AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1382680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1382680 MtrunA17_Chr1g0155381 93.093 1361 53 5 1 1324 1 1357 0.0 2486
Msa1382680 MtrunA17_Chr8g0372931 48.267 375 157 9 983 1324 1058 1428 2.34e-80 291
Msa1382680 MtrunA17_Chr8g0372931 27.295 414 238 17 24 430 28 385 6.37e-18 90.5
Msa1382680 MtrunA17_Chr8g0384651 63.699 146 53 0 1179 1324 756 901 3.03e-53 202
Msa1382680 MtrunA17_Chr3g0130631 63.014 146 54 0 1179 1324 578 723 7.79e-53 199
Msa1382680 MtrunA17_Chr3g0125121 50.282 177 77 3 1158 1324 334 509 1.02e-46 176
Msa1382680 MtrunA17_Chr3g0141421 54.651 86 39 0 1239 1324 596 681 5.41e-27 118
Msa1382680 MtrunA17_Chr2g0304091 54.651 86 39 0 1239 1324 357 442 6.64e-25 110
Msa1382680 MtrunA17_Chr8g0376701 52.326 86 41 0 1239 1324 364 449 4.52e-24 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1382680 AT1G75310.2 58.278 302 114 6 1029 1324 1145 1440 3.97e-84 303
Msa1382680 AT1G75310.2 30.310 452 235 20 1 438 1 386 3.05e-29 127
Msa1382680 AT1G75310.1 57.426 303 112 7 1029 1324 1145 1437 4.66e-83 300
Msa1382680 AT1G75310.1 30.310 452 235 20 1 438 1 386 2.53e-29 128
Msa1382680 AT4G36520.1 48.127 347 146 10 999 1324 1078 1411 1.20e-72 267
Msa1382680 AT4G36520.1 31.481 216 104 9 7 181 13 225 2.24e-17 89.0
Msa1382680 AT4G12780.3 60.000 140 56 0 1185 1324 726 865 3.81e-45 177
Msa1382680 AT4G12780.1 60.000 140 56 0 1185 1324 753 892 5.14e-45 177
Msa1382680 AT4G12770.2 58.219 146 60 1 1179 1324 733 877 5.55e-45 177
Msa1382680 AT4G12770.1 59.286 140 57 0 1185 1324 740 879 6.41e-45 177
Msa1382680 AT4G12780.2 54.777 157 54 2 1185 1324 726 882 6.32e-42 167
Msa1382680 AT1G21660.1 51.515 132 64 0 1193 1324 380 511 1.83e-39 155
Msa1382680 AT1G75100.1 56.180 89 39 0 1241 1329 556 644 2.10e-27 120
Msa1382680 AT1G30280.2 48.193 83 42 1 1245 1326 361 443 8.72e-17 85.5
Msa1382680 AT1G30280.1 48.148 81 41 1 1245 1324 361 441 3.96e-16 83.2

Find 261 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCTTCTGTAGCTGCTTTA+AGG 0.107747 tig0020520:+134905 Msa1382680:CDS
CCCTCGCTGCTGCAGCTTAT+CGG 0.205621 tig0020520:-138612 None:intergenic
ACAGCCTGTAACAGATAATT+TGG 0.210029 tig0020520:+134744 Msa1382680:CDS
TTGAAATGGTTAAGGAATAT+TGG 0.215083 tig0020520:+135415 Msa1382680:CDS
TTATCCAAATTATCTGTTAC+AGG 0.228191 tig0020520:-134748 None:intergenic
TTGAGTCAACCGTGTCTTCT+AGG 0.241410 tig0020520:-134870 None:intergenic
TTAGTAACTTGAACAGATTC+TGG 0.251253 tig0020520:-136535 None:intergenic
TCATTAAACAACATGAAAAT+TGG 0.253397 tig0020520:+138704 Msa1382680:CDS
TTGCTTTGTTCCATTGCTTC+TGG 0.266976 tig0020520:-137395 None:intergenic
GTTAACCAAGGAAGTGAAAA+TGG 0.270117 tig0020520:+134265 Msa1382680:CDS
GACTGTTTCTTGACATTATT+AGG 0.275632 tig0020520:-134607 None:intergenic
GATTCTACTGGGGTCTTTGA+TGG 0.278154 tig0020520:+137567 Msa1382680:CDS
GCAAAGGCTAGTGATTTAAA+TGG 0.292351 tig0020520:+136151 Msa1382680:CDS
CTCTCGATGCCGATGTTAAA+AGG 0.297624 tig0020520:+137895 Msa1382680:CDS
ATATGACATATTGATCGTTT+TGG 0.308968 tig0020520:-134236 None:intergenic
ACTATTGCTGTTAAAGGAAT+TGG 0.313533 tig0020520:-138536 None:intergenic
TGAAATGGTTAAGGAATATT+GGG 0.315628 tig0020520:+135416 Msa1382680:CDS
TCTCTTCATCGTGGTGAATA+TGG 0.316778 tig0020520:-136114 None:intergenic
CTTGGAGTTCTTAGCTTGAT+TGG 0.316936 tig0020520:-133170 None:intergenic
ACCTCTTCCTTATGTTTGTC+TGG 0.323897 tig0020520:-135261 None:intergenic
TCTGAAGTTCGTGATTCTAC+TGG 0.332930 tig0020520:+137555 Msa1382680:intron
CTTACTTTCTCTGTTCTCAT+TGG 0.337977 tig0020520:-135162 None:intergenic
TTCAACTTCTCAGTTTCATC+TGG 0.344128 tig0020520:-136373 None:intergenic
CTAGTATCAATTTGAAAGTC+AGG 0.344292 tig0020520:+135022 Msa1382680:CDS
GTGGTTACTATTGCTGTTAA+AGG 0.345660 tig0020520:-138542 None:intergenic
ATCAATTCCCAGCAAAATAA+AGG 0.348948 tig0020520:+136913 Msa1382680:CDS
ATTGTATGATCAGATTCTTC+AGG 0.350719 tig0020520:-135393 None:intergenic
GAAGGAATGCATCTGGTTCT+TGG 0.351045 tig0020520:+135993 Msa1382680:CDS
CCTCGCTGCTGCAGCTTATC+GGG 0.364311 tig0020520:-138611 None:intergenic
GGAAGTGAAAATGGAACAAA+TGG 0.368141 tig0020520:+134274 Msa1382680:CDS
TCTCAGACAGTGCCCTCTCC+AGG 0.368364 tig0020520:-137309 None:intergenic
ATCTGGTTCATAGCTAGAAC+TGG 0.372127 tig0020520:-136356 None:intergenic
TTTGATCTTCTAAAGGTTTG+TGG 0.373601 tig0020520:+138671 Msa1382680:CDS
TTTCACCTCCTCTTCTTTGA+AGG 0.377050 tig0020520:-136891 None:intergenic
TGCAAGAGAGAGGGCAGCTC+TGG 0.378359 tig0020520:+137114 Msa1382680:CDS
TGTCAAGTGTCGCCTGAATC+AGG 0.382236 tig0020520:-135548 None:intergenic
CGTTTCGATGCTTTAGGCTT+CGG 0.382721 tig0020520:-133386 None:intergenic
CGGTAAGCTTTCTTTACATC+AGG 0.383896 tig0020520:-138566 None:intergenic
AAGGCAAACATTTGGAGAAA+TGG 0.384101 tig0020520:+135101 Msa1382680:CDS
GAGAAAGTAAGATCAGATAT+CGG 0.385527 tig0020520:+135174 Msa1382680:CDS
CTTGAATTTCGCAGATCCTT+GGG 0.387936 tig0020520:+138495 Msa1382680:intron
GACTTCTGTTTGACATGATC+AGG 0.389147 tig0020520:-135000 None:intergenic
TGGTGAAACAAACCTGATTC+AGG 0.391490 tig0020520:+135536 Msa1382680:CDS
CTGCAAGTTTCTTCTGATGT+AGG 0.393651 tig0020520:+135132 Msa1382680:CDS
GTCAGTTTCACCAACATTTG+TGG 0.394233 tig0020520:-136677 None:intergenic
CTGAAGTTCGTGATTCTACT+GGG 0.396066 tig0020520:+137556 Msa1382680:intron
ACTTTGAGATGCTTGGCATT+TGG 0.397058 tig0020520:-134806 None:intergenic
GCACACAAAGAGTGGCTTTA+CGG 0.399428 tig0020520:-138586 None:intergenic
ACTCACCGTTTCGATGCTTT+AGG 0.400557 tig0020520:-133392 None:intergenic
AGGTTAATTACAGAGCCTTT+TGG 0.402036 tig0020520:-135645 None:intergenic
ATTAATACAAGGCAAACATT+TGG 0.403690 tig0020520:+135093 Msa1382680:CDS
GGAGACAATTTCAATTTGTT+CGG 0.404035 tig0020520:-135240 None:intergenic
TTCTAGGTACGTCGGTGAAT+CGG 0.404391 tig0020520:-134854 None:intergenic
TATAGCTTTCCCTCCATTGT+TGG 0.405404 tig0020520:-134509 None:intergenic
ATCAATAGCATAACTCGTTA+AGG 0.407600 tig0020520:-138790 None:intergenic
CTTTGTTAGTGTTGAGGTGG+TGG 0.408432 tig0020520:-133087 None:intergenic
TTGAGAGCTATTCAGGAACT+TGG 0.413355 tig0020520:+135773 Msa1382680:CDS
CAGATCCTTGGGCCCGATAG+TGG 0.417009 tig0020520:+138506 Msa1382680:intron
AGAGGCTCAAATGAAAATAA+AGG 0.417325 tig0020520:+134939 Msa1382680:CDS
ATCTGATCATACAATTGAAA+TGG 0.417927 tig0020520:+135401 Msa1382680:CDS
ACTTGAATTTCGCAGATCCT+TGG 0.423963 tig0020520:+138494 Msa1382680:intron
GGAGATAAGAGAAGAAGAAC+CGG 0.431525 tig0020520:+136318 Msa1382680:CDS
ATTCTCCTTTCCTTGAGCTC+TGG 0.432096 tig0020520:-133269 None:intergenic
AAGAGGTAGAACATTCCTAT+TGG 0.433303 tig0020520:+136026 Msa1382680:CDS
TCATACAATTGAAATGGTTA+AGG 0.433305 tig0020520:+135407 Msa1382680:CDS
TTCCTTCACTTCCTTTGTCA+CGG 0.434366 tig0020520:-136951 None:intergenic
TAAAGACGAGCAGAGCTAAA+TGG 0.438524 tig0020520:+134365 Msa1382680:CDS
TACCTTCTGTGACTTACCAT+TGG 0.438804 tig0020520:-136975 None:intergenic
AAGGAATGCATCTGGTTCTT+GGG 0.441677 tig0020520:+135994 Msa1382680:CDS
CTGGATTCTGAGGTGTTGCC+CGG 0.443227 tig0020520:-136337 None:intergenic
TCCATTGCAGTCTTCTCAGC+CGG 0.447833 tig0020520:-137223 None:intergenic
ATTTGTGGAATCATTGTCAA+TGG 0.449575 tig0020520:-136662 None:intergenic
AAAGAATAGAGAAAGAGAAA+AGG 0.450397 tig0020520:+137036 Msa1382680:CDS
GATGCACCAACATACTTCTC+TGG 0.450847 tig0020520:-137373 None:intergenic
TCAATTAAACAAGTGTAAGC+AGG 0.451248 tig0020520:-134328 None:intergenic
TCCTATTCTCTGATGCCTCT+CGG 0.453315 tig0020520:-137628 None:intergenic
AGAAAGTAAGATCAGATATC+GGG 0.453718 tig0020520:+135175 Msa1382680:CDS
TTTGTTCGGTGCTTCTTGTA+CGG 0.456160 tig0020520:-135226 None:intergenic
TTCACCTCCTCTTCTTTGAA+GGG 0.458847 tig0020520:-136890 None:intergenic
AATTGGTTGCCAACCACTAT+CGG 0.462991 tig0020520:-138519 None:intergenic
TTTGGAGAAAGAACGGTCAA+TGG 0.467223 tig0020520:-138743 None:intergenic
AGGTGGGAAATCGTCGATGA+TGG 0.467613 tig0020520:+135668 Msa1382680:CDS
GTGATATCACCTTCATTCAA+TGG 0.473045 tig0020520:+134211 Msa1382680:CDS
AGCTCTGGAAGTTCGAGAAT+CGG 0.475743 tig0020520:-133254 None:intergenic
CAGACTTCTGACTTTGATGA+AGG 0.476599 tig0020520:+136583 Msa1382680:CDS
AGTTGAAGAAGTTGAGAACA+AGG 0.478684 tig0020520:+135605 Msa1382680:CDS
CCCTCATTGTCTAATAGCTC+CGG 0.479146 tig0020520:-135890 None:intergenic
CAAAAGTGTCAAGAAGTTGC+TGG 0.481130 tig0020520:+135516 Msa1382680:CDS
CCGATAAGCTGCAGCAGCGA+GGG 0.484078 tig0020520:+138612 Msa1382680:CDS
CACAGAAGGTAGAGGTGGAT+AGG 0.484797 tig0020520:+136987 Msa1382680:CDS
TCAAACTGATCTAATTTATG+AGG 0.490972 tig0020520:+136297 Msa1382680:CDS
TTGGAGAAAGAACGGTCAAT+GGG 0.494214 tig0020520:-138742 None:intergenic
TTCGGAATCAGTTCCTCAAA+AGG 0.494615 tig0020520:-133368 None:intergenic
CGAGGGAGCCACACACCCTA+TGG 0.495109 tig0020520:+136216 Msa1382680:CDS
TGAGTCTATAGAAATATGTA+TGG 0.500843 tig0020520:+136787 Msa1382680:CDS
TCTCGCCGTCGCCGTCGTCA+TGG 0.501464 tig0020520:+133055 Msa1382680:exon
GCTATTCAGGAACTTGGAAA+TGG 0.501968 tig0020520:+135779 Msa1382680:CDS
CTTCATCAAAGTCAGAAGTC+TGG 0.502637 tig0020520:-136582 None:intergenic
TGATCTGCAGGATGATATAA+TGG 0.503126 tig0020520:+136468 Msa1382680:CDS
CATTCAAAATCTTTCAGCTA+TGG 0.503489 tig0020520:+137424 Msa1382680:CDS
TACACTGTTTCACTGAGTAC+AGG 0.506736 tig0020520:-136610 None:intergenic
GAATATTGGGAGCAGGAGAA+TGG 0.507785 tig0020520:+135429 Msa1382680:CDS
ACAGAAGGTAGAGGTGGATA+GGG 0.508513 tig0020520:+136988 Msa1382680:CDS
AGGTGGTCAAGTGGGAAGGC+AGG 0.509799 tig0020520:+137915 Msa1382680:CDS
GCAGGAGAATGGTGAAGAAA+AGG 0.512746 tig0020520:+135440 Msa1382680:CDS
ATCAGTGGCTTCTCTCCAAT+AGG 0.513023 tig0020520:-136041 None:intergenic
CTCAGACAGTGCCCTCTCCA+GGG 0.513165 tig0020520:-137308 None:intergenic
TCCGAGAGGCATCAGAGAAT+AGG 0.514883 tig0020520:+137627 Msa1382680:CDS
CTGAGATGCTTCACAAGAAG+AGG 0.516080 tig0020520:-136864 None:intergenic
AGAGGCAAGAGCACGTGCCC+TGG 0.516970 tig0020520:+137291 Msa1382680:CDS
GCCGTCGTAAGCAGATCTTC+CGG 0.518660 tig0020520:-133135 None:intergenic
AGAAATATGTATGGATGCAA+AGG 0.520243 tig0020520:+136796 Msa1382680:CDS
ATGTGAATTGACAGAGTCTC+CGG 0.521094 tig0020520:+135871 Msa1382680:CDS
ATTGGTTGCCAACCACTATC+GGG 0.521170 tig0020520:-138518 None:intergenic
AAGTGAGAATAAAGTTGAAG+TGG 0.522061 tig0020520:+135832 Msa1382680:CDS
GGCTCTGTAATTAACCTAGG+TGG 0.523520 tig0020520:+135651 Msa1382680:CDS
GGTTAAGGAATATTGGGAGC+AGG 0.526989 tig0020520:+135422 Msa1382680:CDS
TCCGGTGACGGAGTAGCTGT+TGG 0.527818 tig0020520:-133117 None:intergenic
TCAATGAGAAGAAAGAAAGA+AGG 0.527897 tig0020520:+134973 Msa1382680:CDS
ACACCGTTTAATGAACCAAA+AGG 0.529177 tig0020520:+135630 Msa1382680:CDS
TTTCTCATTTGCTTGACAAG+TGG 0.531448 tig0020520:-137197 None:intergenic
ATTGTCTCCAGACAAACATA+AGG 0.533755 tig0020520:+135254 Msa1382680:CDS
AAGAGCACGTGCCCTGGAGA+GGG 0.533837 tig0020520:+137297 Msa1382680:CDS
TGACATTATTAGGTGAAGCA+TGG 0.537366 tig0020520:-134597 None:intergenic
TCCAACAGCTACTCCGTCAC+CGG 0.538771 tig0020520:+133116 Msa1382680:CDS
GCTCTGTAATTAACCTAGGT+GGG 0.540673 tig0020520:+135652 Msa1382680:CDS
TGGAAGAAAATGCGAGTGAA+AGG 0.540789 tig0020520:+136236 Msa1382680:CDS
GTGCTTCTTTGTTAGTGTTG+AGG 0.541232 tig0020520:-133093 None:intergenic
TATAGGAGCAAAGTCAAAAG+TGG 0.544215 tig0020520:+134139 Msa1382680:intron
GACAATGATTCCACAAATGT+TGG 0.545389 tig0020520:+136667 Msa1382680:CDS
TTATCTGTTACAGGCTGTGA+AGG 0.546462 tig0020520:-134739 None:intergenic
TTGAATGAAGGTGATATCAC+CGG 0.549105 tig0020520:-134208 None:intergenic
CAATTCGTGAAGCTCGTGAA+AGG 0.549174 tig0020520:+137080 Msa1382680:CDS
AGATCGTGTTAATTCTTCAA+AGG 0.551548 tig0020520:+134180 Msa1382680:CDS
CCCGATAAGCTGCAGCAGCG+AGG 0.552225 tig0020520:+138611 Msa1382680:CDS
AGCAATGGAACAAAGCAAAA+CGG 0.552231 tig0020520:+137400 Msa1382680:CDS
CTGCTCAGAGATGTAAAGCT+AGG 0.553857 tig0020520:+137604 Msa1382680:CDS
ATGTGCCACTTTGAGATGCT+TGG 0.554499 tig0020520:-134813 None:intergenic
GGAGAGGGCACTGTCTGAGA+AGG 0.555104 tig0020520:+137312 Msa1382680:CDS
TTCTGTAGCTGCTTTAAGGA+AGG 0.556360 tig0020520:+134909 Msa1382680:CDS
ATTGGCTATAAGCCAGAAGA+TGG 0.556595 tig0020520:+135705 Msa1382680:CDS
AACAGTCTTTCAACAATGGA+GGG 0.557749 tig0020520:+134623 Msa1382680:CDS
ATGGTCTATACCAGCAGCAA+AGG 0.559400 tig0020520:+134384 Msa1382680:CDS
TATCAATGTCAAGGAAACAC+TGG 0.561651 tig0020520:+136078 Msa1382680:CDS
ACACTGTTTCACTGAGTACA+GGG 0.561909 tig0020520:-136609 None:intergenic
GCAGTTAATGAAGCAAGTTA+TGG 0.562495 tig0020520:+135468 Msa1382680:CDS
AGCTTTCTTTACATCAGGTG+TGG 0.562529 tig0020520:-138561 None:intergenic
CAGGATGATATAATGGTCAC+AGG 0.563576 tig0020520:+136475 Msa1382680:CDS
TAAAGCTGAACGCGCTGCTG+TGG 0.563761 tig0020520:+137255 Msa1382680:CDS
GGTGGGAAATCGTCGATGAT+GGG 0.564317 tig0020520:+135669 Msa1382680:CDS
TCCAGACAAACATAAGGAAG+AGG 0.565417 tig0020520:+135260 Msa1382680:CDS
GATTTCTGCGAGAAACATGC+AGG 0.566233 tig0020520:+136559 Msa1382680:CDS
TCAAAATCTTTCAGCTATGG+TGG 0.566831 tig0020520:+137427 Msa1382680:CDS
TCTCGAACTTCCAGAGCTCA+AGG 0.566908 tig0020520:+133259 Msa1382680:CDS
AATTCGTGAAGCTCGTGAAA+GGG 0.566984 tig0020520:+137081 Msa1382680:CDS
AAACAGTCTTTCAACAATGG+AGG 0.567430 tig0020520:+134622 Msa1382680:CDS
ATCCGTGACAAAGGAAGTGA+AGG 0.567826 tig0020520:+136949 Msa1382680:CDS
GCCAACCACTATCGGGCCCA+AGG 0.567934 tig0020520:-138511 None:intergenic
ATGTTAAAAGGTGGTCAAGT+GGG 0.568578 tig0020520:+137907 Msa1382680:CDS
CTTCTTTGTTAGTGTTGAGG+TGG 0.569116 tig0020520:-133090 None:intergenic
GCAAAAGTACACTTGTGAGA+AGG 0.569795 tig0020520:+138646 Msa1382680:CDS
TCCTTGGGCCCGATAGTGGT+TGG 0.570322 tig0020520:+138510 Msa1382680:CDS
TCCGGAGCTATTAGACAATG+AGG 0.570468 tig0020520:+135889 Msa1382680:CDS
TCATTCAGAATTAATAAGCA+TGG 0.570815 tig0020520:+135928 Msa1382680:CDS
CAAGAGCACGTGCCCTGGAG+AGG 0.571595 tig0020520:+137296 Msa1382680:CDS
TTCTGGTATTCATTGTGACG+AGG 0.571760 tig0020520:+134414 Msa1382680:CDS
AATATGTATGGATGCAAAGG+AGG 0.571943 tig0020520:+136799 Msa1382680:CDS
CTTATTAATTCTGAATGATG+AGG 0.573496 tig0020520:-135923 None:intergenic
AACTTCCAGAGCTCAAGGAA+AGG 0.573960 tig0020520:+133264 Msa1382680:CDS
AGTGACAGACAAGAGGTTGA+AGG 0.574258 tig0020520:+135575 Msa1382680:CDS
GTTGGTGCATCCAGAAGCAA+TGG 0.578128 tig0020520:+137385 Msa1382680:CDS
AAGTGTAAGCAGGGACAGCA+TGG 0.578502 tig0020520:-134318 None:intergenic
AGAGCTCAAGGAAAGGAGAA+TGG 0.579068 tig0020520:+133271 Msa1382680:CDS
AAGAAACAGTCTTTCAACAA+TGG 0.581600 tig0020520:+134619 Msa1382680:CDS
GTAAGCAGATCTTCCGGTGA+CGG 0.582348 tig0020520:-133129 None:intergenic
GAAGTGAAAATGGAACAAAT+GGG 0.583313 tig0020520:+134275 Msa1382680:CDS
CGATAAGCTGCAGCAGCGAG+GGG 0.583635 tig0020520:+138613 Msa1382680:CDS
TAATTCTTCAAAGGAAATCC+CGG 0.584483 tig0020520:+134189 Msa1382680:CDS
ACTCGTGCAGAAAGAGCAAG+AGG 0.584590 tig0020520:+137782 Msa1382680:CDS
TAGTATCAATTTGAAAGTCA+GGG 0.586049 tig0020520:+135023 Msa1382680:CDS
GAGAGAGGGCAGCTCTGGAG+AGG 0.586072 tig0020520:+137119 Msa1382680:CDS
AAAGGCTCTGTAATTAACCT+AGG 0.588058 tig0020520:+135648 Msa1382680:CDS
CTGAAAGAAGCAGATCATGA+AGG 0.589550 tig0020520:+135288 Msa1382680:CDS
TCAGATACCCTTCAAAGAAG+AGG 0.590042 tig0020520:+136883 Msa1382680:CDS
TCTGGTATTCATTGTGACGA+GGG 0.590444 tig0020520:+134415 Msa1382680:CDS
ATCGGGATGCACACAAAGAG+TGG 0.590973 tig0020520:-138594 None:intergenic
TGTGACGAGGGGATAAAAGA+AGG 0.591437 tig0020520:+134427 Msa1382680:CDS
CCGGAGCTATTAGACAATGA+GGG 0.593751 tig0020520:+135890 Msa1382680:CDS
TCATCAAACATCCGTGACAA+AGG 0.593967 tig0020520:+136940 Msa1382680:CDS
ATACATATTTCTATAGACTC+AGG 0.594208 tig0020520:-136785 None:intergenic
GGCACATATGAAAGTGCTGC+TGG 0.595442 tig0020520:+134829 Msa1382680:CDS
AACAGTCTACCAACAATGGA+GGG 0.596418 tig0020520:+134500 Msa1382680:CDS
TCGTCGAATTGAGAGAAGCT+TGG 0.598506 tig0020520:-133188 None:intergenic
AGAGAGGGCAGCTCTGGAGA+GGG 0.599872 tig0020520:+137120 Msa1382680:CDS
ATAGCTAGAACTGGATTCTG+AGG 0.600865 tig0020520:-136347 None:intergenic
TGGTAAGTCACAGAAGGTAG+AGG 0.601388 tig0020520:+136979 Msa1382680:CDS
ATAAAACATATCAACAGAGT+CGG 0.601558 tig0020520:-134662 None:intergenic
AAGAAACAGTCTACCAACAA+TGG 0.604493 tig0020520:+134496 Msa1382680:CDS
CATTGATACTTCGAGATCAA+CGG 0.604620 tig0020520:+134780 Msa1382680:CDS
AGCCAATGGTAAGTCACAGA+AGG 0.605760 tig0020520:+136973 Msa1382680:CDS
CAATTAAACAAGTGTAAGCA+GGG 0.607398 tig0020520:-134327 None:intergenic
GAACTCCATGACGACGGCGA+CGG 0.607549 tig0020520:-133060 None:intergenic
GTTTAGCAATATCAATGTCA+AGG 0.609500 tig0020520:+136069 Msa1382680:CDS
CGAAGCCTAAAGCATCGAAA+CGG 0.609970 tig0020520:+133387 Msa1382680:CDS
GTGATTTAAATGGAAATGTG+AGG 0.611031 tig0020520:+136161 Msa1382680:CDS
CTGGTATTCATTGTGACGAG+GGG 0.611620 tig0020520:+134416 Msa1382680:CDS
TCTGTTACAGGCTGTGAAGG+AGG 0.611639 tig0020520:-134736 None:intergenic
CATTTGCTGATGCAAGAGAG+AGG 0.611807 tig0020520:+137104 Msa1382680:CDS
TCTGGTCCAGAGAAGTATGT+TGG 0.615382 tig0020520:+137367 Msa1382680:CDS
TGAAGACTTTCGAATAATCG+AGG 0.618481 tig0020520:-133316 None:intergenic
TAAAAGGTGGTCAAGTGGGA+AGG 0.619386 tig0020520:+137911 Msa1382680:CDS
GAGATAAGAGAAGAAGAACC+GGG 0.624058 tig0020520:+136319 Msa1382680:CDS
AAACAGTCTACCAACAATGG+AGG 0.626548 tig0020520:+134499 Msa1382680:CDS
TCTGAATGATGAGGACTGCA+CGG 0.627361 tig0020520:-135914 None:intergenic
ATTGCTAAACGTACTATCAG+TGG 0.628136 tig0020520:-136056 None:intergenic
GATTTATGAAAGAAATGCAA+AGG 0.628939 tig0020520:+136135 Msa1382680:CDS
TGTTGGTGAAACTGACATGA+AGG 0.630531 tig0020520:+136684 Msa1382680:CDS
TGAAGTTCGTGATTCTACTG+GGG 0.631933 tig0020520:+137557 Msa1382680:intron
ATCAGAAGAAACTTGCAGCA+AGG 0.633986 tig0020520:-135127 None:intergenic
AGATCACATGAATAAAACTC+TGG 0.634048 tig0020520:-136451 None:intergenic
AAATGCCAAGCATCTCAAAG+TGG 0.637894 tig0020520:+134808 Msa1382680:CDS
TAAGTCACAGAAGGTAGAGG+TGG 0.639341 tig0020520:+136982 Msa1382680:CDS
TTCTTGGGATGTAAATCAAG+AGG 0.643015 tig0020520:+136009 Msa1382680:CDS
TTTCATAAATCTCTTCATCG+TGG 0.643783 tig0020520:-136123 None:intergenic
ACCGGCTGAGAAGACTGCAA+TGG 0.644940 tig0020520:+137222 Msa1382680:CDS
GATGTTAAAAGGTGGTCAAG+TGG 0.645928 tig0020520:+137906 Msa1382680:CDS
ACAGTGGAGTGACAGACAAG+AGG 0.647164 tig0020520:+135568 Msa1382680:CDS
TTTAAGGAAGGCAATAGAAG+AGG 0.648026 tig0020520:+134921 Msa1382680:CDS
TGAATGAAGGTGATATCACC+GGG 0.649170 tig0020520:-134207 None:intergenic
ATTTGCTGATGCAAGAGAGA+GGG 0.650221 tig0020520:+137105 Msa1382680:CDS
TGTGTCAGATGAAGAGATCG+AGG 0.651842 tig0020520:+136829 Msa1382680:CDS
TGAGAAGTTGAACAAAACAC+AGG 0.652092 tig0020520:+136384 Msa1382680:CDS
CACGGTTGACTCAAATTCAG+CGG 0.655198 tig0020520:+134879 Msa1382680:CDS
GATACCCTTCAAAGAAGAGG+AGG 0.656350 tig0020520:+136886 Msa1382680:CDS
CGGAGCTATTAGACAATGAG+GGG 0.656874 tig0020520:+135891 Msa1382680:CDS
TAGGGTGTGTGGCTCCCTCG+AGG 0.657421 tig0020520:-136213 None:intergenic
TGCTTGTGAAAATGACCTCG+AGG 0.659552 tig0020520:+136198 Msa1382680:CDS
TCAAGCAAATGAGAAAACAC+CGG 0.660997 tig0020520:+137204 Msa1382680:CDS
TCATCGACGATTTCCCACCT+AGG 0.661183 tig0020520:-135665 None:intergenic
AAGGAAGTGAAGGAAGCCAA+TGG 0.661589 tig0020520:+136959 Msa1382680:CDS
TGTGGAGAGAGCAACTGCAG+AGG 0.665838 tig0020520:+137273 Msa1382680:CDS
GATTATTCGAAAGTCTTCAG+CGG 0.668218 tig0020520:+133320 Msa1382680:CDS
GCTTGTGAAAATGACCTCGA+GGG 0.669828 tig0020520:+136199 Msa1382680:CDS
GAGTGAAAGGAAAGACAACA+AGG 0.671135 tig0020520:+136249 Msa1382680:CDS
TCAGAGAATAGGAGAACGTG+TGG 0.673831 tig0020520:+137638 Msa1382680:CDS
TCATATCATAAAGTTAACCA+AGG 0.677448 tig0020520:+134253 Msa1382680:CDS
ATTCAGGCGACACTTGACAG+TGG 0.679117 tig0020520:+135552 Msa1382680:CDS
GAAAGTAAGATCAGATATCG+GGG 0.680548 tig0020520:+135176 Msa1382680:CDS
GATGTAAAGCTAGGTCCGAG+AGG 0.681919 tig0020520:+137613 Msa1382680:CDS
GATGCATGCGAGACTAGCAA+CGG 0.682120 tig0020520:+134685 Msa1382680:CDS
GACGAGGGGATAAAAGAAGG+TGG 0.682852 tig0020520:+134430 Msa1382680:CDS
ACCGTGTCTTCTAGGTACGT+CGG 0.684457 tig0020520:-134862 None:intergenic
AAGTTAACGAGATTAATACA+AGG 0.686891 tig0020520:+135082 Msa1382680:CDS
CAATGTCAAGGAAACACTGG+AGG 0.687778 tig0020520:+136081 Msa1382680:CDS
CACTGTTTCACTGAGTACAG+GGG 0.697126 tig0020520:-136608 None:intergenic
TCGATGCCGATGTTAAAAGG+TGG 0.697898 tig0020520:+137898 Msa1382680:CDS
ACCGGAAGATCTGCTTACGA+CGG 0.704223 tig0020520:+133134 Msa1382680:CDS
GGCTCTGAACTCCATGACGA+CGG 0.704268 tig0020520:-133066 None:intergenic
ACCGACGTACCTAGAAGACA+CGG 0.718058 tig0020520:+134861 Msa1382680:CDS
TCAATTCGACGATTACAACG+AGG 0.771806 tig0020520:+133199 Msa1382680:CDS
TGAAAGGAAAGACAACAAGG+TGG 0.803777 tig0020520:+136252 Msa1382680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAACAAAAAAAAAAA+AGG - tig0020520:133649-133668 None:intergenic 10.0%
!! AAAAAAAAGAAAAAAAAAGA+AGG - tig0020520:137493-137512 None:intergenic 10.0%
!! AGATAATAATACTACAAAAT+TGG - tig0020520:133771-133790 None:intergenic 15.0%
!!! TAATCGTTCTTTGTATTTTA+GGG + tig0020520:133429-133448 Msa1382680:intron 20.0%
!!! TTTTGTAGTATTATTATCTG+AGG + tig0020520:133772-133791 Msa1382680:intron 20.0%
!! TTTGTAGTATTATTATCTGA+GGG + tig0020520:133773-133792 Msa1382680:intron 20.0%
!!! AAAAAATTTTGAGCTTAAAG+AGG + tig0020520:135311-135330 Msa1382680:CDS 20.0%
!!! TACCAGTGTTTTTAATATAA+GGG - tig0020520:135356-135375 None:intergenic 20.0%
!! AAAAATAAATATGACAAGTC+TGG + tig0020520:137349-137368 Msa1382680:CDS 20.0%
!! TCAAGAAATAACAATCTAAA+AGG - tig0020520:138035-138054 None:intergenic 20.0%
!!! ATTTTCATGTTGTTTAATGA+TGG - tig0020520:138704-138723 None:intergenic 20.0%
!! TCATTAAACAACATGAAAAT+TGG + tig0020520:138704-138723 Msa1382680:CDS 20.0%
!!! TGATAAATGTTTTCCATTTT+TGG - tig0020520:138764-138783 None:intergenic 20.0%
!! GTAATCGTTCTTTGTATTTT+AGG + tig0020520:133428-133447 Msa1382680:intron 25.0%
! TCTTATTAACATGTCATAAG+CGG - tig0020520:133875-133894 None:intergenic 25.0%
!! ATATGACATATTGATCGTTT+TGG - tig0020520:134239-134258 None:intergenic 25.0%
! TCATATCATAAAGTTAACCA+AGG + tig0020520:134253-134272 Msa1382680:CDS 25.0%
!! GATATGTTTTATGATGAAGA+AGG + tig0020520:134550-134569 Msa1382680:CDS 25.0%
! ATAAAACATATCAACAGAGT+CGG - tig0020520:134542-134561 None:intergenic 25.0%
! TTATCCAAATTATCTGTTAC+AGG - tig0020520:134751-134770 None:intergenic 25.0%
! TAGTATCAATTTGAAAGTCA+GGG + tig0020520:135023-135042 Msa1382680:CDS 25.0%
! AAGTTAACGAGATTAATACA+AGG + tig0020520:135082-135101 Msa1382680:CDS 25.0%
! ATTAATACAAGGCAAACATT+TGG + tig0020520:135093-135112 Msa1382680:CDS 25.0%
!!! CTACCAGTGTTTTTAATATA+AGG - tig0020520:135357-135376 None:intergenic 25.0%
! CTTATATTAAAAACACTGGT+AGG + tig0020520:135355-135374 Msa1382680:CDS 25.0%
! ATCTGATCATACAATTGAAA+TGG + tig0020520:135401-135420 Msa1382680:CDS 25.0%
! TCATACAATTGAAATGGTTA+AGG + tig0020520:135407-135426 Msa1382680:CDS 25.0%
! TTGAAATGGTTAAGGAATAT+TGG + tig0020520:135415-135434 Msa1382680:CDS 25.0%
! TGAAATGGTTAAGGAATATT+GGG + tig0020520:135416-135435 Msa1382680:CDS 25.0%
!! ATGGGAAAGAAAAAAAGTAT+TGG + tig0020520:135687-135706 Msa1382680:CDS 25.0%
! AAGATGGTAAAAAGACTAAA+TGG + tig0020520:135721-135740 Msa1382680:intron 25.0%
!! TGAATAGCTCTCAATATTTT+TGG - tig0020520:135767-135786 None:intergenic 25.0%
! AAAAATATTGAGAGCTATTC+AGG + tig0020520:135766-135785 Msa1382680:CDS 25.0%
! CTTATTAATTCTGAATGATG+AGG - tig0020520:135926-135945 None:intergenic 25.0%
! TCATTCAGAATTAATAAGCA+TGG + tig0020520:135928-135947 Msa1382680:CDS 25.0%
! GATTTATGAAAGAAATGCAA+AGG + tig0020520:136135-136154 Msa1382680:CDS 25.0%
! TCAAACTGATCTAATTTATG+AGG + tig0020520:136297-136316 Msa1382680:CDS 25.0%
!! ATACATATTTCTATAGACTC+AGG - tig0020520:136788-136807 None:intergenic 25.0%
! TGAGTCTATAGAAATATGTA+TGG + tig0020520:136787-136806 Msa1382680:CDS 25.0%
! AAAGAATAGAGAAAGAGAAA+AGG + tig0020520:137036-137055 Msa1382680:CDS 25.0%
!! GTCAAAAGAACATTTTGAAT+GGG + tig0020520:137158-137177 Msa1382680:CDS 25.0%
! CCAATATGTACAAAAAACAT+GGG - tig0020520:137681-137700 None:intergenic 25.0%
! ACCAATATGTACAAAAAACA+TGG - tig0020520:137682-137701 None:intergenic 25.0%
! GAATATTGTGTTAGACAAAA+TGG - tig0020520:137852-137871 None:intergenic 25.0%
! ATCAGAGGTTATATTCTAAA+AGG - tig0020520:138002-138021 None:intergenic 25.0%
! AGAAATAACAATCTAAAAGG+AGG - tig0020520:138032-138051 None:intergenic 25.0%
! TTGATATATTGCATATGAAC+TGG + tig0020520:138051-138070 Msa1382680:intron 25.0%
! AACAATAAAGGAAAAATCCA+TGG - tig0020520:138077-138096 None:intergenic 25.0%
! GAAAGCTTCATTAACAATAA+AGG - tig0020520:138089-138108 None:intergenic 25.0%
! AAGGTAGTAGTATAAAGTAA+AGG - tig0020520:138410-138429 None:intergenic 25.0%
! TGCTATTGACAAAACTAAAA+AGG - tig0020520:138434-138453 None:intergenic 25.0%
!!! GGGTTTTGTTCATTTTATTG+TGG + tig0020520:133449-133468 Msa1382680:intron 30.0%
!! TGTTGTCTTTTCTGATTTGT+CGG + tig0020520:133541-133560 Msa1382680:intron 30.0%
TTAAGCAAAAGCTCTTCAAA+AGG + tig0020520:133725-133744 Msa1382680:intron 30.0%
TAAGCAAAAGCTCTTCAAAA+GGG + tig0020520:133726-133745 Msa1382680:intron 30.0%
! TAATTTGCAGCTTATAGCAT+AGG - tig0020520:134040-134059 None:intergenic 30.0%
AGATCGTGTTAATTCTTCAA+AGG + tig0020520:134180-134199 Msa1382680:CDS 30.0%
TAATTCTTCAAAGGAAATCC+CGG + tig0020520:134189-134208 Msa1382680:CDS 30.0%
GAAGTGAAAATGGAACAAAT+GGG + tig0020520:134275-134294 Msa1382680:CDS 30.0%
CAATTAAACAAGTGTAAGCA+GGG - tig0020520:134330-134349 None:intergenic 30.0%
TCAATTAAACAAGTGTAAGC+AGG - tig0020520:134331-134350 None:intergenic 30.0%
! ATGTTTTATGATGAAGAAGG+TGG + tig0020520:134553-134572 Msa1382680:CDS 30.0%
! GACTGTTTCTTGACATTATT+AGG - tig0020520:134487-134506 None:intergenic 30.0%
AAGAAACAGTCTTTCAACAA+TGG + tig0020520:134619-134638 Msa1382680:CDS 30.0%
AGAGGCTCAAATGAAAATAA+AGG + tig0020520:134939-134958 Msa1382680:CDS 30.0%
TCAATGAGAAGAAAGAAAGA+AGG + tig0020520:134973-134992 Msa1382680:CDS 30.0%
CTAGTATCAATTTGAAAGTC+AGG + tig0020520:135022-135041 Msa1382680:CDS 30.0%
TTTGAAAGTCAGGGAAAAAA+AGG + tig0020520:135032-135051 Msa1382680:CDS 30.0%
GAGAAAGTAAGATCAGATAT+CGG + tig0020520:135174-135193 Msa1382680:CDS 30.0%
AGAAAGTAAGATCAGATATC+GGG + tig0020520:135175-135194 Msa1382680:CDS 30.0%
! GGAGACAATTTCAATTTGTT+CGG - tig0020520:135243-135262 None:intergenic 30.0%
GACCCTTATATTAAAAACAC+TGG + tig0020520:135351-135370 Msa1382680:CDS 30.0%
ATTGTATGATCAGATTCTTC+AGG - tig0020520:135396-135415 None:intergenic 30.0%
!! GACACTTTTGTTTAGTTTCA+TGG - tig0020520:135506-135525 None:intergenic 30.0%
!! TTAGTCTTTTTACCATCTTC+TGG - tig0020520:135720-135739 None:intergenic 30.0%
AAGTGAGAATAAAGTTGAAG+TGG + tig0020520:135832-135851 Msa1382680:CDS 30.0%
GTTTAGAAGACAAAAAGAGA+AGG + tig0020520:135975-135994 Msa1382680:CDS 30.0%
GTTTAGCAATATCAATGTCA+AGG + tig0020520:136069-136088 Msa1382680:CDS 30.0%
TTTCATAAATCTCTTCATCG+TGG - tig0020520:136126-136145 None:intergenic 30.0%
GTGATTTAAATGGAAATGTG+AGG + tig0020520:136161-136180 Msa1382680:CDS 30.0%
AGATCACATGAATAAAACTC+TGG - tig0020520:136454-136473 None:intergenic 30.0%
TTAGTAACTTGAACAGATTC+TGG - tig0020520:136538-136557 None:intergenic 30.0%
ATTTGTGGAATCATTGTCAA+TGG - tig0020520:136665-136684 None:intergenic 30.0%
AGAAATATGTATGGATGCAA+AGG + tig0020520:136796-136815 Msa1382680:CDS 30.0%
ATCAATTCCCAGCAAAATAA+AGG + tig0020520:136913-136932 Msa1382680:CDS 30.0%
! CGTCAAAAGAACATTTTGAA+TGG + tig0020520:137157-137176 Msa1382680:CDS 30.0%
! CATAGCTGAAAGATTTTGAA+TGG - tig0020520:137426-137445 None:intergenic 30.0%
CATTCAAAATCTTTCAGCTA+TGG + tig0020520:137424-137443 Msa1382680:CDS 30.0%
!!! CCCATGTTTTTTGTACATAT+TGG + tig0020520:137678-137697 Msa1382680:intron 30.0%
! AGAGGTTATATTCTAAAAGG+AGG - tig0020520:137999-138018 None:intergenic 30.0%
TCATTAAATACGCCAAATAC+TGG + tig0020520:138361-138380 Msa1382680:intron 30.0%
CATTAAATACGCCAAATACT+GGG + tig0020520:138362-138381 Msa1382680:intron 30.0%
! TTTAAAGCAAACCCAGTATT+TGG - tig0020520:138376-138395 None:intergenic 30.0%
TTGACAAAACTAAAAAGGCA+AGG - tig0020520:138429-138448 None:intergenic 30.0%
! GTTTTGTCAATAGCATTTCT+TGG + tig0020520:138439-138458 Msa1382680:intron 30.0%
! TCTTGGTAGATCTATTTTAC+TGG + tig0020520:138456-138475 Msa1382680:intron 30.0%
! CTTGGTAGATCTATTTTACT+GGG + tig0020520:138457-138476 Msa1382680:intron 30.0%
! ACTATTGCTGTTAAAGGAAT+TGG - tig0020520:138539-138558 None:intergenic 30.0%
! GAAGGTTTTTGATCTTCTAA+AGG + tig0020520:138664-138683 Msa1382680:CDS 30.0%
! TTTGATCTTCTAAAGGTTTG+TGG + tig0020520:138671-138690 Msa1382680:CDS 30.0%
!! TTCCATTTTTGGAGAAAGAA+CGG - tig0020520:138753-138772 None:intergenic 30.0%
ATCAATAGCATAACTCGTTA+AGG - tig0020520:138793-138812 None:intergenic 30.0%
! AGTGAAAGAGACTTTTCCAA+CGG - tig0020520:132904-132923 None:intergenic 35.0%
TGAAGACTTTCGAATAATCG+AGG - tig0020520:133319-133338 None:intergenic 35.0%
GATTATTCGAAAGTCTTCAG+CGG + tig0020520:133320-133339 Msa1382680:CDS 35.0%
TCGTTTATTTGCATGTGTGT+TGG + tig0020520:133480-133499 Msa1382680:intron 35.0%
AAAGTGTGCAATTATAGCAG+TGG - tig0020520:133695-133714 None:intergenic 35.0%
AAGCAAAAGCTCTTCAAAAG+GGG + tig0020520:133727-133746 Msa1382680:intron 35.0%
TTATTATCTGAGGGTCAGTT+TGG + tig0020520:133782-133801 Msa1382680:intron 35.0%
! CACTTGTTAAAGAGTTTGAG+AGG + tig0020520:133838-133857 Msa1382680:intron 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG - tig0020520:133925-133944 None:intergenic 35.0%
TCTAAGCATCTCACAAGTTA+TGG - tig0020520:134076-134095 None:intergenic 35.0%
TGAGATGCTTAGAATACAGA+CGG + tig0020520:134083-134102 Msa1382680:intron 35.0%
CCTATAGAATAACACATGTC+AGG - tig0020520:134125-134144 None:intergenic 35.0%
! CCTGACATGTGTTATTCTAT+AGG + tig0020520:134122-134141 Msa1382680:intron 35.0%
TATAGGAGCAAAGTCAAAAG+TGG + tig0020520:134139-134158 Msa1382680:intron 35.0%
TTGAATGAAGGTGATATCAC+CGG - tig0020520:134211-134230 None:intergenic 35.0%
GTGATATCACCTTCATTCAA+TGG + tig0020520:134211-134230 Msa1382680:CDS 35.0%
GTTAACCAAGGAAGTGAAAA+TGG + tig0020520:134265-134284 Msa1382680:CDS 35.0%
! TTGTTCCATTTTCACTTCCT+TGG - tig0020520:134273-134292 None:intergenic 35.0%
GGAAGTGAAAATGGAACAAA+TGG + tig0020520:134274-134293 Msa1382680:CDS 35.0%
AAGAAACAGTCTACCAACAA+TGG + tig0020520:134496-134515 Msa1382680:CDS 35.0%
TGACATTATTAGGTGAAGCA+TGG - tig0020520:134600-134619 None:intergenic 35.0%
AAACAGTCTTTCAACAATGG+AGG + tig0020520:134622-134641 Msa1382680:CDS 35.0%
AACAGTCTTTCAACAATGGA+GGG + tig0020520:134623-134642 Msa1382680:CDS 35.0%
ACAGCCTGTAACAGATAATT+TGG + tig0020520:134744-134763 Msa1382680:CDS 35.0%
CATTGATACTTCGAGATCAA+CGG + tig0020520:134780-134799 Msa1382680:CDS 35.0%
TTTAAGGAAGGCAATAGAAG+AGG + tig0020520:134921-134940 Msa1382680:CDS 35.0%
AAGGCAAACATTTGGAGAAA+TGG + tig0020520:135101-135120 Msa1382680:CDS 35.0%
CTTACTTTCTCTGTTCTCAT+TGG - tig0020520:135165-135184 None:intergenic 35.0%
GAAAGTAAGATCAGATATCG+GGG + tig0020520:135176-135195 Msa1382680:CDS 35.0%
ATTGTCTCCAGACAAACATA+AGG + tig0020520:135254-135273 Msa1382680:CDS 35.0%
! AATTTTGAGCTTAAAGAGGC+AGG + tig0020520:135315-135334 Msa1382680:CDS 35.0%
!! AGATTCTTCAGGTTTTTCAG+TGG - tig0020520:135385-135404 None:intergenic 35.0%
GCAGTTAATGAAGCAAGTTA+TGG + tig0020520:135468-135487 Msa1382680:CDS 35.0%
AGTTGAAGAAGTTGAGAACA+AGG + tig0020520:135605-135624 Msa1382680:CDS 35.0%
ACACCGTTTAATGAACCAAA+AGG + tig0020520:135630-135649 Msa1382680:CDS 35.0%
!!! GAGCCTTTTGGTTCATTAAA+CGG - tig0020520:135636-135655 None:intergenic 35.0%
! AGGTTAATTACAGAGCCTTT+TGG - tig0020520:135648-135667 None:intergenic 35.0%
AAAGGCTCTGTAATTAACCT+AGG + tig0020520:135648-135667 Msa1382680:CDS 35.0%
AAAAAGAGAAGGAATGCATC+TGG + tig0020520:135986-136005 Msa1382680:CDS 35.0%
TTCTTGGGATGTAAATCAAG+AGG + tig0020520:136009-136028 Msa1382680:CDS 35.0%
AAGAGGTAGAACATTCCTAT+TGG + tig0020520:136026-136045 Msa1382680:CDS 35.0%
ATTGCTAAACGTACTATCAG+TGG - tig0020520:136059-136078 None:intergenic 35.0%
TATCAATGTCAAGGAAACAC+TGG + tig0020520:136078-136097 Msa1382680:CDS 35.0%
GCAAAGGCTAGTGATTTAAA+TGG + tig0020520:136151-136170 Msa1382680:CDS 35.0%
TTCAACTTCTCAGTTTCATC+TGG - tig0020520:136376-136395 None:intergenic 35.0%
TGAGAAGTTGAACAAAACAC+AGG + tig0020520:136384-136403 Msa1382680:CDS 35.0%
!! GTTTTATTCATGTGATCTGC+AGG + tig0020520:136456-136475 Msa1382680:CDS 35.0%
TGATCTGCAGGATGATATAA+TGG + tig0020520:136468-136487 Msa1382680:CDS 35.0%
GACAATGATTCCACAAATGT+TGG + tig0020520:136667-136686 Msa1382680:CDS 35.0%
AATATGTATGGATGCAAAGG+AGG + tig0020520:136799-136818 Msa1382680:CDS 35.0%
!!! TGACTCTCCTTTATTTTGCT+GGG - tig0020520:136923-136942 None:intergenic 35.0%
!!! ATGACTCTCCTTTATTTTGC+TGG - tig0020520:136924-136943 None:intergenic 35.0%
TTTCTCATTTGCTTGACAAG+TGG - tig0020520:137200-137219 None:intergenic 35.0%
TCAAGCAAATGAGAAAACAC+CGG + tig0020520:137204-137223 Msa1382680:CDS 35.0%
AGCAATGGAACAAAGCAAAA+CGG + tig0020520:137400-137419 Msa1382680:CDS 35.0%
TCAAAATCTTTCAGCTATGG+TGG + tig0020520:137427-137446 Msa1382680:CDS 35.0%
AGTTCCACTTTACCTGATAT+CGG + tig0020520:137465-137484 Msa1382680:intron 35.0%
!! AAAAAGAAGGTACCGATATC+AGG - tig0020520:137480-137499 None:intergenic 35.0%
CAAAAAACATGGGCAAAACA+AGG - tig0020520:137671-137690 None:intergenic 35.0%
TAACGTAGAACAGTGATTGT+TGG - tig0020520:137722-137741 None:intergenic 35.0%
! ACTTGACCACCTTTTAACAT+CGG - tig0020520:137907-137926 None:intergenic 35.0%
ATGTTAAAAGGTGGTCAAGT+GGG + tig0020520:137907-137926 Msa1382680:CDS 35.0%
! AAAGGAGGTATATTCATCAG+AGG - tig0020520:138017-138036 None:intergenic 35.0%
AAGCTTTCCTTGTAAACTTC+AGG + tig0020520:138101-138120 Msa1382680:intron 35.0%
AGCTTTCCTTGTAAACTTCA+GGG + tig0020520:138102-138121 Msa1382680:intron 35.0%
TATCTGTGGAGTCTATAACT+TGG + tig0020520:138201-138220 Msa1382680:intron 35.0%
AGTCTATAACTTGGCTGATA+TGG + tig0020520:138210-138229 Msa1382680:intron 35.0%
! GTGGTTACTATTGCTGTTAA+AGG - tig0020520:138545-138564 None:intergenic 35.0%
!!! TTTTTTCCCTCTCATTCCGT+TGG + tig0020520:132885-132904 Msa1382680:five_prime_UTR 40.0%
! ACTTTTCCAACGGAATGAGA+GGG - tig0020520:132894-132913 None:intergenic 40.0%
! CTTCTTTGTTAGTGTTGAGG+TGG - tig0020520:133093-133112 None:intergenic 40.0%
GTGCTTCTTTGTTAGTGTTG+AGG - tig0020520:133096-133115 None:intergenic 40.0%
! CTTGGAGTTCTTAGCTTGAT+TGG - tig0020520:133173-133192 None:intergenic 40.0%
TCAATTCGACGATTACAACG+AGG + tig0020520:133199-133218 Msa1382680:CDS 40.0%
! GACGATTACAACGAGGTTTT+CGG + tig0020520:133206-133225 Msa1382680:CDS 40.0%
TTCGGAATCAGTTCCTCAAA+AGG - tig0020520:133371-133390 None:intergenic 40.0%
AGCAAAAGCTCTTCAAAAGG+GGG + tig0020520:133728-133747 Msa1382680:intron 40.0%
AATACAGACGGTGACCTTAA+TGG + tig0020520:134095-134114 Msa1382680:intron 40.0%
ACATGTCAGGAACACCATTA+AGG - tig0020520:134112-134131 None:intergenic 40.0%
TGAATGAAGGTGATATCACC+GGG - tig0020520:134210-134229 None:intergenic 40.0%
!!! GTTTTGGCTCCATTGAATGA+AGG - tig0020520:134223-134242 None:intergenic 40.0%
TAAAGACGAGCAGAGCTAAA+TGG + tig0020520:134365-134384 Msa1382680:CDS 40.0%
TTCTGGTATTCATTGTGACG+AGG + tig0020520:134414-134433 Msa1382680:CDS 40.0%
TCTGGTATTCATTGTGACGA+GGG + tig0020520:134415-134434 Msa1382680:CDS 40.0%
AAACAGTCTACCAACAATGG+AGG + tig0020520:134499-134518 Msa1382680:CDS 40.0%
AACAGTCTACCAACAATGGA+GGG + tig0020520:134500-134519 Msa1382680:CDS 40.0%
TATAGCTTTCCCTCCATTGT+TGG - tig0020520:134512-134531 None:intergenic 40.0%
TTATCTGTTACAGGCTGTGA+AGG - tig0020520:134742-134761 None:intergenic 40.0%
!! ACTTTGAGATGCTTGGCATT+TGG - tig0020520:134809-134828 None:intergenic 40.0%
AAATGCCAAGCATCTCAAAG+TGG + tig0020520:134808-134827 Msa1382680:CDS 40.0%
!! TTCTGTAGCTGCTTTAAGGA+AGG + tig0020520:134909-134928 Msa1382680:CDS 40.0%
GACTTCTGTTTGACATGATC+AGG - tig0020520:135003-135022 None:intergenic 40.0%
ATCAGAAGAAACTTGCAGCA+AGG - tig0020520:135130-135149 None:intergenic 40.0%
CTGCAAGTTTCTTCTGATGT+AGG + tig0020520:135132-135151 Msa1382680:CDS 40.0%
!! TTTGTTCGGTGCTTCTTGTA+CGG - tig0020520:135229-135248 None:intergenic 40.0%
TCCAGACAAACATAAGGAAG+AGG + tig0020520:135260-135279 Msa1382680:CDS 40.0%
ACCTCTTCCTTATGTTTGTC+TGG - tig0020520:135264-135283 None:intergenic 40.0%
CTGAAAGAAGCAGATCATGA+AGG + tig0020520:135288-135307 Msa1382680:CDS 40.0%
!! CAAAAGTGTCAAGAAGTTGC+TGG + tig0020520:135516-135535 Msa1382680:CDS 40.0%
TGGTGAAACAAACCTGATTC+AGG + tig0020520:135536-135555 Msa1382680:CDS 40.0%
GCTCTGTAATTAACCTAGGT+GGG + tig0020520:135652-135671 Msa1382680:CDS 40.0%
ATTGGCTATAAGCCAGAAGA+TGG + tig0020520:135705-135724 Msa1382680:CDS 40.0%
GACTAAATGGTCCATTGATC+AGG + tig0020520:135734-135753 Msa1382680:intron 40.0%
TTGGCATTCTTCCTGATCAA+TGG - tig0020520:135748-135767 None:intergenic 40.0%
TTGAGAGCTATTCAGGAACT+TGG + tig0020520:135773-135792 Msa1382680:CDS 40.0%
GCTATTCAGGAACTTGGAAA+TGG + tig0020520:135779-135798 Msa1382680:CDS 40.0%
ATGTGAATTGACAGAGTCTC+CGG + tig0020520:135871-135890 Msa1382680:CDS 40.0%
!! AAGGAATGCATCTGGTTCTT+GGG + tig0020520:135994-136013 Msa1382680:CDS 40.0%
TCTCTTCATCGTGGTGAATA+TGG - tig0020520:136117-136136 None:intergenic 40.0%
!! GAGGTCATTTTCACAAGCAT+GGG - tig0020520:136197-136216 None:intergenic 40.0%
! ATTTTCTTCCATAGGGTGTG+TGG - tig0020520:136227-136246 None:intergenic 40.0%
! CACTCGCATTTTCTTCCATA+GGG - tig0020520:136234-136253 None:intergenic 40.0%
! TCACTCGCATTTTCTTCCAT+AGG - tig0020520:136235-136254 None:intergenic 40.0%
TGGAAGAAAATGCGAGTGAA+AGG + tig0020520:136236-136255 Msa1382680:CDS 40.0%
GAGTGAAAGGAAAGACAACA+AGG + tig0020520:136249-136268 Msa1382680:CDS 40.0%
TGAAAGGAAAGACAACAAGG+TGG + tig0020520:136252-136271 Msa1382680:CDS 40.0%
GGAGATAAGAGAAGAAGAAC+CGG + tig0020520:136318-136337 Msa1382680:CDS 40.0%
GAGATAAGAGAAGAAGAACC+GGG + tig0020520:136319-136338 Msa1382680:CDS 40.0%
ATAGCTAGAACTGGATTCTG+AGG - tig0020520:136350-136369 None:intergenic 40.0%
! ATCTGGTTCATAGCTAGAAC+TGG - tig0020520:136359-136378 None:intergenic 40.0%
CAGGATGATATAATGGTCAC+AGG + tig0020520:136475-136494 Msa1382680:CDS 40.0%
CTTCATCAAAGTCAGAAGTC+TGG - tig0020520:136585-136604 None:intergenic 40.0%
CAGACTTCTGACTTTGATGA+AGG + tig0020520:136583-136602 Msa1382680:CDS 40.0%
ACACTGTTTCACTGAGTACA+GGG - tig0020520:136612-136631 None:intergenic 40.0%
TACACTGTTTCACTGAGTAC+AGG - tig0020520:136613-136632 None:intergenic 40.0%
GTCAGTTTCACCAACATTTG+TGG - tig0020520:136680-136699 None:intergenic 40.0%
! TGTTGGTGAAACTGACATGA+AGG + tig0020520:136684-136703 Msa1382680:CDS 40.0%
GTGAAACTGACATGAAGGTT+AGG + tig0020520:136689-136708 Msa1382680:intron 40.0%
GCAAAACCAAGATCAGTGTT+TGG + tig0020520:136711-136730 Msa1382680:intron 40.0%
! CCTTTTCCAAACACTGATCT+TGG - tig0020520:136720-136739 None:intergenic 40.0%
CCAAGATCAGTGTTTGGAAA+AGG + tig0020520:136717-136736 Msa1382680:intron 40.0%
TCAGATACCCTTCAAAGAAG+AGG + tig0020520:136883-136902 Msa1382680:CDS 40.0%
TTCACCTCCTCTTCTTTGAA+GGG - tig0020520:136893-136912 None:intergenic 40.0%
TTTCACCTCCTCTTCTTTGA+AGG - tig0020520:136894-136913 None:intergenic 40.0%
TCATCAAACATCCGTGACAA+AGG + tig0020520:136940-136959 Msa1382680:CDS 40.0%
TTCCTTCACTTCCTTTGTCA+CGG - tig0020520:136954-136973 None:intergenic 40.0%
TACCTTCTGTGACTTACCAT+TGG - tig0020520:136978-136997 None:intergenic 40.0%
AATTCGTGAAGCTCGTGAAA+GGG + tig0020520:137081-137100 Msa1382680:CDS 40.0%
! ATTTGCTGATGCAAGAGAGA+GGG + tig0020520:137105-137124 Msa1382680:CDS 40.0%
! ACATTTTGAATGGGCGAGAA+AGG + tig0020520:137167-137186 Msa1382680:CDS 40.0%
! TTGCTTTGTTCCATTGCTTC+TGG - tig0020520:137398-137417 None:intergenic 40.0%
! TCTGAAGTTCGTGATTCTAC+TGG + tig0020520:137555-137574 Msa1382680:intron 40.0%
CTGAAGTTCGTGATTCTACT+GGG + tig0020520:137556-137575 Msa1382680:intron 40.0%
TGAAGTTCGTGATTCTACTG+GGG + tig0020520:137557-137576 Msa1382680:intron 40.0%
ATCACTGTTCTACGTTATGC+AGG + tig0020520:137725-137744 Msa1382680:intron 40.0%
! TCGATCACGCATACTCTTTT+CGG - tig0020520:137763-137782 None:intergenic 40.0%
GATGTTAAAAGGTGGTCAAG+TGG + tig0020520:137906-137925 Msa1382680:CDS 40.0%
TATTGCATATGAACTGGCCA+TGG + tig0020520:138057-138076 Msa1382680:intron 40.0%
GCTTTCCTTGTAAACTTCAG+GGG + tig0020520:138103-138122 Msa1382680:intron 40.0%
TTACTCCCCTGAAGTTTACA+AGG - tig0020520:138111-138130 None:intergenic 40.0%
TTCGAGACTCGAATGAACAA+TGG + tig0020520:138159-138178 Msa1382680:intron 40.0%
TCGAGACTCGAATGAACAAT+GGG + tig0020520:138160-138179 Msa1382680:intron 40.0%
TAGACTCCACAGATAAGCAA+GGG - tig0020520:138196-138215 None:intergenic 40.0%
ATAGACTCCACAGATAAGCA+AGG - tig0020520:138197-138216 None:intergenic 40.0%
ACTTGAATTTCGCAGATCCT+TGG + tig0020520:138494-138513 Msa1382680:intron 40.0%
CTTGAATTTCGCAGATCCTT+GGG + tig0020520:138495-138514 Msa1382680:intron 40.0%
AATTGGTTGCCAACCACTAT+CGG - tig0020520:138522-138541 None:intergenic 40.0%
AGCTTTCTTTACATCAGGTG+TGG - tig0020520:138564-138583 None:intergenic 40.0%
CGGTAAGCTTTCTTTACATC+AGG - tig0020520:138569-138588 None:intergenic 40.0%
! GCAAAAGTACACTTGTGAGA+AGG + tig0020520:138646-138665 Msa1382680:CDS 40.0%
TTGGAGAAAGAACGGTCAAT+GGG - tig0020520:138745-138764 None:intergenic 40.0%
TTTGGAGAAAGAACGGTCAA+TGG - tig0020520:138746-138765 None:intergenic 40.0%
GACCGTTCTTTCTCCAAAAA+TGG + tig0020520:138748-138767 Msa1382680:three_prime_UTR 40.0%
! GACTTTTCCAACGGAATGAG+AGG - tig0020520:132895-132914 None:intergenic 45.0%
! CTTTGTTAGTGTTGAGGTGG+TGG - tig0020520:133090-133109 None:intergenic 45.0%
TCGTCGAATTGAGAGAAGCT+TGG - tig0020520:133191-133210 None:intergenic 45.0%
!! AGCTCTGGAAGTTCGAGAAT+CGG - tig0020520:133257-133276 None:intergenic 45.0%
AACTTCCAGAGCTCAAGGAA+AGG + tig0020520:133264-133283 Msa1382680:CDS 45.0%
ATTCTCCTTTCCTTGAGCTC+TGG - tig0020520:133272-133291 None:intergenic 45.0%
AGAGCTCAAGGAAAGGAGAA+TGG + tig0020520:133271-133290 Msa1382680:CDS 45.0%
! AGACACTGCTGTACCTTTTG+AGG + tig0020520:133355-133374 Msa1382680:CDS 45.0%
! CGTTTCGATGCTTTAGGCTT+CGG - tig0020520:133389-133408 None:intergenic 45.0%
!! CGAAGCCTAAAGCATCGAAA+CGG + tig0020520:133387-133406 Msa1382680:CDS 45.0%
ACTCACCGTTTCGATGCTTT+AGG - tig0020520:133395-133414 None:intergenic 45.0%
ATGGTCTATACCAGCAGCAA+AGG + tig0020520:134384-134403 Msa1382680:CDS 45.0%
!! GAAAAAGCATCCTTTGCTGC+TGG - tig0020520:134397-134416 None:intergenic 45.0%
!!! GCAGCAAAGGATGCTTTTTC+TGG + tig0020520:134397-134416 Msa1382680:CDS 45.0%
CTGGTATTCATTGTGACGAG+GGG + tig0020520:134416-134435 Msa1382680:CDS 45.0%
TGTGACGAGGGGATAAAAGA+AGG + tig0020520:134427-134446 Msa1382680:CDS 45.0%
!! ATGTGCCACTTTGAGATGCT+TGG - tig0020520:134816-134835 None:intergenic 45.0%
TTCTAGGTACGTCGGTGAAT+CGG - tig0020520:134857-134876 None:intergenic 45.0%
TTGAGTCAACCGTGTCTTCT+AGG - tig0020520:134873-134892 None:intergenic 45.0%
! CACGGTTGACTCAAATTCAG+CGG + tig0020520:134879-134898 Msa1382680:CDS 45.0%
! CAGCTTCTGTAGCTGCTTTA+AGG + tig0020520:134905-134924 Msa1382680:CDS 45.0%
GGTTAAGGAATATTGGGAGC+AGG + tig0020520:135422-135441 Msa1382680:CDS 45.0%
GAATATTGGGAGCAGGAGAA+TGG + tig0020520:135429-135448 Msa1382680:CDS 45.0%
GCAGGAGAATGGTGAAGAAA+AGG + tig0020520:135440-135459 Msa1382680:CDS 45.0%
AGTGACAGACAAGAGGTTGA+AGG + tig0020520:135575-135594 Msa1382680:CDS 45.0%
GGCTCTGTAATTAACCTAGG+TGG + tig0020520:135651-135670 Msa1382680:CDS 45.0%
TCCGGAGCTATTAGACAATG+AGG + tig0020520:135889-135908 Msa1382680:CDS 45.0%
CCCTCATTGTCTAATAGCTC+CGG - tig0020520:135893-135912 None:intergenic 45.0%
CCGGAGCTATTAGACAATGA+GGG + tig0020520:135890-135909 Msa1382680:CDS 45.0%
CGGAGCTATTAGACAATGAG+GGG + tig0020520:135891-135910 Msa1382680:CDS 45.0%
TCTGAATGATGAGGACTGCA+CGG - tig0020520:135917-135936 None:intergenic 45.0%
!! GAAGGAATGCATCTGGTTCT+TGG + tig0020520:135993-136012 Msa1382680:CDS 45.0%
ATCAGTGGCTTCTCTCCAAT+AGG - tig0020520:136044-136063 None:intergenic 45.0%
CAATGTCAAGGAAACACTGG+AGG + tig0020520:136081-136100 Msa1382680:CDS 45.0%
!! CGAGGTCATTTTCACAAGCA+TGG - tig0020520:136198-136217 None:intergenic 45.0%
TGCTTGTGAAAATGACCTCG+AGG + tig0020520:136198-136217 Msa1382680:CDS 45.0%
GCTTGTGAAAATGACCTCGA+GGG + tig0020520:136199-136218 Msa1382680:CDS 45.0%
GATTTCTGCGAGAAACATGC+AGG + tig0020520:136559-136578 Msa1382680:CDS 45.0%
CACTGTTTCACTGAGTACAG+GGG - tig0020520:136611-136630 None:intergenic 45.0%
TGTGTCAGATGAAGAGATCG+AGG + tig0020520:136829-136848 Msa1382680:CDS 45.0%
CTGAGATGCTTCACAAGAAG+AGG - tig0020520:136867-136886 None:intergenic 45.0%
GATACCCTTCAAAGAAGAGG+AGG + tig0020520:136886-136905 Msa1382680:CDS 45.0%
ATCCGTGACAAAGGAAGTGA+AGG + tig0020520:136949-136968 Msa1382680:CDS 45.0%
AAGGAAGTGAAGGAAGCCAA+TGG + tig0020520:136959-136978 Msa1382680:CDS 45.0%
AGCCAATGGTAAGTCACAGA+AGG + tig0020520:136973-136992 Msa1382680:CDS 45.0%
TGGTAAGTCACAGAAGGTAG+AGG + tig0020520:136979-136998 Msa1382680:CDS 45.0%
TAAGTCACAGAAGGTAGAGG+TGG + tig0020520:136982-137001 Msa1382680:CDS 45.0%
ACAGAAGGTAGAGGTGGATA+GGG + tig0020520:136988-137007 Msa1382680:CDS 45.0%
CAATTCGTGAAGCTCGTGAA+AGG + tig0020520:137080-137099 Msa1382680:CDS 45.0%
! CATTTGCTGATGCAAGAGAG+AGG + tig0020520:137104-137123 Msa1382680:CDS 45.0%
! TCTGGTCCAGAGAAGTATGT+TGG + tig0020520:137367-137386 Msa1382680:CDS 45.0%
GATGCACCAACATACTTCTC+TGG - tig0020520:137376-137395 None:intergenic 45.0%
!! GGTACCGATATCAGGTAAAG+TGG - tig0020520:137472-137491 None:intergenic 45.0%
GATTCTACTGGGGTCTTTGA+TGG + tig0020520:137567-137586 Msa1382680:CDS 45.0%
CTGCTCAGAGATGTAAAGCT+AGG + tig0020520:137604-137623 Msa1382680:CDS 45.0%
TCCTATTCTCTGATGCCTCT+CGG - tig0020520:137631-137650 None:intergenic 45.0%
TCAGAGAATAGGAGAACGTG+TGG + tig0020520:137638-137657 Msa1382680:CDS 45.0%
GAATAGGAGAACGTGTGGTA+TGG + tig0020520:137643-137662 Msa1382680:intron 45.0%
GTTCTACGTTATGCAGGCAA+AGG + tig0020520:137731-137750 Msa1382680:intron 45.0%
CTCTCGATGCCGATGTTAAA+AGG + tig0020520:137895-137914 Msa1382680:CDS 45.0%
TCGATGCCGATGTTAAAAGG+TGG + tig0020520:137898-137917 Msa1382680:CDS 45.0%
TAAAAGGTGGTCAAGTGGGA+AGG + tig0020520:137911-137930 Msa1382680:CDS 45.0%
CGAGACTCGAATGAACAATG+GGG + tig0020520:138161-138180 Msa1382680:intron 45.0%
GAGACTCGAATGAACAATGG+GGG + tig0020520:138162-138181 Msa1382680:intron 45.0%
AGACTCGAATGAACAATGGG+GGG + tig0020520:138163-138182 Msa1382680:intron 45.0%
! AGAGTACCCTTGCTTATCTG+TGG + tig0020520:138187-138206 Msa1382680:intron 45.0%
ATTGGTTGCCAACCACTATC+GGG - tig0020520:138521-138540 None:intergenic 45.0%
! GCACACAAAGAGTGGCTTTA+CGG - tig0020520:138589-138608 None:intergenic 45.0%
GTAAGCAGATCTTCCGGTGA+CGG - tig0020520:133132-133151 None:intergenic 50.0%
ACCGGAAGATCTGCTTACGA+CGG + tig0020520:133134-133153 Msa1382680:CDS 50.0%
TCTCGAACTTCCAGAGCTCA+AGG + tig0020520:133259-133278 Msa1382680:CDS 50.0%
AAGTGTAAGCAGGGACAGCA+TGG - tig0020520:134321-134340 None:intergenic 50.0%
GACGAGGGGATAAAAGAAGG+TGG + tig0020520:134430-134449 Msa1382680:CDS 50.0%
GATGCATGCGAGACTAGCAA+CGG + tig0020520:134685-134704 Msa1382680:CDS 50.0%
TCTGTTACAGGCTGTGAAGG+AGG - tig0020520:134739-134758 None:intergenic 50.0%
!! GGCACATATGAAAGTGCTGC+TGG + tig0020520:134829-134848 Msa1382680:CDS 50.0%
ACCGACGTACCTAGAAGACA+CGG + tig0020520:134861-134880 Msa1382680:CDS 50.0%
ACCGTGTCTTCTAGGTACGT+CGG - tig0020520:134865-134884 None:intergenic 50.0%
! TGTCAAGTGTCGCCTGAATC+AGG - tig0020520:135551-135570 None:intergenic 50.0%
ATTCAGGCGACACTTGACAG+TGG + tig0020520:135552-135571 Msa1382680:CDS 50.0%
ACAGTGGAGTGACAGACAAG+AGG + tig0020520:135568-135587 Msa1382680:CDS 50.0%
TCATCGACGATTTCCCACCT+AGG - tig0020520:135668-135687 None:intergenic 50.0%
AGGTGGGAAATCGTCGATGA+TGG + tig0020520:135668-135687 Msa1382680:CDS 50.0%
GGTGGGAAATCGTCGATGAT+GGG + tig0020520:135669-135688 Msa1382680:CDS 50.0%
CACAGAAGGTAGAGGTGGAT+AGG + tig0020520:136987-137006 Msa1382680:CDS 50.0%
TCCATTGCAGTCTTCTCAGC+CGG - tig0020520:137226-137245 None:intergenic 50.0%
GTTGGTGCATCCAGAAGCAA+TGG + tig0020520:137385-137404 Msa1382680:CDS 50.0%
GATGTAAAGCTAGGTCCGAG+AGG + tig0020520:137613-137632 Msa1382680:CDS 50.0%
!! TCCGAGAGGCATCAGAGAAT+AGG + tig0020520:137627-137646 Msa1382680:CDS 50.0%
ACTCGTGCAGAAAGAGCAAG+AGG + tig0020520:137782-137801 Msa1382680:CDS 50.0%
ATCGGGATGCACACAAAGAG+TGG - tig0020520:138597-138616 None:intergenic 50.0%
!! GGCTCTGAACTCCATGACGA+CGG - tig0020520:133069-133088 None:intergenic 55.0%
TCCAACAGCTACTCCGTCAC+CGG + tig0020520:133116-133135 Msa1382680:CDS 55.0%
GCCGTCGTAAGCAGATCTTC+CGG - tig0020520:133138-133157 None:intergenic 55.0%
!! CTGGATTCTGAGGTGTTGCC+CGG - tig0020520:136340-136359 None:intergenic 55.0%
ACCGGCTGAGAAGACTGCAA+TGG + tig0020520:137222-137241 Msa1382680:CDS 55.0%
TAAAGCTGAACGCGCTGCTG+TGG + tig0020520:137255-137274 Msa1382680:CDS 55.0%
TGTGGAGAGAGCAACTGCAG+AGG + tig0020520:137273-137292 Msa1382680:CDS 55.0%
GAACTCCATGACGACGGCGA+CGG - tig0020520:133063-133082 None:intergenic 60.0%
!! TCCGGTGACGGAGTAGCTGT+TGG - tig0020520:133120-133139 None:intergenic 60.0%
TGCAAGAGAGAGGGCAGCTC+TGG + tig0020520:137114-137133 Msa1382680:CDS 60.0%
!! AGAGAGGGCAGCTCTGGAGA+GGG + tig0020520:137120-137139 Msa1382680:CDS 60.0%
! AAGAGCACGTGCCCTGGAGA+GGG + tig0020520:137297-137316 Msa1382680:CDS 60.0%
CTCAGACAGTGCCCTCTCCA+GGG - tig0020520:137311-137330 None:intergenic 60.0%
TCTCAGACAGTGCCCTCTCC+AGG - tig0020520:137312-137331 None:intergenic 60.0%
!! GGAGAGGGCACTGTCTGAGA+AGG + tig0020520:137312-137331 Msa1382680:CDS 60.0%
AGGTGGTCAAGTGGGAAGGC+AGG + tig0020520:137915-137934 Msa1382680:CDS 60.0%
CAGATCCTTGGGCCCGATAG+TGG + tig0020520:138506-138525 Msa1382680:intron 60.0%
! TCCTTGGGCCCGATAGTGGT+TGG + tig0020520:138510-138529 Msa1382680:CDS 60.0%
CCTCGCTGCTGCAGCTTATC+GGG - tig0020520:138614-138633 None:intergenic 60.0%
CCCTCGCTGCTGCAGCTTAT+CGG - tig0020520:138615-138634 None:intergenic 60.0%
CCGATAAGCTGCAGCAGCGA+GGG + tig0020520:138612-138631 Msa1382680:CDS 60.0%
CGATAAGCTGCAGCAGCGAG+GGG + tig0020520:138613-138632 Msa1382680:CDS 60.0%
TAGGGTGTGTGGCTCCCTCG+AGG - tig0020520:136216-136235 None:intergenic 65.0%
CGAGGGAGCCACACACCCTA+TGG + tig0020520:136216-136235 Msa1382680:CDS 65.0%
!! GAGAGAGGGCAGCTCTGGAG+AGG + tig0020520:137119-137138 Msa1382680:CDS 65.0%
! AGAGGCAAGAGCACGTGCCC+TGG + tig0020520:137291-137310 Msa1382680:CDS 65.0%
! CAAGAGCACGTGCCCTGGAG+AGG + tig0020520:137296-137315 Msa1382680:CDS 65.0%
GCCAACCACTATCGGGCCCA+AGG - tig0020520:138514-138533 None:intergenic 65.0%
CCCGATAAGCTGCAGCAGCG+AGG + tig0020520:138611-138630 Msa1382680:CDS 65.0%
TCTCGCCGTCGCCGTCGTCA+TGG + tig0020520:133055-133074 Msa1382680:exon 70.0%
Chromosome Type Strat End Strand Name
tig0020520 gene 132884 138816 132884 ID=Msa1382680;Name=Msa1382680
tig0020520 mRNA 132884 138816 132884 ID=Msa1382680-mRNA-1;Parent=Msa1382680;Name=Msa1382680-mRNA-1;_AED=0.03;_eAED=0.03;_QI=190|0.71|0.62|1|1|1|8|83|1339
tig0020520 exon 132884 133408 132884 ID=Msa1382680-mRNA-1:exon:8163;Parent=Msa1382680-mRNA-1
tig0020520 exon 134144 135726 134144 ID=Msa1382680-mRNA-1:exon:8164;Parent=Msa1382680-mRNA-1
tig0020520 exon 135756 136705 135756 ID=Msa1382680-mRNA-1:exon:8165;Parent=Msa1382680-mRNA-1
tig0020520 exon 136776 137448 136776 ID=Msa1382680-mRNA-1:exon:8166;Parent=Msa1382680-mRNA-1
tig0020520 exon 137562 137659 137562 ID=Msa1382680-mRNA-1:exon:8167;Parent=Msa1382680-mRNA-1
tig0020520 exon 137747 137812 137747 ID=Msa1382680-mRNA-1:exon:8168;Parent=Msa1382680-mRNA-1
tig0020520 exon 137882 137971 137882 ID=Msa1382680-mRNA-1:exon:8169;Parent=Msa1382680-mRNA-1
tig0020520 exon 138509 138816 138509 ID=Msa1382680-mRNA-1:exon:8170;Parent=Msa1382680-mRNA-1
tig0020520 five_prime_UTR 132884 133073 132884 ID=Msa1382680-mRNA-1:five_prime_utr;Parent=Msa1382680-mRNA-1
tig0020520 CDS 133074 133408 133074 ID=Msa1382680-mRNA-1:cds;Parent=Msa1382680-mRNA-1
tig0020520 CDS 134144 135726 134144 ID=Msa1382680-mRNA-1:cds;Parent=Msa1382680-mRNA-1
tig0020520 CDS 135756 136705 135756 ID=Msa1382680-mRNA-1:cds;Parent=Msa1382680-mRNA-1
tig0020520 CDS 136776 137448 136776 ID=Msa1382680-mRNA-1:cds;Parent=Msa1382680-mRNA-1
tig0020520 CDS 137562 137659 137562 ID=Msa1382680-mRNA-1:cds;Parent=Msa1382680-mRNA-1
tig0020520 CDS 137747 137812 137747 ID=Msa1382680-mRNA-1:cds;Parent=Msa1382680-mRNA-1
tig0020520 CDS 137882 137971 137882 ID=Msa1382680-mRNA-1:cds;Parent=Msa1382680-mRNA-1
tig0020520 CDS 138509 138733 138509 ID=Msa1382680-mRNA-1:cds;Parent=Msa1382680-mRNA-1
tig0020520 three_prime_UTR 138734 138816 138734 ID=Msa1382680-mRNA-1:three_prime_utr;Parent=Msa1382680-mRNA-1
Gene Sequence

>Msa1382680

ATGGAGTTCAGAGCCACCACCTCAACACTAACAAAGAAGCACTCCAACAGCTACTCCGTCACCGGAAGATCTGCTTACGACGGCGTTTTCGCTACTCCAATCAAGCTAAGAACTCCAAGCTTCTCTCAATTCGACGATTACAACGAGGTTTTCGGTTGCTCAGATGCTTCTTCTTCGATTCCGATTCTCGAACTTCCAGAGCTCAAGGAAAGGAGAATGGTTGAAGATTTTCAGCGTTCAAACCTCGATTATTCGAAAGTCTTCAGCGGTTTCGACAATCTAGACACTGCTGTACCTTTTGAGGAACTGATTCCGAAGCCTAAAGCATCGAAACGGAGCAAAGTCAAAAGTGGAGAACAATCTTGCAGAGAAGATCGTGTTAATTCTTCAAAGGAAATCCCGGTGATATCACCTTCATTCAATGGAGCCAAAACGATCAATATGTCATATCATAAAGTTAACCAAGGAAGTGAAAATGGAACAAATGGGACAACACATATAGCTCAACTCCATGCTGTCCCTGCTTACACTTGTTTAATTGAAGAAGTCAGTTCAGTAAAGACGAGCAGAGCTAAATGGTCTATACCAGCAGCAAAGGATGCTTTTTCTGGTATTCATTGTGACGAGGGGATAAAAGAAGGTGGACGTTGTGATAAATCATCTGTCGATGCTTCATCTAATAATGTCAAGAAACAGTCTACCAACAATGGAGGGAAAGCTATAAATAGATCTGACTCTGTTGATATGTTTTATGATGAAGAAGGTGGACGTTGTGATAAATCATCTGTCCATGCTTCACCTAATAATGTCAAGAAACAGTCTTTCAACAATGGAGGGAAAGCTATAAATAGATCCGACTCTGTTGATATGTTTTATGATGCATGCGAGACTAGCAACGGAAGTGACGCAGTTCATGAAGTCAAAGTTCCTCCTTCACAGCCTGTAACAGATAATTTGGATAATAATAATGACATTGATACTTCGAGATCAACGGCAACCAAATGCCAAGCATCTCAAAGTGGCACATATGAAAGTGCTGCTGGTGCCGATTCACCGACGTACCTAGAAGACACGGTTGACTCAAATTCAGCGGCAGCAGCTTCTGTAGCTGCTTTAAGGAAGGCAATAGAAGAGGCTCAAATGAAAATAAAGGTTGCAAAAGAATCAATGAGAAGAAAGAAAGAAGGCTTTCCTGATCATGTCAAACAGAAGTCTAGTATCAATTTGAAAGTCAGGGAAAAAAAGGAAGCTAAACTTGCATGCAAAACATCGAAAGTTAACGAGATTAATACAAGGCAAACATTTGGAGAAATGGATGCCTTGCTGCAAGTTTCTTCTGATGTAGGAAAGCTACCAATGAGAACAGAGAAAGTAAGATCAGATATCGGGGATAAAGAAATGTGTACTGCAAATGAAGCCGTACAAGAAGCACCGAACAAATTGAAATTGTCTCCAGACAAACATAAGGAAGAGGTTGAACTGAAAGAAGCAGATCATGAAGGAAAAAATTTTGAGCTTAAAGAGGCAGGAAATGCTAAGAAAGACCCTTATATTAAAAACACTGGTAGGAATGCCACTGAAAAACCTGAAGAATCTGATCATACAATTGAAATGGTTAAGGAATATTGGGAGCAGGAGAATGGTGAAGAAAAGGTTCGTGCAGTTAATGAAGCAAGTTATGGTGAAGAACTTGTCCATGAAACTAAACAAAAGTGTCAAGAAGTTGCTGGTGAAACAAACCTGATTCAGGCGACACTTGACAGTGGAGTGACAGACAAGAGGTTGAAGGTTAAAGAAGTTGAAGAAGTTGAGAACAAGGTTACACCGTTTAATGAACCAAAAGGCTCTGTAATTAACCTAGGTGGGAAATCGTCGATGATGGGAAAGAAAAAAAGTATTGGCTATAAGCCAGAAGATGGAAGAATGCCAAAAATATTGAGAGCTATTCAGGAACTTGGAAATGGTGACAAAGAAATTTCTCAAGAGCAAAAAGAAAGTGAGAATAAAGTTGAAGTGGTCAGTGAGTTTGAAGAATGTGAATTGACAGAGTCTCCGGAGCTATTAGACAATGAGGGGCCGTGCAGTCCTCATCATTCAGAATTAATAAGCATGGACAAAGAAATATATAATTCAGTGTGTTTAGAAGACAAAAAGAGAAGGAATGCATCTGGTTCTTGGGATGTAAATCAAGAGGTAGAACATTCCTATTGGAGAGAAGCCACTGATAGTACGTTTAGCAATATCAATGTCAAGGAAACACTGGAGGACATAGTTGACCATATTCACCACGATGAAGAGATTTATGAAAGAAATGCAAAGGCTAGTGATTTAAATGGAAATGTGAGGCTTCAAGATGCCCATGCTTGTGAAAATGACCTCGAGGGAGCCACACACCCTATGGAAGAAAATGCGAGTGAAAGGAAAGACAACAAGGTGGTGCTTGAAGTAATTATAGAGACTCAAACTGATCTAATTTATGAGGAGATAAGAGAAGAAGAACCGGGCAACACCTCAGAATCCAGTTCTAGCTATGAACCAGATGAAACTGAGAAGTTGAACAAAACACAGGTTTCTAATACAGTAAATGAAAATGATGAAACTCTTGAAGTAACTCCAGAGTTTTATTCATGTGATCTGCAGGATGATATAATGGTCACAGGTAATGCTTCAGTACAACATCAAGAGAAATATGAAGAGCCAGAATCTGTTCAAGTTACTAATGATTTCTGCGAGAAACATGCAGGCCAGACTTCTGACTTTGATGAAGGTGCCCCTGTACTCAGTGAAACAGTGTATCAAATGAACAGTACATTTGAAACAGTTGCCATTGACAATGATTCCACAAATGTTGGTGAAACTGACATGAAGAAAACAACTCCTGAGTCTATAGAAATATGTATGGATGCAAAGGAGGATAGAGTTGTGTCAGATGAAGAGATCGAGGATAATAGATCTACCTCTTCTTGTGAAGCATCTCAGATACCCTTCAAAGAAGAGGAGGTGAAATCAATTCCCAGCAAAATAAAGGAGAGTCATCAAACATCCGTGACAAAGGAAGTGAAGGAAGCCAATGGTAAGTCACAGAAGGTAGAGGTGGATAGGGAACTTCTCAAGAAAATCGATGAAGTAAAGAATAGAGAAAGAGAAAAGGAGAAATTAGCTGTAGAAAGAGCAATTCGTGAAGCTCGTGAAAGGGCATTTGCTGATGCAAGAGAGAGGGCAGCTCTGGAGAGGGTTGCAGCTGAAGCACGTCAAAAGAACATTTTGAATGGGCGAGAAAGGCTAAAAACCACTTGTCAAGCAAATGAGAAAACACCGGCTGAGAAGACTGCAATGGAAGCAAAACTTAAAGCTGAACGCGCTGCTGTGGAGAGAGCAACTGCAGAGGCAAGAGCACGTGCCCTGGAGAGGGCACTGTCTGAGAAGGCTGCTTCTGATGCAAAAAATAAATATGACAAGTCTGGTCCAGAGAAGTATGTTGGTGCATCCAGAAGCAATGGAACAAAGCAAAACGGCCATTCAAAATCTTTCAGCTATGGTGTTCGTGATTCTACTGGGGTCTTTGATGGAGCTAATGCTGACTCTGCTCAGAGATGTAAAGCTAGGTCCGAGAGGCATCAGAGAATAGGAGAACGTGTGGCAAAGGCTCTTGCCGAAAAGAGTATGCGTGATCGACTCGTGCAGAAAGAGCAAGAGGAGAGACATAGGGTAGCTGAAGCTCTCGATGCCGATGTTAAAAGGTGGTCAAGTGGGAAGGCAGGAAACTTGAGAGCATTGCTTTCGACATTACAATATATCCTTGGGCCCGATAGTGGTTGGCAACCAATTCCTTTAACAGCAATAGTAACCACACCTGATGTAAAGAAAGCTTACCGTAAAGCCACTCTTTGTGTGCATCCCGATAAGCTGCAGCAGCGAGGGGCTAGCATTCAGCAAAAGTACACTTGTGAGAAGGTTTTTGATCTTCTAAAGGTTTGTGGTCTTCATCCATCATTAAACAACATGAAAATTGGTTCTTGA
Protein sequence

>Msa1382680

MEFRATTSTLTKKHSNSYSVTGRSAYDGVFATPIKLRTPSFSQFDDYNEVFGCSDASSSIPILELPELKERRMVEDFQRSNLDYSKVFSGFDNLDTAVPFEELIPKPKASKRSKVKSGEQSCREDRVNSSKEIPVISPSFNGAKTINMSYHKVNQGSENGTNGTTHIAQLHAVPAYTCLIEEVSSVKTSRAKWSIPAAKDAFSGIHCDEGIKEGGRCDKSSVDASSNNVKKQSTNNGGKAINRSDSVDMFYDEEGGRCDKSSVHASPNNVKKQSFNNGGKAINRSDSVDMFYDACETSNGSDAVHEVKVPPSQPVTDNLDNNNDIDTSRSTATKCQASQSGTYESAAGADSPTYLEDTVDSNSAAAASVAALRKAIEEAQMKIKVAKESMRRKKEGFPDHVKQKSSINLKVREKKEAKLACKTSKVNEINTRQTFGEMDALLQVSSDVGKLPMRTEKVRSDIGDKEMCTANEAVQEAPNKLKLSPDKHKEEVELKEADHEGKNFELKEAGNAKKDPYIKNTGRNATEKPEESDHTIEMVKEYWEQENGEEKVRAVNEASYGEELVHETKQKCQEVAGETNLIQATLDSGVTDKRLKVKEVEEVENKVTPFNEPKGSVINLGGKSSMMGKKKSIGYKPEDGRMPKILRAIQELGNGDKEISQEQKESENKVEVVSEFEECELTESPELLDNEGPCSPHHSELISMDKEIYNSVCLEDKKRRNASGSWDVNQEVEHSYWREATDSTFSNINVKETLEDIVDHIHHDEEIYERNAKASDLNGNVRLQDAHACENDLEGATHPMEENASERKDNKVVLEVIIETQTDLIYEEIREEEPGNTSESSSSYEPDETEKLNKTQVSNTVNENDETLEVTPEFYSCDLQDDIMVTGNASVQHQEKYEEPESVQVTNDFCEKHAGQTSDFDEGAPVLSETVYQMNSTFETVAIDNDSTNVGETDMKKTTPESIEICMDAKEDRVVSDEEIEDNRSTSSCEASQIPFKEEEVKSIPSKIKESHQTSVTKEVKEANGKSQKVEVDRELLKKIDEVKNREREKEKLAVERAIREARERAFADARERAALERVAAEARQKNILNGRERLKTTCQANEKTPAEKTAMEAKLKAERAAVERATAEARARALERALSEKAASDAKNKYDKSGPEKYVGASRSNGTKQNGHSKSFSYGVRDSTGVFDGANADSAQRCKARSERHQRIGERVAKALAEKSMRDRLVQKEQEERHRVAEALDADVKRWSSGKAGNLRALLSTLQYILGPDSGWQPIPLTAIVTTPDVKKAYRKATLCVHPDKLQQRGASIQQKYTCEKVFDLLKVCGLHPSLNNMKIGS*