Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043610 | XP_013466131.1 | 87.006 | 1239 | 49 | 8 | 28 | 1158 | 134 | 1368 | 0.0 | 2054 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043610 | sp|Q9FWS1|AUL1_ARATH | 57.962 | 314 | 117 | 7 | 852 | 1158 | 1145 | 1450 | 7.24e-89 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043610 | A0A072VPW1 | 87.006 | 1239 | 49 | 8 | 28 | 1158 | 134 | 1368 | 0.0 | 2054 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003520 | Msa1043610 | 0.936353 | 1.987961e-97 | -8.615850e-47 |
| Msa0689250 | Msa1043610 | 0.806932 | 6.470721e-50 | -8.615850e-47 |
| Msa0146430 | Msa1043610 | 0.942727 | 4.298324e-102 | -8.615850e-47 |
| Msa1014010 | Msa1043610 | 0.810207 | 1.292563e-50 | -8.615850e-47 |
| Msa1043610 | Msa1325060 | 0.802074 | 6.667013e-49 | -8.615850e-47 |
| Msa1043610 | Msa1374180 | 0.972929 | 1.417049e-135 | -8.615850e-47 |
| Msa1043610 | Msa1382680 | 0.921293 | 4.309405e-88 | -8.615850e-47 |
| Msa0241240 | Msa1043610 | 0.812401 | 4.318358e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043610 | MtrunA17_Chr1g0155381 | 87.006 | 1239 | 49 | 8 | 28 | 1158 | 134 | 1368 | 0.0 | 2054 |
| Msa1043610 | MtrunA17_Chr8g0372931 | 48.705 | 386 | 161 | 9 | 806 | 1158 | 1058 | 1439 | 9.54e-87 | 308 |
| Msa1043610 | MtrunA17_Chr8g0384651 | 64.744 | 156 | 55 | 0 | 1002 | 1157 | 756 | 911 | 2.15e-59 | 221 |
| Msa1043610 | MtrunA17_Chr3g0130631 | 64.103 | 156 | 56 | 0 | 1002 | 1157 | 578 | 733 | 5.70e-59 | 217 |
| Msa1043610 | MtrunA17_Chr3g0125121 | 51.337 | 187 | 80 | 3 | 981 | 1157 | 334 | 519 | 1.53e-52 | 193 |
| Msa1043610 | MtrunA17_Chr3g0141421 | 56.383 | 94 | 41 | 0 | 1062 | 1155 | 596 | 689 | 4.50e-32 | 134 |
| Msa1043610 | MtrunA17_Chr2g0304091 | 53.125 | 96 | 45 | 0 | 1062 | 1157 | 357 | 452 | 1.16e-27 | 118 |
| Msa1043610 | MtrunA17_Chr8g0376701 | 51.042 | 96 | 47 | 0 | 1062 | 1157 | 364 | 459 | 8.61e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043610 | AT1G75310.2 | 58.466 | 313 | 118 | 6 | 852 | 1158 | 1145 | 1451 | 1.82e-90 | 320 |
| Msa1043610 | AT1G75310.1 | 57.643 | 314 | 116 | 7 | 852 | 1158 | 1145 | 1448 | 2.15e-89 | 317 |
| Msa1043610 | AT4G36520.1 | 49.162 | 358 | 148 | 10 | 822 | 1158 | 1078 | 1422 | 8.14e-80 | 288 |
| Msa1043610 | AT4G12780.3 | 61.333 | 150 | 58 | 0 | 1008 | 1157 | 726 | 875 | 4.01e-51 | 196 |
| Msa1043610 | AT4G12770.2 | 59.615 | 156 | 62 | 1 | 1002 | 1157 | 733 | 887 | 5.06e-51 | 195 |
| Msa1043610 | AT4G12770.1 | 60.667 | 150 | 59 | 0 | 1008 | 1157 | 740 | 889 | 5.46e-51 | 195 |
| Msa1043610 | AT4G12780.1 | 61.333 | 150 | 58 | 0 | 1008 | 1157 | 753 | 902 | 5.51e-51 | 195 |
| Msa1043610 | AT4G12780.2 | 56.287 | 167 | 56 | 2 | 1008 | 1157 | 726 | 892 | 5.63e-48 | 186 |
| Msa1043610 | AT1G21660.1 | 52.381 | 147 | 70 | 0 | 1011 | 1157 | 375 | 521 | 1.70e-45 | 173 |
| Msa1043610 | AT1G75100.1 | 59.341 | 91 | 37 | 0 | 1064 | 1154 | 556 | 646 | 1.29e-31 | 133 |
| Msa1043610 | AT1G30280.1 | 50.000 | 84 | 41 | 1 | 1068 | 1150 | 361 | 444 | 1.53e-18 | 90.5 |
| Msa1043610 | AT1G30280.2 | 47.253 | 91 | 44 | 3 | 1068 | 1155 | 361 | 450 | 5.00e-16 | 82.8 |
Find 236 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTCTGTAGCTGCTTTA+AGG | 0.107747 | 7_2:-1819583 | Msa1043610:CDS |
| CCCTCGCTGCTGCAGCTTAT+CGG | 0.205621 | 7_2:+1815883 | None:intergenic |
| ACAGCCTGTAACAGATAATT+TGG | 0.210029 | 7_2:-1819744 | Msa1043610:CDS |
| TTATCCAAATTATCTGTTAC+AGG | 0.228191 | 7_2:+1819740 | None:intergenic |
| TTGAGTCAACCGTGTCTTCT+AGG | 0.241410 | 7_2:+1819618 | None:intergenic |
| AATTATTCCTTGATAAATAA+AGG | 0.257013 | 7_2:+1815213 | None:intergenic |
| TTGCTTTGTTCCATTGCTTC+TGG | 0.266976 | 7_2:+1817100 | None:intergenic |
| GTTAACCAAGGAAGTGAAAA+TGG | 0.270117 | 7_2:-1820223 | Msa1043610:CDS |
| GACTGTTTCTTGACATTATT+AGG | 0.275632 | 7_2:+1819881 | None:intergenic |
| GATTCTACTGGGGTCTTTGA+TGG | 0.278154 | 7_2:-1816927 | Msa1043610:CDS |
| GCAAAGGCTAGTGATTTAAA+TGG | 0.292351 | 7_2:-1818338 | Msa1043610:CDS |
| CTCTCGATGCCGATGTTAAA+AGG | 0.297624 | 7_2:-1816599 | Msa1043610:CDS |
| ATATGACATATTGATCGTTT+TGG | 0.308968 | 7_2:+1820252 | None:intergenic |
| ACTATTGCTGTTAAAGGAAT+TGG | 0.313533 | 7_2:+1815959 | None:intergenic |
| TCTCTTCATCGTGGTGAATA+TGG | 0.316778 | 7_2:+1818375 | None:intergenic |
| CCTGACATGTGTTATTCTAT+AGG | 0.321993 | 7_2:-1820367 | None:intergenic |
| ACCTCTTCCTTATGTTTGTC+TGG | 0.323897 | 7_2:+1819228 | None:intergenic |
| TCTGAAGTTCGTGATTCTAC+TGG | 0.332930 | 7_2:-1816939 | Msa1043610:intron |
| CTTACTTTCTCTGTTCTCAT+TGG | 0.337977 | 7_2:+1819327 | None:intergenic |
| TTCAACTTCTCAGTTTCATC+TGG | 0.344128 | 7_2:+1818116 | None:intergenic |
| GTGGTTACTATTGCTGTTAA+AGG | 0.345660 | 7_2:+1815953 | None:intergenic |
| ATCAATTCCCAGCAAAATAA+AGG | 0.348948 | 7_2:-1817582 | Msa1043610:CDS |
| GAAGGAATGCATCTGGTTCT+TGG | 0.351045 | 7_2:-1818496 | Msa1043610:CDS |
| CCTCGCTGCTGCAGCTTATC+GGG | 0.364311 | 7_2:+1815884 | None:intergenic |
| GGAAGTGAAAATGGAACAAA+TGG | 0.368141 | 7_2:-1820214 | Msa1043610:CDS |
| TCTCAGACAGTGCCCTCTCC+AGG | 0.368364 | 7_2:+1817186 | None:intergenic |
| ATCTGGTTCATAGCTAGAAC+TGG | 0.372127 | 7_2:+1818133 | None:intergenic |
| TTGGCATTCTTCCTGATCAA+TGG | 0.376138 | 7_2:+1818745 | None:intergenic |
| TTTCACCTCCTCTTCTTTGA+AGG | 0.377050 | 7_2:+1817604 | None:intergenic |
| TGCAAGAGAGAGGGCAGCTC+TGG | 0.378359 | 7_2:-1817381 | Msa1043610:CDS |
| TGTCAAGTGTCGCCTGAATC+AGG | 0.382236 | 7_2:+1818942 | None:intergenic |
| CGGTAAGCTTTCTTTACATC+AGG | 0.383896 | 7_2:+1815929 | None:intergenic |
| AAGGCAAACATTTGGAGAAA+TGG | 0.384101 | 7_2:-1819388 | Msa1043610:CDS |
| GAGAAAGTAAGATCAGATAT+CGG | 0.385527 | 7_2:-1819315 | Msa1043610:CDS |
| CTTGAATTTCGCAGATCCTT+GGG | 0.387936 | 7_2:-1816000 | Msa1043610:intron |
| TGGTGAAACAAACCTGATTC+AGG | 0.391490 | 7_2:-1818954 | Msa1043610:CDS |
| ATGAAGTAGGCAAATTTAGA+AGG | 0.391541 | 7_2:-1815337 | Msa1043610:three_prime_UTR |
| CTGCAAGTTTCTTCTGATGT+AGG | 0.393651 | 7_2:-1819357 | Msa1043610:CDS |
| GTCAGTTTCACCAACATTTG+TGG | 0.394233 | 7_2:+1817817 | None:intergenic |
| CTGAAGTTCGTGATTCTACT+GGG | 0.396066 | 7_2:-1816938 | Msa1043610:intron |
| ACTTTGAGATGCTTGGCATT+TGG | 0.397058 | 7_2:+1819682 | None:intergenic |
| GCACACAAAGAGTGGCTTTA+CGG | 0.399428 | 7_2:+1815909 | None:intergenic |
| AAATAAGCCTTTATTTATCA+AGG | 0.399742 | 7_2:-1815220 | Msa1043610:three_prime_UTR |
| AGGTTAATTACAGAGCCTTT+TGG | 0.402036 | 7_2:+1818845 | None:intergenic |
| ATTAATACAAGGCAAACATT+TGG | 0.403690 | 7_2:-1819396 | Msa1043610:CDS |
| GGAGACAATTTCAATTTGTT+CGG | 0.404035 | 7_2:+1819249 | None:intergenic |
| TTCTAGGTACGTCGGTGAAT+CGG | 0.404391 | 7_2:+1819634 | None:intergenic |
| TATAGCTTTCCCTCCATTGT+TGG | 0.405404 | 7_2:+1819979 | None:intergenic |
| TTGAGAGCTATTCAGGAACT+TGG | 0.413355 | 7_2:-1818716 | Msa1043610:CDS |
| CAGATCCTTGGGCCCGATAG+TGG | 0.417009 | 7_2:-1815989 | Msa1043610:CDS |
| AGAGGCTCAAATGAAAATAA+AGG | 0.417325 | 7_2:-1819549 | Msa1043610:intron |
| ACTTGAATTTCGCAGATCCT+TGG | 0.423963 | 7_2:-1816001 | Msa1043610:intron |
| GCAAAACCAAGATCAGTGTT+TGG | 0.424713 | 7_2:-1817783 | Msa1043610:CDS |
| GACTAAATGGTCCATTGATC+AGG | 0.429201 | 7_2:-1818756 | Msa1043610:CDS |
| GGAGATAAGAGAAGAAGAAC+CGG | 0.431525 | 7_2:-1818171 | Msa1043610:CDS |
| AAGAGGTAGAACATTCCTAT+TGG | 0.433303 | 7_2:-1818463 | Msa1043610:CDS |
| TTCCTTCACTTCCTTTGTCA+CGG | 0.434366 | 7_2:+1817544 | None:intergenic |
| TAAAGACGAGCAGAGCTAAA+TGG | 0.438524 | 7_2:-1820123 | Msa1043610:CDS |
| TACCTTCTGTGACTTACCAT+TGG | 0.438804 | 7_2:+1817520 | None:intergenic |
| AAGGAATGCATCTGGTTCTT+GGG | 0.441677 | 7_2:-1818495 | Msa1043610:CDS |
| CTGGATTCTGAGGTGTTGCC+CGG | 0.443227 | 7_2:+1818152 | None:intergenic |
| CCACAGAGTGCATGACCATC+AGG | 0.447760 | 7_2:+1815410 | None:intergenic |
| TCCATTGCAGTCTTCTCAGC+CGG | 0.447833 | 7_2:+1817272 | None:intergenic |
| ATTTGTGGAATCATTGTCAA+TGG | 0.449575 | 7_2:+1817832 | None:intergenic |
| AAAGAATAGAGAAAGAGAAA+AGG | 0.450397 | 7_2:-1817459 | Msa1043610:CDS |
| GATGCACCAACATACTTCTC+TGG | 0.450847 | 7_2:+1817122 | None:intergenic |
| TCAATTAAACAAGTGTAAGC+AGG | 0.451248 | 7_2:+1820160 | None:intergenic |
| TCCTATTCTCTGATGCCTCT+CGG | 0.453315 | 7_2:+1816866 | None:intergenic |
| AGAAAGTAAGATCAGATATC+GGG | 0.453718 | 7_2:-1819314 | Msa1043610:CDS |
| TTTGTTCGGTGCTTCTTGTA+CGG | 0.456160 | 7_2:+1819263 | None:intergenic |
| TTCACCTCCTCTTCTTTGAA+GGG | 0.458847 | 7_2:+1817605 | None:intergenic |
| AATTGGTTGCCAACCACTAT+CGG | 0.462991 | 7_2:+1815976 | None:intergenic |
| AGGTGGGAAATCGTCGATGA+TGG | 0.467613 | 7_2:-1818822 | Msa1043610:CDS |
| GTGATATCACCTTCATTCAA+TGG | 0.473045 | 7_2:-1820277 | Msa1043610:CDS |
| CAGACTTCTGACTTTGATGA+AGG | 0.476599 | 7_2:-1817911 | Msa1043610:CDS |
| AGTTGAAGAAGTTGAGAACA+AGG | 0.478684 | 7_2:-1818885 | Msa1043610:CDS |
| CCCTCATTGTCTAATAGCTC+CGG | 0.479146 | 7_2:+1818599 | None:intergenic |
| CAAAAGTGTCAAGAAGTTGC+TGG | 0.481130 | 7_2:-1818974 | Msa1043610:CDS |
| CCGATAAGCTGCAGCAGCGA+GGG | 0.484078 | 7_2:-1815883 | Msa1043610:CDS |
| CACAGAAGGTAGAGGTGGAT+AGG | 0.484797 | 7_2:-1817508 | Msa1043610:CDS |
| CCAAGATCAGTGTTTGGAAA+AGG | 0.486328 | 7_2:-1817777 | Msa1043610:CDS |
| TCAAACTGATCTAATTTATG+AGG | 0.490972 | 7_2:-1818192 | Msa1043610:CDS |
| CGAGGGAGCCACACACCCTA+TGG | 0.495109 | 7_2:-1818273 | Msa1043610:CDS |
| TGAGTCTATAGAAATATGTA+TGG | 0.500843 | 7_2:-1817708 | Msa1043610:CDS |
| GCTATTCAGGAACTTGGAAA+TGG | 0.501968 | 7_2:-1818710 | Msa1043610:CDS |
| CTTCATCAAAGTCAGAAGTC+TGG | 0.502637 | 7_2:+1817912 | None:intergenic |
| TGATCTGCAGGATGATATAA+TGG | 0.503126 | 7_2:-1818023 | Msa1043610:intron |
| CATTCAAAATCTTTCAGCTA+TGG | 0.503489 | 7_2:-1817071 | Msa1043610:CDS |
| TACACTGTTTCACTGAGTAC+AGG | 0.506736 | 7_2:+1817884 | None:intergenic |
| GTGAAACTGACATGAAGGTT+AGG | 0.506937 | 7_2:-1817805 | Msa1043610:CDS |
| ATTGATGTCTTCAGGAAGCA+TGG | 0.507037 | 7_2:-1815482 | Msa1043610:intron |
| GAATATTGGGAGCAGGAGAA+TGG | 0.507785 | 7_2:-1819061 | Msa1043610:intron |
| ACAGAAGGTAGAGGTGGATA+GGG | 0.508513 | 7_2:-1817507 | Msa1043610:CDS |
| AGGTGGTCAAGTGGGAAGGC+AGG | 0.509799 | 7_2:-1816579 | Msa1043610:CDS |
| GCAGGAGAATGGTGAAGAAA+AGG | 0.512746 | 7_2:-1819050 | Msa1043610:intron |
| ATCAGTGGCTTCTCTCCAAT+AGG | 0.513023 | 7_2:+1818448 | None:intergenic |
| CTCAGACAGTGCCCTCTCCA+GGG | 0.513165 | 7_2:+1817187 | None:intergenic |
| TCCGAGAGGCATCAGAGAAT+AGG | 0.514883 | 7_2:-1816867 | Msa1043610:CDS |
| CTGAGATGCTTCACAAGAAG+AGG | 0.516080 | 7_2:+1817631 | None:intergenic |
| AGAGGCAAGAGCACGTGCCC+TGG | 0.516970 | 7_2:-1817204 | Msa1043610:CDS |
| AGAAATATGTATGGATGCAA+AGG | 0.520243 | 7_2:-1817699 | Msa1043610:CDS |
| ATGTGAATTGACAGAGTCTC+CGG | 0.521094 | 7_2:-1818618 | Msa1043610:CDS |
| ATTGGTTGCCAACCACTATC+GGG | 0.521170 | 7_2:+1815977 | None:intergenic |
| AAGTGAGAATAAAGTTGAAG+TGG | 0.522061 | 7_2:-1818657 | Msa1043610:CDS |
| GGCTCTGTAATTAACCTAGG+TGG | 0.523520 | 7_2:-1818839 | Msa1043610:CDS |
| ACAGATTCAACATGGAAGAA+AGG | 0.528950 | 7_2:-1815458 | Msa1043610:CDS |
| ACACCGTTTAATGAACCAAA+AGG | 0.529177 | 7_2:-1818860 | Msa1043610:CDS |
| ATGTTAATTGTGCTTCCTGA+TGG | 0.531295 | 7_2:-1815425 | Msa1043610:three_prime_UTR |
| TTTCTCATTTGCTTGACAAG+TGG | 0.531448 | 7_2:+1817298 | None:intergenic |
| ATTGTCTCCAGACAAACATA+AGG | 0.533755 | 7_2:-1819235 | Msa1043610:CDS |
| AAGAGCACGTGCCCTGGAGA+GGG | 0.533837 | 7_2:-1817198 | Msa1043610:CDS |
| TGACATTATTAGGTGAAGCA+TGG | 0.537366 | 7_2:+1819891 | None:intergenic |
| GCTCTGTAATTAACCTAGGT+GGG | 0.540673 | 7_2:-1818838 | Msa1043610:CDS |
| TGGAAGAAAATGCGAGTGAA+AGG | 0.540789 | 7_2:-1818253 | Msa1043610:CDS |
| TATAGGAGCAAAGTCAAAAG+TGG | 0.544215 | 7_2:-1820350 | Msa1043610:CDS |
| GACAATGATTCCACAAATGT+TGG | 0.545389 | 7_2:-1817827 | Msa1043610:CDS |
| TTATCTGTTACAGGCTGTGA+AGG | 0.546462 | 7_2:+1819749 | None:intergenic |
| TTGAATGAAGGTGATATCAC+CGG | 0.549105 | 7_2:+1820280 | None:intergenic |
| CAATTCGTGAAGCTCGTGAA+AGG | 0.549174 | 7_2:-1817415 | Msa1043610:CDS |
| AGATCGTGTTAATTCTTCAA+AGG | 0.551548 | 7_2:-1820309 | Msa1043610:CDS |
| CCCGATAAGCTGCAGCAGCG+AGG | 0.552225 | 7_2:-1815884 | Msa1043610:CDS |
| AGCAATGGAACAAAGCAAAA+CGG | 0.552231 | 7_2:-1817095 | Msa1043610:CDS |
| CTGCTCAGAGATGTAAAGCT+AGG | 0.553857 | 7_2:-1816890 | Msa1043610:CDS |
| ATGTGCCACTTTGAGATGCT+TGG | 0.554499 | 7_2:+1819675 | None:intergenic |
| GGAGAGGGCACTGTCTGAGA+AGG | 0.555104 | 7_2:-1817183 | Msa1043610:CDS |
| TTCTGTAGCTGCTTTAAGGA+AGG | 0.556360 | 7_2:-1819579 | Msa1043610:CDS |
| ATTGGCTATAAGCCAGAAGA+TGG | 0.556595 | 7_2:-1818785 | Msa1043610:CDS |
| AACAGTCTTTCAACAATGGA+GGG | 0.557749 | 7_2:-1819865 | Msa1043610:CDS |
| ATGGTCTATACCAGCAGCAA+AGG | 0.559400 | 7_2:-1820104 | Msa1043610:CDS |
| TATCAATGTCAAGGAAACAC+TGG | 0.561651 | 7_2:-1818411 | Msa1043610:CDS |
| ACACTGTTTCACTGAGTACA+GGG | 0.561909 | 7_2:+1817885 | None:intergenic |
| GCAGTTAATGAAGCAAGTTA+TGG | 0.562495 | 7_2:-1819022 | Msa1043610:CDS |
| AGCTTTCTTTACATCAGGTG+TGG | 0.562529 | 7_2:+1815934 | None:intergenic |
| CAGGATGATATAATGGTCAC+AGG | 0.563576 | 7_2:-1818016 | Msa1043610:intron |
| TAAAGCTGAACGCGCTGCTG+TGG | 0.563761 | 7_2:-1817240 | Msa1043610:CDS |
| GGTGGGAAATCGTCGATGAT+GGG | 0.564317 | 7_2:-1818821 | Msa1043610:CDS |
| TCCAGACAAACATAAGGAAG+AGG | 0.565417 | 7_2:-1819229 | Msa1043610:CDS |
| TCAAAATCTTTCAGCTATGG+TGG | 0.566831 | 7_2:-1817068 | Msa1043610:intron |
| AATTCGTGAAGCTCGTGAAA+GGG | 0.566984 | 7_2:-1817414 | Msa1043610:CDS |
| AAACAGTCTTTCAACAATGG+AGG | 0.567430 | 7_2:-1819866 | Msa1043610:CDS |
| ATCCGTGACAAAGGAAGTGA+AGG | 0.567826 | 7_2:-1817546 | Msa1043610:CDS |
| GCCAACCACTATCGGGCCCA+AGG | 0.567934 | 7_2:+1815984 | None:intergenic |
| ATGTTAAAAGGTGGTCAAGT+GGG | 0.568578 | 7_2:-1816587 | Msa1043610:CDS |
| GCAAAAGTACACTTGTGAGA+AGG | 0.569795 | 7_2:-1815849 | Msa1043610:CDS |
| TCCTTGGGCCCGATAGTGGT+TGG | 0.570322 | 7_2:-1815985 | Msa1043610:CDS |
| TCCGGAGCTATTAGACAATG+AGG | 0.570468 | 7_2:-1818600 | Msa1043610:CDS |
| TCATTCAGAATTAATAAGCA+TGG | 0.570815 | 7_2:-1818561 | Msa1043610:CDS |
| CAAGAGCACGTGCCCTGGAG+AGG | 0.571595 | 7_2:-1817199 | Msa1043610:CDS |
| TTCTGGTATTCATTGTGACG+AGG | 0.571760 | 7_2:-1820074 | Msa1043610:CDS |
| AATATGTATGGATGCAAAGG+AGG | 0.571943 | 7_2:-1817696 | Msa1043610:CDS |
| CTTATTAATTCTGAATGATG+AGG | 0.573496 | 7_2:+1818566 | None:intergenic |
| AGTGACAGACAAGAGGTTGA+AGG | 0.574258 | 7_2:-1818915 | Msa1043610:CDS |
| GTTGGTGCATCCAGAAGCAA+TGG | 0.578128 | 7_2:-1817110 | Msa1043610:CDS |
| AAGTGTAAGCAGGGACAGCA+TGG | 0.578502 | 7_2:+1820170 | None:intergenic |
| AAGAAACAGTCTTTCAACAA+TGG | 0.581600 | 7_2:-1819869 | Msa1043610:CDS |
| GAAGTGAAAATGGAACAAAT+GGG | 0.583313 | 7_2:-1820213 | Msa1043610:CDS |
| CGATAAGCTGCAGCAGCGAG+GGG | 0.583635 | 7_2:-1815882 | Msa1043610:CDS |
| ACTCGTGCAGAAAGAGCAAG+AGG | 0.584590 | 7_2:-1816712 | Msa1043610:CDS |
| GAGAGAGGGCAGCTCTGGAG+AGG | 0.586072 | 7_2:-1817376 | Msa1043610:CDS |
| AAAGGCTCTGTAATTAACCT+AGG | 0.588058 | 7_2:-1818842 | Msa1043610:CDS |
| CTGAAAGAAGCAGATCATGA+AGG | 0.589550 | 7_2:-1819201 | Msa1043610:CDS |
| TCAGATACCCTTCAAAGAAG+AGG | 0.590042 | 7_2:-1817612 | Msa1043610:CDS |
| TGAATGAAGGTGATATCACC+GGG | 0.590130 | 7_2:+1820281 | None:intergenic |
| TCTGGTATTCATTGTGACGA+GGG | 0.590444 | 7_2:-1820073 | Msa1043610:CDS |
| ATCGGGATGCACACAAAGAG+TGG | 0.590973 | 7_2:+1815901 | None:intergenic |
| TGTGACGAGGGGATAAAAGA+AGG | 0.591437 | 7_2:-1820061 | Msa1043610:CDS |
| CCGGAGCTATTAGACAATGA+GGG | 0.593751 | 7_2:-1818599 | Msa1043610:CDS |
| TCATCAAACATCCGTGACAA+AGG | 0.593967 | 7_2:-1817555 | Msa1043610:CDS |
| ATACATATTTCTATAGACTC+AGG | 0.594208 | 7_2:+1817710 | None:intergenic |
| GGCACATATGAAAGTGCTGC+TGG | 0.595442 | 7_2:-1819659 | Msa1043610:CDS |
| AACAGTCTACCAACAATGGA+GGG | 0.596418 | 7_2:-1819988 | Msa1043610:CDS |
| AATTCTTCAAAGGAAATCCC+CGG | 0.596957 | 7_2:-1820299 | Msa1043610:CDS |
| AGAGAGGGCAGCTCTGGAGA+GGG | 0.599872 | 7_2:-1817375 | Msa1043610:CDS |
| ATAGCTAGAACTGGATTCTG+AGG | 0.600865 | 7_2:+1818142 | None:intergenic |
| TGGTAAGTCACAGAAGGTAG+AGG | 0.601388 | 7_2:-1817516 | Msa1043610:CDS |
| ATAAAACATATCAACAGAGT+CGG | 0.601558 | 7_2:+1819826 | None:intergenic |
| AAGAAACAGTCTACCAACAA+TGG | 0.604493 | 7_2:-1819992 | Msa1043610:CDS |
| CATTGATACTTCGAGATCAA+CGG | 0.604620 | 7_2:-1819708 | Msa1043610:CDS |
| AGCCAATGGTAAGTCACAGA+AGG | 0.605760 | 7_2:-1817522 | Msa1043610:CDS |
| CAATTAAACAAGTGTAAGCA+GGG | 0.607398 | 7_2:+1820161 | None:intergenic |
| AGCTCATGTTTGTATGAAGT+AGG | 0.607464 | 7_2:-1815350 | Msa1043610:three_prime_UTR |
| GTTTAGCAATATCAATGTCA+AGG | 0.609500 | 7_2:-1818420 | Msa1043610:CDS |
| GTGATTTAAATGGAAATGTG+AGG | 0.611031 | 7_2:-1818328 | Msa1043610:CDS |
| CTGGTATTCATTGTGACGAG+GGG | 0.611620 | 7_2:-1820072 | Msa1043610:CDS |
| TCTGTTACAGGCTGTGAAGG+AGG | 0.611639 | 7_2:+1819752 | None:intergenic |
| CATTTGCTGATGCAAGAGAG+AGG | 0.611807 | 7_2:-1817391 | Msa1043610:CDS |
| TCTGGTCCAGAGAAGTATGT+TGG | 0.615382 | 7_2:-1817128 | Msa1043610:CDS |
| CCTGATGGTCATGCACTCTG+TGG | 0.617182 | 7_2:-1815410 | Msa1043610:three_prime_UTR |
| TAAAAGGTGGTCAAGTGGGA+AGG | 0.619386 | 7_2:-1816583 | Msa1043610:CDS |
| GAGATAAGAGAAGAAGAACC+GGG | 0.624058 | 7_2:-1818170 | Msa1043610:CDS |
| AAACAGTCTACCAACAATGG+AGG | 0.626548 | 7_2:-1819989 | Msa1043610:CDS |
| TCTGAATGATGAGGACTGCA+CGG | 0.627361 | 7_2:+1818575 | None:intergenic |
| ATTGCTAAACGTACTATCAG+TGG | 0.628136 | 7_2:+1818433 | None:intergenic |
| GATTTATGAAAGAAATGCAA+AGG | 0.628939 | 7_2:-1818354 | Msa1043610:CDS |
| TGTTGGTGAAACTGACATGA+AGG | 0.630531 | 7_2:-1817810 | Msa1043610:CDS |
| TGAAGTTCGTGATTCTACTG+GGG | 0.631933 | 7_2:-1816937 | Msa1043610:intron |
| ATCAGAAGAAACTTGCAGCA+AGG | 0.633986 | 7_2:+1819362 | None:intergenic |
| AAATGCCAAGCATCTCAAAG+TGG | 0.637894 | 7_2:-1819680 | Msa1043610:CDS |
| TAAGTCACAGAAGGTAGAGG+TGG | 0.639341 | 7_2:-1817513 | Msa1043610:CDS |
| TTCTTGGGATGTAAATCAAG+AGG | 0.643015 | 7_2:-1818480 | Msa1043610:CDS |
| TTTCATAAATCTCTTCATCG+TGG | 0.643783 | 7_2:+1818366 | None:intergenic |
| ACCGGCTGAGAAGACTGCAA+TGG | 0.644940 | 7_2:-1817273 | Msa1043610:CDS |
| GATGTTAAAAGGTGGTCAAG+TGG | 0.645928 | 7_2:-1816588 | Msa1043610:CDS |
| ACAGTGGAGTGACAGACAAG+AGG | 0.647164 | 7_2:-1818922 | Msa1043610:CDS |
| TTTAAGGAAGGCAATAGAAG+AGG | 0.648026 | 7_2:-1819567 | Msa1043610:CDS |
| ATTTGCTGATGCAAGAGAGA+GGG | 0.650221 | 7_2:-1817390 | Msa1043610:CDS |
| TGTGTCAGATGAAGAGATCG+AGG | 0.651842 | 7_2:-1817666 | Msa1043610:CDS |
| GGCAAATTTAGAAGGCCTGT+AGG | 0.651846 | 7_2:-1815329 | Msa1043610:three_prime_UTR |
| TGAGAAGTTGAACAAAACAC+AGG | 0.652092 | 7_2:-1818105 | Msa1043610:intron |
| CACGGTTGACTCAAATTCAG+CGG | 0.655198 | 7_2:-1819609 | Msa1043610:CDS |
| GATACCCTTCAAAGAAGAGG+AGG | 0.656350 | 7_2:-1817609 | Msa1043610:CDS |
| CGGAGCTATTAGACAATGAG+GGG | 0.656874 | 7_2:-1818598 | Msa1043610:CDS |
| TAGGGTGTGTGGCTCCCTCG+AGG | 0.657421 | 7_2:+1818276 | None:intergenic |
| TGCTTGTGAAAATGACCTCG+AGG | 0.659552 | 7_2:-1818291 | Msa1043610:CDS |
| TCAAGCAAATGAGAAAACAC+CGG | 0.660997 | 7_2:-1817291 | Msa1043610:CDS |
| TCATCGACGATTTCCCACCT+AGG | 0.661183 | 7_2:+1818825 | None:intergenic |
| AAGGAAGTGAAGGAAGCCAA+TGG | 0.661589 | 7_2:-1817536 | Msa1043610:CDS |
| TGTGGAGAGAGCAACTGCAG+AGG | 0.665838 | 7_2:-1817222 | Msa1043610:CDS |
| AGCATGGAACAGATTCAACA+TGG | 0.665975 | 7_2:-1815466 | Msa1043610:CDS |
| GCTTGTGAAAATGACCTCGA+GGG | 0.669828 | 7_2:-1818290 | Msa1043610:CDS |
| GAGTGAAAGGAAAGACAACA+AGG | 0.671135 | 7_2:-1818240 | Msa1043610:CDS |
| TCAGAGAATAGGAGAACGTG+TGG | 0.673831 | 7_2:-1816856 | Msa1043610:intron |
| TCATATCATAAAGTTAACCA+AGG | 0.677448 | 7_2:-1820235 | Msa1043610:CDS |
| ATTCAGGCGACACTTGACAG+TGG | 0.679117 | 7_2:-1818938 | Msa1043610:CDS |
| GAAAGTAAGATCAGATATCG+GGG | 0.680548 | 7_2:-1819313 | Msa1043610:CDS |
| GATGTAAAGCTAGGTCCGAG+AGG | 0.681919 | 7_2:-1816881 | Msa1043610:CDS |
| GATGCATGCGAGACTAGCAA+CGG | 0.682120 | 7_2:-1819803 | Msa1043610:CDS |
| GACGAGGGGATAAAAGAAGG+TGG | 0.682852 | 7_2:-1820058 | Msa1043610:CDS |
| ACCGTGTCTTCTAGGTACGT+CGG | 0.684457 | 7_2:+1819626 | None:intergenic |
| AAGTTAACGAGATTAATACA+AGG | 0.686891 | 7_2:-1819407 | Msa1043610:CDS |
| CAATGTCAAGGAAACACTGG+AGG | 0.687778 | 7_2:-1818408 | Msa1043610:CDS |
| CACTGTTTCACTGAGTACAG+GGG | 0.697126 | 7_2:+1817886 | None:intergenic |
| TCGATGCCGATGTTAAAAGG+TGG | 0.697898 | 7_2:-1816596 | Msa1043610:CDS |
| ACCGACGTACCTAGAAGACA+CGG | 0.718058 | 7_2:-1819627 | Msa1043610:CDS |
| TGAAAGGAAAGACAACAAGG+TGG | 0.803777 | 7_2:-1818237 | Msa1043610:CDS |
| GAATGAAGGTGATATCACCG+GGG | 0.814164 | 7_2:+1820282 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGAAAAAAAAAAGA+AGG | + | chr7_2:1818565-1818584 | None:intergenic | 10.0% |
| !! | AATTATTCCTTGATAAATAA+AGG | + | chr7_2:1820357-1820376 | None:intergenic | 15.0% |
| !!! | TACCAGTGTTTTTAATATAA+GGG | + | chr7_2:1816433-1816452 | None:intergenic | 20.0% |
| !! | AAAAATAAATATGACAAGTC+TGG | - | chr7_2:1818421-1818440 | Msa1043610:CDS | 20.0% |
| !! | TCAAGAAATAACAATCTAAA+AGG | + | chr7_2:1819108-1819127 | None:intergenic | 20.0% |
| !!! | ATTTTCATGTTGTTTAATGA+TGG | + | chr7_2:1819776-1819795 | None:intergenic | 20.0% |
| !! | TCATTAAACAACATGAAAAT+TGG | - | chr7_2:1819776-1819795 | Msa1043610:CDS | 20.0% |
| !!! | TGATAAATGTTTTCCATTTT+TGG | + | chr7_2:1819836-1819855 | None:intergenic | 20.0% |
| !!! | TTTTTCTCTCTAAACTTAAA+CGG | - | chr7_2:1819924-1819943 | Msa1043610:CDS | 20.0% |
| !!! | TTATTTTAATTGATGTCTTC+AGG | - | chr7_2:1820077-1820096 | Msa1043610:CDS | 20.0% |
| !!! | CTTTTTTTTTGGAAAAAATG+TGG | + | chr7_2:1820313-1820332 | None:intergenic | 20.0% |
| !!! | ATAGACAACAACTTTTTTTT+TGG | + | chr7_2:1820324-1820343 | None:intergenic | 20.0% |
| !!! | AAATAAGCCTTTATTTATCA+AGG | - | chr7_2:1820347-1820366 | Msa1043610:CDS | 20.0% |
| !! | ATATGACATATTGATCGTTT+TGG | + | chr7_2:1815318-1815337 | None:intergenic | 25.0% |
| ! | TCATATCATAAAGTTAACCA+AGG | - | chr7_2:1815332-1815351 | Msa1043610:three_prime_UTR | 25.0% |
| !! | GATATGTTTTATGATGAAGA+AGG | - | chr7_2:1815629-1815648 | Msa1043610:intron | 25.0% |
| ! | ATAAAACATATCAACAGAGT+CGG | + | chr7_2:1815621-1815640 | None:intergenic | 25.0% |
| ! | TTATCCAAATTATCTGTTAC+AGG | + | chr7_2:1815830-1815849 | None:intergenic | 25.0% |
| ! | ATTTGAAAGTCAGGAAAAAA+AGG | - | chr7_2:1816110-1816129 | Msa1043610:intron | 25.0% |
| ! | AAGTTAACGAGATTAATACA+AGG | - | chr7_2:1816160-1816179 | Msa1043610:intron | 25.0% |
| ! | ATTAATACAAGGCAAACATT+TGG | - | chr7_2:1816171-1816190 | Msa1043610:intron | 25.0% |
| !! | GAAAAATTTTGAGCTTAAAG+AGG | - | chr7_2:1816388-1816407 | Msa1043610:intron | 25.0% |
| !!! | CTACCAGTGTTTTTAATATA+AGG | + | chr7_2:1816434-1816453 | None:intergenic | 25.0% |
| ! | CTTATATTAAAAACACTGGT+AGG | - | chr7_2:1816432-1816451 | Msa1043610:intron | 25.0% |
| ! | ATCTGATCATACAATTGAAA+TGG | - | chr7_2:1816478-1816497 | Msa1043610:intron | 25.0% |
| ! | TCATACAATTGAAATGGTTA+AGG | - | chr7_2:1816484-1816503 | Msa1043610:intron | 25.0% |
| ! | TTGAAATGGTTAAGGAATAT+TGG | - | chr7_2:1816492-1816511 | Msa1043610:intron | 25.0% |
| ! | TGAAATGGTTAAGGAATATT+GGG | - | chr7_2:1816493-1816512 | Msa1043610:intron | 25.0% |
| !! | ATGGGAAAGAAAAAAAGTAT+TGG | - | chr7_2:1816764-1816783 | Msa1043610:intron | 25.0% |
| ! | AAGATGGTAAAAAGACTAAA+TGG | - | chr7_2:1816798-1816817 | Msa1043610:intron | 25.0% |
| !!! | GAATAGCTCTCAATATTTTT+TGG | + | chr7_2:1816844-1816863 | None:intergenic | 25.0% |
| ! | AAAAATATTGAGAGCTATTC+AGG | - | chr7_2:1816844-1816863 | Msa1043610:intron | 25.0% |
| ! | CTTATTAATTCTGAATGATG+AGG | + | chr7_2:1817004-1817023 | None:intergenic | 25.0% |
| ! | TCATTCAGAATTAATAAGCA+TGG | - | chr7_2:1817006-1817025 | Msa1043610:intron | 25.0% |
| ! | GATTTATGAAAGAAATGCAA+AGG | - | chr7_2:1817213-1817232 | Msa1043610:CDS | 25.0% |
| ! | TCAAACTGATCTAATTTATG+AGG | - | chr7_2:1817375-1817394 | Msa1043610:CDS | 25.0% |
| !! | ATACATATTTCTATAGACTC+AGG | + | chr7_2:1817860-1817879 | None:intergenic | 25.0% |
| ! | TGAGTCTATAGAAATATGTA+TGG | - | chr7_2:1817859-1817878 | Msa1043610:CDS | 25.0% |
| ! | AAAGAATAGAGAAAGAGAAA+AGG | - | chr7_2:1818108-1818127 | Msa1043610:CDS | 25.0% |
| !! | GTCAAAAGAACATTTTGAAT+GGG | - | chr7_2:1818230-1818249 | Msa1043610:CDS | 25.0% |
| ! | CCAATATGTACAAAAAACAT+GGG | + | chr7_2:1818754-1818773 | None:intergenic | 25.0% |
| ! | ACCAATATGTACAAAAAACA+TGG | + | chr7_2:1818755-1818774 | None:intergenic | 25.0% |
| ! | GAATATTGTGTTAGACAAAA+TGG | + | chr7_2:1818925-1818944 | None:intergenic | 25.0% |
| ! | ATCAGAGGTTATATTCTAAA+AGG | + | chr7_2:1819075-1819094 | None:intergenic | 25.0% |
| ! | AGAAATAACAATCTAAAAGG+AGG | + | chr7_2:1819105-1819124 | None:intergenic | 25.0% |
| ! | TTGATATATTGCATATGAAC+TGG | - | chr7_2:1819124-1819143 | Msa1043610:intron | 25.0% |
| ! | AACAATAAAGGAAAAATCCA+TGG | + | chr7_2:1819150-1819169 | None:intergenic | 25.0% |
| ! | GAAAGCTTCATTAACAATAA+AGG | + | chr7_2:1819162-1819181 | None:intergenic | 25.0% |
| ! | AAGGTAGTAGTATAAAGTAA+AGG | + | chr7_2:1819482-1819501 | None:intergenic | 25.0% |
| ! | TGCTATTGACAAAACTAAAA+AGG | + | chr7_2:1819506-1819525 | None:intergenic | 25.0% |
| !! | TTGGTAGATCTATTTTACTT+GGG | - | chr7_2:1819530-1819549 | Msa1043610:intron | 25.0% |
| !! | TTTTCTCTCTAAACTTAAAC+GGG | - | chr7_2:1819925-1819944 | Msa1043610:CDS | 25.0% |
| ! | GGGTTAATATATGTTGTATT+CGG | - | chr7_2:1819945-1819964 | Msa1043610:CDS | 25.0% |
| ! | GGTTAATATATGTTGTATTC+GGG | - | chr7_2:1819946-1819965 | Msa1043610:CDS | 25.0% |
| AGATCGTGTTAATTCTTCAA+AGG | - | chr7_2:1815258-1815277 | Msa1043610:three_prime_UTR | 30.0% | |
| GAAGTGAAAATGGAACAAAT+GGG | - | chr7_2:1815354-1815373 | Msa1043610:three_prime_UTR | 30.0% | |
| CAATTAAACAAGTGTAAGCA+GGG | + | chr7_2:1815409-1815428 | None:intergenic | 30.0% | |
| TCAATTAAACAAGTGTAAGC+AGG | + | chr7_2:1815410-1815429 | None:intergenic | 30.0% | |
| ! | ATGTTTTATGATGAAGAAGG+TGG | - | chr7_2:1815632-1815651 | Msa1043610:intron | 30.0% |
| ! | GACTGTTTCTTGACATTATT+AGG | + | chr7_2:1815566-1815585 | None:intergenic | 30.0% |
| AAGAAACAGTCTTTCAACAA+TGG | - | chr7_2:1815698-1815717 | Msa1043610:intron | 30.0% | |
| AGAGGCTCAAATGAAAATAA+AGG | - | chr7_2:1816018-1816037 | Msa1043610:intron | 30.0% | |
| TCAATGAGAAGAAAGAAAGA+AGG | - | chr7_2:1816052-1816071 | Msa1043610:intron | 30.0% | |
| CTAGTATCAATTTGAAAGTC+AGG | - | chr7_2:1816101-1816120 | Msa1043610:intron | 30.0% | |
| GAGAAAGTAAGATCAGATAT+CGG | - | chr7_2:1816252-1816271 | Msa1043610:intron | 30.0% | |
| AGAAAGTAAGATCAGATATC+GGG | - | chr7_2:1816253-1816272 | Msa1043610:intron | 30.0% | |
| ! | GGAGACAATTTCAATTTGTT+CGG | + | chr7_2:1816321-1816340 | None:intergenic | 30.0% |
| GACCCTTATATTAAAAACAC+TGG | - | chr7_2:1816428-1816447 | Msa1043610:intron | 30.0% | |
| ATTGTATGATCAGATTCTTC+AGG | + | chr7_2:1816473-1816492 | None:intergenic | 30.0% | |
| !! | GACACTTTTGTTTAGTTTCA+TGG | + | chr7_2:1816583-1816602 | None:intergenic | 30.0% |
| !! | TTAGTCTTTTTACCATCTTC+TGG | + | chr7_2:1816797-1816816 | None:intergenic | 30.0% |
| AAGTGAGAATAAAGTTGAAG+TGG | - | chr7_2:1816910-1816929 | Msa1043610:CDS | 30.0% | |
| GTTTAGAAGACAAAAAGAGA+AGG | - | chr7_2:1817053-1817072 | Msa1043610:intron | 30.0% | |
| GTTTAGCAATATCAATGTCA+AGG | - | chr7_2:1817147-1817166 | Msa1043610:CDS | 30.0% | |
| TTTCATAAATCTCTTCATCG+TGG | + | chr7_2:1817204-1817223 | None:intergenic | 30.0% | |
| GTGATTTAAATGGAAATGTG+AGG | - | chr7_2:1817239-1817258 | Msa1043610:CDS | 30.0% | |
| TTAGTAACTTGAACAGATTC+TGG | + | chr7_2:1817611-1817630 | None:intergenic | 30.0% | |
| ATTTGTGGAATCATTGTCAA+TGG | + | chr7_2:1817738-1817757 | None:intergenic | 30.0% | |
| AGAAATATGTATGGATGCAA+AGG | - | chr7_2:1817868-1817887 | Msa1043610:CDS | 30.0% | |
| ATCAATTCCCAGCAAAATAA+AGG | - | chr7_2:1817985-1818004 | Msa1043610:intron | 30.0% | |
| ! | CGTCAAAAGAACATTTTGAA+TGG | - | chr7_2:1818229-1818248 | Msa1043610:CDS | 30.0% |
| ! | CATAGCTGAAAGATTTTGAA+TGG | + | chr7_2:1818498-1818517 | None:intergenic | 30.0% |
| CATTCAAAATCTTTCAGCTA+TGG | - | chr7_2:1818496-1818515 | Msa1043610:CDS | 30.0% | |
| !!! | CCCATGTTTTTTGTACATAT+TGG | - | chr7_2:1818751-1818770 | Msa1043610:CDS | 30.0% |
| ! | AGAGGTTATATTCTAAAAGG+AGG | + | chr7_2:1819072-1819091 | None:intergenic | 30.0% |
| TCATTAAATACGCCAAATAC+TGG | - | chr7_2:1819433-1819452 | Msa1043610:CDS | 30.0% | |
| CATTAAATACGCCAAATACT+GGG | - | chr7_2:1819434-1819453 | Msa1043610:CDS | 30.0% | |
| ! | TTTAAAGCAAACCCAGTATT+TGG | + | chr7_2:1819448-1819467 | None:intergenic | 30.0% |
| TTGACAAAACTAAAAAGGCA+AGG | + | chr7_2:1819501-1819520 | None:intergenic | 30.0% | |
| ! | GTTTTGTCAATAGCATTTCT+TGG | - | chr7_2:1819511-1819530 | Msa1043610:intron | 30.0% |
| ! | CTTGGTAGATCTATTTTACT+TGG | - | chr7_2:1819529-1819548 | Msa1043610:intron | 30.0% |
| ! | ACTATTGCTGTTAAAGGAAT+TGG | + | chr7_2:1819611-1819630 | None:intergenic | 30.0% |
| ! | GAAGGTTTTTGATCTTCTAA+AGG | - | chr7_2:1819736-1819755 | Msa1043610:CDS | 30.0% |
| ! | TTTGATCTTCTAAAGGTTTG+TGG | - | chr7_2:1819743-1819762 | Msa1043610:CDS | 30.0% |
| !! | TTCCATTTTTGGAGAAAGAA+CGG | + | chr7_2:1819825-1819844 | None:intergenic | 30.0% |
| ATCAATAGCATAACTCGTTA+AGG | + | chr7_2:1819865-1819884 | None:intergenic | 30.0% | |
| AATTTCAACCTCAATCACAA+TGG | - | chr7_2:1819890-1819909 | Msa1043610:CDS | 30.0% | |
| ATATATGTTGTATTCGGGAT+TGG | - | chr7_2:1819951-1819970 | Msa1043610:CDS | 30.0% | |
| TATATGTTGTATTCGGGATT+GGG | - | chr7_2:1819952-1819971 | Msa1043610:CDS | 30.0% | |
| ! | AAAGGTCACTTTCAAACATA+AGG | + | chr7_2:1820000-1820019 | None:intergenic | 30.0% |
| !! | AGTGACCTTTTGAAAAATAC+AGG | - | chr7_2:1820010-1820029 | Msa1043610:CDS | 30.0% |
| !! | GTGACCTTTTGAAAAATACA+GGG | - | chr7_2:1820011-1820030 | Msa1043610:CDS | 30.0% |
| !! | CTTACCCTGTATTTTTCAAA+AGG | + | chr7_2:1820018-1820037 | None:intergenic | 30.0% |
| !! | TGAGCTTACTTTTCATTGAA+CGG | + | chr7_2:1820203-1820222 | None:intergenic | 30.0% |
| ATGAAGTAGGCAAATTTAGA+AGG | - | chr7_2:1820230-1820249 | Msa1043610:CDS | 30.0% | |
| ! | AATTGATTGTTTTCACCTAC+AGG | + | chr7_2:1820256-1820275 | None:intergenic | 30.0% |
| TATAGGAGCAAAGTCAAAAG+TGG | - | chr7_2:1815217-1815236 | Msa1043610:three_prime_UTR | 35.0% | |
| AATTCTTCAAAGGAAATCCC+CGG | - | chr7_2:1815268-1815287 | Msa1043610:three_prime_UTR | 35.0% | |
| TTGAATGAAGGTGATATCAC+CGG | + | chr7_2:1815290-1815309 | None:intergenic | 35.0% | |
| GTGATATCACCTTCATTCAA+TGG | - | chr7_2:1815290-1815309 | Msa1043610:three_prime_UTR | 35.0% | |
| GTTAACCAAGGAAGTGAAAA+TGG | - | chr7_2:1815344-1815363 | Msa1043610:three_prime_UTR | 35.0% | |
| ! | TTGTTCCATTTTCACTTCCT+TGG | + | chr7_2:1815352-1815371 | None:intergenic | 35.0% |
| GGAAGTGAAAATGGAACAAA+TGG | - | chr7_2:1815353-1815372 | Msa1043610:three_prime_UTR | 35.0% | |
| AAGAAACAGTCTACCAACAA+TGG | - | chr7_2:1815575-1815594 | Msa1043610:intron | 35.0% | |
| TGACATTATTAGGTGAAGCA+TGG | + | chr7_2:1815679-1815698 | None:intergenic | 35.0% | |
| AAACAGTCTTTCAACAATGG+AGG | - | chr7_2:1815701-1815720 | Msa1043610:intron | 35.0% | |
| AACAGTCTTTCAACAATGGA+GGG | - | chr7_2:1815702-1815721 | Msa1043610:intron | 35.0% | |
| ACAGCCTGTAACAGATAATT+TGG | - | chr7_2:1815823-1815842 | Msa1043610:intron | 35.0% | |
| CATTGATACTTCGAGATCAA+CGG | - | chr7_2:1815859-1815878 | Msa1043610:CDS | 35.0% | |
| TTTAAGGAAGGCAATAGAAG+AGG | - | chr7_2:1816000-1816019 | Msa1043610:intron | 35.0% | |
| AAGGCAAACATTTGGAGAAA+TGG | - | chr7_2:1816179-1816198 | Msa1043610:intron | 35.0% | |
| CTTACTTTCTCTGTTCTCAT+TGG | + | chr7_2:1816243-1816262 | None:intergenic | 35.0% | |
| GAAAGTAAGATCAGATATCG+GGG | - | chr7_2:1816254-1816273 | Msa1043610:intron | 35.0% | |
| ATTGTCTCCAGACAAACATA+AGG | - | chr7_2:1816332-1816351 | Msa1043610:intron | 35.0% | |
| ! | AATTTTGAGCTTAAAGAGGC+AGG | - | chr7_2:1816392-1816411 | Msa1043610:intron | 35.0% |
| !! | AGATTCTTCAGGTTTTTCAG+TGG | + | chr7_2:1816462-1816481 | None:intergenic | 35.0% |
| GCAGTTAATGAAGCAAGTTA+TGG | - | chr7_2:1816545-1816564 | Msa1043610:CDS | 35.0% | |
| AGTTGAAGAAGTTGAGAACA+AGG | - | chr7_2:1816682-1816701 | Msa1043610:intron | 35.0% | |
| ACACCGTTTAATGAACCAAA+AGG | - | chr7_2:1816707-1816726 | Msa1043610:CDS | 35.0% | |
| !!! | GAGCCTTTTGGTTCATTAAA+CGG | + | chr7_2:1816713-1816732 | None:intergenic | 35.0% |
| ! | AGGTTAATTACAGAGCCTTT+TGG | + | chr7_2:1816725-1816744 | None:intergenic | 35.0% |
| AAAGGCTCTGTAATTAACCT+AGG | - | chr7_2:1816725-1816744 | Msa1043610:CDS | 35.0% | |
| AAAAAGAGAAGGAATGCATC+TGG | - | chr7_2:1817064-1817083 | Msa1043610:intron | 35.0% | |
| TTCTTGGGATGTAAATCAAG+AGG | - | chr7_2:1817087-1817106 | Msa1043610:CDS | 35.0% | |
| AAGAGGTAGAACATTCCTAT+TGG | - | chr7_2:1817104-1817123 | Msa1043610:CDS | 35.0% | |
| ATTGCTAAACGTACTATCAG+TGG | + | chr7_2:1817137-1817156 | None:intergenic | 35.0% | |
| TATCAATGTCAAGGAAACAC+TGG | - | chr7_2:1817156-1817175 | Msa1043610:CDS | 35.0% | |
| GCAAAGGCTAGTGATTTAAA+TGG | - | chr7_2:1817229-1817248 | Msa1043610:CDS | 35.0% | |
| TTCAACTTCTCAGTTTCATC+TGG | + | chr7_2:1817454-1817473 | None:intergenic | 35.0% | |
| TGAGAAGTTGAACAAAACAC+AGG | - | chr7_2:1817462-1817481 | Msa1043610:CDS | 35.0% | |
| TGATCTGCAGGATGATATAA+TGG | - | chr7_2:1817544-1817563 | Msa1043610:CDS | 35.0% | |
| GACAATGATTCCACAAATGT+TGG | - | chr7_2:1817740-1817759 | Msa1043610:CDS | 35.0% | |
| AATATGTATGGATGCAAAGG+AGG | - | chr7_2:1817871-1817890 | Msa1043610:CDS | 35.0% | |
| !!! | TGACTCTCCTTTATTTTGCT+GGG | + | chr7_2:1817995-1818014 | None:intergenic | 35.0% |
| !!! | ATGACTCTCCTTTATTTTGC+TGG | + | chr7_2:1817996-1818015 | None:intergenic | 35.0% |
| TTTCTCATTTGCTTGACAAG+TGG | + | chr7_2:1818272-1818291 | None:intergenic | 35.0% | |
| TCAAGCAAATGAGAAAACAC+CGG | - | chr7_2:1818276-1818295 | Msa1043610:CDS | 35.0% | |
| AGCAATGGAACAAAGCAAAA+CGG | - | chr7_2:1818472-1818491 | Msa1043610:CDS | 35.0% | |
| TCAAAATCTTTCAGCTATGG+TGG | - | chr7_2:1818499-1818518 | Msa1043610:CDS | 35.0% | |
| AGTTCCACTTTACCTGATAT+CGG | - | chr7_2:1818537-1818556 | Msa1043610:CDS | 35.0% | |
| !! | AAAAAGAAGGTACCGATATC+AGG | + | chr7_2:1818552-1818571 | None:intergenic | 35.0% |
| CAAAAAACATGGGCAAAACA+AGG | + | chr7_2:1818744-1818763 | None:intergenic | 35.0% | |
| TAACGTAGAACAGTGATTGT+TGG | + | chr7_2:1818795-1818814 | None:intergenic | 35.0% | |
| ! | ACTTGACCACCTTTTAACAT+CGG | + | chr7_2:1818980-1818999 | None:intergenic | 35.0% |
| ATGTTAAAAGGTGGTCAAGT+GGG | - | chr7_2:1818980-1818999 | Msa1043610:CDS | 35.0% | |
| ! | AAAGGAGGTATATTCATCAG+AGG | + | chr7_2:1819090-1819109 | None:intergenic | 35.0% |
| AAGCTTTCCTTGTAAACTTC+AGG | - | chr7_2:1819174-1819193 | Msa1043610:CDS | 35.0% | |
| AGCTTTCCTTGTAAACTTCA+GGG | - | chr7_2:1819175-1819194 | Msa1043610:CDS | 35.0% | |
| TATCTGTGGAGTCTATAACT+TGG | - | chr7_2:1819273-1819292 | Msa1043610:CDS | 35.0% | |
| AGTCTATAACTTGGCTGATA+TGG | - | chr7_2:1819282-1819301 | Msa1043610:CDS | 35.0% | |
| ! | GTGGTTACTATTGCTGTTAA+AGG | + | chr7_2:1819617-1819636 | None:intergenic | 35.0% |
| TAAGAGAACCATTGTGATTG+AGG | + | chr7_2:1819901-1819920 | None:intergenic | 35.0% | |
| TGGGATCAATTTGACTAACA+TGG | - | chr7_2:1819971-1819990 | Msa1043610:CDS | 35.0% | |
| ACAGATTCAACATGGAAGAA+AGG | - | chr7_2:1820109-1820128 | Msa1043610:CDS | 35.0% | |
| ATGTTAATTGTGCTTCCTGA+TGG | - | chr7_2:1820142-1820161 | Msa1043610:CDS | 35.0% | |
| AGCTCATGTTTGTATGAAGT+AGG | - | chr7_2:1820217-1820236 | Msa1043610:CDS | 35.0% | |
| TGAATGAAGGTGATATCACC+GGG | + | chr7_2:1815289-1815308 | None:intergenic | 40.0% | |
| !!! | GTTTTGGCTCCATTGAATGA+AGG | + | chr7_2:1815302-1815321 | None:intergenic | 40.0% |
| TAAAGACGAGCAGAGCTAAA+TGG | - | chr7_2:1815444-1815463 | Msa1043610:exon | 40.0% | |
| TTCTGGTATTCATTGTGACG+AGG | - | chr7_2:1815493-1815512 | Msa1043610:intron | 40.0% | |
| TCTGGTATTCATTGTGACGA+GGG | - | chr7_2:1815494-1815513 | Msa1043610:intron | 40.0% | |
| AAACAGTCTACCAACAATGG+AGG | - | chr7_2:1815578-1815597 | Msa1043610:intron | 40.0% | |
| AACAGTCTACCAACAATGGA+GGG | - | chr7_2:1815579-1815598 | Msa1043610:intron | 40.0% | |
| TATAGCTTTCCCTCCATTGT+TGG | + | chr7_2:1815591-1815610 | None:intergenic | 40.0% | |
| TTATCTGTTACAGGCTGTGA+AGG | + | chr7_2:1815821-1815840 | None:intergenic | 40.0% | |
| !! | ACTTTGAGATGCTTGGCATT+TGG | + | chr7_2:1815888-1815907 | None:intergenic | 40.0% |
| AAATGCCAAGCATCTCAAAG+TGG | - | chr7_2:1815887-1815906 | Msa1043610:CDS | 40.0% | |
| !! | TTCTGTAGCTGCTTTAAGGA+AGG | - | chr7_2:1815988-1816007 | Msa1043610:CDS | 40.0% |
| GACTTCTGTTTGACATGATC+AGG | + | chr7_2:1816082-1816101 | None:intergenic | 40.0% | |
| ATCAGAAGAAACTTGCAGCA+AGG | + | chr7_2:1816208-1816227 | None:intergenic | 40.0% | |
| CTGCAAGTTTCTTCTGATGT+AGG | - | chr7_2:1816210-1816229 | Msa1043610:intron | 40.0% | |
| !! | TTTGTTCGGTGCTTCTTGTA+CGG | + | chr7_2:1816307-1816326 | None:intergenic | 40.0% |
| TCCAGACAAACATAAGGAAG+AGG | - | chr7_2:1816338-1816357 | Msa1043610:intron | 40.0% | |
| ACCTCTTCCTTATGTTTGTC+TGG | + | chr7_2:1816342-1816361 | None:intergenic | 40.0% | |
| CTGAAAGAAGCAGATCATGA+AGG | - | chr7_2:1816366-1816385 | Msa1043610:intron | 40.0% | |
| !! | CAAAAGTGTCAAGAAGTTGC+TGG | - | chr7_2:1816593-1816612 | Msa1043610:CDS | 40.0% |
| TGGTGAAACAAACCTGATTC+AGG | - | chr7_2:1816613-1816632 | Msa1043610:CDS | 40.0% | |
| GCTCTGTAATTAACCTAGGT+GGG | - | chr7_2:1816729-1816748 | Msa1043610:CDS | 40.0% | |
| ATTGGCTATAAGCCAGAAGA+TGG | - | chr7_2:1816782-1816801 | Msa1043610:intron | 40.0% | |
| GACTAAATGGTCCATTGATC+AGG | - | chr7_2:1816811-1816830 | Msa1043610:intron | 40.0% | |
| TTGGCATTCTTCCTGATCAA+TGG | + | chr7_2:1816825-1816844 | None:intergenic | 40.0% | |
| TTGAGAGCTATTCAGGAACT+TGG | - | chr7_2:1816851-1816870 | Msa1043610:intron | 40.0% | |
| GCTATTCAGGAACTTGGAAA+TGG | - | chr7_2:1816857-1816876 | Msa1043610:CDS | 40.0% | |
| ATGTGAATTGACAGAGTCTC+CGG | - | chr7_2:1816949-1816968 | Msa1043610:intron | 40.0% | |
| !! | AAGGAATGCATCTGGTTCTT+GGG | - | chr7_2:1817072-1817091 | Msa1043610:CDS | 40.0% |
| TCTCTTCATCGTGGTGAATA+TGG | + | chr7_2:1817195-1817214 | None:intergenic | 40.0% | |
| !! | GAGGTCATTTTCACAAGCAT+GGG | + | chr7_2:1817275-1817294 | None:intergenic | 40.0% |
| ! | ATTTTCTTCCATAGGGTGTG+TGG | + | chr7_2:1817305-1817324 | None:intergenic | 40.0% |
| ! | CACTCGCATTTTCTTCCATA+GGG | + | chr7_2:1817312-1817331 | None:intergenic | 40.0% |
| ! | TCACTCGCATTTTCTTCCAT+AGG | + | chr7_2:1817313-1817332 | None:intergenic | 40.0% |
| TGGAAGAAAATGCGAGTGAA+AGG | - | chr7_2:1817314-1817333 | Msa1043610:CDS | 40.0% | |
| GAGTGAAAGGAAAGACAACA+AGG | - | chr7_2:1817327-1817346 | Msa1043610:CDS | 40.0% | |
| TGAAAGGAAAGACAACAAGG+TGG | - | chr7_2:1817330-1817349 | Msa1043610:CDS | 40.0% | |
| GGAGATAAGAGAAGAAGAAC+CGG | - | chr7_2:1817396-1817415 | Msa1043610:CDS | 40.0% | |
| GAGATAAGAGAAGAAGAACC+GGG | - | chr7_2:1817397-1817416 | Msa1043610:CDS | 40.0% | |
| ATAGCTAGAACTGGATTCTG+AGG | + | chr7_2:1817428-1817447 | None:intergenic | 40.0% | |
| ! | ATCTGGTTCATAGCTAGAAC+TGG | + | chr7_2:1817437-1817456 | None:intergenic | 40.0% |
| GCAGATCACATGAAAAACTC+TGG | + | chr7_2:1817532-1817551 | None:intergenic | 40.0% | |
| ! | GAGTTTTTCATGTGATCTGC+AGG | - | chr7_2:1817532-1817551 | Msa1043610:CDS | 40.0% |
| CAGGATGATATAATGGTCAC+AGG | - | chr7_2:1817551-1817570 | Msa1043610:CDS | 40.0% | |
| CTTCATCAAAGTCAGAAGTC+TGG | + | chr7_2:1817658-1817677 | None:intergenic | 40.0% | |
| CAGACTTCTGACTTTGATGA+AGG | - | chr7_2:1817656-1817675 | Msa1043610:CDS | 40.0% | |
| ACACTGTTTCACTGAGTACA+GGG | + | chr7_2:1817685-1817704 | None:intergenic | 40.0% | |
| TACACTGTTTCACTGAGTAC+AGG | + | chr7_2:1817686-1817705 | None:intergenic | 40.0% | |
| GTCAGTTTCACCAACATTTG+TGG | + | chr7_2:1817753-1817772 | None:intergenic | 40.0% | |
| ! | TGTTGGTGAAACTGACATGA+AGG | - | chr7_2:1817757-1817776 | Msa1043610:CDS | 40.0% |
| GTGAAACTGACATGAAGGTT+AGG | - | chr7_2:1817762-1817781 | Msa1043610:CDS | 40.0% | |
| GCAAAACCAAGATCAGTGTT+TGG | - | chr7_2:1817784-1817803 | Msa1043610:CDS | 40.0% | |
| ! | CCTTTTCCAAACACTGATCT+TGG | + | chr7_2:1817793-1817812 | None:intergenic | 40.0% |
| CCAAGATCAGTGTTTGGAAA+AGG | - | chr7_2:1817790-1817809 | Msa1043610:CDS | 40.0% | |
| TCAGATACCCTTCAAAGAAG+AGG | - | chr7_2:1817955-1817974 | Msa1043610:intron | 40.0% | |
| TTCACCTCCTCTTCTTTGAA+GGG | + | chr7_2:1817965-1817984 | None:intergenic | 40.0% | |
| TTTCACCTCCTCTTCTTTGA+AGG | + | chr7_2:1817966-1817985 | None:intergenic | 40.0% | |
| TCATCAAACATCCGTGACAA+AGG | - | chr7_2:1818012-1818031 | Msa1043610:intron | 40.0% | |
| TTCCTTCACTTCCTTTGTCA+CGG | + | chr7_2:1818026-1818045 | None:intergenic | 40.0% | |
| TACCTTCTGTGACTTACCAT+TGG | + | chr7_2:1818050-1818069 | None:intergenic | 40.0% | |
| AATTCGTGAAGCTCGTGAAA+GGG | - | chr7_2:1818153-1818172 | Msa1043610:CDS | 40.0% | |
| ! | ATTTGCTGATGCAAGAGAGA+GGG | - | chr7_2:1818177-1818196 | Msa1043610:CDS | 40.0% |
| ! | ACATTTTGAATGGGCGAGAA+AGG | - | chr7_2:1818239-1818258 | Msa1043610:CDS | 40.0% |
| ! | TTGCTTTGTTCCATTGCTTC+TGG | + | chr7_2:1818470-1818489 | None:intergenic | 40.0% |
| ! | TCTGAAGTTCGTGATTCTAC+TGG | - | chr7_2:1818628-1818647 | Msa1043610:CDS | 40.0% |
| CTGAAGTTCGTGATTCTACT+GGG | - | chr7_2:1818629-1818648 | Msa1043610:CDS | 40.0% | |
| TGAAGTTCGTGATTCTACTG+GGG | - | chr7_2:1818630-1818649 | Msa1043610:CDS | 40.0% | |
| ATCACTGTTCTACGTTATGC+AGG | - | chr7_2:1818798-1818817 | Msa1043610:CDS | 40.0% | |
| ! | TCGATCACGCATACTCTTTT+CGG | + | chr7_2:1818836-1818855 | None:intergenic | 40.0% |
| ACAATATTCGTTCCTGCAGA+GGG | - | chr7_2:1818936-1818955 | Msa1043610:CDS | 40.0% | |
| GATGTTAAAAGGTGGTCAAG+TGG | - | chr7_2:1818979-1818998 | Msa1043610:CDS | 40.0% | |
| TATTGCATATGAACTGGCCA+TGG | - | chr7_2:1819130-1819149 | Msa1043610:intron | 40.0% | |
| GCTTTCCTTGTAAACTTCAG+GGG | - | chr7_2:1819176-1819195 | Msa1043610:CDS | 40.0% | |
| TTACTCCCCTGAAGTTTACA+AGG | + | chr7_2:1819184-1819203 | None:intergenic | 40.0% | |
| TTCGAGACTCGAATGAACAA+TGG | - | chr7_2:1819231-1819250 | Msa1043610:CDS | 40.0% | |
| TCGAGACTCGAATGAACAAT+GGG | - | chr7_2:1819232-1819251 | Msa1043610:CDS | 40.0% | |
| TAGACTCCACAGATAAGCAA+GGG | + | chr7_2:1819268-1819287 | None:intergenic | 40.0% | |
| ATAGACTCCACAGATAAGCA+AGG | + | chr7_2:1819269-1819288 | None:intergenic | 40.0% | |
| ACTTGAATTTCGCAGATCCT+TGG | - | chr7_2:1819566-1819585 | Msa1043610:CDS | 40.0% | |
| CTTGAATTTCGCAGATCCTT+GGG | - | chr7_2:1819567-1819586 | Msa1043610:CDS | 40.0% | |
| AATTGGTTGCCAACCACTAT+CGG | + | chr7_2:1819594-1819613 | None:intergenic | 40.0% | |
| AGCTTTCTTTACATCAGGTG+TGG | + | chr7_2:1819636-1819655 | None:intergenic | 40.0% | |
| CGGTAAGCTTTCTTTACATC+AGG | + | chr7_2:1819641-1819660 | None:intergenic | 40.0% | |
| ! | GCAAAAGTACACTTGTGAGA+AGG | - | chr7_2:1819718-1819737 | Msa1043610:CDS | 40.0% |
| TTGGAGAAAGAACGGTCAAT+GGG | + | chr7_2:1819817-1819836 | None:intergenic | 40.0% | |
| TTTGGAGAAAGAACGGTCAA+TGG | + | chr7_2:1819818-1819837 | None:intergenic | 40.0% | |
| GACCGTTCTTTCTCCAAAAA+TGG | - | chr7_2:1819820-1819839 | Msa1043610:CDS | 40.0% | |
| ATTGATGTCTTCAGGAAGCA+TGG | - | chr7_2:1820085-1820104 | Msa1043610:CDS | 40.0% | |
| AGCATGGAACAGATTCAACA+TGG | - | chr7_2:1820101-1820120 | Msa1043610:CDS | 40.0% | |
| GAATGAAGGTGATATCACCG+GGG | + | chr7_2:1815288-1815307 | None:intergenic | 45.0% | |
| ATGGTCTATACCAGCAGCAA+AGG | - | chr7_2:1815463-1815482 | Msa1043610:CDS | 45.0% | |
| !! | GAAAAAGCATCCTTTGCTGC+TGG | + | chr7_2:1815476-1815495 | None:intergenic | 45.0% |
| !!! | GCAGCAAAGGATGCTTTTTC+TGG | - | chr7_2:1815476-1815495 | Msa1043610:intron | 45.0% |
| CTGGTATTCATTGTGACGAG+GGG | - | chr7_2:1815495-1815514 | Msa1043610:intron | 45.0% | |
| TGTGACGAGGGGATAAAAGA+AGG | - | chr7_2:1815506-1815525 | Msa1043610:intron | 45.0% | |
| !! | ATGTGCCACTTTGAGATGCT+TGG | + | chr7_2:1815895-1815914 | None:intergenic | 45.0% |
| TTCTAGGTACGTCGGTGAAT+CGG | + | chr7_2:1815936-1815955 | None:intergenic | 45.0% | |
| TTGAGTCAACCGTGTCTTCT+AGG | + | chr7_2:1815952-1815971 | None:intergenic | 45.0% | |
| ! | CACGGTTGACTCAAATTCAG+CGG | - | chr7_2:1815958-1815977 | Msa1043610:CDS | 45.0% |
| ! | CAGCTTCTGTAGCTGCTTTA+AGG | - | chr7_2:1815984-1816003 | Msa1043610:CDS | 45.0% |
| GGTTAAGGAATATTGGGAGC+AGG | - | chr7_2:1816499-1816518 | Msa1043610:intron | 45.0% | |
| GAATATTGGGAGCAGGAGAA+TGG | - | chr7_2:1816506-1816525 | Msa1043610:intron | 45.0% | |
| GCAGGAGAATGGTGAAGAAA+AGG | - | chr7_2:1816517-1816536 | Msa1043610:intron | 45.0% | |
| AGTGACAGACAAGAGGTTGA+AGG | - | chr7_2:1816652-1816671 | Msa1043610:intron | 45.0% | |
| GGCTCTGTAATTAACCTAGG+TGG | - | chr7_2:1816728-1816747 | Msa1043610:CDS | 45.0% | |
| TCCGGAGCTATTAGACAATG+AGG | - | chr7_2:1816967-1816986 | Msa1043610:intron | 45.0% | |
| CCCTCATTGTCTAATAGCTC+CGG | + | chr7_2:1816971-1816990 | None:intergenic | 45.0% | |
| CCGGAGCTATTAGACAATGA+GGG | - | chr7_2:1816968-1816987 | Msa1043610:intron | 45.0% | |
| CGGAGCTATTAGACAATGAG+GGG | - | chr7_2:1816969-1816988 | Msa1043610:intron | 45.0% | |
| TCTGAATGATGAGGACTGCA+CGG | + | chr7_2:1816995-1817014 | None:intergenic | 45.0% | |
| !! | GAAGGAATGCATCTGGTTCT+TGG | - | chr7_2:1817071-1817090 | Msa1043610:CDS | 45.0% |
| ATCAGTGGCTTCTCTCCAAT+AGG | + | chr7_2:1817122-1817141 | None:intergenic | 45.0% | |
| CAATGTCAAGGAAACACTGG+AGG | - | chr7_2:1817159-1817178 | Msa1043610:CDS | 45.0% | |
| !! | CGAGGTCATTTTCACAAGCA+TGG | + | chr7_2:1817276-1817295 | None:intergenic | 45.0% |
| TGCTTGTGAAAATGACCTCG+AGG | - | chr7_2:1817276-1817295 | Msa1043610:CDS | 45.0% | |
| GCTTGTGAAAATGACCTCGA+GGG | - | chr7_2:1817277-1817296 | Msa1043610:CDS | 45.0% | |
| GATTTCTGCGAGAAACATGC+AGG | - | chr7_2:1817632-1817651 | Msa1043610:CDS | 45.0% | |
| CACTGTTTCACTGAGTACAG+GGG | + | chr7_2:1817684-1817703 | None:intergenic | 45.0% | |
| TGTGTCAGATGAAGAGATCG+AGG | - | chr7_2:1817901-1817920 | Msa1043610:CDS | 45.0% | |
| CTGAGATGCTTCACAAGAAG+AGG | + | chr7_2:1817939-1817958 | None:intergenic | 45.0% | |
| GATACCCTTCAAAGAAGAGG+AGG | - | chr7_2:1817958-1817977 | Msa1043610:intron | 45.0% | |
| ATCCGTGACAAAGGAAGTGA+AGG | - | chr7_2:1818021-1818040 | Msa1043610:intron | 45.0% | |
| AAGGAAGTGAAGGAAGCCAA+TGG | - | chr7_2:1818031-1818050 | Msa1043610:intron | 45.0% | |
| AGCCAATGGTAAGTCACAGA+AGG | - | chr7_2:1818045-1818064 | Msa1043610:intron | 45.0% | |
| TGGTAAGTCACAGAAGGTAG+AGG | - | chr7_2:1818051-1818070 | Msa1043610:intron | 45.0% | |
| TAAGTCACAGAAGGTAGAGG+TGG | - | chr7_2:1818054-1818073 | Msa1043610:intron | 45.0% | |
| ACAGAAGGTAGAGGTGGATA+GGG | - | chr7_2:1818060-1818079 | Msa1043610:intron | 45.0% | |
| CAATTCGTGAAGCTCGTGAA+AGG | - | chr7_2:1818152-1818171 | Msa1043610:CDS | 45.0% | |
| ! | CATTTGCTGATGCAAGAGAG+AGG | - | chr7_2:1818176-1818195 | Msa1043610:CDS | 45.0% |
| ! | TCTGGTCCAGAGAAGTATGT+TGG | - | chr7_2:1818439-1818458 | Msa1043610:CDS | 45.0% |
| GATGCACCAACATACTTCTC+TGG | + | chr7_2:1818448-1818467 | None:intergenic | 45.0% | |
| !! | GGTACCGATATCAGGTAAAG+TGG | + | chr7_2:1818544-1818563 | None:intergenic | 45.0% |
| GATTCTACTGGGGTCTTTGA+TGG | - | chr7_2:1818640-1818659 | Msa1043610:CDS | 45.0% | |
| CTGCTCAGAGATGTAAAGCT+AGG | - | chr7_2:1818677-1818696 | Msa1043610:CDS | 45.0% | |
| TCCTATTCTCTGATGCCTCT+CGG | + | chr7_2:1818704-1818723 | None:intergenic | 45.0% | |
| TCAGAGAATAGGAGAACGTG+TGG | - | chr7_2:1818711-1818730 | Msa1043610:CDS | 45.0% | |
| GAATAGGAGAACGTGTGGTA+TGG | - | chr7_2:1818716-1818735 | Msa1043610:CDS | 45.0% | |
| GTTCTACGTTATGCAGGCAA+AGG | - | chr7_2:1818804-1818823 | Msa1043610:CDS | 45.0% | |
| CACAATATTCGTTCCTGCAG+AGG | - | chr7_2:1818935-1818954 | Msa1043610:CDS | 45.0% | |
| CTCTCGATGCCGATGTTAAA+AGG | - | chr7_2:1818968-1818987 | Msa1043610:CDS | 45.0% | |
| TCGATGCCGATGTTAAAAGG+TGG | - | chr7_2:1818971-1818990 | Msa1043610:CDS | 45.0% | |
| TAAAAGGTGGTCAAGTGGGA+AGG | - | chr7_2:1818984-1819003 | Msa1043610:CDS | 45.0% | |
| CGAGACTCGAATGAACAATG+GGG | - | chr7_2:1819233-1819252 | Msa1043610:CDS | 45.0% | |
| GAGACTCGAATGAACAATGG+GGG | - | chr7_2:1819234-1819253 | Msa1043610:CDS | 45.0% | |
| AGACTCGAATGAACAATGGG+GGG | - | chr7_2:1819235-1819254 | Msa1043610:CDS | 45.0% | |
| ! | AGAGTACCCTTGCTTATCTG+TGG | - | chr7_2:1819259-1819278 | Msa1043610:CDS | 45.0% |
| ATTGGTTGCCAACCACTATC+GGG | + | chr7_2:1819593-1819612 | None:intergenic | 45.0% | |
| ! | GCACACAAAGAGTGGCTTTA+CGG | + | chr7_2:1819661-1819680 | None:intergenic | 45.0% |
| GGCAAATTTAGAAGGCCTGT+AGG | - | chr7_2:1820238-1820257 | Msa1043610:CDS | 45.0% | |
| AAGTGTAAGCAGGGACAGCA+TGG | + | chr7_2:1815400-1815419 | None:intergenic | 50.0% | |
| GACGAGGGGATAAAAGAAGG+TGG | - | chr7_2:1815509-1815528 | Msa1043610:intron | 50.0% | |
| GATGCATGCGAGACTAGCAA+CGG | - | chr7_2:1815764-1815783 | Msa1043610:intron | 50.0% | |
| TCTGTTACAGGCTGTGAAGG+AGG | + | chr7_2:1815818-1815837 | None:intergenic | 50.0% | |
| !! | GGCACATATGAAAGTGCTGC+TGG | - | chr7_2:1815908-1815927 | Msa1043610:CDS | 50.0% |
| ACCGACGTACCTAGAAGACA+CGG | - | chr7_2:1815940-1815959 | Msa1043610:CDS | 50.0% | |
| ACCGTGTCTTCTAGGTACGT+CGG | + | chr7_2:1815944-1815963 | None:intergenic | 50.0% | |
| ! | TGTCAAGTGTCGCCTGAATC+AGG | + | chr7_2:1816628-1816647 | None:intergenic | 50.0% |
| ATTCAGGCGACACTTGACAG+TGG | - | chr7_2:1816629-1816648 | Msa1043610:intron | 50.0% | |
| ACAGTGGAGTGACAGACAAG+AGG | - | chr7_2:1816645-1816664 | Msa1043610:intron | 50.0% | |
| TCATCGACGATTTCCCACCT+AGG | + | chr7_2:1816745-1816764 | None:intergenic | 50.0% | |
| AGGTGGGAAATCGTCGATGA+TGG | - | chr7_2:1816745-1816764 | Msa1043610:CDS | 50.0% | |
| GGTGGGAAATCGTCGATGAT+GGG | - | chr7_2:1816746-1816765 | Msa1043610:CDS | 50.0% | |
| CACAGAAGGTAGAGGTGGAT+AGG | - | chr7_2:1818059-1818078 | Msa1043610:intron | 50.0% | |
| TCCATTGCAGTCTTCTCAGC+CGG | + | chr7_2:1818298-1818317 | None:intergenic | 50.0% | |
| GTTGGTGCATCCAGAAGCAA+TGG | - | chr7_2:1818457-1818476 | Msa1043610:CDS | 50.0% | |
| GATGTAAAGCTAGGTCCGAG+AGG | - | chr7_2:1818686-1818705 | Msa1043610:CDS | 50.0% | |
| !! | TCCGAGAGGCATCAGAGAAT+AGG | - | chr7_2:1818700-1818719 | Msa1043610:CDS | 50.0% |
| ACTCGTGCAGAAAGAGCAAG+AGG | - | chr7_2:1818855-1818874 | Msa1043610:CDS | 50.0% | |
| ATCGGGATGCACACAAAGAG+TGG | + | chr7_2:1819669-1819688 | None:intergenic | 50.0% | |
| !! | CTGGATTCTGAGGTGTTGCC+CGG | + | chr7_2:1817418-1817437 | None:intergenic | 55.0% |
| ACCGGCTGAGAAGACTGCAA+TGG | - | chr7_2:1818294-1818313 | Msa1043610:CDS | 55.0% | |
| TAAAGCTGAACGCGCTGCTG+TGG | - | chr7_2:1818327-1818346 | Msa1043610:CDS | 55.0% | |
| TGTGGAGAGAGCAACTGCAG+AGG | - | chr7_2:1818345-1818364 | Msa1043610:CDS | 55.0% | |
| CCACAGAGTGCATGACCATC+AGG | + | chr7_2:1820160-1820179 | None:intergenic | 55.0% | |
| CCTGATGGTCATGCACTCTG+TGG | - | chr7_2:1820157-1820176 | Msa1043610:CDS | 55.0% | |
| TGCAAGAGAGAGGGCAGCTC+TGG | - | chr7_2:1818186-1818205 | Msa1043610:CDS | 60.0% | |
| !! | AGAGAGGGCAGCTCTGGAGA+GGG | - | chr7_2:1818192-1818211 | Msa1043610:CDS | 60.0% |
| ! | AAGAGCACGTGCCCTGGAGA+GGG | - | chr7_2:1818369-1818388 | Msa1043610:CDS | 60.0% |
| CTCAGACAGTGCCCTCTCCA+GGG | + | chr7_2:1818383-1818402 | None:intergenic | 60.0% | |
| TCTCAGACAGTGCCCTCTCC+AGG | + | chr7_2:1818384-1818403 | None:intergenic | 60.0% | |
| !! | GGAGAGGGCACTGTCTGAGA+AGG | - | chr7_2:1818384-1818403 | Msa1043610:CDS | 60.0% |
| GAGCTTCAGCTACCCTCTGC+AGG | + | chr7_2:1818951-1818970 | None:intergenic | 60.0% | |
| AGGTGGTCAAGTGGGAAGGC+AGG | - | chr7_2:1818988-1819007 | Msa1043610:CDS | 60.0% | |
| CAGATCCTTGGGCCCGATAG+TGG | - | chr7_2:1819578-1819597 | Msa1043610:CDS | 60.0% | |
| ! | TCCTTGGGCCCGATAGTGGT+TGG | - | chr7_2:1819582-1819601 | Msa1043610:CDS | 60.0% |
| CCTCGCTGCTGCAGCTTATC+GGG | + | chr7_2:1819686-1819705 | None:intergenic | 60.0% | |
| CCCTCGCTGCTGCAGCTTAT+CGG | + | chr7_2:1819687-1819706 | None:intergenic | 60.0% | |
| CCGATAAGCTGCAGCAGCGA+GGG | - | chr7_2:1819684-1819703 | Msa1043610:CDS | 60.0% | |
| CGATAAGCTGCAGCAGCGAG+GGG | - | chr7_2:1819685-1819704 | Msa1043610:CDS | 60.0% | |
| TAGGGTGTGTGGCTCCCTCG+AGG | + | chr7_2:1817294-1817313 | None:intergenic | 65.0% | |
| CGAGGGAGCCACACACCCTA+TGG | - | chr7_2:1817294-1817313 | Msa1043610:CDS | 65.0% | |
| !! | GAGAGAGGGCAGCTCTGGAG+AGG | - | chr7_2:1818191-1818210 | Msa1043610:CDS | 65.0% |
| ! | AGAGGCAAGAGCACGTGCCC+TGG | - | chr7_2:1818363-1818382 | Msa1043610:CDS | 65.0% |
| ! | CAAGAGCACGTGCCCTGGAG+AGG | - | chr7_2:1818368-1818387 | Msa1043610:CDS | 65.0% |
| GCCAACCACTATCGGGCCCA+AGG | + | chr7_2:1819586-1819605 | None:intergenic | 65.0% | |
| CCCGATAAGCTGCAGCAGCG+AGG | - | chr7_2:1819683-1819702 | Msa1043610:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 1815206 | 1820383 | 1815206 | ID=Msa1043610;Name=Msa1043610 |
| chr7_2 | mRNA | 1815206 | 1820383 | 1815206 | ID=Msa1043610-mRNA-1;Parent=Msa1043610;Name=Msa1043610-mRNA-1;_AED=0.12;_eAED=0.14;_QI=0|0.55|0.5|1|0.88|0.9|10|249|1158 |
| chr7_2 | exon | 1815206 | 1815490 | 1815206 | ID=Msa1043610-mRNA-1:exon:389;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1815832 | 1816008 | 1815832 | ID=Msa1043610-mRNA-1:exon:388;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1816545 | 1816634 | 1816545 | ID=Msa1043610-mRNA-1:exon:387;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1816704 | 1816769 | 1816704 | ID=Msa1043610-mRNA-1:exon:386;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1816857 | 1816954 | 1816857 | ID=Msa1043610-mRNA-1:exon:385;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1817069 | 1817935 | 1817069 | ID=Msa1043610-mRNA-1:exon:384;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1818017 | 1818035 | 1818017 | ID=Msa1043610-mRNA-1:exon:383;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1818106 | 1819068 | 1818106 | ID=Msa1043610-mRNA-1:exon:382;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1819140 | 1819466 | 1819140 | ID=Msa1043610-mRNA-1:exon:381;Parent=Msa1043610-mRNA-1 |
| chr7_2 | exon | 1819550 | 1820383 | 1819550 | ID=Msa1043610-mRNA-1:exon:380;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1819550 | 1820383 | 1819550 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1819140 | 1819466 | 1819140 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1818106 | 1819068 | 1818106 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1818017 | 1818035 | 1818017 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1817069 | 1817935 | 1817069 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1816857 | 1816954 | 1816857 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1816704 | 1816769 | 1816704 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1816545 | 1816634 | 1816545 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1815832 | 1816008 | 1815832 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | CDS | 1815455 | 1815490 | 1815455 | ID=Msa1043610-mRNA-1:cds;Parent=Msa1043610-mRNA-1 |
| chr7_2 | three_prime_UTR | 1815206 | 1815454 | 1815206 | ID=Msa1043610-mRNA-1:three_prime_utr;Parent=Msa1043610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
