656874 | 1_4:+6078960 | Msa0146430:CDS |
| TAGGGTGTGTGGCTCCCTCG+AGG | 0.657421 | 1_4:-6079282 | None:intergenic |
| TGCTTGTGAAAATGACCTCG+AGG | 0.659552 | 1_4:+6079267 | Msa0146430:CDS |
| TCAAGCAAATGAGAAAACAC+CGG | 0.660997 | 1_4:+6080272 | Msa0146430:CDS |
| TCATCGACGATTTCCCACCT+AGG | 0.661183 | 1_4:-6078733 | None:intergenic |
| AAGGAAGTGAAGGAAGCCAA+TGG | 0.661589 | 1_4:+6080027 | Msa0146430:CDS |
| TGTGGAGAGAGCAACTGCAG+AGG | 0.665838 | 1_4:+6080341 | Msa0146430:CDS |
| AGCATGGAACAGATTCAACA+TGG | 0.665975 | 1_4:+6082088 | Msa0146430:CDS |
| GCTTGTGAAAATGACCTCGA+GGG | 0.669828 | 1_4:+6079268 | Msa0146430:CDS |
| GAGTGAAAGGAAAGACAACA+AGG | 0.671135 | 1_4:+6079318 | Msa0146430:CDS |
| TCAGAGAATAGGAGAACGTG+TGG | 0.673831 | 1_4:+6080696 | Msa0146430:CDS |
| ATTCAGGCGACACTTGACAG+TGG | 0.679117 | 1_4:+6078620 | Msa0146430:CDS |
| GAAAGTAAGATCAGATATCG+GGG | 0.680548 | 1_4:+6078244 | Msa0146430:CDS |
| GATGTAAAGCTAGGTCCGAG+AGG | 0.681919 | 1_4:+6080671 | Msa0146430:CDS |
| GATGCATGCGAGACTAGCAA+CGG | 0.682120 | 1_4:+6077753 | Msa0146430:CDS |
| GACGAGGGGATAAAAGAAGG+TGG | 0.682852 | 1_4:+6077498 | Msa0146430:CDS |
| ACCGTGTCTTCTAGGTACGT+CGG | 0.684457 | 1_4:-6077930 | None:intergenic |
| AAGTTAACGAGATTAATACA+AGG | 0.686891 | 1_4:+6078150 | Msa0146430:CDS |
| CAATGTCAAGGAAACACTGG+AGG | 0.687778 | 1_4:+6079150 | Msa0146430:CDS |
| CACTGTTTCACTGAGTACAG+GGG | 0.697126 | 1_4:-6079677 | None:intergenic |
| TCGATGCCGATGTTAAAAGG+TGG | 0.697898 | 1_4:+6080956 | Msa0146430:CDS |
| ACCGGAAGATCTGCTTACGA+CGG | 0.704223 | 1_4:+6076208 | Msa0146430:CDS |
| ACCGACGTACCTAGAAGACA+CGG | 0.718058 | 1_4:+6077929 | Msa0146430:CDS |
| TCAATTCGACGATTACAACG+AGG | 0.771806 | 1_4:+6076273 | Msa0146430:CDS |
| TGAAAGGAAAGACAACAAGG+TGG | 0.803777 | 1_4:+6079321 | Msa0146430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAACAAAAAAAAAAAAA+AGG | - | chr1_4:6076723-6076742 | None:intergenic | 10.0% |
| !! | AAAGAAATAAAAAAAAAAGA+AGG | - | chr1_4:6080561-6080580 | None:intergenic | 10.0% |
| !!! | CAATTTTGTAGTATTATTAT+CGG | + | chr1_4:6076844-6076863 | Msa0146430:intron | 15.0% |
| !! | AATTATTCCTTGATTAATAA+AGG | - | chr1_4:6082343-6082362 | None:intergenic | 15.0% |
| !!! | TAATCGTTCTTTGTATTTTA+GGG | + | chr1_4:6076503-6076522 | Msa0146430:intron | 20.0% |
| !! | CGATAATAATACTACAAAAT+TGG | - | chr1_4:6076846-6076865 | None:intergenic | 20.0% |
| !! | TCATATCATAAAGTTAATCA+AGG | + | chr1_4:6077321-6077340 | Msa0146430:CDS | 20.0% |
| !!! | AAAAAATTTTGAGCTTAAAG+AGG | + | chr1_4:6078379-6078398 | Msa0146430:CDS | 20.0% |
| !!! | TACCAGTGTTTTTAATATAA+GGG | - | chr1_4:6078424-6078443 | None:intergenic | 20.0% |
| !! | AAAAATAAATATGACAAGTC+TGG | + | chr1_4:6080417-6080436 | Msa0146430:CDS | 20.0% |
| !! | TCAAGAAATAACAATCTAAA+AGG | - | chr1_4:6081093-6081112 | None:intergenic | 20.0% |
| !!! | ATTTTCATGTTGTTTAATGA+TGG | - | chr1_4:6081763-6081782 | None:intergenic | 20.0% |
| !!! | TGATAAATGTTTTCCATTTT+TGG | - | chr1_4:6081823-6081842 | None:intergenic | 20.0% |
| !!! | TTTTTCTCTCTAAACTTAAA+CGG | + | chr1_4:6081911-6081930 | Msa0146430:intron | 20.0% |
| !!! | TTATTTTAATTGATGTCTTC+AGG | + | chr1_4:6082064-6082083 | Msa0146430:intron | 20.0% |
| !!! | ACTTTTTTTTGGAAAAAATG+TGG | - | chr1_4:6082300-6082319 | None:intergenic | 20.0% |
| !!! | AATAGACAACAACTTTTTTT+TGG | - | chr1_4:6082311-6082330 | None:intergenic | 20.0% |
| !! | AAATAAGCCTTTATTAATCA+AGG | + | chr1_4:6082333-6082352 | Msa0146430:three_prime_UTR | 20.0% |
| !! | GTAATCGTTCTTTGTATTTT+AGG | + | chr1_4:6076502-6076521 | Msa0146430:intron | 25.0% |
| !! | TTTTGTAGTATTATTATCGG+AGG | + | chr1_4:6076847-6076866 | Msa0146430:intron | 25.0% |
| ! | TTTGTAGTATTATTATCGGA+GGG | + | chr1_4:6076848-6076867 | Msa0146430:intron | 25.0% |
| !! | ATATGACATATTGATCGTTT+TGG | - | chr1_4:6077307-6077326 | None:intergenic | 25.0% |
| !! | GATATGTTTTATGATGAAGA+AGG | + | chr1_4:6077618-6077637 | Msa0146430:CDS | 25.0% |
| ! | ATAAAACATATCAACAGAGT+CGG | - | chr1_4:6077610-6077629 | None:intergenic | 25.0% |
| ! | TTATCCAAATTATCTGTTAC+AGG | - | chr1_4:6077819-6077838 | None:intergenic | 25.0% |
| ! | TAGTATCAATTTGAAAGTCA+GGG | + | chr1_4:6078091-6078110 | Msa0146430:CDS | 25.0% |
| ! | AAGTTAACGAGATTAATACA+AGG | + | chr1_4:6078150-6078169 | Msa0146430:CDS | 25.0% |
| ! | ATTAATACAAGGCAAACATT+TGG | + | chr1_4:6078161-6078180 | Msa0146430:CDS | 25.0% |
| !!! | CTACCAGTGTTTTTAATATA+AGG | - | chr1_4:6078425-6078444 | None:intergenic | 25.0% |
| ! | CTTATATTAAAAACACTGGT+AGG | + | chr1_4:6078423-6078442 | Msa0146430:CDS | 25.0% |
| ! | ATCTGATCATACAATTGAAA+TGG | + | chr1_4:6078469-6078488 | Msa0146430:CDS | 25.0% |
| ! | TCATACAATTGAAATGGTTA+AGG | + | chr1_4:6078475-6078494 | Msa0146430:CDS | 25.0% |
| ! | TTGAAATGGTTAAGGAATAT+TGG | + | chr1_4:6078483-6078502 | Msa0146430:CDS | 25.0% |
| ! | TGAAATGGTTAAGGAATATT+GGG | + | chr1_4:6078484-6078503 | Msa0146430:CDS | 25.0% |
| !! | ATGGGAAAGAAAAAAAGTAT+TGG | + | chr1_4:6078755-6078774 | Msa0146430:CDS | 25.0% |
| ! | AAGATGGTAAAAAGACTAAA+TGG | + | chr1_4:6078789-6078808 | Msa0146430:CDS | 25.0% |
| !!! | GAATAGCTCTCAATATTTTT+TGG | - | chr1_4:6078835-6078854 | None:intergenic | 25.0% |
| ! | AAAAATATTGAGAGCTATTC+AGG | + | chr1_4:6078835-6078854 | Msa0146430:CDS | 25.0% |
| ! | CTTATTAATTCTGAATGATG+AGG | - | chr1_4:6078995-6079014 | None:intergenic | 25.0% |
| ! | TCATTCAGAATTAATAAGCA+TGG | + | chr1_4:6078997-6079016 | Msa0146430:CDS | 25.0% |
| ! | GATTTATGAAAGAAATGCAA+AGG | + | chr1_4:6079204-6079223 | Msa0146430:CDS | 25.0% |
| ! | TCAAACTGATCTAATTTATG+AGG | + | chr1_4:6079366-6079385 | Msa0146430:CDS | 25.0% |
| !! | ATACATATTTCTATAGACTC+AGG | - | chr1_4:6079856-6079875 | None:intergenic | 25.0% |
| ! | TGAGTCTATAGAAATATGTA+TGG | + | chr1_4:6079855-6079874 | Msa0146430:CDS | 25.0% |
| ! | AAAGAATAGAGAAAGAGAAA+AGG | + | chr1_4:6080104-6080123 | Msa0146430:CDS | 25.0% |
| !! | GTCAAAAGAACATTTTGAAT+GGG | + | chr1_4:6080226-6080245 | Msa0146430:CDS | 25.0% |
| ! | CCAATATGTACAAAAAACAT+GGG | - | chr1_4:6080739-6080758 | None:intergenic | 25.0% |
| ! | ACCAATATGTACAAAAAACA+TGG | - | chr1_4:6080740-6080759 | None:intergenic | 25.0% |
| ! | GAATATTGTGTTAGACAAAA+TGG | - | chr1_4:6080910-6080929 | None:intergenic | 25.0% |
| ! | ATCAGAGGTTATATTCTAAA+AGG | - | chr1_4:6081060-6081079 | None:intergenic | 25.0% |
| ! | AGAAATAACAATCTAAAAGG+AGG | - | chr1_4:6081090-6081109 | None:intergenic | 25.0% |
| ! | TTGATATATTGCATATGAAC+TGG | + | chr1_4:6081109-6081128 | Msa0146430:intron | 25.0% |
| ! | AACAATAAAGGAAAAATCCA+TGG | - | chr1_4:6081135-6081154 | None:intergenic | 25.0% |
| ! | GAAAGCTTCATTAACAATAA+AGG | - | chr1_4:6081147-6081166 | None:intergenic | 25.0% |
| ! | AAGGTAGTAGTATAAAGTAA+AGG | - | chr1_4:6081468-6081487 | None:intergenic | 25.0% |
| ! | TGCTATTGACAAAACTAAAA+AGG | - | chr1_4:6081492-6081511 | None:intergenic | 25.0% |
| !! | TTGGTAGATCTATTTTACTT+GGG | + | chr1_4:6081516-6081535 | Msa0146430:intron | 25.0% |
| !! | TTTTCTCTCTAAACTTAAAC+GGG | + | chr1_4:6081912-6081931 | Msa0146430:intron | 25.0% |
| ! | GGGTTAATATATGTTGTATT+CGG | + | chr1_4:6081932-6081951 | Msa0146430:intron | 25.0% |
| ! | GGTTAATATATGTTGTATTC+GGG | + | chr1_4:6081933-6081952 | Msa0146430:intron | 25.0% |
| !!! | GGGTTTTGTTCATTTTATTG+TGG | + | chr1_4:6076523-6076542 | Msa0146430:intron | 30.0% |
| !! | TGTTGTCTTTTCTGATTTGT+CGG | + | chr1_4:6076615-6076634 | Msa0146430:intron | 30.0% |
| TTAAGCAAAAGCTCTTCAAA+AGG | + | chr1_4:6076800-6076819 | Msa0146430:intron | 30.0% | |
| TAAGCAAAAGCTCTTCAAAA+GGG | + | chr1_4:6076801-6076820 | Msa0146430:intron | 30.0% | |
| TCTTATTAACATGTCATGAG+CGG | - | chr1_4:6076950-6076969 | None:intergenic | 30.0% | |
| ! | TAATTTGCAGCTTATAGCAT+AGG | - | chr1_4:6077108-6077127 | None:intergenic | 30.0% |
| AGATCGTGTTAATTCTTCAA+AGG | + | chr1_4:6077248-6077267 | Msa0146430:CDS | 30.0% | |
| TAATTCTTCAAAGGAAATCC+CGG | + | chr1_4:6077257-6077276 | Msa0146430:CDS | 30.0% | |
| GTTAATCAAGGAAGTGAAAA+TGG | + | chr1_4:6077333-6077352 | Msa0146430:CDS | 30.0% | |
| GAAGTGAAAATGGAACAAAT+GGG | + | chr1_4:6077343-6077362 | Msa0146430:CDS | 30.0% | |
| CAATTAAACAAGTGTAAGCA+GGG | - | chr1_4:6077398-6077417 | None:intergenic | 30.0% | |
| TCAATTAAACAAGTGTAAGC+AGG | - | chr1_4:6077399-6077418 | None:intergenic | 30.0% | |
| ! | ATGTTTTATGATGAAGAAGG+TGG | + | chr1_4:6077621-6077640 | Msa0146430:CDS | 30.0% |
| ! | GACTGTTTCTTGACATTATT+AGG | - | chr1_4:6077555-6077574 | None:intergenic | 30.0% |
| AAGAAACAGTCTTTCAACAA+TGG | + | chr1_4:6077687-6077706 | Msa0146430:CDS | 30.0% | |
| AGAGGCTCAAATGAAAATAA+AGG | + | chr1_4:6078007-6078026 | Msa0146430:CDS | 30.0% | |
| TCAATGAGAAGAAAGAAAGA+AGG | + | chr1_4:6078041-6078060 | Msa0146430:CDS | 30.0% | |
| CTAGTATCAATTTGAAAGTC+AGG | + | chr1_4:6078090-6078109 | Msa0146430:CDS | 30.0% | |
| TTTGAAAGTCAGGGAAAAAA+AGG | + | chr1_4:6078100-6078119 | Msa0146430:CDS | 30.0% | |
| GAGAAAGTAAGATCAGATAT+CGG | + | chr1_4:6078242-6078261 | Msa0146430:CDS | 30.0% | |
| AGAAAGTAAGATCAGATATC+GGG | + | chr1_4:6078243-6078262 | Msa0146430:CDS | 30.0% | |
| ! | GGAGACAATTTCAATTTGTT+CGG | - | chr1_4:6078311-6078330 | None:intergenic | 30.0% |
| GACCCTTATATTAAAAACAC+TGG | + | chr1_4:6078419-6078438 | Msa0146430:CDS | 30.0% | |
| ATTGTATGATCAGATTCTTC+AGG | - | chr1_4:6078464-6078483 | None:intergenic | 30.0% | |
| !! | GACACTTTTGTTTAGTTTCA+TGG | - | chr1_4:6078574-6078593 | None:intergenic | 30.0% |
| !! | TTAGTCTTTTTACCATCTTC+TGG | - | chr1_4:6078788-6078807 | None:intergenic | 30.0% |
| AAGTGAGAATAAAGTTGAAG+TGG | + | chr1_4:6078901-6078920 | Msa0146430:CDS | 30.0% | |
| GTTTAGAAGACAAAAAGAGA+AGG | + | chr1_4:6079044-6079063 | Msa0146430:CDS | 30.0% | |
| GTTTAGCAATATCAATGTCA+AGG | + | chr1_4:6079138-6079157 | Msa0146430:CDS | 30.0% | |
| TTTCATAAATCTCTTCATCG+TGG | - | chr1_4:6079195-6079214 | None:intergenic | 30.0% | |
| GTGATTTAAATGGAAATGTG+AGG | + | chr1_4:6079230-6079249 | Msa0146430:CDS | 30.0% | |
| AGATCACATGAATAAAACTC+TGG | - | chr1_4:6079523-6079542 | None:intergenic | 30.0% | |
| TTAGTAACTTGAACAGATTC+TGG | - | chr1_4:6079607-6079626 | None:intergenic | 30.0% | |
| ATTTGTGGAATCATTGTCAA+TGG | - | chr1_4:6079734-6079753 | None:intergenic | 30.0% | |
| AGAAATATGTATGGATGCAA+AGG | + | chr1_4:6079864-6079883 | Msa0146430:CDS | 30.0% | |
| ATCAATTCCCAGCAAAATAA+AGG | + | chr1_4:6079981-6080000 | Msa0146430:CDS | 30.0% | |
| ! | CGTCAAAAGAACATTTTGAA+TGG | + | chr1_4:6080225-6080244 | Msa0146430:CDS | 30.0% |
| ! | CATAGCTGAAAGATTTTGAA+TGG | - | chr1_4:6080494-6080513 | None:intergenic | 30.0% |
| CATTCAAAATCTTTCAGCTA+TGG | + | chr1_4:6080492-6080511 | Msa0146430:CDS | 30.0% | |
| !!! | CCCATGTTTTTTGTACATAT+TGG | + | chr1_4:6080736-6080755 | Msa0146430:intron | 30.0% |
| ! | AGAGGTTATATTCTAAAAGG+AGG | - | chr1_4:6081057-6081076 | None:intergenic | 30.0% |
| TCATTAAATACGCCAAATAC+TGG | + | chr1_4:6081419-6081438 | Msa0146430:intron | 30.0% | |
| CATTAAATACGCCAAATACT+GGG | + | chr1_4:6081420-6081439 | Msa0146430:intron | 30.0% | |
| ! | TTTAAAGCAAACCCAGTATT+TGG | - | chr1_4:6081434-6081453 | None:intergenic | 30.0% |
| TTGACAAAACTAAAAAGGCA+AGG | - | chr1_4:6081487-6081506 | None:intergenic | 30.0% | |
| ! | GTTTTGTCAATAGCATTTCT+TGG | + | chr1_4:6081497-6081516 | Msa0146430:intron | 30.0% |
| ! | CTTGGTAGATCTATTTTACT+TGG | + | chr1_4:6081515-6081534 | Msa0146430:intron | 30.0% |
| ! | ACTATTGCTGTTAAAGGAAT+TGG | - | chr1_4:6081598-6081617 | None:intergenic | 30.0% |
| ! | GAAGGTTTTTGATCTTCTAA+AGG | + | chr1_4:6081723-6081742 | Msa0146430:CDS | 30.0% |
| ! | TTTGATCTTCTAAAGGTTTG+TGG | + | chr1_4:6081730-6081749 | Msa0146430:intron | 30.0% |
| !! | TTCCATTTTTGGAGAAAGAA+CGG | - | chr1_4:6081812-6081831 | None:intergenic | 30.0% |
| ATCAATAGCATAACTCGTTA+AGG | - | chr1_4:6081852-6081871 | None:intergenic | 30.0% | |
| AATTTCAACCTCAATCACAA+TGG | + | chr1_4:6081877-6081896 | Msa0146430:intron | 30.0% | |
| ATATATGTTGTATTCGGGAT+TGG | + | chr1_4:6081938-6081957 | Msa0146430:intron | 30.0% | |
| TATATGTTGTATTCGGGATT+GGG | + | chr1_4:6081939-6081958 | Msa0146430:intron | 30.0% | |
| ! | AAAGGTCACTTTCAAACATA+AGG | - | chr1_4:6081987-6082006 | None:intergenic | 30.0% |
| !! | AGTGACCTTTTGAAAAATAC+AGG | + | chr1_4:6081997-6082016 | Msa0146430:intron | 30.0% |
| !! | GTGACCTTTTGAAAAATACA+GGG | + | chr1_4:6081998-6082017 | Msa0146430:intron | 30.0% |
| !! | CTTACCCTGTATTTTTCAAA+AGG | - | chr1_4:6082005-6082024 | None:intergenic | 30.0% |
| !! | TGAGCTTACTTTTCATTGAA+CGG | - | chr1_4:6082190-6082209 | None:intergenic | 30.0% |
| ATGAAGTAGGCAAATTTAGA+AGG | + | chr1_4:6082217-6082236 | Msa0146430:three_prime_UTR | 30.0% | |
| ! | AATTGATTGTTTTCACCTAC+AGG | - | chr1_4:6082243-6082262 | None:intergenic | 30.0% |
| TTCAAACCTCGATTACTCTA+AGG | + | chr1_4:6076384-6076403 | Msa0146430:CDS | 35.0% | |
| TTCGGAATCAGTTCTTCAAA+AGG | - | chr1_4:6076445-6076464 | None:intergenic | 35.0% | |
| TCGTTTATTTGCATGTGTGT+TGG | + | chr1_4:6076554-6076573 | Msa0146430:intron | 35.0% | |
| AAGCAAAAGCTCTTCAAAAG+GGG | + | chr1_4:6076802-6076821 | Msa0146430:intron | 35.0% | |
| ! | CACTTGTTAAAGAGTTTGAG+AGG | + | chr1_4:6076913-6076932 | Msa0146430:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | - | chr1_4:6077000-6077019 | None:intergenic | 35.0% |
| TCTAAGCATCTCACAAGTTA+TGG | - | chr1_4:6077144-6077163 | None:intergenic | 35.0% | |
| TGAGATGCTTAGAATACAGA+CGG | + | chr1_4:6077151-6077170 | Msa0146430:intron | 35.0% | |
| CCTATAGAATAACACATGTC+AGG | - | chr1_4:6077193-6077212 | None:intergenic | 35.0% | |
| ! | CCTGACATGTGTTATTCTAT+AGG | + | chr1_4:6077190-6077209 | Msa0146430:intron | 35.0% |
| TATAGGAGCAAAGTCAAAAG+TGG | + | chr1_4:6077207-6077226 | Msa0146430:intron | 35.0% | |
| TTGAATGAAGGTGATATCAC+CGG | - | chr1_4:6077279-6077298 | None:intergenic | 35.0% | |
| GTGATATCACCTTCATTCAA+TGG | + | chr1_4:6077279-6077298 | Msa0146430:CDS | 35.0% | |
| GGAAGTGAAAATGGAACAAA+TGG | + | chr1_4:6077342-6077361 | Msa0146430:CDS | 35.0% | |
| AAGAAACAGTCTTCCAACAA+TGG | + | chr1_4:6077564-6077583 | Msa0146430:CDS | 35.0% | |
| TGACATTATTAGGTGAAGCA+TGG | - | chr1_4:6077668-6077687 | None:intergenic | 35.0% | |
| AAACAGTCTTTCAACAATGG+AGG | + | chr1_4:6077690-6077709 | Msa0146430:CDS | 35.0% | |
| AACAGTCTTTCAACAATGGA+GGG | + | chr1_4:6077691-6077710 | Msa0146430:CDS | 35.0% | |
| ACAGCCTGTAACAGATAATT+TGG | + | chr1_4:6077812-6077831 | Msa0146430:CDS | 35.0% | |
| CATTGATACTTCGAGATCAA+CGG | + | chr1_4:6077848-6077867 | Msa0146430:CDS | 35.0% | |
| TTTAAGGAAGGCAATAGAAG+AGG | + | chr1_4:6077989-6078008 | Msa0146430:CDS | 35.0% | |
| AAGGCAAACATTTGGAGAAA+TGG | + | chr1_4:6078169-6078188 | Msa0146430:CDS | 35.0% | |
| CTTACTTTCTCTGTTCTCAT+TGG | - | chr1_4:6078233-6078252 | None:intergenic | 35.0% | |
| GAAAGTAAGATCAGATATCG+GGG | + | chr1_4:6078244-6078263 | Msa0146430:CDS | 35.0% | |
| ATTGTCTCCAGACAAACATA+AGG | + | chr1_4:6078322-6078341 | Msa0146430:CDS | 35.0% | |
| ! | AATTTTGAGCTTAAAGAGGC+AGG | + | chr1_4:6078383-6078402 | Msa0146430:CDS | 35.0% |
| !! | AGATTCTTCAGGTTTTTCAG+TGG | - | chr1_4:6078453-6078472 | None:intergenic | 35.0% |
| GCAGTTAATGAAGCAAGTTA+TGG | + | chr1_4:6078536-6078555 | Msa0146430:CDS | 35.0% | |
| AGTTGAAGAAGTTGAGAACA+AGG | + | chr1_4:6078673-6078692 | Msa0146430:CDS | 35.0% | |
| ACACCGTTTAATGAACCAAA+AGG | + | chr1_4:6078698-6078717 | Msa0146430:CDS | 35.0% | |
| !!! | GAGCCTTTTGGTTCATTAAA+CGG | - | chr1_4:6078704-6078723 | None:intergenic | 35.0% |
| ! | AGGTTAATTACAGAGCCTTT+TGG | - | chr1_4:6078716-6078735 | None:intergenic | 35.0% |
| AAAGGCTCTGTAATTAACCT+AGG | + | chr1_4:6078716-6078735 | Msa0146430:CDS | 35.0% | |
| AAAAAGAGAAGGAATGCATC+TGG | + | chr1_4:6079055-6079074 | Msa0146430:CDS | 35.0% | |
| TTCTTGGGATGTAAATCAAG+AGG | + | chr1_4:6079078-6079097 | Msa0146430:CDS | 35.0% | |
| AAGAGGTAGAACATTCCTAT+TGG | + | chr1_4:6079095-6079114 | Msa0146430:CDS | 35.0% | |
| ATTGCTAAACGTACTATCAG+TGG | - | chr1_4:6079128-6079147 | None:intergenic | 35.0% | |
| TATCAATGTCAAGGAAACAC+TGG | + | chr1_4:6079147-6079166 | Msa0146430:CDS | 35.0% | |
| GCAAAGGCTAGTGATTTAAA+TGG | + | chr1_4:6079220-6079239 | Msa0146430:CDS | 35.0% | |
| TTCAACTTCTCAGTTTCATC+TGG | - | chr1_4:6079445-6079464 | None:intergenic | 35.0% | |
| TGAGAAGTTGAACAAAACAC+AGG | + | chr1_4:6079453-6079472 | Msa0146430:CDS | 35.0% | |
| !! | GTTTTATTCATGTGATCTGC+AGG | + | chr1_4:6079525-6079544 | Msa0146430:CDS | 35.0% |
| TGATCTGCAGGATGATATAA+TGG | + | chr1_4:6079537-6079556 | Msa0146430:CDS | 35.0% | |
| GACAATGATTCCACAAATGT+TGG | + | chr1_4:6079736-6079755 | Msa0146430:CDS | 35.0% | |
| AATATGTATGGATGCAAAGG+AGG | + | chr1_4:6079867-6079886 | Msa0146430:CDS | 35.0% | |
| !!! | TGACTCTCCTTTATTTTGCT+GGG | - | chr1_4:6079991-6080010 | None:intergenic | 35.0% |
| !!! | ATGACTCTCCTTTATTTTGC+TGG | - | chr1_4:6079992-6080011 | None:intergenic | 35.0% |
| TTTCTCATTTGCTTGACAAG+TGG | - | chr1_4:6080268-6080287 | None:intergenic | 35.0% | |
| TCAAGCAAATGAGAAAACAC+CGG | + | chr1_4:6080272-6080291 | Msa0146430:CDS | 35.0% | |
| AGCAATGGAACAAAGCAAAA+CGG | + | chr1_4:6080468-6080487 | Msa0146430:CDS | 35.0% | |
| TCAAAATCTTTCAGCTATGG+TGG | + | chr1_4:6080495-6080514 | Msa0146430:CDS | 35.0% | |
| AGTTCCACTTTACCTGATAT+CGG | + | chr1_4:6080533-6080552 | Msa0146430:intron | 35.0% | |
| !! | AAAAAGAAGGTACCGATATC+AGG | - | chr1_4:6080548-6080567 | None:intergenic | 35.0% |
| CAAAAAACATGGGCAAAACA+AGG | - | chr1_4:6080729-6080748 | None:intergenic | 35.0% | |
| TAACGTAGAACAGTGATTGT+TGG | - | chr1_4:6080780-6080799 | None:intergenic | 35.0% | |
| ! | ACTTGACCACCTTTTAACAT+CGG | - | chr1_4:6080965-6080984 | None:intergenic | 35.0% |
| ATGTTAAAAGGTGGTCAAGT+GGG | + | chr1_4:6080965-6080984 | Msa0146430:CDS | 35.0% | |
| ! | AAAGGAGGTATATTCATCAG+AGG | - | chr1_4:6081075-6081094 | None:intergenic | 35.0% |
| AAGCTTTCCTTGTAAACTTC+AGG | + | chr1_4:6081159-6081178 | Msa0146430:intron | 35.0% | |
| AGCTTTCCTTGTAAACTTCA+GGG | + | chr1_4:6081160-6081179 | Msa0146430:intron | 35.0% | |
| TATCTGTGGAGTCTATAACT+TGG | + | chr1_4:6081259-6081278 | Msa0146430:intron | 35.0% | |
| AGTCTATAACTTGGCTGATA+TGG | + | chr1_4:6081268-6081287 | Msa0146430:intron | 35.0% | |
| ! | GTGGTTACTATTGCTGTTAA+AGG | - | chr1_4:6081604-6081623 | None:intergenic | 35.0% |
| TAAGAGAACCATTGTGATTG+AGG | - | chr1_4:6081888-6081907 | None:intergenic | 35.0% | |
| TGGGATCAATTTGACTAACA+TGG | + | chr1_4:6081958-6081977 | Msa0146430:intron | 35.0% | |
| ACAGATTCAACATGGAAGAA+AGG | + | chr1_4:6082096-6082115 | Msa0146430:CDS | 35.0% | |
| ATGTTAATTGTGCTTCCTGA+TGG | + | chr1_4:6082129-6082148 | Msa0146430:three_prime_UTR | 35.0% | |
| AGCTCATGTTTGTATGAAGT+AGG | + | chr1_4:6082204-6082223 | Msa0146430:three_prime_UTR | 35.0% | |
| ! | CTTCTTTGTTAGTGTTGAGG+TGG | - | chr1_4:6076167-6076186 | None:intergenic | 40.0% |
| GTGCTTCTTTGTTAGTGTTG+AGG | - | chr1_4:6076170-6076189 | None:intergenic | 40.0% | |
| ! | CTTGGAGTTCTTAGCTTGAT+TGG | - | chr1_4:6076247-6076266 | None:intergenic | 40.0% |
| TCAATTCGACGATTACAACG+AGG | + | chr1_4:6076273-6076292 | Msa0146430:CDS | 40.0% | |
| ! | GACGATTACAACGAGGTTTT+CGG | + | chr1_4:6076280-6076299 | Msa0146430:CDS | 40.0% |
| TGAAGACCTTAGAGTAATCG+AGG | - | chr1_4:6076393-6076412 | None:intergenic | 40.0% | |
| !! | GATTACTCTAAGGTCTTCAG+CGG | + | chr1_4:6076394-6076413 | Msa0146430:CDS | 40.0% |
| AGCAAAAGCTCTTCAAAAGG+GGG | + | chr1_4:6076803-6076822 | Msa0146430:intron | 40.0% | |
| TTATTATCGGAGGGTCAGTT+TGG | + | chr1_4:6076857-6076876 | Msa0146430:intron | 40.0% | |
| ! | TGTCATGAGCGGTTTTCATA+AGG | - | chr1_4:6076939-6076958 | None:intergenic | 40.0% |
| AATACAGACGGTGACCTTAA+TGG | + | chr1_4:6077163-6077182 | Msa0146430:intron | 40.0% | |
| ACATGTCAGGAACACCATTA+AGG | - | chr1_4:6077180-6077199 | None:intergenic | 40.0% | |
| TGAATGAAGGTGATATCACC+GGG | - | chr1_4:6077278-6077297 | None:intergenic | 40.0% | |
| !!! | GTTTTGGCTCCATTGAATGA+AGG | - | chr1_4:6077291-6077310 | None:intergenic | 40.0% |
| TAAAGACGAGCAGAGCTAAA+TGG | + | chr1_4:6077433-6077452 | Msa0146430:CDS | 40.0% | |
| TTCTGGTATTCATTGTGACG+AGG | + | chr1_4:6077482-6077501 | Msa0146430:CDS | 40.0% | |
| TCTGGTATTCATTGTGACGA+GGG | + | chr1_4:6077483-6077502 | Msa0146430:CDS | 40.0% | |
| AAACAGTCTTCCAACAATGG+AGG | + | chr1_4:6077567-6077586 | Msa0146430:CDS | 40.0% | |
| AACAGTCTTCCAACAATGGA+GGG | + | chr1_4:6077568-6077587 | Msa0146430:CDS | 40.0% | |
| TATAGCTTTCCCTCCATTGT+TGG | - | chr1_4:6077580-6077599 | None:intergenic | 40.0% | |
| TTATCTGTTACAGGCTGTGA+AGG | - | chr1_4:6077810-6077829 | None:intergenic | 40.0% | |
| !! | ACTTTGAGATGCTTGGCATT+TGG | - | chr1_4:6077877-6077896 | None:intergenic | 40.0% |
| AAATGCCAAGCATCTCAAAG+TGG | + | chr1_4:6077876-6077895 | Msa0146430:CDS | 40.0% | |
| !! | TTCTGTAGCTGCTTTAAGGA+AGG | + | chr1_4:6077977-6077996 | Msa0146430:CDS | 40.0% |
| GACTTCTGTTTGACATGATC+AGG | - | chr1_4:6078071-6078090 | None:intergenic | 40.0% | |
| ATCAGAAGAAACTTGCAGCA+AGG | - | chr1_4:6078198-6078217 | None:intergenic | 40.0% | |
| CTGCAAGTTTCTTCTGATGT+AGG | + | chr1_4:6078200-6078219 | Msa0146430:CDS | 40.0% | |
| !! | TTTGTTCGGTGCTTCTTGTA+CGG | - | chr1_4:6078297-6078316 | None:intergenic | 40.0% |
| TCCAGACAAACATAAGGAAG+AGG | + | chr1_4:6078328-6078347 | Msa0146430:CDS | 40.0% | |
| ACCTCTTCCTTATGTTTGTC+TGG | - | chr1_4:6078332-6078351 | None:intergenic | 40.0% | |
| CTGAAAGAAGCAGATCATGA+AGG | + | chr1_4:6078356-6078375 | Msa0146430:CDS | 40.0% | |
| !! | CAAAAGTGTCAAGAAGTTGC+TGG | + | chr1_4:6078584-6078603 | Msa0146430:CDS | 40.0% |
| TGGTGAAACAAACCTGATTC+AGG | + | chr1_4:6078604-6078623 | Msa0146430:CDS | 40.0% | |
| GCTCTGTAATTAACCTAGGT+GGG | + | chr1_4:6078720-6078739 | Msa0146430:CDS | 40.0% | |
| ATTGGCTATAAGCCAGAAGA+TGG | + | chr1_4:6078773-6078792 | Msa0146430:CDS | 40.0% | |
| GACTAAATGGTCCATTGATC+AGG | + | chr1_4:6078802-6078821 | Msa0146430:CDS | 40.0% | |
| TTGGCATTCTTCCTGATCAA+TGG | - | chr1_4:6078816-6078835 | None:intergenic | 40.0% | |
| TTGAGAGCTATTCAGGAACT+TGG | + | chr1_4:6078842-6078861 | Msa0146430:CDS | 40.0% | |
| GCTATTCAGGAACTTGGAAA+TGG | + | chr1_4:6078848-6078867 | Msa0146430:CDS | 40.0% | |
| ATGTGAATTGACAGAGTCTC+CGG | + | chr1_4:6078940-6078959 | Msa0146430:CDS | 40.0% | |
| !! | AAGGAATGCATCTGGTTCTT+GGG | + | chr1_4:6079063-6079082 | Msa0146430:CDS | 40.0% |
| TCTCTTCATCGTGGTGAATA+TGG | - | chr1_4:6079186-6079205 | None:intergenic | 40.0% | |
| !! | GAGGTCATTTTCACAAGCAT+GGG | - | chr1_4:6079266-6079285 | None:intergenic | 40.0% |
| ! | ATTTTCTTCCATAGGGTGTG+TGG | - | chr1_4:6079296-6079315 | None:intergenic | 40.0% |
| ! | CACTCGCATTTTCTTCCATA+GGG | - | chr1_4:6079303-6079322 | None:intergenic | 40.0% |
| ! | TCACTCGCATTTTCTTCCAT+AGG | - | chr1_4:6079304-6079323 | None:intergenic | 40.0% |
| TGGAAGAAAATGCGAGTGAA+AGG | + | chr1_4:6079305-6079324 | Msa0146430:CDS | 40.0% | |
| GAGTGAAAGGAAAGACAACA+AGG | + | chr1_4:6079318-6079337 | Msa0146430:CDS | 40.0% | |
| TGAAAGGAAAGACAACAAGG+TGG | + | chr1_4:6079321-6079340 | Msa0146430:CDS | 40.0% | |
| GGAGATAAGAGAAGAAGAAC+CGG | + | chr1_4:6079387-6079406 | Msa0146430:CDS | 40.0% | |
| GAGATAAGAGAAGAAGAACC+GGG | + | chr1_4:6079388-6079407 | Msa0146430:CDS | 40.0% | |
| ATAGCTAGAACTGGATTCTG+AGG | - | chr1_4:6079419-6079438 | None:intergenic | 40.0% | |
| ! | ATCTGGTTCATAGCTAGAAC+TGG | - | chr1_4:6079428-6079447 | None:intergenic | 40.0% |
| CAGGATGATATAATGGTCAC+AGG | + | chr1_4:6079544-6079563 | Msa0146430:CDS | 40.0% | |
| CTTCATCAAAGTCAGAAGTC+TGG | - | chr1_4:6079654-6079673 | None:intergenic | 40.0% | |
| CAGACTTCTGACTTTGATGA+AGG | + | chr1_4:6079652-6079671 | Msa0146430:CDS | 40.0% | |
| ACACTGTTTCACTGAGTACA+GGG | - | chr1_4:6079681-6079700 | None:intergenic | 40.0% | |
| TACACTGTTTCACTGAGTAC+AGG | - | chr1_4:6079682-6079701 | None:intergenic | 40.0% | |
| GTCAGTTTCACCAACATTTG+TGG | - | chr1_4:6079749-6079768 | None:intergenic | 40.0% | |
| ! | TGTTGGTGAAACTGACATGA+AGG | + | chr1_4:6079753-6079772 | Msa0146430:CDS | 40.0% |
| GTGAAACTGACATGAAGGTT+AGG | + | chr1_4:6079758-6079777 | Msa0146430:CDS | 40.0% | |
| GCAAAACCAAGATCAGTGTT+TGG | + | chr1_4:6079780-6079799 | Msa0146430:CDS | 40.0% | |
| ! | CCTTTTCCAAACACTGATCT+TGG | - | chr1_4:6079789-6079808 | None:intergenic | 40.0% |
| CCAAGATCAGTGTTTGGAAA+AGG | + | chr1_4:6079786-6079805 | Msa0146430:CDS | 40.0% | |
| TCAGATACCCTTCAAAGAAG+AGG | + | chr1_4:6079951-6079970 | Msa0146430:CDS | 40.0% | |
| TTCACCTCCTCTTCTTTGAA+GGG | - | chr1_4:6079961-6079980 | None:intergenic | 40.0% | |
| TTTCACCTCCTCTTCTTTGA+AGG | - | chr1_4:6079962-6079981 | None:intergenic | 40.0% | |
| TCATCAAACATCCGTGACAA+AGG | + | chr1_4:6080008-6080027 | Msa0146430:CDS | 40.0% | |
| TTCCTTCACTTCCTTTGTCA+CGG | - | chr1_4:6080022-6080041 | None:intergenic | 40.0% | |
| TACCTTCTGTGACTTACCAT+TGG | - | chr1_4:6080046-6080065 | None:intergenic | 40.0% | |
| AATTCGTGAAGCTCGTGAAA+GGG | + | chr1_4:6080149-6080168 | Msa0146430:CDS | 40.0% | |
| ! | ATTTGCTGATGCAAGAGAGA+GGG | + | chr1_4:6080173-6080192 | Msa0146430:CDS | 40.0% |
| ! | ACATTTTGAATGGGCGAGAA+AGG | + | chr1_4:6080235-6080254 | Msa0146430:CDS | 40.0% |
| ! | TTGCTTTGTTCCATTGCTTC+TGG | - | chr1_4:6080466-6080485 | None:intergenic | 40.0% |
| ! | TCTGAAGTTCGTGATTCTAC+TGG | + | chr1_4:6080613-6080632 | Msa0146430:intron | 40.0% |
| CTGAAGTTCGTGATTCTACT+GGG | + | chr1_4:6080614-6080633 | Msa0146430:intron | 40.0% | |
| TGAAGTTCGTGATTCTACTG+GGG | + | chr1_4:6080615-6080634 | Msa0146430:intron | 40.0% | |
| ATCACTGTTCTACGTTATGC+AGG | + | chr1_4:6080783-6080802 | Msa0146430:intron | 40.0% | |
| ! | TCGATCACGCATACTCTTTT+CGG | - | chr1_4:6080821-6080840 | None:intergenic | 40.0% |
| ACAATATTCGTTCCTGCAGA+GGG | + | chr1_4:6080921-6080940 | Msa0146430:intron | 40.0% | |
| GATGTTAAAAGGTGGTCAAG+TGG | + | chr1_4:6080964-6080983 | Msa0146430:CDS | 40.0% | |
| TATTGCATATGAACTGGCCA+TGG | + | chr1_4:6081115-6081134 | Msa0146430:intron | 40.0% | |
| GCTTTCCTTGTAAACTTCAG+GGG | + | chr1_4:6081161-6081180 | Msa0146430:intron | 40.0% | |
| TTACTCCCCTGAAGTTTACA+AGG | - | chr1_4:6081169-6081188 | None:intergenic | 40.0% | |
| TTCGAGACTCGAATGAACAA+TGG | + | chr1_4:6081217-6081236 | Msa0146430:intron | 40.0% | |
| TCGAGACTCGAATGAACAAT+GGG | + | chr1_4:6081218-6081237 | Msa0146430:intron | 40.0% | |
| TAGACTCCACAGATAAGCAA+GGG | - | chr1_4:6081254-6081273 | None:intergenic | 40.0% | |
| ATAGACTCCACAGATAAGCA+AGG | - | chr1_4:6081255-6081274 | None:intergenic | 40.0% | |
| ACTTGAATTTCGCAGATCCT+TGG | + | chr1_4:6081553-6081572 | Msa0146430:intron | 40.0% | |
| CTTGAATTTCGCAGATCCTT+GGG | + | chr1_4:6081554-6081573 | Msa0146430:intron | 40.0% | |
| AATTGGTTGCCAACCACTAT+CGG | - | chr1_4:6081581-6081600 | None:intergenic | 40.0% | |
| AGCTTTCTTTACATCAGGTG+TGG | - | chr1_4:6081623-6081642 | None:intergenic | 40.0% | |
| CGGTAAGCTTTCTTTACATC+AGG | - | chr1_4:6081628-6081647 | None:intergenic | 40.0% | |
| ! | GCAAAAGTACACTTGTGAGA+AGG | + | chr1_4:6081705-6081724 | Msa0146430:CDS | 40.0% |
| TTGGAGAAAGAACGGTCAAT+GGG | - | chr1_4:6081804-6081823 | None:intergenic | 40.0% | |
| TTTGGAGAAAGAACGGTCAA+TGG | - | chr1_4:6081805-6081824 | None:intergenic | 40.0% | |
| GACCGTTCTTTCTCCAAAAA+TGG | + | chr1_4:6081807-6081826 | Msa0146430:intron | 40.0% | |
| ATTGATGTCTTCAGGAAGCA+TGG | + | chr1_4:6082072-6082091 | Msa0146430:intron | 40.0% | |
| AGCATGGAACAGATTCAACA+TGG | + | chr1_4:6082088-6082107 | Msa0146430:CDS | 40.0% | |
| TCGTCGAATTGAGAGAAGCT+TGG | - | chr1_4:6076265-6076284 | None:intergenic | 45.0% | |
| GATTCCGATTCTCGAACTTC+CGG | + | chr1_4:6076324-6076343 | Msa0146430:CDS | 45.0% | |
| ATTCTCCTTTCCTTGAGCTC+CGG | - | chr1_4:6076346-6076365 | None:intergenic | 45.0% | |
| ! | CGTTTCGATGCTTTAGGCTT+CGG | - | chr1_4:6076463-6076482 | None:intergenic | 45.0% |
| !! | CGAAGCCTAAAGCATCGAAA+CGG | + | chr1_4:6076461-6076480 | Msa0146430:CDS | 45.0% |
| ACTCACCGTTTCGATGCTTT+AGG | - | chr1_4:6076469-6076488 | None:intergenic | 45.0% | |
| ATGGTCTATACCAGCAGCAA+AGG | + | chr1_4:6077452-6077471 | Msa0146430:CDS | 45.0% | |
| !! | GAAAAAGCATCCTTTGCTGC+TGG | - | chr1_4:6077465-6077484 | None:intergenic | 45.0% |
| !!! | GCAGCAAAGGATGCTTTTTC+TGG | + | chr1_4:6077465-6077484 | Msa0146430:CDS | 45.0% |
| CTGGTATTCATTGTGACGAG+GGG | + | chr1_4:6077484-6077503 | Msa0146430:CDS | 45.0% | |
| TGTGACGAGGGGATAAAAGA+AGG | + | chr1_4:6077495-6077514 | Msa0146430:CDS | 45.0% | |
| !! | ATGTGCCACTTTGAGATGCT+TGG | - | chr1_4:6077884-6077903 | None:intergenic | 45.0% |
| TTCTAGGTACGTCGGTGAAT+CGG | - | chr1_4:6077925-6077944 | None:intergenic | 45.0% | |
| TTGAGTCAACCGTGTCTTCT+AGG | - | chr1_4:6077941-6077960 | None:intergenic | 45.0% | |
| ! | CACGGTTGACTCAAATTCAG+CGG | + | chr1_4:6077947-6077966 | Msa0146430:CDS | 45.0% |
| ! | CAGCTTCTGTAGCTGCTTTA+AGG | + | chr1_4:6077973-6077992 | Msa0146430:CDS | 45.0% |
| GGTTAAGGAATATTGGGAGC+AGG | + | chr1_4:6078490-6078509 | Msa0146430:CDS | 45.0% | |
| GAATATTGGGAGCAGGAGAA+TGG | + | chr1_4:6078497-6078516 | Msa0146430:CDS | 45.0% | |
| GCAGGAGAATGGTGAAGAAA+AGG | + | chr1_4:6078508-6078527 | Msa0146430:CDS | 45.0% | |
| AGTGACAGACAAGAGGTTGA+AGG | + | chr1_4:6078643-6078662 | Msa0146430:CDS | 45.0% | |
| GGCTCTGTAATTAACCTAGG+TGG | + | chr1_4:6078719-6078738 | Msa0146430:CDS | 45.0% | |
| TCCGGAGCTATTAGACAATG+AGG | + | chr1_4:6078958-6078977 | Msa0146430:CDS | 45.0% | |
| CCCTCATTGTCTAATAGCTC+CGG | - | chr1_4:6078962-6078981 | None:intergenic | 45.0% | |
| CCGGAGCTATTAGACAATGA+GGG | + | chr1_4:6078959-6078978 | Msa0146430:CDS | 45.0% | |
| CGGAGCTATTAGACAATGAG+GGG | + | chr1_4:6078960-6078979 | Msa0146430:CDS | 45.0% | |
| TCTGAATGATGAGGACTGCA+CGG | - | chr1_4:6078986-6079005 | None:intergenic | 45.0% | |
| !! | GAAGGAATGCATCTGGTTCT+TGG | + | chr1_4:6079062-6079081 | Msa0146430:CDS | 45.0% |
| ATCAGTGGCTTCTCTCCAAT+AGG | - | chr1_4:6079113-6079132 | None:intergenic | 45.0% | |
| CAATGTCAAGGAAACACTGG+AGG | + | chr1_4:6079150-6079169 | Msa0146430:CDS | 45.0% | |
| !! | CGAGGTCATTTTCACAAGCA+TGG | - | chr1_4:6079267-6079286 | None:intergenic | 45.0% |
| TGCTTGTGAAAATGACCTCG+AGG | + | chr1_4:6079267-6079286 | Msa0146430:CDS | 45.0% | |
| GCTTGTGAAAATGACCTCGA+GGG | + | chr1_4:6079268-6079287 | Msa0146430:CDS | 45.0% | |
| GATTTCTGCGAGAAACATGC+AGG | + | chr1_4:6079628-6079647 | Msa0146430:CDS | 45.0% | |
| CACTGTTTCACTGAGTACAG+GGG | - | chr1_4:6079680-6079699 | None:intergenic | 45.0% | |
| TGTGTCAGATGAAGAGATCG+AGG | + | chr1_4:6079897-6079916 | Msa0146430:CDS | 45.0% | |
| CTGAGATGCTTCACAAGAAG+AGG | - | chr1_4:6079935-6079954 | None:intergenic | 45.0% | |
| GATACCCTTCAAAGAAGAGG+AGG | + | chr1_4:6079954-6079973 | Msa0146430:CDS | 45.0% | |
| ATCCGTGACAAAGGAAGTGA+AGG | + | chr1_4:6080017-6080036 | Msa0146430:CDS | 45.0% | |
| AAGGAAGTGAAGGAAGCCAA+TGG | + | chr1_4:6080027-6080046 | Msa0146430:CDS | 45.0% | |
| AGCCAATGGTAAGTCACAGA+AGG | + | chr1_4:6080041-6080060 | Msa0146430:CDS | 45.0% | |
| TGGTAAGTCACAGAAGGTAG+AGG | + | chr1_4:6080047-6080066 | Msa0146430:CDS | 45.0% | |
| TAAGTCACAGAAGGTAGAGG+TGG | + | chr1_4:6080050-6080069 | Msa0146430:CDS | 45.0% | |
| ACAGAAGGTAGAGGTGGATA+GGG | + | chr1_4:6080056-6080075 | Msa0146430:CDS | 45.0% | |
| CAATTCGTGAAGCTCGTGAA+AGG | + | chr1_4:6080148-6080167 | Msa0146430:CDS | 45.0% | |
| ! | CATTTGCTGATGCAAGAGAG+AGG | + | chr1_4:6080172-6080191 | Msa0146430:CDS | 45.0% |
| ! | TCTGGTCCAGAGAAGTATGT+TGG | + | chr1_4:6080435-6080454 | Msa0146430:CDS | 45.0% |
| GATGCACCAACATACTTCTC+TGG | - | chr1_4:6080444-6080463 | None:intergenic | 45.0% | |
| !! | GGTACCGATATCAGGTAAAG+TGG | - | chr1_4:6080540-6080559 | None:intergenic | 45.0% |
| GATTCTACTGGGGTCTTTGA+TGG | + | chr1_4:6080625-6080644 | Msa0146430:CDS | 45.0% | |
| CTGCTCAGAGATGTAAAGCT+AGG | + | chr1_4:6080662-6080681 | Msa0146430:CDS | 45.0% | |
| TCCTATTCTCTGATGCCTCT+CGG | - | chr1_4:6080689-6080708 | None:intergenic | 45.0% | |
| TCAGAGAATAGGAGAACGTG+TGG | + | chr1_4:6080696-6080715 | Msa0146430:CDS | 45.0% | |
| GAATAGGAGAACGTGTGGTA+TGG | + | chr1_4:6080701-6080720 | Msa0146430:intron | 45.0% | |
| GTTCTACGTTATGCAGGCAA+AGG | + | chr1_4:6080789-6080808 | Msa0146430:intron | 45.0% | |
| CACAATATTCGTTCCTGCAG+AGG | + | chr1_4:6080920-6080939 | Msa0146430:intron | 45.0% | |
| CTCTCGATGCCGATGTTAAA+AGG | + | chr1_4:6080953-6080972 | Msa0146430:CDS | 45.0% | |
| TCGATGCCGATGTTAAAAGG+TGG | + | chr1_4:6080956-6080975 | Msa0146430:CDS | 45.0% | |
| TAAAAGGTGGTCAAGTGGGA+AGG | + | chr1_4:6080969-6080988 | Msa0146430:CDS | 45.0% | |
| CGAGACTCGAATGAACAATG+GGG | + | chr1_4:6081219-6081238 | Msa0146430:intron | 45.0% | |
| GAGACTCGAATGAACAATGG+GGG | + | chr1_4:6081220-6081239 | Msa0146430:intron | 45.0% | |
| AGACTCGAATGAACAATGGG+GGG | + | chr1_4:6081221-6081240 | Msa0146430:intron | 45.0% | |
| ! | AGAGTACCCTTGCTTATCTG+TGG | + | chr1_4:6081245-6081264 | Msa0146430:intron | 45.0% |
| ATTGGTTGCCAACCACTATC+GGG | - | chr1_4:6081580-6081599 | None:intergenic | 45.0% | |
| ! | GCACACAAAGAGTGGCTTTA+CGG | - | chr1_4:6081648-6081667 | None:intergenic | 45.0% |
| GGCAAATTTAGAAGGCCTGT+AGG | + | chr1_4:6082225-6082244 | Msa0146430:three_prime_UTR | 45.0% | |
| GTAAGCAGATCTTCCGGTGA+CGG | - | chr1_4:6076206-6076225 | None:intergenic | 50.0% | |
| ACCGGAAGATCTGCTTACGA+CGG | + | chr1_4:6076208-6076227 | Msa0146430:CDS | 50.0% | |
| AGCTCCGGAAGTTCGAGAAT+CGG | - | chr1_4:6076331-6076350 | None:intergenic | 50.0% | |
| AACTTCCGGAGCTCAAGGAA+AGG | + | chr1_4:6076338-6076357 | Msa0146430:CDS | 50.0% | |
| GGAGCTCAAGGAAAGGAGAA+TGG | + | chr1_4:6076345-6076364 | Msa0146430:CDS | 50.0% | |
| AAGTGTAAGCAGGGACAGCA+TGG | - | chr1_4:6077389-6077408 | None:intergenic | 50.0% | |
| GACGAGGGGATAAAAGAAGG+TGG | + | chr1_4:6077498-6077517 | Msa0146430:CDS | 50.0% | |
| GATGCATGCGAGACTAGCAA+CGG | + | chr1_4:6077753-6077772 | Msa0146430:CDS | 50.0% | |
| TCTGTTACAGGCTGTGAAGG+AGG | - | chr1_4:6077807-6077826 | None:intergenic | 50.0% | |
| !! | GGCACATATGAAAGTGCTGC+TGG | + | chr1_4:6077897-6077916 | Msa0146430:CDS | 50.0% |
| ACCGACGTACCTAGAAGACA+CGG | + | chr1_4:6077929-6077948 | Msa0146430:CDS | 50.0% | |
| ACCGTGTCTTCTAGGTACGT+CGG | - | chr1_4:6077933-6077952 | None:intergenic | 50.0% | |
| ! | TGTCAAGTGTCGCCTGAATC+AGG | - | chr1_4:6078619-6078638 | None:intergenic | 50.0% |
| ATTCAGGCGACACTTGACAG+TGG | + | chr1_4:6078620-6078639 | Msa0146430:CDS | 50.0% | |
| ACAGTGGAGTGACAGACAAG+AGG | + | chr1_4:6078636-6078655 | Msa0146430:CDS | 50.0% | |
| TCATCGACGATTTCCCACCT+AGG | - | chr1_4:6078736-6078755 | None:intergenic | 50.0% | |
| AGGTGGGAAATCGTCGATGA+TGG | + | chr1_4:6078736-6078755 | Msa0146430:CDS | 50.0% | |
| GGTGGGAAATCGTCGATGAT+GGG | + | chr1_4:6078737-6078756 | Msa0146430:CDS | 50.0% | |
| CACAGAAGGTAGAGGTGGAT+AGG | + | chr1_4:6080055-6080074 | Msa0146430:CDS | 50.0% | |
| TCCATTGCAGTCTTCTCAGC+CGG | - | chr1_4:6080294-6080313 | None:intergenic | 50.0% | |
| GTTGGTGCATCCAGAAGCAA+TGG | + | chr1_4:6080453-6080472 | Msa0146430:CDS | 50.0% | |
| GATGTAAAGCTAGGTCCGAG+AGG | + | chr1_4:6080671-6080690 | Msa0146430:CDS | 50.0% | |
| !! | TCCGAGAGGCATCAGAGAAT+AGG | + | chr1_4:6080685-6080704 | Msa0146430:CDS | 50.0% |
| ACTCGTGCAGAAAGAGCAAG+AGG | + | chr1_4:6080840-6080859 | Msa0146430:CDS | 50.0% | |
| ATCGGGATGCACACAAAGAG+TGG | - | chr1_4:6081656-6081675 | None:intergenic | 50.0% | |
| GCCGTCGTAAGCAGATCTTC+CGG | - | chr1_4:6076212-6076231 | None:intergenic | 55.0% | |
| TCTCGAACTTCCGGAGCTCA+AGG | + | chr1_4:6076333-6076352 | Msa0146430:CDS | 55.0% | |
| !! | CTGGATTCTGAGGTGATGCC+CGG | - | chr1_4:6079409-6079428 | None:intergenic | 55.0% |
| ACCGGCTGAGAAGACTGCAA+TGG | + | chr1_4:6080290-6080309 | Msa0146430:CDS | 55.0% | |
| TAAAGCTGAACGCGCTGCTG+TGG | + | chr1_4:6080323-6080342 | Msa0146430:CDS | 55.0% | |
| TGTGGAGAGAGCAACTGCAG+AGG | + | chr1_4:6080341-6080360 | Msa0146430:CDS | 55.0% | |
| CCACAGAGTGCATGACCATC+AGG | - | chr1_4:6082147-6082166 | None:intergenic | 55.0% | |
| CCTGATGGTCATGCACTCTG+TGG | + | chr1_4:6082144-6082163 | Msa0146430:three_prime_UTR | 55.0% | |
| TCCAACAGCCACTCCGTCAC+CGG | + | chr1_4:6076190-6076209 | Msa0146430:CDS | 60.0% | |
| !! | CAGATCTTCCGGTGACGGAG+TGG | - | chr1_4:6076201-6076220 | None:intergenic | 60.0% |
| TGCAAGAGAGAGGGCAGCTC+TGG | + | chr1_4:6080182-6080201 | Msa0146430:CDS | 60.0% | |
| !! | AGAGAGGGCAGCTCTGGAGA+GGG | + | chr1_4:6080188-6080207 | Msa0146430:CDS | 60.0% |
| ! | AAGAGCACGTGCCCTGGAGA+GGG | + | chr1_4:6080365-6080384 | Msa0146430:CDS | 60.0% |
| CTCAGACAGTGCCCTCTCCA+GGG | - | chr1_4:6080379-6080398 | None:intergenic | 60.0% | |
| TCTCAGACAGTGCCCTCTCC+AGG | - | chr1_4:6080380-6080399 | None:intergenic | 60.0% | |
| !! | GGAGAGGGCACTGTCTGAGA+AGG | + | chr1_4:6080380-6080399 | Msa0146430:CDS | 60.0% |
| GAGCTTCAGCTACCCTCTGC+AGG | - | chr1_4:6080936-6080955 | None:intergenic | 60.0% | |
| AGGTGGTCAAGTGGGAAGGC+AGG | + | chr1_4:6080973-6080992 | Msa0146430:CDS | 60.0% | |
| CAGATCCTTGGGCCCGATAG+TGG | + | chr1_4:6081565-6081584 | Msa0146430:intron | 60.0% | |
| ! | TCCTTGGGCCCGATAGTGGT+TGG | + | chr1_4:6081569-6081588 | Msa0146430:CDS | 60.0% |
| CCTCGCTGCTGCAGCTTATC+GGG | - | chr1_4:6081673-6081692 | None:intergenic | 60.0% | |
| CCCTCGCTGCTGCAGCTTAT+CGG | - | chr1_4:6081674-6081693 | None:intergenic | 60.0% | |
| CCGATAAGCTGCAGCAGCGA+GGG | + | chr1_4:6081671-6081690 | Msa0146430:CDS | 60.0% | |
| CGATAAGCTGCAGCAGCGAG+GGG | + | chr1_4:6081672-6081691 | Msa0146430:CDS | 60.0% | |
| !! | TCCGGTGACGGAGTGGCTGT+TGG | - | chr1_4:6076194-6076213 | None:intergenic | 65.0% |
| TAGGGTGTGTGGCTCCCTCG+AGG | - | chr1_4:6079285-6079304 | None:intergenic | 65.0% | |
| CGAGGGAGCCACACACCCTA+TGG | + | chr1_4:6079285-6079304 | Msa0146430:CDS | 65.0% | |
| !! | GAGAGAGGGCAGCTCTGGAG+AGG | + | chr1_4:6080187-6080206 | Msa0146430:CDS | 65.0% |
| ! | AGAGGCAAGAGCACGTGCCC+TGG | + | chr1_4:6080359-6080378 | Msa0146430:CDS | 65.0% |
| ! | CAAGAGCACGTGCCCTGGAG+AGG | + | chr1_4:6080364-6080383 | Msa0146430:CDS | 65.0% |
| GCCAACCACTATCGGGCCCA+AGG | - | chr1_4:6081573-6081592 | None:intergenic | 65.0% | |
| CCCGATAAGCTGCAGCAGCG+AGG | + | chr1_4:6081670-6081689 | Msa0146430:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 6076148 | 6082369 | 6076148 | ID=Msa0146430;Name=Msa0146430 |
| chr1_4 | mRNA | 6076148 | 6082369 | 6076148 | ID=Msa0146430-mRNA-1;Parent=Msa0146430;Name=Msa0146430-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.83|0.71|1|1|1|7|248|1368 |
| chr1_4 | exon | 6076148 | 6076482 | 6076148 | ID=Msa0146430-mRNA-1:exon:2605;Parent=Msa0146430-mRNA-1 |
| chr1_4 | exon | 6077212 | 6080516 | 6077212 | ID=Msa0146430-mRNA-1:exon:2606;Parent=Msa0146430-mRNA-1 |
| chr1_4 | exon | 6080620 | 6080717 | 6080620 | ID=Msa0146430-mRNA-1:exon:2607;Parent=Msa0146430-mRNA-1 |
| chr1_4 | exon | 6080805 | 6080870 | 6080805 | ID=Msa0146430-mRNA-1:exon:2608;Parent=Msa0146430-mRNA-1 |
| chr1_4 | exon | 6080940 | 6081029 | 6080940 | ID=Msa0146430-mRNA-1:exon:2609;Parent=Msa0146430-mRNA-1 |
| chr1_4 | exon | 6081568 | 6081744 | 6081568 | ID=Msa0146430-mRNA-1:exon:2610;Parent=Msa0146430-mRNA-1 |
| chr1_4 | exon | 6082086 | 6082369 | 6082086 | ID=Msa0146430-mRNA-1:exon:2611;Parent=Msa0146430-mRNA-1 |
| chr1_4 | CDS | 6076148 | 6076482 | 6076148 | ID=Msa0146430-mRNA-1:cds;Parent=Msa0146430-mRNA-1 |
| chr1_4 | CDS | 6077212 | 6080516 | 6077212 | ID=Msa0146430-mRNA-1:cds;Parent=Msa0146430-mRNA-1 |
| chr1_4 | CDS | 6080620 | 6080717 | 6080620 | ID=Msa0146430-mRNA-1:cds;Parent=Msa0146430-mRNA-1 |
| chr1_4 | CDS | 6080805 | 6080870 | 6080805 | ID=Msa0146430-mRNA-1:cds;Parent=Msa0146430-mRNA-1 |
| chr1_4 | CDS | 6080940 | 6081029 | 6080940 | ID=Msa0146430-mRNA-1:cds;Parent=Msa0146430-mRNA-1 |
| chr1_4 | CDS | 6081568 | 6081744 | 6081568 | ID=Msa0146430-mRNA-1:cds;Parent=Msa0146430-mRNA-1 |
| chr1_4 | CDS | 6082086 | 6082121 | 6082086 | ID=Msa0146430-mRNA-1:cds;Parent=Msa0146430-mRNA-1 |
| chr1_4 | three_prime_UTR | 6082122 | 6082369 | 6082122 | ID=Msa0146430-mRNA-1:three_prime_utr;Parent=Msa0146430-mRNA-1 |
| Gene Sequence |
| Protein sequence |