Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1374180 | XP_013466131.1 | 95.845 | 1372 | 49 | 4 | 1 | 1368 | 1 | 1368 | 0.0 | 2680 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1374180 | sp|Q9FWS1|AUL1_ARATH | 57.962 | 314 | 117 | 7 | 1062 | 1368 | 1145 | 1450 | 3.63e-88 | 319 |
Msa1374180 | sp|Q9FWS1|AUL1_ARATH | 30.310 | 452 | 235 | 20 | 1 | 438 | 1 | 386 | 1.44e-28 | 129 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1374180 | A0A072VPW1 | 95.845 | 1372 | 49 | 4 | 1 | 1368 | 1 | 1368 | 0.0 | 2680 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003520 | Msa1374180 | 0.930321 | 1.942907e-93 | -8.615850e-47 |
Msa0089870 | Msa1374180 | 0.802991 | 4.314224e-49 | -8.615850e-47 |
Msa1374180 | Msa1379850 | 0.810501 | 1.117189e-50 | -8.615850e-47 |
Msa1374180 | Msa1382680 | 0.973694 | 7.284336e-137 | -8.615850e-47 |
Msa1374180 | Msa1392790 | 0.816720 | 4.781187e-52 | -8.615850e-47 |
Msa1374180 | Msa1400120 | 0.810483 | 1.127028e-50 | -8.615850e-47 |
Msa1374180 | Msa1401270 | 0.819388 | 1.192548e-52 | -8.615850e-47 |
Msa1374180 | Msa1440740 | 0.802013 | 6.860564e-49 | -8.615850e-47 |
Msa0631330 | Msa1374180 | 0.806177 | 9.337392e-50 | -8.615850e-47 |
Msa0648100 | Msa1374180 | 0.816888 | 4.384868e-52 | -8.615850e-47 |
Msa0689250 | Msa1374180 | 0.826967 | 2.028375e-54 | -8.615850e-47 |
Msa0691240 | Msa1374180 | 0.818112 | 2.323502e-52 | -8.615850e-47 |
Msa0713880 | Msa1374180 | 0.800842 | 1.191926e-48 | -8.615850e-47 |
Msa0146430 | Msa1374180 | 0.925601 | 1.470087e-90 | -8.615850e-47 |
Msa0191890 | Msa1374180 | 0.817248 | 3.639288e-52 | -8.615850e-47 |
Msa0198560 | Msa1374180 | 0.821210 | 4.557371e-53 | -8.615850e-47 |
Msa0204840 | Msa1374180 | 0.819318 | 1.236692e-52 | -8.615850e-47 |
Msa0219590 | Msa1374180 | 0.803832 | 2.887851e-49 | -8.615850e-47 |
Msa1243920 | Msa1374180 | 0.809913 | 1.496021e-50 | -8.615850e-47 |
Msa1325060 | Msa1374180 | 0.851087 | 1.115187e-60 | -8.615850e-47 |
Msa0436370 | Msa1374180 | 0.808597 | 2.864883e-50 | -8.615850e-47 |
Msa0468270 | Msa1374180 | 0.800017 | 1.755336e-48 | -8.615850e-47 |
Msa0468800 | Msa1374180 | 0.800316 | 1.526328e-48 | -8.615850e-47 |
Msa1014010 | Msa1374180 | 0.852477 | 4.498836e-61 | -8.615850e-47 |
Msa1043420 | Msa1374180 | 0.807803 | 4.228797e-50 | -8.615850e-47 |
Msa1043480 | Msa1374180 | 0.813352 | 2.673773e-51 | -8.615850e-47 |
Msa1043610 | Msa1374180 | 0.972929 | 1.417049e-135 | -8.615850e-47 |
Msa1093480 | Msa1374180 | 0.837562 | 4.832353e-57 | -8.615850e-47 |
Msa0241240 | Msa1374180 | 0.837682 | 4.499273e-57 | -8.615850e-47 |
Msa0244880 | Msa1374180 | 0.801638 | 8.191670e-49 | -8.615850e-47 |
Msa0283470 | Msa1374180 | 0.800790 | 1.221403e-48 | -8.615850e-47 |
Msa0312530 | Msa1374180 | 0.801544 | 8.565285e-49 | -8.615850e-47 |
Msa0347950 | Msa1374180 | 0.803867 | 2.839548e-49 | -8.615850e-47 |
Msa1189820 | Msa1374180 | 0.821138 | 4.734353e-53 | -8.615850e-47 |
Msa0572480 | Msa1374180 | 0.818046 | 2.404092e-52 | -8.615850e-47 |
Msa0902710 | Msa1374180 | 0.822792 | 1.959852e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1374180 | MtrunA17_Chr1g0155381 | 95.845 | 1372 | 49 | 4 | 1 | 1368 | 1 | 1368 | 0.0 | 2680 |
Msa1374180 | MtrunA17_Chr8g0372931 | 48.705 | 386 | 161 | 9 | 1016 | 1368 | 1058 | 1439 | 5.73e-86 | 308 |
Msa1374180 | MtrunA17_Chr8g0372931 | 27.295 | 414 | 238 | 17 | 24 | 430 | 28 | 385 | 4.09e-18 | 90.9 |
Msa1374180 | MtrunA17_Chr8g0384651 | 64.744 | 156 | 55 | 0 | 1212 | 1367 | 756 | 911 | 3.64e-59 | 221 |
Msa1374180 | MtrunA17_Chr3g0130631 | 64.103 | 156 | 56 | 0 | 1212 | 1367 | 578 | 733 | 6.83e-59 | 217 |
Msa1374180 | MtrunA17_Chr3g0125121 | 51.337 | 187 | 80 | 3 | 1191 | 1367 | 334 | 519 | 2.26e-52 | 193 |
Msa1374180 | MtrunA17_Chr3g0141421 | 56.383 | 94 | 41 | 0 | 1272 | 1365 | 596 | 689 | 5.39e-32 | 134 |
Msa1374180 | MtrunA17_Chr2g0304091 | 53.125 | 96 | 45 | 0 | 1272 | 1367 | 357 | 452 | 9.49e-28 | 118 |
Msa1374180 | MtrunA17_Chr8g0376701 | 51.042 | 96 | 47 | 0 | 1272 | 1367 | 364 | 459 | 8.39e-27 | 115 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1374180 | AT1G75310.2 | 58.466 | 313 | 118 | 6 | 1062 | 1368 | 1145 | 1451 | 8.29e-90 | 321 |
Msa1374180 | AT1G75310.2 | 30.310 | 452 | 235 | 20 | 1 | 438 | 1 | 386 | 1.41e-29 | 129 |
Msa1374180 | AT1G75310.1 | 57.643 | 314 | 116 | 7 | 1062 | 1368 | 1145 | 1448 | 1.05e-88 | 317 |
Msa1374180 | AT1G75310.1 | 30.310 | 452 | 235 | 20 | 1 | 438 | 1 | 386 | 1.33e-29 | 129 |
Msa1374180 | AT4G36520.1 | 49.162 | 358 | 148 | 10 | 1032 | 1368 | 1078 | 1422 | 8.25e-79 | 287 |
Msa1374180 | AT4G36520.1 | 31.481 | 216 | 104 | 9 | 7 | 181 | 13 | 225 | 1.33e-17 | 89.7 |
Msa1374180 | AT4G12780.3 | 61.333 | 150 | 58 | 0 | 1218 | 1367 | 726 | 875 | 4.66e-51 | 196 |
Msa1374180 | AT4G12780.1 | 61.333 | 150 | 58 | 0 | 1218 | 1367 | 753 | 902 | 5.42e-51 | 196 |
Msa1374180 | AT4G12770.2 | 59.615 | 156 | 62 | 1 | 1212 | 1367 | 733 | 887 | 5.69e-51 | 196 |
Msa1374180 | AT4G12770.1 | 60.667 | 150 | 59 | 0 | 1218 | 1367 | 740 | 889 | 6.31e-51 | 196 |
Msa1374180 | AT4G12780.2 | 56.287 | 167 | 56 | 2 | 1218 | 1367 | 726 | 892 | 7.51e-48 | 186 |
Msa1374180 | AT1G21660.1 | 53.521 | 142 | 66 | 0 | 1226 | 1367 | 380 | 521 | 1.75e-45 | 173 |
Msa1374180 | AT1G75100.1 | 59.341 | 91 | 37 | 0 | 1274 | 1364 | 556 | 646 | 1.45e-31 | 133 |
Msa1374180 | AT1G30280.1 | 50.000 | 84 | 41 | 1 | 1278 | 1360 | 361 | 444 | 1.22e-18 | 91.3 |
Msa1374180 | AT1G30280.2 | 47.253 | 91 | 44 | 3 | 1278 | 1365 | 361 | 450 | 3.31e-16 | 83.6 |
Find 272 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCTTCTGTAGCTGCTTTA+AGG | 0.107747 | tig0019465:+169250 | Msa1374180:CDS |
CCCTCGCTGCTGCAGCTTAT+CGG | 0.205621 | tig0019465:-172959 | None:intergenic |
ACAGCCTGTAACAGATAATT+TGG | 0.210029 | tig0019465:+169089 | Msa1374180:CDS |
TTGAAATGGTTAAGGAATAT+TGG | 0.215083 | tig0019465:+169760 | Msa1374180:CDS |
TTATCCAAATTATCTGTTAC+AGG | 0.228191 | tig0019465:-169093 | None:intergenic |
TTGAGTCAACCGTGTCTTCT+AGG | 0.241410 | tig0019465:-169215 | None:intergenic |
TTAGTAACTTGAACAGATTC+TGG | 0.251253 | tig0019465:-170881 | None:intergenic |
AATTATTCCTTGATTAATAA+AGG | 0.263834 | tig0019465:-173629 | None:intergenic |
TTGCTTTGTTCCATTGCTTC+TGG | 0.266976 | tig0019465:-171740 | None:intergenic |
GTTAACCAAGGAAGTGAAAA+TGG | 0.270117 | tig0019465:+168610 | Msa1374180:CDS |
GACTGTTTCTTGACATTATT+AGG | 0.275632 | tig0019465:-168952 | None:intergenic |
GATTCTACTGGGGTCTTTGA+TGG | 0.278154 | tig0019465:+171913 | Msa1374180:CDS |
GCAAAGGCTAGTGATTTAAA+TGG | 0.292351 | tig0019465:+170497 | Msa1374180:CDS |
CTCTCGATGCCGATGTTAAA+AGG | 0.297624 | tig0019465:+172241 | Msa1374180:CDS |
ATATGACATATTGATCGTTT+TGG | 0.308968 | tig0019465:-168581 | None:intergenic |
ACTATTGCTGTTAAAGGAAT+TGG | 0.313533 | tig0019465:-172883 | None:intergenic |
TGAAATGGTTAAGGAATATT+GGG | 0.315628 | tig0019465:+169761 | Msa1374180:CDS |
TCTCTTCATCGTGGTGAATA+TGG | 0.316778 | tig0019465:-170460 | None:intergenic |
CTTGGAGTTCTTAGCTTGAT+TGG | 0.316936 | tig0019465:-167515 | None:intergenic |
ACCTCTTCCTTATGTTTGTC+TGG | 0.323897 | tig0019465:-169606 | None:intergenic |
TCTGAAGTTCGTGATTCTAC+TGG | 0.332930 | tig0019465:+171901 | Msa1374180:intron |
CTTACTTTCTCTGTTCTCAT+TGG | 0.337977 | tig0019465:-169507 | None:intergenic |
TTCAACTTCTCAGTTTCATC+TGG | 0.344128 | tig0019465:-170719 | None:intergenic |
CTAGTATCAATTTGAAAGTC+AGG | 0.344292 | tig0019465:+169367 | Msa1374180:CDS |
GTGGTTACTATTGCTGTTAA+AGG | 0.345660 | tig0019465:-172889 | None:intergenic |
ATCAATTCCCAGCAAAATAA+AGG | 0.348948 | tig0019465:+171258 | Msa1374180:CDS |
ATTGTATGATCAGATTCTTC+AGG | 0.350719 | tig0019465:-169738 | None:intergenic |
GAAGGAATGCATCTGGTTCT+TGG | 0.351045 | tig0019465:+170339 | Msa1374180:CDS |
CCTCGCTGCTGCAGCTTATC+GGG | 0.364311 | tig0019465:-172958 | None:intergenic |
GGAAGTGAAAATGGAACAAA+TGG | 0.368141 | tig0019465:+168619 | Msa1374180:CDS |
TCTCAGACAGTGCCCTCTCC+AGG | 0.368364 | tig0019465:-171654 | None:intergenic |
ATCTGGTTCATAGCTAGAAC+TGG | 0.372127 | tig0019465:-170702 | None:intergenic |
TTGGCATTCTTCCTGATCAA+TGG | 0.376138 | tig0019465:-170090 | None:intergenic |
TTTCACCTCCTCTTCTTTGA+AGG | 0.377050 | tig0019465:-171236 | None:intergenic |
TGCAAGAGAGAGGGCAGCTC+TGG | 0.378359 | tig0019465:+171459 | Msa1374180:CDS |
TGTCAAGTGTCGCCTGAATC+AGG | 0.382236 | tig0019465:-169893 | None:intergenic |
CGTTTCGATGCTTTAGGCTT+CGG | 0.382721 | tig0019465:-167731 | None:intergenic |
CGGTAAGCTTTCTTTACATC+AGG | 0.383896 | tig0019465:-172913 | None:intergenic |
AAGGCAAACATTTGGAGAAA+TGG | 0.384101 | tig0019465:+169446 | Msa1374180:CDS |
GAGAAAGTAAGATCAGATAT+CGG | 0.385527 | tig0019465:+169519 | Msa1374180:CDS |
CTTGAATTTCGCAGATCCTT+GGG | 0.387936 | tig0019465:+172842 | Msa1374180:intron |
GACTTCTGTTTGACATGATC+AGG | 0.389147 | tig0019465:-169345 | None:intergenic |
TGGTGAAACAAACCTGATTC+AGG | 0.391490 | tig0019465:+169881 | Msa1374180:CDS |
ATGAAGTAGGCAAATTTAGA+AGG | 0.391541 | tig0019465:+173505 | Msa1374180:three_prime_UTR |
CTGCAAGTTTCTTCTGATGT+AGG | 0.393651 | tig0019465:+169477 | Msa1374180:CDS |
GTCAGTTTCACCAACATTTG+TGG | 0.394233 | tig0019465:-171023 | None:intergenic |
CTGAAGTTCGTGATTCTACT+GGG | 0.396066 | tig0019465:+171902 | Msa1374180:intron |
ACTTTGAGATGCTTGGCATT+TGG | 0.397058 | tig0019465:-169151 | None:intergenic |
GCACACAAAGAGTGGCTTTA+CGG | 0.399428 | tig0019465:-172933 | None:intergenic |
AAATAAGCCTTTATTAATCA+AGG | 0.399742 | tig0019465:+173622 | Msa1374180:three_prime_UTR |
ACTCACCGTTTCGATGCTTT+AGG | 0.400557 | tig0019465:-167737 | None:intergenic |
AGGTTAATTACAGAGCCTTT+TGG | 0.402036 | tig0019465:-169990 | None:intergenic |
ATTAATACAAGGCAAACATT+TGG | 0.403690 | tig0019465:+169438 | Msa1374180:CDS |
GGAGACAATTTCAATTTGTT+CGG | 0.404035 | tig0019465:-169585 | None:intergenic |
TTCTAGGTACGTCGGTGAAT+CGG | 0.404391 | tig0019465:-169199 | None:intergenic |
TATAGCTTTCCCTCCATTGT+TGG | 0.405404 | tig0019465:-168854 | None:intergenic |
CTTTGTTAGTGTTGAGGTGG+TGG | 0.408432 | tig0019465:-167432 | None:intergenic |
TTGAGAGCTATTCAGGAACT+TGG | 0.413355 | tig0019465:+170119 | Msa1374180:CDS |
CAGATCCTTGGGCCCGATAG+TGG | 0.417009 | tig0019465:+172853 | Msa1374180:intron |
AGAGGCTCAAATGAAAATAA+AGG | 0.417325 | tig0019465:+169284 | Msa1374180:CDS |
ATCTGATCATACAATTGAAA+TGG | 0.417927 | tig0019465:+169746 | Msa1374180:CDS |
ACTTGAATTTCGCAGATCCT+TGG | 0.423963 | tig0019465:+172841 | Msa1374180:intron |
GCAAAACCAAGATCAGTGTT+TGG | 0.424713 | tig0019465:+171057 | Msa1374180:CDS |
GACTAAATGGTCCATTGATC+AGG | 0.429201 | tig0019465:+170079 | Msa1374180:CDS |
GGAGATAAGAGAAGAAGAAC+CGG | 0.431525 | tig0019465:+170664 | Msa1374180:CDS |
ATTCTCCTTTCCTTGAGCTC+TGG | 0.432096 | tig0019465:-167614 | None:intergenic |
AAGAGGTAGAACATTCCTAT+TGG | 0.433303 | tig0019465:+170372 | Msa1374180:CDS |
TCATACAATTGAAATGGTTA+AGG | 0.433305 | tig0019465:+169752 | Msa1374180:CDS |
TTCCTTCACTTCCTTTGTCA+CGG | 0.434366 | tig0019465:-171296 | None:intergenic |
TAAAGACGAGCAGAGCTAAA+TGG | 0.438524 | tig0019465:+168710 | Msa1374180:CDS |
TACCTTCTGTGACTTACCAT+TGG | 0.438804 | tig0019465:-171320 | None:intergenic |
AAGGAATGCATCTGGTTCTT+GGG | 0.441677 | tig0019465:+170340 | Msa1374180:CDS |
CTGGATTCTGAGGTGTTGCC+CGG | 0.443227 | tig0019465:-170683 | None:intergenic |
CCACAGAGTGCATGACCATC+AGG | 0.447760 | tig0019465:-173432 | None:intergenic |
TCCATTGCAGTCTTCTCAGC+CGG | 0.447833 | tig0019465:-171568 | None:intergenic |
ATTTGTGGAATCATTGTCAA+TGG | 0.449575 | tig0019465:-171008 | None:intergenic |
AAAGAATAGAGAAAGAGAAA+AGG | 0.450397 | tig0019465:+171381 | Msa1374180:CDS |
GATGCACCAACATACTTCTC+TGG | 0.450847 | tig0019465:-171718 | None:intergenic |
TCAATTAAACAAGTGTAAGC+AGG | 0.451248 | tig0019465:-168673 | None:intergenic |
TCCTATTCTCTGATGCCTCT+CGG | 0.453315 | tig0019465:-171974 | None:intergenic |
AGAAAGTAAGATCAGATATC+GGG | 0.453718 | tig0019465:+169520 | Msa1374180:CDS |
TTTGTTCGGTGCTTCTTGTA+CGG | 0.456160 | tig0019465:-169571 | None:intergenic |
TTCACCTCCTCTTCTTTGAA+GGG | 0.458847 | tig0019465:-171235 | None:intergenic |
AATTGGTTGCCAACCACTAT+CGG | 0.462991 | tig0019465:-172866 | None:intergenic |
AGGTGGGAAATCGTCGATGA+TGG | 0.467613 | tig0019465:+170013 | Msa1374180:CDS |
GTGATATCACCTTCATTCAA+TGG | 0.473045 | tig0019465:+168556 | Msa1374180:CDS |
AGCTCTGGAAGTTCGAGAAT+CGG | 0.475743 | tig0019465:-167599 | None:intergenic |
CAGACTTCTGACTTTGATGA+AGG | 0.476599 | tig0019465:+170929 | Msa1374180:CDS |
AGTTGAAGAAGTTGAGAACA+AGG | 0.478684 | tig0019465:+169950 | Msa1374180:CDS |
CCCTCATTGTCTAATAGCTC+CGG | 0.479146 | tig0019465:-170236 | None:intergenic |
CAAAAGTGTCAAGAAGTTGC+TGG | 0.481130 | tig0019465:+169861 | Msa1374180:CDS |
CCGATAAGCTGCAGCAGCGA+GGG | 0.484078 | tig0019465:+172959 | Msa1374180:CDS |
CACAGAAGGTAGAGGTGGAT+AGG | 0.484797 | tig0019465:+171332 | Msa1374180:CDS |
CCAAGATCAGTGTTTGGAAA+AGG | 0.486328 | tig0019465:+171063 | Msa1374180:CDS |
TCAAACTGATCTAATTTATG+AGG | 0.490972 | tig0019465:+170643 | Msa1374180:CDS |
TTCGGAATCAGTTCCTCAAA+AGG | 0.494615 | tig0019465:-167713 | None:intergenic |
CGAGGGAGCCACACACCCTA+TGG | 0.495109 | tig0019465:+170562 | Msa1374180:CDS |
TGAGTCTATAGAAATATGTA+TGG | 0.500843 | tig0019465:+171132 | Msa1374180:CDS |
TCTCGCCGTCGCCGTCGTCA+TGG | 0.501464 | tig0019465:+167400 | Msa1374180:exon |
GCTATTCAGGAACTTGGAAA+TGG | 0.501968 | tig0019465:+170125 | Msa1374180:CDS |
CTTCATCAAAGTCAGAAGTC+TGG | 0.502637 | tig0019465:-170928 | None:intergenic |
TGATCTGCAGGATGATATAA+TGG | 0.503126 | tig0019465:+170814 | Msa1374180:CDS |
CATTCAAAATCTTTCAGCTA+TGG | 0.503489 | tig0019465:+171769 | Msa1374180:CDS |
TACACTGTTTCACTGAGTAC+AGG | 0.506736 | tig0019465:-170956 | None:intergenic |
GTGAAACTGACATGAAGGTT+AGG | 0.506937 | tig0019465:+171035 | Msa1374180:CDS |
ATTGATGTCTTCAGGAAGCA+TGG | 0.507037 | tig0019465:+173360 | Msa1374180:intron |
GAATATTGGGAGCAGGAGAA+TGG | 0.507785 | tig0019465:+169774 | Msa1374180:CDS |
ACAGAAGGTAGAGGTGGATA+GGG | 0.508513 | tig0019465:+171333 | Msa1374180:CDS |
AGGTGGTCAAGTGGGAAGGC+AGG | 0.509799 | tig0019465:+172261 | Msa1374180:CDS |
GCAGGAGAATGGTGAAGAAA+AGG | 0.512746 | tig0019465:+169785 | Msa1374180:CDS |
ATCAGTGGCTTCTCTCCAAT+AGG | 0.513023 | tig0019465:-170387 | None:intergenic |
CTCAGACAGTGCCCTCTCCA+GGG | 0.513165 | tig0019465:-171653 | None:intergenic |
TCCGAGAGGCATCAGAGAAT+AGG | 0.514883 | tig0019465:+171973 | Msa1374180:CDS |
CTGAGATGCTTCACAAGAAG+AGG | 0.516080 | tig0019465:-171209 | None:intergenic |
AGAGGCAAGAGCACGTGCCC+TGG | 0.516970 | tig0019465:+171636 | Msa1374180:CDS |
GCCGTCGTAAGCAGATCTTC+CGG | 0.518660 | tig0019465:-167480 | None:intergenic |
AGAAATATGTATGGATGCAA+AGG | 0.520243 | tig0019465:+171141 | Msa1374180:CDS |
ATGTGAATTGACAGAGTCTC+CGG | 0.521094 | tig0019465:+170217 | Msa1374180:CDS |
ATTGGTTGCCAACCACTATC+GGG | 0.521170 | tig0019465:-172865 | None:intergenic |
AAGTGAGAATAAAGTTGAAG+TGG | 0.522061 | tig0019465:+170178 | Msa1374180:CDS |
GGCTCTGTAATTAACCTAGG+TGG | 0.523520 | tig0019465:+169996 | Msa1374180:CDS |
GGTTAAGGAATATTGGGAGC+AGG | 0.526989 | tig0019465:+169767 | Msa1374180:CDS |
TCCGGTGACGGAGTAGCTGT+TGG | 0.527818 | tig0019465:-167462 | None:intergenic |
TCAATGAGAAGAAAGAAAGA+AGG | 0.527897 | tig0019465:+169318 | Msa1374180:CDS |
ACAGATTCAACATGGAAGAA+AGG | 0.528950 | tig0019465:+173384 | Msa1374180:CDS |
ACACCGTTTAATGAACCAAA+AGG | 0.529177 | tig0019465:+169975 | Msa1374180:CDS |
ATGTTAATTGTGCTTCCTGA+TGG | 0.531295 | tig0019465:+173417 | Msa1374180:three_prime_UTR |
TTTCTCATTTGCTTGACAAG+TGG | 0.531448 | tig0019465:-171542 | None:intergenic |
ATTGTCTCCAGACAAACATA+AGG | 0.533755 | tig0019465:+169599 | Msa1374180:CDS |
AAGAGCACGTGCCCTGGAGA+GGG | 0.533837 | tig0019465:+171642 | Msa1374180:CDS |
TGACATTATTAGGTGAAGCA+TGG | 0.537366 | tig0019465:-168942 | None:intergenic |
TCCAACAGCTACTCCGTCAC+CGG | 0.538771 | tig0019465:+167461 | Msa1374180:CDS |
GCTCTGTAATTAACCTAGGT+GGG | 0.540673 | tig0019465:+169997 | Msa1374180:CDS |
TGGAAGAAAATGCGAGTGAA+AGG | 0.540789 | tig0019465:+170582 | Msa1374180:CDS |
GTGCTTCTTTGTTAGTGTTG+AGG | 0.541232 | tig0019465:-167438 | None:intergenic |
TATAGGAGCAAAGTCAAAAG+TGG | 0.544215 | tig0019465:+168484 | Msa1374180:intron |
GACAATGATTCCACAAATGT+TGG | 0.545389 | tig0019465:+171013 | Msa1374180:CDS |
TTATCTGTTACAGGCTGTGA+AGG | 0.546462 | tig0019465:-169084 | None:intergenic |
TTGAATGAAGGTGATATCAC+CGG | 0.549105 | tig0019465:-168553 | None:intergenic |
CAATTCGTGAAGCTCGTGAA+AGG | 0.549174 | tig0019465:+171425 | Msa1374180:CDS |
AGATCGTGTTAATTCTTCAA+AGG | 0.551548 | tig0019465:+168525 | Msa1374180:CDS |
CCCGATAAGCTGCAGCAGCG+AGG | 0.552225 | tig0019465:+172958 | Msa1374180:CDS |
AGCAATGGAACAAAGCAAAA+CGG | 0.552231 | tig0019465:+171745 | Msa1374180:CDS |
CTGCTCAGAGATGTAAAGCT+AGG | 0.553857 | tig0019465:+171950 | Msa1374180:CDS |
ATGTGCCACTTTGAGATGCT+TGG | 0.554499 | tig0019465:-169158 | None:intergenic |
GGAGAGGGCACTGTCTGAGA+AGG | 0.555104 | tig0019465:+171657 | Msa1374180:CDS |
TTCTGTAGCTGCTTTAAGGA+AGG | 0.556360 | tig0019465:+169254 | Msa1374180:CDS |
ATTGGCTATAAGCCAGAAGA+TGG | 0.556595 | tig0019465:+170050 | Msa1374180:CDS |
AACAGTCTTTCAACAATGGA+GGG | 0.557749 | tig0019465:+168968 | Msa1374180:CDS |
ATGGTCTATACCAGCAGCAA+AGG | 0.559400 | tig0019465:+168729 | Msa1374180:CDS |
TATCAATGTCAAGGAAACAC+TGG | 0.561651 | tig0019465:+170424 | Msa1374180:CDS |
ACACTGTTTCACTGAGTACA+GGG | 0.561909 | tig0019465:-170955 | None:intergenic |
GCAGTTAATGAAGCAAGTTA+TGG | 0.562495 | tig0019465:+169813 | Msa1374180:CDS |
AGCTTTCTTTACATCAGGTG+TGG | 0.562529 | tig0019465:-172908 | None:intergenic |
CAGGATGATATAATGGTCAC+AGG | 0.563576 | tig0019465:+170821 | Msa1374180:CDS |
TAAAGCTGAACGCGCTGCTG+TGG | 0.563761 | tig0019465:+171600 | Msa1374180:CDS |
GGTGGGAAATCGTCGATGAT+GGG | 0.564317 | tig0019465:+170014 | Msa1374180:CDS |
TCCAGACAAACATAAGGAAG+AGG | 0.565417 | tig0019465:+169605 | Msa1374180:CDS |
GATTTCTGCGAGAAACATGC+AGG | 0.566233 | tig0019465:+170905 | Msa1374180:CDS |
TCAAAATCTTTCAGCTATGG+TGG | 0.566831 | tig0019465:+171772 | Msa1374180:CDS |
TCTCGAACTTCCAGAGCTCA+AGG | 0.566908 | tig0019465:+167604 | Msa1374180:CDS |
AATTCGTGAAGCTCGTGAAA+GGG | 0.566984 | tig0019465:+171426 | Msa1374180:CDS |
AAACAGTCTTTCAACAATGG+AGG | 0.567430 | tig0019465:+168967 | Msa1374180:CDS |
ATCCGTGACAAAGGAAGTGA+AGG | 0.567826 | tig0019465:+171294 | Msa1374180:CDS |
GCCAACCACTATCGGGCCCA+AGG | 0.567934 | tig0019465:-172858 | None:intergenic |
ATGTTAAAAGGTGGTCAAGT+GGG | 0.568578 | tig0019465:+172253 | Msa1374180:CDS |
CTTCTTTGTTAGTGTTGAGG+TGG | 0.569116 | tig0019465:-167435 | None:intergenic |
GCAAAAGTACACTTGTGAGA+AGG | 0.569795 | tig0019465:+172993 | Msa1374180:CDS |
TCCTTGGGCCCGATAGTGGT+TGG | 0.570322 | tig0019465:+172857 | Msa1374180:CDS |
TCCGGAGCTATTAGACAATG+AGG | 0.570468 | tig0019465:+170235 | Msa1374180:CDS |
TCATTCAGAATTAATAAGCA+TGG | 0.570815 | tig0019465:+170274 | Msa1374180:CDS |
CAAGAGCACGTGCCCTGGAG+AGG | 0.571595 | tig0019465:+171641 | Msa1374180:CDS |
TTCTGGTATTCATTGTGACG+AGG | 0.571760 | tig0019465:+168759 | Msa1374180:CDS |
AATATGTATGGATGCAAAGG+AGG | 0.571943 | tig0019465:+171144 | Msa1374180:CDS |
CTTATTAATTCTGAATGATG+AGG | 0.573496 | tig0019465:-170269 | None:intergenic |
AACTTCCAGAGCTCAAGGAA+AGG | 0.573960 | tig0019465:+167609 | Msa1374180:CDS |
AGTGACAGACAAGAGGTTGA+AGG | 0.574258 | tig0019465:+169920 | Msa1374180:CDS |
GTTGGTGCATCCAGAAGCAA+TGG | 0.578128 | tig0019465:+171730 | Msa1374180:CDS |
AAGTGTAAGCAGGGACAGCA+TGG | 0.578502 | tig0019465:-168663 | None:intergenic |
AGAGCTCAAGGAAAGGAGAA+TGG | 0.579068 | tig0019465:+167616 | Msa1374180:CDS |
AAGAAACAGTCTTTCAACAA+TGG | 0.581600 | tig0019465:+168964 | Msa1374180:CDS |
GTAAGCAGATCTTCCGGTGA+CGG | 0.582348 | tig0019465:-167474 | None:intergenic |
GAAGTGAAAATGGAACAAAT+GGG | 0.583313 | tig0019465:+168620 | Msa1374180:CDS |
CGATAAGCTGCAGCAGCGAG+GGG | 0.583635 | tig0019465:+172960 | Msa1374180:CDS |
TAATTCTTCAAAGGAAATCC+CGG | 0.584483 | tig0019465:+168534 | Msa1374180:CDS |
ACTCGTGCAGAAAGAGCAAG+AGG | 0.584590 | tig0019465:+172128 | Msa1374180:CDS |
TAGTATCAATTTGAAAGTCA+GGG | 0.586049 | tig0019465:+169368 | Msa1374180:CDS |
GAGAGAGGGCAGCTCTGGAG+AGG | 0.586072 | tig0019465:+171464 | Msa1374180:CDS |
AAAGGCTCTGTAATTAACCT+AGG | 0.588058 | tig0019465:+169993 | Msa1374180:CDS |
CTGAAAGAAGCAGATCATGA+AGG | 0.589550 | tig0019465:+169633 | Msa1374180:CDS |
TCAGATACCCTTCAAAGAAG+AGG | 0.590042 | tig0019465:+171228 | Msa1374180:CDS |
TCTGGTATTCATTGTGACGA+GGG | 0.590444 | tig0019465:+168760 | Msa1374180:CDS |
ATCGGGATGCACACAAAGAG+TGG | 0.590973 | tig0019465:-172941 | None:intergenic |
TGTGACGAGGGGATAAAAGA+AGG | 0.591437 | tig0019465:+168772 | Msa1374180:CDS |
CCGGAGCTATTAGACAATGA+GGG | 0.593751 | tig0019465:+170236 | Msa1374180:CDS |
TCATCAAACATCCGTGACAA+AGG | 0.593967 | tig0019465:+171285 | Msa1374180:CDS |
ATACATATTTCTATAGACTC+AGG | 0.594208 | tig0019465:-171130 | None:intergenic |
GGCACATATGAAAGTGCTGC+TGG | 0.595442 | tig0019465:+169174 | Msa1374180:CDS |
AACAGTCTACCAACAATGGA+GGG | 0.596418 | tig0019465:+168845 | Msa1374180:CDS |
TCGTCGAATTGAGAGAAGCT+TGG | 0.598506 | tig0019465:-167533 | None:intergenic |
AGAGAGGGCAGCTCTGGAGA+GGG | 0.599872 | tig0019465:+171465 | Msa1374180:CDS |
ATAGCTAGAACTGGATTCTG+AGG | 0.600865 | tig0019465:-170693 | None:intergenic |
TGGTAAGTCACAGAAGGTAG+AGG | 0.601388 | tig0019465:+171324 | Msa1374180:CDS |
ATAAAACATATCAACAGAGT+CGG | 0.601558 | tig0019465:-169007 | None:intergenic |
AAGAAACAGTCTACCAACAA+TGG | 0.604493 | tig0019465:+168841 | Msa1374180:CDS |
CATTGATACTTCGAGATCAA+CGG | 0.604620 | tig0019465:+169125 | Msa1374180:CDS |
AGCCAATGGTAAGTCACAGA+AGG | 0.605760 | tig0019465:+171318 | Msa1374180:CDS |
CAATTAAACAAGTGTAAGCA+GGG | 0.607398 | tig0019465:-168672 | None:intergenic |
AGCTCATGTTTGTATGAAGT+AGG | 0.607464 | tig0019465:+173492 | Msa1374180:three_prime_UTR |
GAACTCCATGACGACGGCGA+CGG | 0.607549 | tig0019465:-167405 | None:intergenic |
GTTTAGCAATATCAATGTCA+AGG | 0.609500 | tig0019465:+170415 | Msa1374180:CDS |
CGAAGCCTAAAGCATCGAAA+CGG | 0.609970 | tig0019465:+167732 | Msa1374180:CDS |
GTGATTTAAATGGAAATGTG+AGG | 0.611031 | tig0019465:+170507 | Msa1374180:CDS |
CTGGTATTCATTGTGACGAG+GGG | 0.611620 | tig0019465:+168761 | Msa1374180:CDS |
TCTGTTACAGGCTGTGAAGG+AGG | 0.611639 | tig0019465:-169081 | None:intergenic |
CATTTGCTGATGCAAGAGAG+AGG | 0.611807 | tig0019465:+171449 | Msa1374180:CDS |
TCTGGTCCAGAGAAGTATGT+TGG | 0.615382 | tig0019465:+171712 | Msa1374180:CDS |
CCTGATGGTCATGCACTCTG+TGG | 0.617182 | tig0019465:+173432 | Msa1374180:three_prime_UTR |
TGAAGACTTTCGAATAATCG+AGG | 0.618481 | tig0019465:-167661 | None:intergenic |
TAAAAGGTGGTCAAGTGGGA+AGG | 0.619386 | tig0019465:+172257 | Msa1374180:CDS |
GAGATAAGAGAAGAAGAACC+GGG | 0.624058 | tig0019465:+170665 | Msa1374180:CDS |
AAACAGTCTACCAACAATGG+AGG | 0.626548 | tig0019465:+168844 | Msa1374180:CDS |
TCTGAATGATGAGGACTGCA+CGG | 0.627361 | tig0019465:-170260 | None:intergenic |
ATTGCTAAACGTACTATCAG+TGG | 0.628136 | tig0019465:-170402 | None:intergenic |
GATTTATGAAAGAAATGCAA+AGG | 0.628939 | tig0019465:+170481 | Msa1374180:CDS |
TGTTGGTGAAACTGACATGA+AGG | 0.630531 | tig0019465:+171030 | Msa1374180:CDS |
TGAAGTTCGTGATTCTACTG+GGG | 0.631933 | tig0019465:+171903 | Msa1374180:intron |
ATCAGAAGAAACTTGCAGCA+AGG | 0.633986 | tig0019465:-169472 | None:intergenic |
AGATCACATGAATAAAACTC+TGG | 0.634048 | tig0019465:-170797 | None:intergenic |
AAATGCCAAGCATCTCAAAG+TGG | 0.637894 | tig0019465:+169153 | Msa1374180:CDS |
TAAGTCACAGAAGGTAGAGG+TGG | 0.639341 | tig0019465:+171327 | Msa1374180:CDS |
TTCTTGGGATGTAAATCAAG+AGG | 0.643015 | tig0019465:+170355 | Msa1374180:CDS |
TTTCATAAATCTCTTCATCG+TGG | 0.643783 | tig0019465:-170469 | None:intergenic |
ACCGGCTGAGAAGACTGCAA+TGG | 0.644940 | tig0019465:+171567 | Msa1374180:CDS |
GATGTTAAAAGGTGGTCAAG+TGG | 0.645928 | tig0019465:+172252 | Msa1374180:CDS |
ACAGTGGAGTGACAGACAAG+AGG | 0.647164 | tig0019465:+169913 | Msa1374180:CDS |
TTTAAGGAAGGCAATAGAAG+AGG | 0.648026 | tig0019465:+169266 | Msa1374180:CDS |
TGAATGAAGGTGATATCACC+GGG | 0.649170 | tig0019465:-168552 | None:intergenic |
ATTTGCTGATGCAAGAGAGA+GGG | 0.650221 | tig0019465:+171450 | Msa1374180:CDS |
TGTGTCAGATGAAGAGATCG+AGG | 0.651842 | tig0019465:+171174 | Msa1374180:CDS |
GGCAAATTTAGAAGGCCTGT+AGG | 0.651846 | tig0019465:+173513 | Msa1374180:three_prime_UTR |
TGAGAAGTTGAACAAAACAC+AGG | 0.652092 | tig0019465:+170730 | Msa1374180:CDS |
CACGGTTGACTCAAATTCAG+CGG | 0.655198 | tig0019465:+169224 | Msa1374180:CDS |
GATACCCTTCAAAGAAGAGG+AGG | 0.656350 | tig0019465:+171231 | Msa1374180:CDS |
CGGAGCTATTAGACAATGAG+GGG | 0.656874 | tig0019465:+170237 | Msa1374180:CDS |
TAGGGTGTGTGGCTCCCTCG+AGG | 0.657421 | tig0019465:-170559 | None:intergenic |
TGCTTGTGAAAATGACCTCG+AGG | 0.659552 | tig0019465:+170544 | Msa1374180:CDS |
TCAAGCAAATGAGAAAACAC+CGG | 0.660997 | tig0019465:+171549 | Msa1374180:CDS |
TCATCGACGATTTCCCACCT+AGG | 0.661183 | tig0019465:-170010 | None:intergenic |
AAGGAAGTGAAGGAAGCCAA+TGG | 0.661589 | tig0019465:+171304 | Msa1374180:CDS |
TGTGGAGAGAGCAACTGCAG+AGG | 0.665838 | tig0019465:+171618 | Msa1374180:CDS |
AGCATGGAACAGATTCAACA+TGG | 0.665975 | tig0019465:+173376 | Msa1374180:CDS |
GATTATTCGAAAGTCTTCAG+CGG | 0.668218 | tig0019465:+167665 | Msa1374180:CDS |
GCTTGTGAAAATGACCTCGA+GGG | 0.669828 | tig0019465:+170545 | Msa1374180:CDS |
GAGTGAAAGGAAAGACAACA+AGG | 0.671135 | tig0019465:+170595 | Msa1374180:CDS |
TCAGAGAATAGGAGAACGTG+TGG | 0.673831 | tig0019465:+171984 | Msa1374180:CDS |
TCATATCATAAAGTTAACCA+AGG | 0.677448 | tig0019465:+168598 | Msa1374180:CDS |
ATTCAGGCGACACTTGACAG+TGG | 0.679117 | tig0019465:+169897 | Msa1374180:CDS |
GAAAGTAAGATCAGATATCG+GGG | 0.680548 | tig0019465:+169521 | Msa1374180:CDS |
GATGTAAAGCTAGGTCCGAG+AGG | 0.681919 | tig0019465:+171959 | Msa1374180:CDS |
GATGCATGCGAGACTAGCAA+CGG | 0.682120 | tig0019465:+169030 | Msa1374180:CDS |
GACGAGGGGATAAAAGAAGG+TGG | 0.682852 | tig0019465:+168775 | Msa1374180:CDS |
ACCGTGTCTTCTAGGTACGT+CGG | 0.684457 | tig0019465:-169207 | None:intergenic |
AAGTTAACGAGATTAATACA+AGG | 0.686891 | tig0019465:+169427 | Msa1374180:CDS |
CAATGTCAAGGAAACACTGG+AGG | 0.687778 | tig0019465:+170427 | Msa1374180:CDS |
CACTGTTTCACTGAGTACAG+GGG | 0.697126 | tig0019465:-170954 | None:intergenic |
TCGATGCCGATGTTAAAAGG+TGG | 0.697898 | tig0019465:+172244 | Msa1374180:CDS |
ACCGGAAGATCTGCTTACGA+CGG | 0.704223 | tig0019465:+167479 | Msa1374180:CDS |
GGCTCTGAACTCCATGACGA+CGG | 0.704268 | tig0019465:-167411 | None:intergenic |
ACCGACGTACCTAGAAGACA+CGG | 0.718058 | tig0019465:+169206 | Msa1374180:CDS |
TCAATTCGACGATTACAACG+AGG | 0.771806 | tig0019465:+167544 | Msa1374180:CDS |
TGAAAGGAAAGACAACAAGG+TGG | 0.803777 | tig0019465:+170598 | Msa1374180:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGAAACAAAAAAAAAAA+AGG | - | tig0019465:167994-168013 | None:intergenic | 10.0% |
!! | AAAAAAAGAAAAAAAAAAGA+AGG | - | tig0019465:171838-171857 | None:intergenic | 10.0% |
!! | AGATAATAATACTACAAAAT+TGG | - | tig0019465:168116-168135 | None:intergenic | 15.0% |
!! | AATTATTCCTTGATTAATAA+AGG | - | tig0019465:173632-173651 | None:intergenic | 15.0% |
!!! | TAATCGTTCTTTGTATTTTA+GGG | + | tig0019465:167774-167793 | Msa1374180:intron | 20.0% |
!!! | TTTTGTAGTATTATTATCTG+AGG | + | tig0019465:168117-168136 | Msa1374180:intron | 20.0% |
!! | TTTGTAGTATTATTATCTGA+GGG | + | tig0019465:168118-168137 | Msa1374180:intron | 20.0% |
!!! | AAAAAATTTTGAGCTTAAAG+AGG | + | tig0019465:169656-169675 | Msa1374180:CDS | 20.0% |
!!! | TACCAGTGTTTTTAATATAA+GGG | - | tig0019465:169701-169720 | None:intergenic | 20.0% |
!! | AAAAATAAATATGACAAGTC+TGG | + | tig0019465:171694-171713 | Msa1374180:CDS | 20.0% |
!! | TCAAGAAATAACAATCTAAA+AGG | - | tig0019465:172381-172400 | None:intergenic | 20.0% |
!!! | ATTTTCATGTTGTTTAATGA+TGG | - | tig0019465:173051-173070 | None:intergenic | 20.0% |
!! | TCATTAAACAACATGAAAAT+TGG | + | tig0019465:173051-173070 | Msa1374180:intron | 20.0% |
!!! | TGATAAATGTTTTCCATTTT+TGG | - | tig0019465:173111-173130 | None:intergenic | 20.0% |
!!! | TTTTTCTCTCTAAACTTAAA+CGG | + | tig0019465:173199-173218 | Msa1374180:intron | 20.0% |
!!! | TTATTTTAATTGATGTCTTC+AGG | + | tig0019465:173352-173371 | Msa1374180:intron | 20.0% |
!!! | CTTTTTTTTTGGAAAAAATG+TGG | - | tig0019465:173588-173607 | None:intergenic | 20.0% |
!!! | ATAGACAACAACTTTTTTTT+TGG | - | tig0019465:173599-173618 | None:intergenic | 20.0% |
!! | AAATAAGCCTTTATTAATCA+AGG | + | tig0019465:173622-173641 | Msa1374180:three_prime_UTR | 20.0% |
!! | GTAATCGTTCTTTGTATTTT+AGG | + | tig0019465:167773-167792 | Msa1374180:intron | 25.0% |
! | TCTTATTAACATGTCATAAG+CGG | - | tig0019465:168220-168239 | None:intergenic | 25.0% |
!! | ATATGACATATTGATCGTTT+TGG | - | tig0019465:168584-168603 | None:intergenic | 25.0% |
! | TCATATCATAAAGTTAACCA+AGG | + | tig0019465:168598-168617 | Msa1374180:CDS | 25.0% |
!! | GATATGTTTTATGATGAAGA+AGG | + | tig0019465:168895-168914 | Msa1374180:CDS | 25.0% |
! | ATAAAACATATCAACAGAGT+CGG | - | tig0019465:168887-168906 | None:intergenic | 25.0% |
! | TTATCCAAATTATCTGTTAC+AGG | - | tig0019465:169096-169115 | None:intergenic | 25.0% |
! | TAGTATCAATTTGAAAGTCA+GGG | + | tig0019465:169368-169387 | Msa1374180:CDS | 25.0% |
! | AAGTTAACGAGATTAATACA+AGG | + | tig0019465:169427-169446 | Msa1374180:CDS | 25.0% |
! | ATTAATACAAGGCAAACATT+TGG | + | tig0019465:169438-169457 | Msa1374180:CDS | 25.0% |
!!! | CTACCAGTGTTTTTAATATA+AGG | - | tig0019465:169702-169721 | None:intergenic | 25.0% |
! | CTTATATTAAAAACACTGGT+AGG | + | tig0019465:169700-169719 | Msa1374180:CDS | 25.0% |
! | ATCTGATCATACAATTGAAA+TGG | + | tig0019465:169746-169765 | Msa1374180:CDS | 25.0% |
! | TCATACAATTGAAATGGTTA+AGG | + | tig0019465:169752-169771 | Msa1374180:CDS | 25.0% |
! | TTGAAATGGTTAAGGAATAT+TGG | + | tig0019465:169760-169779 | Msa1374180:CDS | 25.0% |
! | TGAAATGGTTAAGGAATATT+GGG | + | tig0019465:169761-169780 | Msa1374180:CDS | 25.0% |
!! | ATGGGAAAGAAAAAAAGTAT+TGG | + | tig0019465:170032-170051 | Msa1374180:CDS | 25.0% |
! | AAGATGGTAAAAAGACTAAA+TGG | + | tig0019465:170066-170085 | Msa1374180:CDS | 25.0% |
!!! | GAATAGCTCTCAATATTTTT+TGG | - | tig0019465:170112-170131 | None:intergenic | 25.0% |
! | AAAAATATTGAGAGCTATTC+AGG | + | tig0019465:170112-170131 | Msa1374180:CDS | 25.0% |
! | CTTATTAATTCTGAATGATG+AGG | - | tig0019465:170272-170291 | None:intergenic | 25.0% |
! | TCATTCAGAATTAATAAGCA+TGG | + | tig0019465:170274-170293 | Msa1374180:CDS | 25.0% |
! | GATTTATGAAAGAAATGCAA+AGG | + | tig0019465:170481-170500 | Msa1374180:CDS | 25.0% |
! | TCAAACTGATCTAATTTATG+AGG | + | tig0019465:170643-170662 | Msa1374180:CDS | 25.0% |
!! | ATACATATTTCTATAGACTC+AGG | - | tig0019465:171133-171152 | None:intergenic | 25.0% |
! | TGAGTCTATAGAAATATGTA+TGG | + | tig0019465:171132-171151 | Msa1374180:CDS | 25.0% |
! | AAAGAATAGAGAAAGAGAAA+AGG | + | tig0019465:171381-171400 | Msa1374180:CDS | 25.0% |
!! | GTCAAAAGAACATTTTGAAT+GGG | + | tig0019465:171503-171522 | Msa1374180:CDS | 25.0% |
! | CCAATATGTACAAAAAACAT+GGG | - | tig0019465:172027-172046 | None:intergenic | 25.0% |
! | ACCAATATGTACAAAAAACA+TGG | - | tig0019465:172028-172047 | None:intergenic | 25.0% |
! | GAATATTGTGTTAGACAAAA+TGG | - | tig0019465:172198-172217 | None:intergenic | 25.0% |
! | ATCAGAGGTTATATTCTAAA+AGG | - | tig0019465:172348-172367 | None:intergenic | 25.0% |
! | AGAAATAACAATCTAAAAGG+AGG | - | tig0019465:172378-172397 | None:intergenic | 25.0% |
! | TTGATATATTGCATATGAAC+TGG | + | tig0019465:172397-172416 | Msa1374180:intron | 25.0% |
! | AACAATAAAGGAAAAATCCA+TGG | - | tig0019465:172423-172442 | None:intergenic | 25.0% |
! | GAAAGCTTCATTAACAATAA+AGG | - | tig0019465:172435-172454 | None:intergenic | 25.0% |
! | AAGGTAGTAGTATAAAGTAA+AGG | - | tig0019465:172756-172775 | None:intergenic | 25.0% |
! | TGCTATTGACAAAACTAAAA+AGG | - | tig0019465:172780-172799 | None:intergenic | 25.0% |
!! | TTGGTAGATCTATTTTACTT+GGG | + | tig0019465:172804-172823 | Msa1374180:intron | 25.0% |
!! | TTTTCTCTCTAAACTTAAAC+GGG | + | tig0019465:173200-173219 | Msa1374180:intron | 25.0% |
! | GGGTTAATATATGTTGTATT+CGG | + | tig0019465:173220-173239 | Msa1374180:intron | 25.0% |
! | GGTTAATATATGTTGTATTC+GGG | + | tig0019465:173221-173240 | Msa1374180:intron | 25.0% |
!!! | GGGTTTTGTTCATTTTATTG+TGG | + | tig0019465:167794-167813 | Msa1374180:intron | 30.0% |
!! | TGTTGTCTTTTCTGATTTGT+CGG | + | tig0019465:167886-167905 | Msa1374180:intron | 30.0% |
TTAAGCAAAAGCTCTTCAAA+AGG | + | tig0019465:168070-168089 | Msa1374180:intron | 30.0% | |
TAAGCAAAAGCTCTTCAAAA+GGG | + | tig0019465:168071-168090 | Msa1374180:intron | 30.0% | |
! | TAATTTGCAGCTTATAGCAT+AGG | - | tig0019465:168385-168404 | None:intergenic | 30.0% |
AGATCGTGTTAATTCTTCAA+AGG | + | tig0019465:168525-168544 | Msa1374180:CDS | 30.0% | |
TAATTCTTCAAAGGAAATCC+CGG | + | tig0019465:168534-168553 | Msa1374180:CDS | 30.0% | |
GAAGTGAAAATGGAACAAAT+GGG | + | tig0019465:168620-168639 | Msa1374180:CDS | 30.0% | |
CAATTAAACAAGTGTAAGCA+GGG | - | tig0019465:168675-168694 | None:intergenic | 30.0% | |
TCAATTAAACAAGTGTAAGC+AGG | - | tig0019465:168676-168695 | None:intergenic | 30.0% | |
! | ATGTTTTATGATGAAGAAGG+TGG | + | tig0019465:168898-168917 | Msa1374180:CDS | 30.0% |
! | GACTGTTTCTTGACATTATT+AGG | - | tig0019465:168832-168851 | None:intergenic | 30.0% |
AAGAAACAGTCTTTCAACAA+TGG | + | tig0019465:168964-168983 | Msa1374180:CDS | 30.0% | |
AGAGGCTCAAATGAAAATAA+AGG | + | tig0019465:169284-169303 | Msa1374180:CDS | 30.0% | |
TCAATGAGAAGAAAGAAAGA+AGG | + | tig0019465:169318-169337 | Msa1374180:CDS | 30.0% | |
CTAGTATCAATTTGAAAGTC+AGG | + | tig0019465:169367-169386 | Msa1374180:CDS | 30.0% | |
TTTGAAAGTCAGGGAAAAAA+AGG | + | tig0019465:169377-169396 | Msa1374180:CDS | 30.0% | |
GAGAAAGTAAGATCAGATAT+CGG | + | tig0019465:169519-169538 | Msa1374180:CDS | 30.0% | |
AGAAAGTAAGATCAGATATC+GGG | + | tig0019465:169520-169539 | Msa1374180:CDS | 30.0% | |
! | GGAGACAATTTCAATTTGTT+CGG | - | tig0019465:169588-169607 | None:intergenic | 30.0% |
GACCCTTATATTAAAAACAC+TGG | + | tig0019465:169696-169715 | Msa1374180:CDS | 30.0% | |
ATTGTATGATCAGATTCTTC+AGG | - | tig0019465:169741-169760 | None:intergenic | 30.0% | |
!! | GACACTTTTGTTTAGTTTCA+TGG | - | tig0019465:169851-169870 | None:intergenic | 30.0% |
!! | TTAGTCTTTTTACCATCTTC+TGG | - | tig0019465:170065-170084 | None:intergenic | 30.0% |
AAGTGAGAATAAAGTTGAAG+TGG | + | tig0019465:170178-170197 | Msa1374180:CDS | 30.0% | |
GTTTAGAAGACAAAAAGAGA+AGG | + | tig0019465:170321-170340 | Msa1374180:CDS | 30.0% | |
GTTTAGCAATATCAATGTCA+AGG | + | tig0019465:170415-170434 | Msa1374180:CDS | 30.0% | |
TTTCATAAATCTCTTCATCG+TGG | - | tig0019465:170472-170491 | None:intergenic | 30.0% | |
GTGATTTAAATGGAAATGTG+AGG | + | tig0019465:170507-170526 | Msa1374180:CDS | 30.0% | |
AGATCACATGAATAAAACTC+TGG | - | tig0019465:170800-170819 | None:intergenic | 30.0% | |
TTAGTAACTTGAACAGATTC+TGG | - | tig0019465:170884-170903 | None:intergenic | 30.0% | |
ATTTGTGGAATCATTGTCAA+TGG | - | tig0019465:171011-171030 | None:intergenic | 30.0% | |
AGAAATATGTATGGATGCAA+AGG | + | tig0019465:171141-171160 | Msa1374180:CDS | 30.0% | |
ATCAATTCCCAGCAAAATAA+AGG | + | tig0019465:171258-171277 | Msa1374180:CDS | 30.0% | |
! | CGTCAAAAGAACATTTTGAA+TGG | + | tig0019465:171502-171521 | Msa1374180:CDS | 30.0% |
! | CATAGCTGAAAGATTTTGAA+TGG | - | tig0019465:171771-171790 | None:intergenic | 30.0% |
CATTCAAAATCTTTCAGCTA+TGG | + | tig0019465:171769-171788 | Msa1374180:CDS | 30.0% | |
!!! | CCCATGTTTTTTGTACATAT+TGG | + | tig0019465:172024-172043 | Msa1374180:intron | 30.0% |
! | AGAGGTTATATTCTAAAAGG+AGG | - | tig0019465:172345-172364 | None:intergenic | 30.0% |
TCATTAAATACGCCAAATAC+TGG | + | tig0019465:172707-172726 | Msa1374180:intron | 30.0% | |
CATTAAATACGCCAAATACT+GGG | + | tig0019465:172708-172727 | Msa1374180:intron | 30.0% | |
! | TTTAAAGCAAACCCAGTATT+TGG | - | tig0019465:172722-172741 | None:intergenic | 30.0% |
TTGACAAAACTAAAAAGGCA+AGG | - | tig0019465:172775-172794 | None:intergenic | 30.0% | |
! | GTTTTGTCAATAGCATTTCT+TGG | + | tig0019465:172785-172804 | Msa1374180:intron | 30.0% |
! | CTTGGTAGATCTATTTTACT+TGG | + | tig0019465:172803-172822 | Msa1374180:intron | 30.0% |
! | ACTATTGCTGTTAAAGGAAT+TGG | - | tig0019465:172886-172905 | None:intergenic | 30.0% |
! | GAAGGTTTTTGATCTTCTAA+AGG | + | tig0019465:173011-173030 | Msa1374180:CDS | 30.0% |
! | TTTGATCTTCTAAAGGTTTG+TGG | + | tig0019465:173018-173037 | Msa1374180:intron | 30.0% |
!! | TTCCATTTTTGGAGAAAGAA+CGG | - | tig0019465:173100-173119 | None:intergenic | 30.0% |
ATCAATAGCATAACTCGTTA+AGG | - | tig0019465:173140-173159 | None:intergenic | 30.0% | |
AATTTCAACCTCAATCACAA+TGG | + | tig0019465:173165-173184 | Msa1374180:intron | 30.0% | |
ATATATGTTGTATTCGGGAT+TGG | + | tig0019465:173226-173245 | Msa1374180:intron | 30.0% | |
TATATGTTGTATTCGGGATT+GGG | + | tig0019465:173227-173246 | Msa1374180:intron | 30.0% | |
! | AAAGGTCACTTTCAAACATA+AGG | - | tig0019465:173275-173294 | None:intergenic | 30.0% |
!! | AGTGACCTTTTGAAAAATAC+AGG | + | tig0019465:173285-173304 | Msa1374180:intron | 30.0% |
!! | GTGACCTTTTGAAAAATACA+GGG | + | tig0019465:173286-173305 | Msa1374180:intron | 30.0% |
!! | CTTACCCTGTATTTTTCAAA+AGG | - | tig0019465:173293-173312 | None:intergenic | 30.0% |
!! | TGAGCTTACTTTTCATTGAA+CGG | - | tig0019465:173478-173497 | None:intergenic | 30.0% |
ATGAAGTAGGCAAATTTAGA+AGG | + | tig0019465:173505-173524 | Msa1374180:three_prime_UTR | 30.0% | |
! | AATTGATTGTTTTCACCTAC+AGG | - | tig0019465:173531-173550 | None:intergenic | 30.0% |
! | AGTGAAAGAGACTTTTCCAA+CGG | - | tig0019465:167249-167268 | None:intergenic | 35.0% |
TGAAGACTTTCGAATAATCG+AGG | - | tig0019465:167664-167683 | None:intergenic | 35.0% | |
GATTATTCGAAAGTCTTCAG+CGG | + | tig0019465:167665-167684 | Msa1374180:CDS | 35.0% | |
TCGTTTATTTGCATGTGTGT+TGG | + | tig0019465:167825-167844 | Msa1374180:intron | 35.0% | |
AAAGTGTGCAATTATAGCAG+TGG | - | tig0019465:168040-168059 | None:intergenic | 35.0% | |
AAGCAAAAGCTCTTCAAAAG+GGG | + | tig0019465:168072-168091 | Msa1374180:intron | 35.0% | |
TTATTATCTGAGGGTCAGTT+TGG | + | tig0019465:168127-168146 | Msa1374180:intron | 35.0% | |
! | CACTTGTTAAAGAGTTTGAG+AGG | + | tig0019465:168183-168202 | Msa1374180:intron | 35.0% |
!! | GCTGTTTTCATAAGCTATCT+TGG | - | tig0019465:168270-168289 | None:intergenic | 35.0% |
TCTAAGCATCTCACAAGTTA+TGG | - | tig0019465:168421-168440 | None:intergenic | 35.0% | |
TGAGATGCTTAGAATACAGA+CGG | + | tig0019465:168428-168447 | Msa1374180:intron | 35.0% | |
CCTATAGAATAACACATGTC+AGG | - | tig0019465:168470-168489 | None:intergenic | 35.0% | |
! | CCTGACATGTGTTATTCTAT+AGG | + | tig0019465:168467-168486 | Msa1374180:intron | 35.0% |
TATAGGAGCAAAGTCAAAAG+TGG | + | tig0019465:168484-168503 | Msa1374180:intron | 35.0% | |
TTGAATGAAGGTGATATCAC+CGG | - | tig0019465:168556-168575 | None:intergenic | 35.0% | |
GTGATATCACCTTCATTCAA+TGG | + | tig0019465:168556-168575 | Msa1374180:CDS | 35.0% | |
GTTAACCAAGGAAGTGAAAA+TGG | + | tig0019465:168610-168629 | Msa1374180:CDS | 35.0% | |
! | TTGTTCCATTTTCACTTCCT+TGG | - | tig0019465:168618-168637 | None:intergenic | 35.0% |
GGAAGTGAAAATGGAACAAA+TGG | + | tig0019465:168619-168638 | Msa1374180:CDS | 35.0% | |
AAGAAACAGTCTACCAACAA+TGG | + | tig0019465:168841-168860 | Msa1374180:CDS | 35.0% | |
TGACATTATTAGGTGAAGCA+TGG | - | tig0019465:168945-168964 | None:intergenic | 35.0% | |
AAACAGTCTTTCAACAATGG+AGG | + | tig0019465:168967-168986 | Msa1374180:CDS | 35.0% | |
AACAGTCTTTCAACAATGGA+GGG | + | tig0019465:168968-168987 | Msa1374180:CDS | 35.0% | |
ACAGCCTGTAACAGATAATT+TGG | + | tig0019465:169089-169108 | Msa1374180:CDS | 35.0% | |
CATTGATACTTCGAGATCAA+CGG | + | tig0019465:169125-169144 | Msa1374180:CDS | 35.0% | |
TTTAAGGAAGGCAATAGAAG+AGG | + | tig0019465:169266-169285 | Msa1374180:CDS | 35.0% | |
AAGGCAAACATTTGGAGAAA+TGG | + | tig0019465:169446-169465 | Msa1374180:CDS | 35.0% | |
CTTACTTTCTCTGTTCTCAT+TGG | - | tig0019465:169510-169529 | None:intergenic | 35.0% | |
GAAAGTAAGATCAGATATCG+GGG | + | tig0019465:169521-169540 | Msa1374180:CDS | 35.0% | |
ATTGTCTCCAGACAAACATA+AGG | + | tig0019465:169599-169618 | Msa1374180:CDS | 35.0% | |
! | AATTTTGAGCTTAAAGAGGC+AGG | + | tig0019465:169660-169679 | Msa1374180:CDS | 35.0% |
!! | AGATTCTTCAGGTTTTTCAG+TGG | - | tig0019465:169730-169749 | None:intergenic | 35.0% |
GCAGTTAATGAAGCAAGTTA+TGG | + | tig0019465:169813-169832 | Msa1374180:CDS | 35.0% | |
AGTTGAAGAAGTTGAGAACA+AGG | + | tig0019465:169950-169969 | Msa1374180:CDS | 35.0% | |
ACACCGTTTAATGAACCAAA+AGG | + | tig0019465:169975-169994 | Msa1374180:CDS | 35.0% | |
!!! | GAGCCTTTTGGTTCATTAAA+CGG | - | tig0019465:169981-170000 | None:intergenic | 35.0% |
! | AGGTTAATTACAGAGCCTTT+TGG | - | tig0019465:169993-170012 | None:intergenic | 35.0% |
AAAGGCTCTGTAATTAACCT+AGG | + | tig0019465:169993-170012 | Msa1374180:CDS | 35.0% | |
AAAAAGAGAAGGAATGCATC+TGG | + | tig0019465:170332-170351 | Msa1374180:CDS | 35.0% | |
TTCTTGGGATGTAAATCAAG+AGG | + | tig0019465:170355-170374 | Msa1374180:CDS | 35.0% | |
AAGAGGTAGAACATTCCTAT+TGG | + | tig0019465:170372-170391 | Msa1374180:CDS | 35.0% | |
ATTGCTAAACGTACTATCAG+TGG | - | tig0019465:170405-170424 | None:intergenic | 35.0% | |
TATCAATGTCAAGGAAACAC+TGG | + | tig0019465:170424-170443 | Msa1374180:CDS | 35.0% | |
GCAAAGGCTAGTGATTTAAA+TGG | + | tig0019465:170497-170516 | Msa1374180:CDS | 35.0% | |
TTCAACTTCTCAGTTTCATC+TGG | - | tig0019465:170722-170741 | None:intergenic | 35.0% | |
TGAGAAGTTGAACAAAACAC+AGG | + | tig0019465:170730-170749 | Msa1374180:CDS | 35.0% | |
!! | GTTTTATTCATGTGATCTGC+AGG | + | tig0019465:170802-170821 | Msa1374180:CDS | 35.0% |
TGATCTGCAGGATGATATAA+TGG | + | tig0019465:170814-170833 | Msa1374180:CDS | 35.0% | |
GACAATGATTCCACAAATGT+TGG | + | tig0019465:171013-171032 | Msa1374180:CDS | 35.0% | |
AATATGTATGGATGCAAAGG+AGG | + | tig0019465:171144-171163 | Msa1374180:CDS | 35.0% | |
!!! | TGACTCTCCTTTATTTTGCT+GGG | - | tig0019465:171268-171287 | None:intergenic | 35.0% |
!!! | ATGACTCTCCTTTATTTTGC+TGG | - | tig0019465:171269-171288 | None:intergenic | 35.0% |
TTTCTCATTTGCTTGACAAG+TGG | - | tig0019465:171545-171564 | None:intergenic | 35.0% | |
TCAAGCAAATGAGAAAACAC+CGG | + | tig0019465:171549-171568 | Msa1374180:CDS | 35.0% | |
AGCAATGGAACAAAGCAAAA+CGG | + | tig0019465:171745-171764 | Msa1374180:CDS | 35.0% | |
TCAAAATCTTTCAGCTATGG+TGG | + | tig0019465:171772-171791 | Msa1374180:CDS | 35.0% | |
AGTTCCACTTTACCTGATAT+CGG | + | tig0019465:171810-171829 | Msa1374180:intron | 35.0% | |
!! | AAAAAGAAGGTACCGATATC+AGG | - | tig0019465:171825-171844 | None:intergenic | 35.0% |
CAAAAAACATGGGCAAAACA+AGG | - | tig0019465:172017-172036 | None:intergenic | 35.0% | |
TAACGTAGAACAGTGATTGT+TGG | - | tig0019465:172068-172087 | None:intergenic | 35.0% | |
! | ACTTGACCACCTTTTAACAT+CGG | - | tig0019465:172253-172272 | None:intergenic | 35.0% |
ATGTTAAAAGGTGGTCAAGT+GGG | + | tig0019465:172253-172272 | Msa1374180:CDS | 35.0% | |
! | AAAGGAGGTATATTCATCAG+AGG | - | tig0019465:172363-172382 | None:intergenic | 35.0% |
AAGCTTTCCTTGTAAACTTC+AGG | + | tig0019465:172447-172466 | Msa1374180:intron | 35.0% | |
AGCTTTCCTTGTAAACTTCA+GGG | + | tig0019465:172448-172467 | Msa1374180:intron | 35.0% | |
TATCTGTGGAGTCTATAACT+TGG | + | tig0019465:172547-172566 | Msa1374180:intron | 35.0% | |
AGTCTATAACTTGGCTGATA+TGG | + | tig0019465:172556-172575 | Msa1374180:intron | 35.0% | |
! | GTGGTTACTATTGCTGTTAA+AGG | - | tig0019465:172892-172911 | None:intergenic | 35.0% |
TAAGAGAACCATTGTGATTG+AGG | - | tig0019465:173176-173195 | None:intergenic | 35.0% | |
TGGGATCAATTTGACTAACA+TGG | + | tig0019465:173246-173265 | Msa1374180:intron | 35.0% | |
ACAGATTCAACATGGAAGAA+AGG | + | tig0019465:173384-173403 | Msa1374180:CDS | 35.0% | |
ATGTTAATTGTGCTTCCTGA+TGG | + | tig0019465:173417-173436 | Msa1374180:three_prime_UTR | 35.0% | |
AGCTCATGTTTGTATGAAGT+AGG | + | tig0019465:173492-173511 | Msa1374180:three_prime_UTR | 35.0% | |
!!! | TTTTTTCCCTCTCATTCCGT+TGG | + | tig0019465:167230-167249 | Msa1374180:five_prime_UTR | 40.0% |
! | ACTTTTCCAACGGAATGAGA+GGG | - | tig0019465:167239-167258 | None:intergenic | 40.0% |
! | CTTCTTTGTTAGTGTTGAGG+TGG | - | tig0019465:167438-167457 | None:intergenic | 40.0% |
GTGCTTCTTTGTTAGTGTTG+AGG | - | tig0019465:167441-167460 | None:intergenic | 40.0% | |
! | CTTGGAGTTCTTAGCTTGAT+TGG | - | tig0019465:167518-167537 | None:intergenic | 40.0% |
TCAATTCGACGATTACAACG+AGG | + | tig0019465:167544-167563 | Msa1374180:CDS | 40.0% | |
! | GACGATTACAACGAGGTTTT+CGG | + | tig0019465:167551-167570 | Msa1374180:CDS | 40.0% |
TTCGGAATCAGTTCCTCAAA+AGG | - | tig0019465:167716-167735 | None:intergenic | 40.0% | |
AGCAAAAGCTCTTCAAAAGG+GGG | + | tig0019465:168073-168092 | Msa1374180:intron | 40.0% | |
AATACAGACGGTGACCTTAA+TGG | + | tig0019465:168440-168459 | Msa1374180:intron | 40.0% | |
ACATGTCAGGAACACCATTA+AGG | - | tig0019465:168457-168476 | None:intergenic | 40.0% | |
TGAATGAAGGTGATATCACC+GGG | - | tig0019465:168555-168574 | None:intergenic | 40.0% | |
!!! | GTTTTGGCTCCATTGAATGA+AGG | - | tig0019465:168568-168587 | None:intergenic | 40.0% |
TAAAGACGAGCAGAGCTAAA+TGG | + | tig0019465:168710-168729 | Msa1374180:CDS | 40.0% | |
TTCTGGTATTCATTGTGACG+AGG | + | tig0019465:168759-168778 | Msa1374180:CDS | 40.0% | |
TCTGGTATTCATTGTGACGA+GGG | + | tig0019465:168760-168779 | Msa1374180:CDS | 40.0% | |
AAACAGTCTACCAACAATGG+AGG | + | tig0019465:168844-168863 | Msa1374180:CDS | 40.0% | |
AACAGTCTACCAACAATGGA+GGG | + | tig0019465:168845-168864 | Msa1374180:CDS | 40.0% | |
TATAGCTTTCCCTCCATTGT+TGG | - | tig0019465:168857-168876 | None:intergenic | 40.0% | |
TTATCTGTTACAGGCTGTGA+AGG | - | tig0019465:169087-169106 | None:intergenic | 40.0% | |
!! | ACTTTGAGATGCTTGGCATT+TGG | - | tig0019465:169154-169173 | None:intergenic | 40.0% |
AAATGCCAAGCATCTCAAAG+TGG | + | tig0019465:169153-169172 | Msa1374180:CDS | 40.0% | |
!! | TTCTGTAGCTGCTTTAAGGA+AGG | + | tig0019465:169254-169273 | Msa1374180:CDS | 40.0% |
GACTTCTGTTTGACATGATC+AGG | - | tig0019465:169348-169367 | None:intergenic | 40.0% | |
ATCAGAAGAAACTTGCAGCA+AGG | - | tig0019465:169475-169494 | None:intergenic | 40.0% | |
CTGCAAGTTTCTTCTGATGT+AGG | + | tig0019465:169477-169496 | Msa1374180:CDS | 40.0% | |
!! | TTTGTTCGGTGCTTCTTGTA+CGG | - | tig0019465:169574-169593 | None:intergenic | 40.0% |
TCCAGACAAACATAAGGAAG+AGG | + | tig0019465:169605-169624 | Msa1374180:CDS | 40.0% | |
ACCTCTTCCTTATGTTTGTC+TGG | - | tig0019465:169609-169628 | None:intergenic | 40.0% | |
CTGAAAGAAGCAGATCATGA+AGG | + | tig0019465:169633-169652 | Msa1374180:CDS | 40.0% | |
!! | CAAAAGTGTCAAGAAGTTGC+TGG | + | tig0019465:169861-169880 | Msa1374180:CDS | 40.0% |
TGGTGAAACAAACCTGATTC+AGG | + | tig0019465:169881-169900 | Msa1374180:CDS | 40.0% | |
GCTCTGTAATTAACCTAGGT+GGG | + | tig0019465:169997-170016 | Msa1374180:CDS | 40.0% | |
ATTGGCTATAAGCCAGAAGA+TGG | + | tig0019465:170050-170069 | Msa1374180:CDS | 40.0% | |
GACTAAATGGTCCATTGATC+AGG | + | tig0019465:170079-170098 | Msa1374180:CDS | 40.0% | |
TTGGCATTCTTCCTGATCAA+TGG | - | tig0019465:170093-170112 | None:intergenic | 40.0% | |
TTGAGAGCTATTCAGGAACT+TGG | + | tig0019465:170119-170138 | Msa1374180:CDS | 40.0% | |
GCTATTCAGGAACTTGGAAA+TGG | + | tig0019465:170125-170144 | Msa1374180:CDS | 40.0% | |
ATGTGAATTGACAGAGTCTC+CGG | + | tig0019465:170217-170236 | Msa1374180:CDS | 40.0% | |
!! | AAGGAATGCATCTGGTTCTT+GGG | + | tig0019465:170340-170359 | Msa1374180:CDS | 40.0% |
TCTCTTCATCGTGGTGAATA+TGG | - | tig0019465:170463-170482 | None:intergenic | 40.0% | |
!! | GAGGTCATTTTCACAAGCAT+GGG | - | tig0019465:170543-170562 | None:intergenic | 40.0% |
! | ATTTTCTTCCATAGGGTGTG+TGG | - | tig0019465:170573-170592 | None:intergenic | 40.0% |
! | CACTCGCATTTTCTTCCATA+GGG | - | tig0019465:170580-170599 | None:intergenic | 40.0% |
! | TCACTCGCATTTTCTTCCAT+AGG | - | tig0019465:170581-170600 | None:intergenic | 40.0% |
TGGAAGAAAATGCGAGTGAA+AGG | + | tig0019465:170582-170601 | Msa1374180:CDS | 40.0% | |
GAGTGAAAGGAAAGACAACA+AGG | + | tig0019465:170595-170614 | Msa1374180:CDS | 40.0% | |
TGAAAGGAAAGACAACAAGG+TGG | + | tig0019465:170598-170617 | Msa1374180:CDS | 40.0% | |
GGAGATAAGAGAAGAAGAAC+CGG | + | tig0019465:170664-170683 | Msa1374180:CDS | 40.0% | |
GAGATAAGAGAAGAAGAACC+GGG | + | tig0019465:170665-170684 | Msa1374180:CDS | 40.0% | |
ATAGCTAGAACTGGATTCTG+AGG | - | tig0019465:170696-170715 | None:intergenic | 40.0% | |
! | ATCTGGTTCATAGCTAGAAC+TGG | - | tig0019465:170705-170724 | None:intergenic | 40.0% |
CAGGATGATATAATGGTCAC+AGG | + | tig0019465:170821-170840 | Msa1374180:CDS | 40.0% | |
CTTCATCAAAGTCAGAAGTC+TGG | - | tig0019465:170931-170950 | None:intergenic | 40.0% | |
CAGACTTCTGACTTTGATGA+AGG | + | tig0019465:170929-170948 | Msa1374180:CDS | 40.0% | |
ACACTGTTTCACTGAGTACA+GGG | - | tig0019465:170958-170977 | None:intergenic | 40.0% | |
TACACTGTTTCACTGAGTAC+AGG | - | tig0019465:170959-170978 | None:intergenic | 40.0% | |
GTCAGTTTCACCAACATTTG+TGG | - | tig0019465:171026-171045 | None:intergenic | 40.0% | |
! | TGTTGGTGAAACTGACATGA+AGG | + | tig0019465:171030-171049 | Msa1374180:CDS | 40.0% |
GTGAAACTGACATGAAGGTT+AGG | + | tig0019465:171035-171054 | Msa1374180:CDS | 40.0% | |
GCAAAACCAAGATCAGTGTT+TGG | + | tig0019465:171057-171076 | Msa1374180:CDS | 40.0% | |
! | CCTTTTCCAAACACTGATCT+TGG | - | tig0019465:171066-171085 | None:intergenic | 40.0% |
CCAAGATCAGTGTTTGGAAA+AGG | + | tig0019465:171063-171082 | Msa1374180:CDS | 40.0% | |
TTCACCTCCTCTTCTTTGAA+GGG | - | tig0019465:171238-171257 | None:intergenic | 40.0% | |
TTTCACCTCCTCTTCTTTGA+AGG | - | tig0019465:171239-171258 | None:intergenic | 40.0% | |
TCATCAAACATCCGTGACAA+AGG | + | tig0019465:171285-171304 | Msa1374180:CDS | 40.0% | |
TTCCTTCACTTCCTTTGTCA+CGG | - | tig0019465:171299-171318 | None:intergenic | 40.0% | |
TACCTTCTGTGACTTACCAT+TGG | - | tig0019465:171323-171342 | None:intergenic | 40.0% | |
AATTCGTGAAGCTCGTGAAA+GGG | + | tig0019465:171426-171445 | Msa1374180:CDS | 40.0% | |
! | ATTTGCTGATGCAAGAGAGA+GGG | + | tig0019465:171450-171469 | Msa1374180:CDS | 40.0% |
! | ACATTTTGAATGGGCGAGAA+AGG | + | tig0019465:171512-171531 | Msa1374180:CDS | 40.0% |
! | TTGCTTTGTTCCATTGCTTC+TGG | - | tig0019465:171743-171762 | None:intergenic | 40.0% |
! | TCTGAAGTTCGTGATTCTAC+TGG | + | tig0019465:171901-171920 | Msa1374180:intron | 40.0% |
CTGAAGTTCGTGATTCTACT+GGG | + | tig0019465:171902-171921 | Msa1374180:intron | 40.0% | |
TGAAGTTCGTGATTCTACTG+GGG | + | tig0019465:171903-171922 | Msa1374180:intron | 40.0% | |
ATCACTGTTCTACGTTATGC+AGG | + | tig0019465:172071-172090 | Msa1374180:intron | 40.0% | |
! | TCGATCACGCATACTCTTTT+CGG | - | tig0019465:172109-172128 | None:intergenic | 40.0% |
ACAATATTCGTTCCTGCAGA+GGG | + | tig0019465:172209-172228 | Msa1374180:intron | 40.0% | |
GATGTTAAAAGGTGGTCAAG+TGG | + | tig0019465:172252-172271 | Msa1374180:CDS | 40.0% | |
TATTGCATATGAACTGGCCA+TGG | + | tig0019465:172403-172422 | Msa1374180:intron | 40.0% | |
GCTTTCCTTGTAAACTTCAG+GGG | + | tig0019465:172449-172468 | Msa1374180:intron | 40.0% | |
TTACTCCCCTGAAGTTTACA+AGG | - | tig0019465:172457-172476 | None:intergenic | 40.0% | |
TTCGAGACTCGAATGAACAA+TGG | + | tig0019465:172505-172524 | Msa1374180:intron | 40.0% | |
TCGAGACTCGAATGAACAAT+GGG | + | tig0019465:172506-172525 | Msa1374180:intron | 40.0% | |
TAGACTCCACAGATAAGCAA+GGG | - | tig0019465:172542-172561 | None:intergenic | 40.0% | |
ATAGACTCCACAGATAAGCA+AGG | - | tig0019465:172543-172562 | None:intergenic | 40.0% | |
ACTTGAATTTCGCAGATCCT+TGG | + | tig0019465:172841-172860 | Msa1374180:intron | 40.0% | |
CTTGAATTTCGCAGATCCTT+GGG | + | tig0019465:172842-172861 | Msa1374180:intron | 40.0% | |
AATTGGTTGCCAACCACTAT+CGG | - | tig0019465:172869-172888 | None:intergenic | 40.0% | |
AGCTTTCTTTACATCAGGTG+TGG | - | tig0019465:172911-172930 | None:intergenic | 40.0% | |
CGGTAAGCTTTCTTTACATC+AGG | - | tig0019465:172916-172935 | None:intergenic | 40.0% | |
! | GCAAAAGTACACTTGTGAGA+AGG | + | tig0019465:172993-173012 | Msa1374180:CDS | 40.0% |
TTGGAGAAAGAACGGTCAAT+GGG | - | tig0019465:173092-173111 | None:intergenic | 40.0% | |
TTTGGAGAAAGAACGGTCAA+TGG | - | tig0019465:173093-173112 | None:intergenic | 40.0% | |
GACCGTTCTTTCTCCAAAAA+TGG | + | tig0019465:173095-173114 | Msa1374180:intron | 40.0% | |
ATTGATGTCTTCAGGAAGCA+TGG | + | tig0019465:173360-173379 | Msa1374180:intron | 40.0% | |
AGCATGGAACAGATTCAACA+TGG | + | tig0019465:173376-173395 | Msa1374180:CDS | 40.0% | |
! | GACTTTTCCAACGGAATGAG+AGG | - | tig0019465:167240-167259 | None:intergenic | 45.0% |
! | CTTTGTTAGTGTTGAGGTGG+TGG | - | tig0019465:167435-167454 | None:intergenic | 45.0% |
TCGTCGAATTGAGAGAAGCT+TGG | - | tig0019465:167536-167555 | None:intergenic | 45.0% | |
!! | AGCTCTGGAAGTTCGAGAAT+CGG | - | tig0019465:167602-167621 | None:intergenic | 45.0% |
AACTTCCAGAGCTCAAGGAA+AGG | + | tig0019465:167609-167628 | Msa1374180:CDS | 45.0% | |
ATTCTCCTTTCCTTGAGCTC+TGG | - | tig0019465:167617-167636 | None:intergenic | 45.0% | |
AGAGCTCAAGGAAAGGAGAA+TGG | + | tig0019465:167616-167635 | Msa1374180:CDS | 45.0% | |
! | AGACACTGCTGTACCTTTTG+AGG | + | tig0019465:167700-167719 | Msa1374180:CDS | 45.0% |
! | CGTTTCGATGCTTTAGGCTT+CGG | - | tig0019465:167734-167753 | None:intergenic | 45.0% |
!! | CGAAGCCTAAAGCATCGAAA+CGG | + | tig0019465:167732-167751 | Msa1374180:CDS | 45.0% |
ACTCACCGTTTCGATGCTTT+AGG | - | tig0019465:167740-167759 | None:intergenic | 45.0% | |
ATGGTCTATACCAGCAGCAA+AGG | + | tig0019465:168729-168748 | Msa1374180:CDS | 45.0% | |
!! | GAAAAAGCATCCTTTGCTGC+TGG | - | tig0019465:168742-168761 | None:intergenic | 45.0% |
!!! | GCAGCAAAGGATGCTTTTTC+TGG | + | tig0019465:168742-168761 | Msa1374180:CDS | 45.0% |
CTGGTATTCATTGTGACGAG+GGG | + | tig0019465:168761-168780 | Msa1374180:CDS | 45.0% | |
TGTGACGAGGGGATAAAAGA+AGG | + | tig0019465:168772-168791 | Msa1374180:CDS | 45.0% | |
!! | ATGTGCCACTTTGAGATGCT+TGG | - | tig0019465:169161-169180 | None:intergenic | 45.0% |
TTCTAGGTACGTCGGTGAAT+CGG | - | tig0019465:169202-169221 | None:intergenic | 45.0% | |
TTGAGTCAACCGTGTCTTCT+AGG | - | tig0019465:169218-169237 | None:intergenic | 45.0% | |
! | CACGGTTGACTCAAATTCAG+CGG | + | tig0019465:169224-169243 | Msa1374180:CDS | 45.0% |
! | CAGCTTCTGTAGCTGCTTTA+AGG | + | tig0019465:169250-169269 | Msa1374180:CDS | 45.0% |
GGTTAAGGAATATTGGGAGC+AGG | + | tig0019465:169767-169786 | Msa1374180:CDS | 45.0% | |
GAATATTGGGAGCAGGAGAA+TGG | + | tig0019465:169774-169793 | Msa1374180:CDS | 45.0% | |
GCAGGAGAATGGTGAAGAAA+AGG | + | tig0019465:169785-169804 | Msa1374180:CDS | 45.0% | |
AGTGACAGACAAGAGGTTGA+AGG | + | tig0019465:169920-169939 | Msa1374180:CDS | 45.0% | |
GGCTCTGTAATTAACCTAGG+TGG | + | tig0019465:169996-170015 | Msa1374180:CDS | 45.0% | |
TCCGGAGCTATTAGACAATG+AGG | + | tig0019465:170235-170254 | Msa1374180:CDS | 45.0% | |
CCCTCATTGTCTAATAGCTC+CGG | - | tig0019465:170239-170258 | None:intergenic | 45.0% | |
CCGGAGCTATTAGACAATGA+GGG | + | tig0019465:170236-170255 | Msa1374180:CDS | 45.0% | |
CGGAGCTATTAGACAATGAG+GGG | + | tig0019465:170237-170256 | Msa1374180:CDS | 45.0% | |
TCTGAATGATGAGGACTGCA+CGG | - | tig0019465:170263-170282 | None:intergenic | 45.0% | |
!! | GAAGGAATGCATCTGGTTCT+TGG | + | tig0019465:170339-170358 | Msa1374180:CDS | 45.0% |
ATCAGTGGCTTCTCTCCAAT+AGG | - | tig0019465:170390-170409 | None:intergenic | 45.0% | |
CAATGTCAAGGAAACACTGG+AGG | + | tig0019465:170427-170446 | Msa1374180:CDS | 45.0% | |
!! | CGAGGTCATTTTCACAAGCA+TGG | - | tig0019465:170544-170563 | None:intergenic | 45.0% |
TGCTTGTGAAAATGACCTCG+AGG | + | tig0019465:170544-170563 | Msa1374180:CDS | 45.0% | |
GCTTGTGAAAATGACCTCGA+GGG | + | tig0019465:170545-170564 | Msa1374180:CDS | 45.0% | |
GATTTCTGCGAGAAACATGC+AGG | + | tig0019465:170905-170924 | Msa1374180:CDS | 45.0% | |
CACTGTTTCACTGAGTACAG+GGG | - | tig0019465:170957-170976 | None:intergenic | 45.0% | |
TGTGTCAGATGAAGAGATCG+AGG | + | tig0019465:171174-171193 | Msa1374180:CDS | 45.0% | |
GATACCCTTCAAAGAAGAGG+AGG | + | tig0019465:171231-171250 | Msa1374180:CDS | 45.0% | |
ATCCGTGACAAAGGAAGTGA+AGG | + | tig0019465:171294-171313 | Msa1374180:CDS | 45.0% | |
AAGGAAGTGAAGGAAGCCAA+TGG | + | tig0019465:171304-171323 | Msa1374180:CDS | 45.0% | |
AGCCAATGGTAAGTCACAGA+AGG | + | tig0019465:171318-171337 | Msa1374180:CDS | 45.0% | |
TGGTAAGTCACAGAAGGTAG+AGG | + | tig0019465:171324-171343 | Msa1374180:CDS | 45.0% | |
TAAGTCACAGAAGGTAGAGG+TGG | + | tig0019465:171327-171346 | Msa1374180:CDS | 45.0% | |
ACAGAAGGTAGAGGTGGATA+GGG | + | tig0019465:171333-171352 | Msa1374180:CDS | 45.0% | |
CAATTCGTGAAGCTCGTGAA+AGG | + | tig0019465:171425-171444 | Msa1374180:CDS | 45.0% | |
! | CATTTGCTGATGCAAGAGAG+AGG | + | tig0019465:171449-171468 | Msa1374180:CDS | 45.0% |
! | TCTGGTCCAGAGAAGTATGT+TGG | + | tig0019465:171712-171731 | Msa1374180:CDS | 45.0% |
GATGCACCAACATACTTCTC+TGG | - | tig0019465:171721-171740 | None:intergenic | 45.0% | |
!! | GGTACCGATATCAGGTAAAG+TGG | - | tig0019465:171817-171836 | None:intergenic | 45.0% |
GATTCTACTGGGGTCTTTGA+TGG | + | tig0019465:171913-171932 | Msa1374180:CDS | 45.0% | |
CTGCTCAGAGATGTAAAGCT+AGG | + | tig0019465:171950-171969 | Msa1374180:CDS | 45.0% | |
TCCTATTCTCTGATGCCTCT+CGG | - | tig0019465:171977-171996 | None:intergenic | 45.0% | |
TCAGAGAATAGGAGAACGTG+TGG | + | tig0019465:171984-172003 | Msa1374180:CDS | 45.0% | |
GAATAGGAGAACGTGTGGTA+TGG | + | tig0019465:171989-172008 | Msa1374180:intron | 45.0% | |
GTTCTACGTTATGCAGGCAA+AGG | + | tig0019465:172077-172096 | Msa1374180:intron | 45.0% | |
CACAATATTCGTTCCTGCAG+AGG | + | tig0019465:172208-172227 | Msa1374180:intron | 45.0% | |
CTCTCGATGCCGATGTTAAA+AGG | + | tig0019465:172241-172260 | Msa1374180:CDS | 45.0% | |
TCGATGCCGATGTTAAAAGG+TGG | + | tig0019465:172244-172263 | Msa1374180:CDS | 45.0% | |
TAAAAGGTGGTCAAGTGGGA+AGG | + | tig0019465:172257-172276 | Msa1374180:CDS | 45.0% | |
CGAGACTCGAATGAACAATG+GGG | + | tig0019465:172507-172526 | Msa1374180:intron | 45.0% | |
GAGACTCGAATGAACAATGG+GGG | + | tig0019465:172508-172527 | Msa1374180:intron | 45.0% | |
AGACTCGAATGAACAATGGG+GGG | + | tig0019465:172509-172528 | Msa1374180:intron | 45.0% | |
! | AGAGTACCCTTGCTTATCTG+TGG | + | tig0019465:172533-172552 | Msa1374180:intron | 45.0% |
ATTGGTTGCCAACCACTATC+GGG | - | tig0019465:172868-172887 | None:intergenic | 45.0% | |
! | GCACACAAAGAGTGGCTTTA+CGG | - | tig0019465:172936-172955 | None:intergenic | 45.0% |
GGCAAATTTAGAAGGCCTGT+AGG | + | tig0019465:173513-173532 | Msa1374180:three_prime_UTR | 45.0% | |
GTAAGCAGATCTTCCGGTGA+CGG | - | tig0019465:167477-167496 | None:intergenic | 50.0% | |
ACCGGAAGATCTGCTTACGA+CGG | + | tig0019465:167479-167498 | Msa1374180:CDS | 50.0% | |
TCTCGAACTTCCAGAGCTCA+AGG | + | tig0019465:167604-167623 | Msa1374180:CDS | 50.0% | |
AAGTGTAAGCAGGGACAGCA+TGG | - | tig0019465:168666-168685 | None:intergenic | 50.0% | |
GACGAGGGGATAAAAGAAGG+TGG | + | tig0019465:168775-168794 | Msa1374180:CDS | 50.0% | |
GATGCATGCGAGACTAGCAA+CGG | + | tig0019465:169030-169049 | Msa1374180:CDS | 50.0% | |
TCTGTTACAGGCTGTGAAGG+AGG | - | tig0019465:169084-169103 | None:intergenic | 50.0% | |
!! | GGCACATATGAAAGTGCTGC+TGG | + | tig0019465:169174-169193 | Msa1374180:CDS | 50.0% |
ACCGACGTACCTAGAAGACA+CGG | + | tig0019465:169206-169225 | Msa1374180:CDS | 50.0% | |
ACCGTGTCTTCTAGGTACGT+CGG | - | tig0019465:169210-169229 | None:intergenic | 50.0% | |
! | TGTCAAGTGTCGCCTGAATC+AGG | - | tig0019465:169896-169915 | None:intergenic | 50.0% |
ATTCAGGCGACACTTGACAG+TGG | + | tig0019465:169897-169916 | Msa1374180:CDS | 50.0% | |
ACAGTGGAGTGACAGACAAG+AGG | + | tig0019465:169913-169932 | Msa1374180:CDS | 50.0% | |
TCATCGACGATTTCCCACCT+AGG | - | tig0019465:170013-170032 | None:intergenic | 50.0% | |
AGGTGGGAAATCGTCGATGA+TGG | + | tig0019465:170013-170032 | Msa1374180:CDS | 50.0% | |
GGTGGGAAATCGTCGATGAT+GGG | + | tig0019465:170014-170033 | Msa1374180:CDS | 50.0% | |
CACAGAAGGTAGAGGTGGAT+AGG | + | tig0019465:171332-171351 | Msa1374180:CDS | 50.0% | |
TCCATTGCAGTCTTCTCAGC+CGG | - | tig0019465:171571-171590 | None:intergenic | 50.0% | |
GTTGGTGCATCCAGAAGCAA+TGG | + | tig0019465:171730-171749 | Msa1374180:CDS | 50.0% | |
GATGTAAAGCTAGGTCCGAG+AGG | + | tig0019465:171959-171978 | Msa1374180:CDS | 50.0% | |
!! | TCCGAGAGGCATCAGAGAAT+AGG | + | tig0019465:171973-171992 | Msa1374180:CDS | 50.0% |
ACTCGTGCAGAAAGAGCAAG+AGG | + | tig0019465:172128-172147 | Msa1374180:CDS | 50.0% | |
ATCGGGATGCACACAAAGAG+TGG | - | tig0019465:172944-172963 | None:intergenic | 50.0% | |
!! | GGCTCTGAACTCCATGACGA+CGG | - | tig0019465:167414-167433 | None:intergenic | 55.0% |
TCCAACAGCTACTCCGTCAC+CGG | + | tig0019465:167461-167480 | Msa1374180:CDS | 55.0% | |
GCCGTCGTAAGCAGATCTTC+CGG | - | tig0019465:167483-167502 | None:intergenic | 55.0% | |
!! | CTGGATTCTGAGGTGTTGCC+CGG | - | tig0019465:170686-170705 | None:intergenic | 55.0% |
ACCGGCTGAGAAGACTGCAA+TGG | + | tig0019465:171567-171586 | Msa1374180:CDS | 55.0% | |
TAAAGCTGAACGCGCTGCTG+TGG | + | tig0019465:171600-171619 | Msa1374180:CDS | 55.0% | |
TGTGGAGAGAGCAACTGCAG+AGG | + | tig0019465:171618-171637 | Msa1374180:CDS | 55.0% | |
CCACAGAGTGCATGACCATC+AGG | - | tig0019465:173435-173454 | None:intergenic | 55.0% | |
CCTGATGGTCATGCACTCTG+TGG | + | tig0019465:173432-173451 | Msa1374180:three_prime_UTR | 55.0% | |
GAACTCCATGACGACGGCGA+CGG | - | tig0019465:167408-167427 | None:intergenic | 60.0% | |
!! | TCCGGTGACGGAGTAGCTGT+TGG | - | tig0019465:167465-167484 | None:intergenic | 60.0% |
TGCAAGAGAGAGGGCAGCTC+TGG | + | tig0019465:171459-171478 | Msa1374180:CDS | 60.0% | |
!! | AGAGAGGGCAGCTCTGGAGA+GGG | + | tig0019465:171465-171484 | Msa1374180:CDS | 60.0% |
! | AAGAGCACGTGCCCTGGAGA+GGG | + | tig0019465:171642-171661 | Msa1374180:CDS | 60.0% |
CTCAGACAGTGCCCTCTCCA+GGG | - | tig0019465:171656-171675 | None:intergenic | 60.0% | |
TCTCAGACAGTGCCCTCTCC+AGG | - | tig0019465:171657-171676 | None:intergenic | 60.0% | |
!! | GGAGAGGGCACTGTCTGAGA+AGG | + | tig0019465:171657-171676 | Msa1374180:CDS | 60.0% |
GAGCTTCAGCTACCCTCTGC+AGG | - | tig0019465:172224-172243 | None:intergenic | 60.0% | |
AGGTGGTCAAGTGGGAAGGC+AGG | + | tig0019465:172261-172280 | Msa1374180:CDS | 60.0% | |
CAGATCCTTGGGCCCGATAG+TGG | + | tig0019465:172853-172872 | Msa1374180:intron | 60.0% | |
! | TCCTTGGGCCCGATAGTGGT+TGG | + | tig0019465:172857-172876 | Msa1374180:CDS | 60.0% |
CCTCGCTGCTGCAGCTTATC+GGG | - | tig0019465:172961-172980 | None:intergenic | 60.0% | |
CCCTCGCTGCTGCAGCTTAT+CGG | - | tig0019465:172962-172981 | None:intergenic | 60.0% | |
CCGATAAGCTGCAGCAGCGA+GGG | + | tig0019465:172959-172978 | Msa1374180:CDS | 60.0% | |
CGATAAGCTGCAGCAGCGAG+GGG | + | tig0019465:172960-172979 | Msa1374180:CDS | 60.0% | |
TAGGGTGTGTGGCTCCCTCG+AGG | - | tig0019465:170562-170581 | None:intergenic | 65.0% | |
CGAGGGAGCCACACACCCTA+TGG | + | tig0019465:170562-170581 | Msa1374180:CDS | 65.0% | |
!! | GAGAGAGGGCAGCTCTGGAG+AGG | + | tig0019465:171464-171483 | Msa1374180:CDS | 65.0% |
! | AGAGGCAAGAGCACGTGCCC+TGG | + | tig0019465:171636-171655 | Msa1374180:CDS | 65.0% |
! | CAAGAGCACGTGCCCTGGAG+AGG | + | tig0019465:171641-171660 | Msa1374180:CDS | 65.0% |
GCCAACCACTATCGGGCCCA+AGG | - | tig0019465:172861-172880 | None:intergenic | 65.0% | |
CCCGATAAGCTGCAGCAGCG+AGG | + | tig0019465:172958-172977 | Msa1374180:CDS | 65.0% | |
TCTCGCCGTCGCCGTCGTCA+TGG | + | tig0019465:167400-167419 | Msa1374180:exon | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019465 | gene | 167229 | 173658 | 167229 | ID=Msa1374180;Name=Msa1374180 |
tig0019465 | mRNA | 167229 | 173658 | 167229 | ID=Msa1374180-mRNA-1;Parent=Msa1374180;Name=Msa1374180-mRNA-1;_AED=0.04;_eAED=0.04;_QI=190|1|0.85|1|1|1|7|249|1368 |
tig0019465 | exon | 167229 | 167753 | 167229 | ID=Msa1374180-mRNA-1:exon:3669;Parent=Msa1374180-mRNA-1 |
tig0019465 | exon | 168489 | 171793 | 168489 | ID=Msa1374180-mRNA-1:exon:3670;Parent=Msa1374180-mRNA-1 |
tig0019465 | exon | 171908 | 172005 | 171908 | ID=Msa1374180-mRNA-1:exon:3671;Parent=Msa1374180-mRNA-1 |
tig0019465 | exon | 172093 | 172158 | 172093 | ID=Msa1374180-mRNA-1:exon:3672;Parent=Msa1374180-mRNA-1 |
tig0019465 | exon | 172228 | 172317 | 172228 | ID=Msa1374180-mRNA-1:exon:3673;Parent=Msa1374180-mRNA-1 |
tig0019465 | exon | 172856 | 173032 | 172856 | ID=Msa1374180-mRNA-1:exon:3674;Parent=Msa1374180-mRNA-1 |
tig0019465 | exon | 173374 | 173658 | 173374 | ID=Msa1374180-mRNA-1:exon:3675;Parent=Msa1374180-mRNA-1 |
tig0019465 | five_prime_UTR | 167229 | 167418 | 167229 | ID=Msa1374180-mRNA-1:five_prime_utr;Parent=Msa1374180-mRNA-1 |
tig0019465 | CDS | 167419 | 167753 | 167419 | ID=Msa1374180-mRNA-1:cds;Parent=Msa1374180-mRNA-1 |
tig0019465 | CDS | 168489 | 171793 | 168489 | ID=Msa1374180-mRNA-1:cds;Parent=Msa1374180-mRNA-1 |
tig0019465 | CDS | 171908 | 172005 | 171908 | ID=Msa1374180-mRNA-1:cds;Parent=Msa1374180-mRNA-1 |
tig0019465 | CDS | 172093 | 172158 | 172093 | ID=Msa1374180-mRNA-1:cds;Parent=Msa1374180-mRNA-1 |
tig0019465 | CDS | 172228 | 172317 | 172228 | ID=Msa1374180-mRNA-1:cds;Parent=Msa1374180-mRNA-1 |
tig0019465 | CDS | 172856 | 173032 | 172856 | ID=Msa1374180-mRNA-1:cds;Parent=Msa1374180-mRNA-1 |
tig0019465 | CDS | 173374 | 173409 | 173374 | ID=Msa1374180-mRNA-1:cds;Parent=Msa1374180-mRNA-1 |
tig0019465 | three_prime_UTR | 173410 | 173658 | 173410 | ID=Msa1374180-mRNA-1:three_prime_utr;Parent=Msa1374180-mRNA-1 |
Gene Sequence |
Protein sequence |