Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147970 | sp|Q9SRE5|Y1666_ARATH | 59.653 | 461 | 138 | 10 | 24 | 479 | 7 | 424 | 6.27e-170 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147970 | A0A072VQ62 | 97.727 | 484 | 8 | 1 | 1 | 481 | 1 | 484 | 0.0 | 977 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0138350 | Msa0147970 | 0.976171 | 2.559947e-141 | -8.615850e-47 |
| Msa0147970 | Msa0256430 | -0.801016 | 1.098530e-48 | -8.615850e-47 |
| Msa0147970 | Msa0527200 | 0.974862 | 6.553219e-139 | -8.615850e-47 |
| Msa0147970 | Msa1371530 | 0.975742 | 1.633305e-140 | -8.615850e-47 |
| Msa0147970 | Msa1385570 | 0.812755 | 3.613497e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147970 | MtrunA17_Chr1g0157491 | 98.048 | 461 | 6 | 1 | 24 | 481 | 13 | 473 | 0.0 | 933 |
| Msa0147970 | MtrunA17_Chr6g0467841 | 46.948 | 213 | 101 | 4 | 25 | 230 | 33 | 240 | 5.78e-40 | 150 |
| Msa0147970 | MtrunA17_Chr8g0387051 | 47.030 | 202 | 95 | 5 | 24 | 219 | 42 | 237 | 7.62e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147970 | AT1G76660.1 | 59.653 | 461 | 138 | 10 | 24 | 479 | 7 | 424 | 6.37e-171 | 488 |
| Msa0147970 | AT1G76660.2 | 55.000 | 360 | 117 | 7 | 122 | 479 | 1 | 317 | 4.17e-117 | 347 |
| Msa0147970 | AT5G52430.1 | 43.750 | 224 | 105 | 8 | 24 | 232 | 32 | 249 | 2.03e-34 | 134 |
| Msa0147970 | AT1G63720.1 | 35.401 | 274 | 158 | 6 | 16 | 285 | 28 | 286 | 1.41e-31 | 125 |
| Msa0147970 | AT4G25620.1 | 42.326 | 215 | 98 | 9 | 25 | 226 | 32 | 233 | 4.69e-22 | 99.0 |
Find 167 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGGGTCTGGGAGGGTTTC+TGG | -0.012729 | 1_4:-8099020 | Msa0147970:CDS |
| TTGATATTTCCTGCAGATTC+TGG | 0.185494 | 1_4:+8098033 | None:intergenic |
| TACCTATGCACAATTCTATT+TGG | 0.226625 | 1_4:-8098940 | Msa0147970:CDS |
| TCATCACTGTATCCTGAAAA+TGG | 0.253710 | 1_4:-8099056 | Msa0147970:CDS |
| CCAGCCACTTGGGGCCCATT+TGG | 0.259334 | 1_4:+8099578 | None:intergenic |
| TCACCAGAGTTCCTTGATAT+TGG | 0.281584 | 1_4:+8099128 | None:intergenic |
| AGAAAGATTGTATAAGTATT+AGG | 0.288801 | 1_4:+8100113 | None:intergenic |
| TATGAGGGAATGGAGGATTT+TGG | 0.301503 | 1_4:+8098916 | None:intergenic |
| TTCTTTGCTTGCTTGCCAAC+TGG | 0.303881 | 1_4:+8098570 | None:intergenic |
| CTGGGTCTGGGAGGGTTTCT+GGG | 0.319925 | 1_4:-8099019 | Msa0147970:CDS |
| AGGCTACTGGCAGGACTTCC+AGG | 0.328429 | 1_4:+8099158 | None:intergenic |
| TTGGGGCCCATTTGGTTGAC+TGG | 0.328650 | 1_4:+8099586 | None:intergenic |
| CTGGCTGATCCATTATTATC+AGG | 0.333530 | 1_4:+8099605 | None:intergenic |
| TCCTTGATATTGGAGATATA+AGG | 0.338998 | 1_4:+8099138 | None:intergenic |
| ACTTGGAGTTGTCTAATAGA+TGG | 0.341135 | 1_4:-8097805 | Msa0147970:three_prime_UTR |
| AAAAGATGGGGAGGTTGTTT+GGG | 0.341988 | 1_4:-8099689 | Msa0147970:CDS |
| TCTCGTATTCCTGATAATAA+TGG | 0.351751 | 1_4:-8099614 | Msa0147970:CDS |
| ATGCAGAGGTTGACTATAGA+AGG | 0.361091 | 1_4:-8097991 | Msa0147970:CDS |
| CCAAATGGGCCCCAAGTGGC+TGG | 0.362429 | 1_4:-8099578 | Msa0147970:CDS |
| TCCATGAGAGTATGATTATC+AGG | 0.365296 | 1_4:+8098088 | None:intergenic |
| AAGTGAGCAAAAGGTACATC+TGG | 0.369839 | 1_4:+8099266 | None:intergenic |
| CGACACTAATGATGTTACTA+TGG | 0.373527 | 1_4:-8098994 | Msa0147970:CDS |
| ACCATGATGCCCTTGACCTC+TGG | 0.374021 | 1_4:-8098693 | Msa0147970:CDS |
| GCTCAATCTACGGGTGGAAA+TGG | 0.386458 | 1_4:-8098858 | Msa0147970:CDS |
| ATTTCTTCCACATCTTGCTT+AGG | 0.387788 | 1_4:+8098810 | None:intergenic |
| AGTTGTTGAAATATAAGTTA+AGG | 0.391176 | 1_4:+8097587 | None:intergenic |
| AAATATCAGAGGACTGGGTC+TGG | 0.392276 | 1_4:-8099032 | Msa0147970:CDS |
| TGGAAGAAATAGAAGCTTAC+CGG | 0.393649 | 1_4:-8098797 | Msa0147970:CDS |
| GAAGCTTACCGGGCATCCTT+TGG | 0.402159 | 1_4:-8098786 | Msa0147970:CDS |
| GTTGTTGAAATATAAGTTAA+GGG | 0.405835 | 1_4:+8097588 | None:intergenic |
| CTTAATCTGCCACCATTATG+AGG | 0.431013 | 1_4:+8098900 | None:intergenic |
| AATCTGCAGGAAATATCAAA+TGG | 0.433212 | 1_4:-8098029 | Msa0147970:CDS |
| TAGAATTGTGCATAGGTAGC+AGG | 0.433727 | 1_4:+8098945 | None:intergenic |
| AAGGAAAGAAACTCTTTACT+TGG | 0.439431 | 1_4:-8097822 | Msa0147970:three_prime_UTR |
| CAGAAGCTTGCGAGAAAGAA+AGG | 0.445491 | 1_4:-8097966 | Msa0147970:CDS |
| ATTGGTCAACCCAGCCACTT+GGG | 0.446890 | 1_4:+8099568 | None:intergenic |
| TGTGGGCGAAACTCCCGCTC+AGG | 0.448315 | 1_4:+8099086 | None:intergenic |
| AATCCTCCATTCCCTCATAA+TGG | 0.450708 | 1_4:-8098912 | Msa0147970:CDS |
| AAAACAAGGGACTACATTCA+TGG | 0.451350 | 1_4:+8097723 | None:intergenic |
| GATGTTAGAAAGTGAGCAAA+AGG | 0.453692 | 1_4:+8099257 | None:intergenic |
| CGTGGAGATTTCTGATGTAA+TGG | 0.456383 | 1_4:-8098727 | Msa0147970:CDS |
| AGCTGTGTTTCATGAGCATA+TGG | 0.456787 | 1_4:+8099386 | None:intergenic |
| GTTGTTAAGTGAGCCAACTC+TGG | 0.457024 | 1_4:+8099299 | None:intergenic |
| TCATGTTCTTTCATCAATGA+AGG | 0.458605 | 1_4:+8098642 | None:intergenic |
| ATCTGCAGGAAATATCAAAT+GGG | 0.459223 | 1_4:-8098028 | Msa0147970:CDS |
| AATATCAGAGGACTGGGTCT+GGG | 0.462841 | 1_4:-8099031 | Msa0147970:CDS |
| GTCAACCTCTTTCCCTGAGC+GGG | 0.463781 | 1_4:-8099099 | Msa0147970:CDS |
| GAATATGATTTGTCATGACT+TGG | 0.464293 | 1_4:-8097943 | Msa0147970:exon |
| ACACCCCGTCGAATCTTCAT+TGG | 0.465939 | 1_4:+8100154 | None:intergenic |
| TCTTGCTTAGGACTTCTAGA+AGG | 0.469074 | 1_4:+8098822 | None:intergenic |
| ATCGTATTTGAAGGACCGCC+AGG | 0.474912 | 1_4:+8099422 | None:intergenic |
| TTTAAGTGGATGCAAACGTT+TGG | 0.478600 | 1_4:-8097668 | Msa0147970:three_prime_UTR |
| CGATTAGACGCGAGTCCAGT+TGG | 0.483659 | 1_4:-8098585 | Msa0147970:CDS |
| AATGGAAAATATCAGAGGAC+TGG | 0.485419 | 1_4:-8099038 | Msa0147970:CDS |
| GGATCAGCCAGTCAACCAAA+TGG | 0.486945 | 1_4:-8099593 | Msa0147970:CDS |
| CATTGATTTGCCAGAGGTCA+AGG | 0.488083 | 1_4:+8098683 | None:intergenic |
| GAGAGGAGCAGTAGATGGTT+CGG | 0.488881 | 1_4:+8099331 | None:intergenic |
| GTCGCATACATCGTATTTGA+AGG | 0.489409 | 1_4:+8099413 | None:intergenic |
| GATTGGTCAACCCAGCCACT+TGG | 0.491046 | 1_4:+8099567 | None:intergenic |
| TCATTATCTGCAAACTCACC+TGG | 0.493733 | 1_4:-8099440 | Msa0147970:CDS |
| GGAGTGAGAGGAGCAGTAGA+TGG | 0.494811 | 1_4:+8099326 | None:intergenic |
| GGACAGAGTCGGTTATATCT+AGG | 0.496269 | 1_4:+8097772 | None:intergenic |
| AAAAGGTACATCTGGGGAAG+AGG | 0.502005 | 1_4:+8099274 | None:intergenic |
| GTAGTGAAATTTGAGAAGAC+TGG | 0.504573 | 1_4:+8099353 | None:intergenic |
| GGATATTGTAGCAACAGCTC+TGG | 0.504750 | 1_4:-8098121 | Msa0147970:CDS |
| TCTTGTTTCAGTTCACAGAA+AGG | 0.507174 | 1_4:-8099659 | Msa0147970:CDS |
| CACTGAAACCAAAGGATGCC+CGG | 0.508288 | 1_4:+8098778 | None:intergenic |
| TGATGTTACTATGGCATCAC+AGG | 0.509412 | 1_4:-8098985 | Msa0147970:CDS |
| GACCTCTGGCAAATCAATGA+TGG | 0.511617 | 1_4:-8098679 | Msa0147970:CDS |
| GCCTTATATCTCCAATATCA+AGG | 0.518593 | 1_4:-8099139 | Msa0147970:CDS |
| TTGTTAAGTGAGCCAACTCT+GGG | 0.521849 | 1_4:+8099300 | None:intergenic |
| AATCAAATTCCTGTATGTGA+TGG | 0.526258 | 1_4:-8098549 | Msa0147970:CDS |
| GCCTGATAATCATACTCTCA+TGG | 0.526761 | 1_4:-8098089 | Msa0147970:CDS |
| AGCTATGCCTGTGACTTGAT+TGG | 0.533069 | 1_4:+8099550 | None:intergenic |
| CCTTCATATCCATCACATAC+AGG | 0.533645 | 1_4:+8098540 | None:intergenic |
| ATGGAAAATATCAGAGGACT+GGG | 0.534187 | 1_4:-8099037 | Msa0147970:CDS |
| GATCAGCCAGTCAACCAAAT+GGG | 0.535549 | 1_4:-8099592 | Msa0147970:CDS |
| TATTGGAGATATAAGGCTAC+TGG | 0.535561 | 1_4:+8099145 | None:intergenic |
| AAACTCCCGCTCAGGGAAAG+AGG | 0.535842 | 1_4:+8099094 | None:intergenic |
| AGAAATCTCCACGTATTGAC+TGG | 0.536110 | 1_4:+8098737 | None:intergenic |
| TCATCCAATGAAGATTCGAC+GGG | 0.536667 | 1_4:-8100158 | None:intergenic |
| GTTTCAGTTCACAGAAAGGT+GGG | 0.537711 | 1_4:-8099655 | Msa0147970:CDS |
| CTGCCACCATTATGAGGGAA+TGG | 0.538108 | 1_4:+8098906 | None:intergenic |
| GACTCGGATGCTCAATCTAC+GGG | 0.540156 | 1_4:-8098867 | Msa0147970:CDS |
| AGACTCGGATGCTCAATCTA+CGG | 0.545021 | 1_4:-8098868 | Msa0147970:CDS |
| AATATAAGTTAAGGGAGTAG+AGG | 0.546505 | 1_4:+8097596 | None:intergenic |
| CAAACGTTTGGCTTTAGCAA+GGG | 0.548018 | 1_4:-8097656 | Msa0147970:three_prime_UTR |
| GAAGGTGGAGCTAAGAGAGA+AGG | 0.552066 | 1_4:+8099527 | None:intergenic |
| CTTGGTGACTGTGCAGTTGA+AGG | 0.553984 | 1_4:+8099473 | None:intergenic |
| CGTAAGATCAGAACAAAAGC+AGG | 0.554346 | 1_4:+8097622 | None:intergenic |
| GTAAAGGATGCTGGTGAAGA+AGG | 0.554485 | 1_4:+8099509 | None:intergenic |
| GCGGGAGTTTCGCCCACAGT+GGG | 0.556115 | 1_4:-8099081 | Msa0147970:CDS |
| TCTCCAATATCAAGGAACTC+TGG | 0.557402 | 1_4:-8099131 | Msa0147970:CDS |
| GCCAGAGGTCAAGGGCATCA+TGG | 0.557610 | 1_4:+8098692 | None:intergenic |
| CATGTCAGATCATAAATCAC+CGG | 0.558274 | 1_4:-8098143 | Msa0147970:intron |
| AGTGAGCAAAAGGTACATCT+GGG | 0.558305 | 1_4:+8099267 | None:intergenic |
| GCAAACGTTTGGCTTTAGCA+AGG | 0.558524 | 1_4:-8097657 | Msa0147970:three_prime_UTR |
| TTATCAGGAATACGAGATGC+AGG | 0.558545 | 1_4:+8099620 | None:intergenic |
| CAAATGGGCCCCAAGTGGCT+GGG | 0.560270 | 1_4:-8099577 | Msa0147970:CDS |
| AATAAGATCCGGTCAAACAC+GGG | 0.563633 | 1_4:+8097749 | None:intergenic |
| ATTCATGGATCAATAAGATC+CGG | 0.564258 | 1_4:+8097738 | None:intergenic |
| AAAGGTACATCTGGGGAAGA+GGG | 0.565920 | 1_4:+8099275 | None:intergenic |
| CTGGACTCGCGTCTAATCGA+AGG | 0.566055 | 1_4:+8098589 | None:intergenic |
| TGCAGAGGTTGACTATAGAA+GGG | 0.566479 | 1_4:-8097990 | Msa0147970:CDS |
| TTCATCCAATGAAGATTCGA+CGG | 0.567083 | 1_4:-8100159 | None:intergenic |
| GACACTGCTTGAAGAAAACA+AGG | 0.568492 | 1_4:+8097709 | None:intergenic |
| CAATAAGATCCGGTCAAACA+CGG | 0.569320 | 1_4:+8097748 | None:intergenic |
| AATATGATTTGTCATGACTT+GGG | 0.569512 | 1_4:-8097942 | Msa0147970:exon |
| CCTGTATGTGATGGATATGA+AGG | 0.571427 | 1_4:-8098540 | Msa0147970:intron |
| GTGAAATTTGAGAAGACTGG+AGG | 0.572005 | 1_4:+8099356 | None:intergenic |
| TCAAATACGATGTATGCGAC+TGG | 0.572329 | 1_4:-8099410 | Msa0147970:CDS |
| ACTACATATTCGCTCTACCC+TGG | 0.573659 | 1_4:-8099176 | Msa0147970:CDS |
| GATGAAAGAACATGAGACTC+AGG | 0.576300 | 1_4:-8098634 | Msa0147970:CDS |
| TCAGAGGACTGGGTCTGGGA+GGG | 0.576834 | 1_4:-8099027 | Msa0147970:CDS |
| TGTTTCAGTTCACAGAAAGG+TGG | 0.578020 | 1_4:-8099656 | Msa0147970:CDS |
| GCAGAATGTGTAAAGGATGC+TGG | 0.584993 | 1_4:+8099500 | None:intergenic |
| GTGGGCGAAACTCCCGCTCA+GGG | 0.587338 | 1_4:+8099087 | None:intergenic |
| GGGTTGACCAATCAAGTCAC+AGG | 0.587853 | 1_4:-8099557 | Msa0147970:CDS |
| ATCAGAGGACTGGGTCTGGG+AGG | 0.588077 | 1_4:-8099028 | Msa0147970:CDS |
| TAGAAGTCCTAAGCAAGATG+TGG | 0.589021 | 1_4:-8098817 | Msa0147970:CDS |
| TTGGTCAACCCAGCCACTTG+GGG | 0.591564 | 1_4:+8099569 | None:intergenic |
| ATATGCTCATGAAACACAGC+TGG | 0.591977 | 1_4:-8099384 | Msa0147970:CDS |
| ATTAAGTGTTTCAAAAGACT+CGG | 0.593462 | 1_4:-8098883 | Msa0147970:CDS |
| TGGGATCATCCAGAATCTGC+AGG | 0.595345 | 1_4:-8098042 | Msa0147970:CDS |
| TCTATAGTCAACCTCTGCAT+CGG | 0.596969 | 1_4:+8097994 | None:intergenic |
| CTCATCTGCACTGAAACCAA+AGG | 0.597006 | 1_4:+8098770 | None:intergenic |
| TTCCATCATTGATTTGCCAG+AGG | 0.599588 | 1_4:+8098677 | None:intergenic |
| GTGACTGTGCAGTTGAAGGA+AGG | 0.600512 | 1_4:+8099477 | None:intergenic |
| AGGAAGGGCAGAATGTGTAA+AGG | 0.600967 | 1_4:+8099493 | None:intergenic |
| CTGAAAATGGAAAATATCAG+AGG | 0.602081 | 1_4:-8099043 | Msa0147970:CDS |
| AGAATTGTGCATAGGTAGCA+GGG | 0.602738 | 1_4:+8098946 | None:intergenic |
| GAGCTGTTGCTACAATATCC+CGG | 0.605194 | 1_4:+8098124 | None:intergenic |
| GTTATCATGCTCCGATGCAG+AGG | 0.606978 | 1_4:-8098005 | Msa0147970:CDS |
| GGAGATATAAGGCTACTGGC+AGG | 0.608168 | 1_4:+8099149 | None:intergenic |
| AGAAGCTTGCGAGAAAGAAA+GGG | 0.612565 | 1_4:-8097965 | Msa0147970:CDS |
| GGAAGAAATAGAAGCTTACC+GGG | 0.612807 | 1_4:-8098796 | Msa0147970:CDS |
| TTAATCTGCCACCATTATGA+GGG | 0.614309 | 1_4:+8098901 | None:intergenic |
| ATTGATTTGCCAGAGGTCAA+GGG | 0.615854 | 1_4:+8098684 | None:intergenic |
| TATAAGTATTAGGAAGTCAA+CGG | 0.619865 | 1_4:+8100123 | None:intergenic |
| GGCTACTGGCAGGACTTCCA+GGG | 0.622814 | 1_4:+8099159 | None:intergenic |
| GTGGAAATGGACATCAGAGT+AGG | 0.623948 | 1_4:-8098845 | Msa0147970:CDS |
| GAAAGAACATGAGACTCAGG+TGG | 0.626882 | 1_4:-8098631 | Msa0147970:CDS |
| GTCCAAATAGAATTGTGCAT+AGG | 0.628022 | 1_4:+8098938 | None:intergenic |
| AGCGGGAGTTTCGCCCACAG+TGG | 0.628097 | 1_4:-8099082 | Msa0147970:CDS |
| CCACCATTATGAGGGAATGG+AGG | 0.638910 | 1_4:+8098909 | None:intergenic |
| CCTCCATTCCCTCATAATGG+TGG | 0.644991 | 1_4:-8098909 | Msa0147970:CDS |
| AAGGATGCTGGTGAAGAAGG+TGG | 0.646683 | 1_4:+8099512 | None:intergenic |
| ATGTCAGATCATAAATCACC+GGG | 0.648766 | 1_4:-8098142 | Msa0147970:intron |
| GTTAAGTGAGCCAACTCTGG+GGG | 0.650031 | 1_4:+8099302 | None:intergenic |
| ACAGTGATGAATCCCACTGT+GGG | 0.651266 | 1_4:+8099069 | None:intergenic |
| TCGGATGCTCAATCTACGGG+TGG | 0.656294 | 1_4:-8098864 | Msa0147970:CDS |
| TGTCAACCTCTTTCCCTGAG+CGG | 0.657293 | 1_4:-8099100 | Msa0147970:CDS |
| GCAGAGGTTGACTATAGAAG+GGG | 0.658601 | 1_4:-8097989 | Msa0147970:CDS |
| ATAAGATCCGGTCAAACACG+GGG | 0.659713 | 1_4:+8097750 | None:intergenic |
| TATAACCACCAGTCAATACG+TGG | 0.662605 | 1_4:-8098745 | Msa0147970:CDS |
| AAAGAACATGAGACTCAGGT+GGG | 0.665136 | 1_4:-8098630 | Msa0147970:CDS |
| TCTGCAGGAAATATCAAATG+GGG | 0.670683 | 1_4:-8098027 | Msa0147970:CDS |
| TCAACCAAATGGGCCCCAAG+TGG | 0.677451 | 1_4:-8099582 | Msa0147970:CDS |
| AATCTCCACGTATTGACTGG+TGG | 0.682416 | 1_4:+8098740 | None:intergenic |
| TGACTGTGCAGTTGAAGGAA+GGG | 0.689565 | 1_4:+8099478 | None:intergenic |
| TACAGTGATGAATCCCACTG+TGG | 0.717481 | 1_4:+8099068 | None:intergenic |
| TGTTAAGTGAGCCAACTCTG+GGG | 0.718392 | 1_4:+8099301 | None:intergenic |
| GTGAGCAAAAGGTACATCTG+GGG | 0.723428 | 1_4:+8099268 | None:intergenic |
| TTATCTGCAAACTCACCTGG+CGG | 0.723487 | 1_4:-8099437 | Msa0147970:CDS |
| CATCCAATGAAGATTCGACG+GGG | 0.734426 | 1_4:-8100157 | None:intergenic |
| ACACTGCTTGAAGAAAACAA+GGG | 0.754124 | 1_4:+8097710 | None:intergenic |
| TAAGATCCGGTCAAACACGG+GGG | 0.764107 | 1_4:+8097751 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAATTTTAAGCTTTTTTA+GGG | + | chr1_4:8097875-8097894 | None:intergenic | 15.0% |
| !! | AACATATTTAAGGATAAAAT+TGG | + | chr1_4:8099527-8099546 | None:intergenic | 15.0% |
| !! | AGAAAGATTGTATAAGTATT+AGG | + | chr1_4:8097591-8097610 | None:intergenic | 20.0% |
| !!! | CTGAAATTTTAAGCTTTTTT+AGG | + | chr1_4:8097876-8097895 | None:intergenic | 20.0% |
| !!! | TATGTTGTAGTTACTTTTAA+TGG | - | chr1_4:8099373-8099392 | Msa0147970:CDS | 20.0% |
| !! | TGAAGATATATTCTCAAAAA+TGG | - | chr1_4:8099639-8099658 | Msa0147970:CDS | 20.0% |
| !! | GAAGATATATTCTCAAAAAT+GGG | - | chr1_4:8099640-8099659 | Msa0147970:CDS | 20.0% |
| !!! | GCGGTTTTTTAAATATAAAA+AGG | + | chr1_4:8099837-8099856 | None:intergenic | 20.0% |
| !!! | TTAATGTTTTGACTTTTAAG+TGG | - | chr1_4:8100019-8100038 | Msa0147970:intron | 20.0% |
| !! | GTTGTTGAAATATAAGTTAA+GGG | + | chr1_4:8100116-8100135 | None:intergenic | 20.0% |
| !! | AGTTGTTGAAATATAAGTTA+AGG | + | chr1_4:8100117-8100136 | None:intergenic | 20.0% |
| ! | TATAAGTATTAGGAAGTCAA+CGG | + | chr1_4:8097581-8097600 | None:intergenic | 25.0% |
| !! | TACAATCTTTCTCTTTTCTT+CGG | - | chr1_4:8097599-8097618 | Msa0147970:three_prime_UTR | 25.0% |
| ! | TTGAAGAGATTAATATGTGT+AGG | + | chr1_4:8097649-8097668 | None:intergenic | 25.0% |
| ! | TATTAACTGTTCCAAACATA+TGG | + | chr1_4:8097798-8097817 | None:intergenic | 25.0% |
| !! | ATATGTTTGGAACAGTTAAT+AGG | - | chr1_4:8097797-8097816 | Msa0147970:three_prime_UTR | 25.0% |
| ! | GATAATGACAAAAAACAACT+TGG | + | chr1_4:8098249-8098268 | None:intergenic | 25.0% |
| ! | ATTAAGTGTTTCAAAAGACT+CGG | - | chr1_4:8098818-8098837 | Msa0147970:CDS | 25.0% |
| !!! | TACTCTTATTTTGAAAGAGA+GGG | + | chr1_4:8099433-8099452 | None:intergenic | 25.0% |
| ! | GCAAGAAAGAAACATATTTA+AGG | + | chr1_4:8099537-8099556 | None:intergenic | 25.0% |
| !! | AATATGATTTGTCATGACTT+GGG | - | chr1_4:8099759-8099778 | Msa0147970:intron | 25.0% |
| !!! | TCTTTCTTTCCTTCTTTTTT+TGG | + | chr1_4:8099859-8099878 | None:intergenic | 25.0% |
| ! | AAAAAGAAGGAAAGAAAGAA+AGG | - | chr1_4:8099860-8099879 | Msa0147970:intron | 25.0% |
| !!! | ACATACAACTTTTGTTGTAT+TGG | - | chr1_4:8100141-8100160 | Msa0147970:CDS | 25.0% |
| !!! | CATACAACTTTTGTTGTATT+GGG | - | chr1_4:8100142-8100161 | Msa0147970:CDS | 25.0% |
| ! | ACAATCTTTCTCTTTTCTTC+GGG | - | chr1_4:8097600-8097619 | Msa0147970:three_prime_UTR | 30.0% |
| ! | TTTTCGTAGAAAATTGCATG+TGG | - | chr1_4:8097672-8097691 | Msa0147970:three_prime_UTR | 30.0% |
| !!! | GTGTTTTAGGATCTAAGTTT+TGG | + | chr1_4:8097699-8097718 | None:intergenic | 30.0% |
| ! | GAAGTATTTAGCCATATGTT+TGG | - | chr1_4:8097784-8097803 | Msa0147970:three_prime_UTR | 30.0% |
| TCTCGTATTCCTGATAATAA+TGG | - | chr1_4:8098087-8098106 | Msa0147970:CDS | 30.0% | |
| TCCTTGATATTGGAGATATA+AGG | + | chr1_4:8098566-8098585 | None:intergenic | 30.0% | |
| ! | CTCTGATATTTTCCATTTTC+AGG | + | chr1_4:8098660-8098679 | None:intergenic | 30.0% |
| CTGAAAATGGAAAATATCAG+AGG | - | chr1_4:8098658-8098677 | Msa0147970:CDS | 30.0% | |
| TACCTATGCACAATTCTATT+TGG | - | chr1_4:8098761-8098780 | Msa0147970:CDS | 30.0% | |
| TCATGTTCTTTCATCAATGA+AGG | + | chr1_4:8099062-8099081 | None:intergenic | 30.0% | |
| AATCAAATTCCTGTATGTGA+TGG | - | chr1_4:8099152-8099171 | Msa0147970:CDS | 30.0% | |
| ! | ATGAAGGTATGCTGTAAAAA+CGG | - | chr1_4:8099177-8099196 | Msa0147970:CDS | 30.0% |
| TAGTACATCTTGAGAAATTG+TGG | - | chr1_4:8099219-8099238 | Msa0147970:CDS | 30.0% | |
| AAAGTAACTACAACATACCA+AGG | + | chr1_4:8099370-8099389 | None:intergenic | 30.0% | |
| !!! | CTACTCTTATTTTGAAAGAG+AGG | + | chr1_4:8099434-8099453 | None:intergenic | 30.0% |
| AATCTGCAGGAAATATCAAA+TGG | - | chr1_4:8099672-8099691 | Msa0147970:CDS | 30.0% | |
| ATCTGCAGGAAATATCAAAT+GGG | - | chr1_4:8099673-8099692 | Msa0147970:CDS | 30.0% | |
| ! | GAATATGATTTGTCATGACT+TGG | - | chr1_4:8099758-8099777 | Msa0147970:intron | 30.0% |
| AAAAAACCGCCAAAAAAAGA+AGG | - | chr1_4:8099847-8099866 | Msa0147970:intron | 30.0% | |
| !!! | TTCTTTCCTTCTTTTTTTGG+CGG | + | chr1_4:8099856-8099875 | None:intergenic | 30.0% |
| AAGGAAAGAAACTCTTTACT+TGG | - | chr1_4:8099879-8099898 | Msa0147970:intron | 30.0% | |
| ATTCATGGATCAATAAGATC+CGG | + | chr1_4:8099966-8099985 | None:intergenic | 30.0% | |
| AATATAAGTTAAGGGAGTAG+AGG | + | chr1_4:8100108-8100127 | None:intergenic | 30.0% | |
| ! | AAAGCTACTCACTGTGTTTT+AGG | + | chr1_4:8097712-8097731 | None:intergenic | 35.0% |
| ! | ACAGTGAGTAGCTTTTATCT+TGG | - | chr1_4:8097717-8097736 | Msa0147970:three_prime_UTR | 35.0% |
| TAGGTAGAAAGATGTTTGAG+AGG | - | chr1_4:8097816-8097835 | Msa0147970:three_prime_UTR | 35.0% | |
| TGTCAATGCAAGTCAAGAAA+GGG | + | chr1_4:8097988-8098007 | None:intergenic | 35.0% | |
| ! | TGCATTGACAGAGAAAAAGA+TGG | - | chr1_4:8097998-8098017 | Msa0147970:CDS | 35.0% |
| ! | GCATTGACAGAGAAAAAGAT+GGG | - | chr1_4:8097999-8098018 | Msa0147970:CDS | 35.0% |
| CATTGACAGAGAAAAAGATG+GGG | - | chr1_4:8098000-8098019 | Msa0147970:CDS | 35.0% | |
| ! | TCTTGTTTCAGTTCACAGAA+AGG | - | chr1_4:8098042-8098061 | Msa0147970:CDS | 35.0% |
| GTAGTGAAATTTGAGAAGAC+TGG | + | chr1_4:8098351-8098370 | None:intergenic | 35.0% | |
| GATGTTAGAAAGTGAGCAAA+AGG | + | chr1_4:8098447-8098466 | None:intergenic | 35.0% | |
| TCCTCAGCAAATCTCAAAAA+TGG | - | chr1_4:8098465-8098484 | Msa0147970:intron | 35.0% | |
| !!! | ACCATTTTTGAGATTTGCTG+AGG | + | chr1_4:8098469-8098488 | None:intergenic | 35.0% |
| TCAGCAAATCTCAAAAATGG+TGG | - | chr1_4:8098468-8098487 | Msa0147970:intron | 35.0% | |
| AAATCTCAAAAATGGTGGCA+AGG | - | chr1_4:8098473-8098492 | Msa0147970:intron | 35.0% | |
| AATCTCAAAAATGGTGGCAA+GGG | - | chr1_4:8098474-8098493 | Msa0147970:intron | 35.0% | |
| TATTGGAGATATAAGGCTAC+TGG | + | chr1_4:8098559-8098578 | None:intergenic | 35.0% | |
| GCCTTATATCTCCAATATCA+AGG | - | chr1_4:8098562-8098581 | Msa0147970:CDS | 35.0% | |
| TCATCACTGTATCCTGAAAA+TGG | - | chr1_4:8098645-8098664 | Msa0147970:CDS | 35.0% | |
| AATGGAAAATATCAGAGGAC+TGG | - | chr1_4:8098663-8098682 | Msa0147970:CDS | 35.0% | |
| ATGGAAAATATCAGAGGACT+GGG | - | chr1_4:8098664-8098683 | Msa0147970:CDS | 35.0% | |
| CGACACTAATGATGTTACTA+TGG | - | chr1_4:8098707-8098726 | Msa0147970:CDS | 35.0% | |
| GTCCAAATAGAATTGTGCAT+AGG | + | chr1_4:8098766-8098785 | None:intergenic | 35.0% | |
| TTAATCTGCCACCATTATGA+GGG | + | chr1_4:8098803-8098822 | None:intergenic | 35.0% | |
| ATTTCTTCCACATCTTGCTT+AGG | + | chr1_4:8098894-8098913 | None:intergenic | 35.0% | |
| TGGAAGAAATAGAAGCTTAC+CGG | - | chr1_4:8098904-8098923 | Msa0147970:CDS | 35.0% | |
| ! | TTTGAAGTTGCTCTTCTCTA+TGG | + | chr1_4:8099294-8099313 | None:intergenic | 35.0% |
| CATGTCAGATCATAAATCAC+CGG | - | chr1_4:8099558-8099577 | Msa0147970:CDS | 35.0% | |
| ATGTCAGATCATAAATCACC+GGG | - | chr1_4:8099559-8099578 | Msa0147970:CDS | 35.0% | |
| ! | TCCATGAGAGTATGATTATC+AGG | + | chr1_4:8099616-8099635 | None:intergenic | 35.0% |
| TTGATATTTCCTGCAGATTC+TGG | + | chr1_4:8099671-8099690 | None:intergenic | 35.0% | |
| TCTGCAGGAAATATCAAATG+GGG | - | chr1_4:8099674-8099693 | Msa0147970:CDS | 35.0% | |
| ACTTGGAGTTGTCTAATAGA+TGG | - | chr1_4:8099896-8099915 | Msa0147970:intron | 35.0% | |
| AAAACAAGGGACTACATTCA+TGG | + | chr1_4:8099981-8100000 | None:intergenic | 35.0% | |
| ACACTGCTTGAAGAAAACAA+GGG | + | chr1_4:8099994-8100013 | None:intergenic | 35.0% | |
| TTTAAGTGGATGCAAACGTT+TGG | - | chr1_4:8100033-8100052 | Msa0147970:intron | 35.0% | |
| !! | CTTTTCTTCGGGTTTGTGAT+TGG | - | chr1_4:8097611-8097630 | Msa0147970:three_prime_UTR | 40.0% |
| CTGTCAATGCAAGTCAAGAA+AGG | + | chr1_4:8097989-8098008 | None:intergenic | 40.0% | |
| AAAAAGATGGGGAGGTTGTT+TGG | - | chr1_4:8098011-8098030 | Msa0147970:CDS | 40.0% | |
| AAAAGATGGGGAGGTTGTTT+GGG | - | chr1_4:8098012-8098031 | Msa0147970:CDS | 40.0% | |
| TGTTTCAGTTCACAGAAAGG+TGG | - | chr1_4:8098045-8098064 | Msa0147970:CDS | 40.0% | |
| GTTTCAGTTCACAGAAAGGT+GGG | - | chr1_4:8098046-8098065 | Msa0147970:CDS | 40.0% | |
| TTATCAGGAATACGAGATGC+AGG | + | chr1_4:8098084-8098103 | None:intergenic | 40.0% | |
| CTGGCTGATCCATTATTATC+AGG | + | chr1_4:8098099-8098118 | None:intergenic | 40.0% | |
| TCATTATCTGCAAACTCACC+TGG | - | chr1_4:8098261-8098280 | Msa0147970:intron | 40.0% | |
| GTCGCATACATCGTATTTGA+AGG | + | chr1_4:8098291-8098310 | None:intergenic | 40.0% | |
| TCAAATACGATGTATGCGAC+TGG | - | chr1_4:8098291-8098310 | Msa0147970:intron | 40.0% | |
| AGCTGTGTTTCATGAGCATA+TGG | + | chr1_4:8098318-8098337 | None:intergenic | 40.0% | |
| ATATGCTCATGAAACACAGC+TGG | - | chr1_4:8098317-8098336 | Msa0147970:intron | 40.0% | |
| GTGAAATTTGAGAAGACTGG+AGG | + | chr1_4:8098348-8098367 | None:intergenic | 40.0% | |
| TTGTTAAGTGAGCCAACTCT+GGG | + | chr1_4:8098404-8098423 | None:intergenic | 40.0% | |
| ! | AGTGAGCAAAAGGTACATCT+GGG | + | chr1_4:8098437-8098456 | None:intergenic | 40.0% |
| ! | AAGTGAGCAAAAGGTACATC+TGG | + | chr1_4:8098438-8098457 | None:intergenic | 40.0% |
| TCTCCAATATCAAGGAACTC+TGG | - | chr1_4:8098570-8098589 | Msa0147970:CDS | 40.0% | |
| TCACCAGAGTTCCTTGATAT+TGG | + | chr1_4:8098576-8098595 | None:intergenic | 40.0% | |
| TGATGTTACTATGGCATCAC+AGG | - | chr1_4:8098716-8098735 | Msa0147970:CDS | 40.0% | |
| AGAATTGTGCATAGGTAGCA+GGG | + | chr1_4:8098758-8098777 | None:intergenic | 40.0% | |
| TAGAATTGTGCATAGGTAGC+AGG | + | chr1_4:8098759-8098778 | None:intergenic | 40.0% | |
| ! | TATGAGGGAATGGAGGATTT+TGG | + | chr1_4:8098788-8098807 | None:intergenic | 40.0% |
| AATCCTCCATTCCCTCATAA+TGG | - | chr1_4:8098789-8098808 | Msa0147970:CDS | 40.0% | |
| CTTAATCTGCCACCATTATG+AGG | + | chr1_4:8098804-8098823 | None:intergenic | 40.0% | |
| TCTTGCTTAGGACTTCTAGA+AGG | + | chr1_4:8098882-8098901 | None:intergenic | 40.0% | |
| TAGAAGTCCTAAGCAAGATG+TGG | - | chr1_4:8098884-8098903 | Msa0147970:CDS | 40.0% | |
| GGAAGAAATAGAAGCTTACC+GGG | - | chr1_4:8098905-8098924 | Msa0147970:CDS | 40.0% | |
| TATAACCACCAGTCAATACG+TGG | - | chr1_4:8098956-8098975 | Msa0147970:CDS | 40.0% | |
| ! | AGAAATCTCCACGTATTGAC+TGG | + | chr1_4:8098967-8098986 | None:intergenic | 40.0% |
| CGTGGAGATTTCTGATGTAA+TGG | - | chr1_4:8098974-8098993 | Msa0147970:CDS | 40.0% | |
| !! | ATTGATTTGCCAGAGGTCAA+GGG | + | chr1_4:8099020-8099039 | None:intergenic | 40.0% |
| !! | TTCCATCATTGATTTGCCAG+AGG | + | chr1_4:8099027-8099046 | None:intergenic | 40.0% |
| GATGAAAGAACATGAGACTC+AGG | - | chr1_4:8099067-8099086 | Msa0147970:CDS | 40.0% | |
| AAAGAACATGAGACTCAGGT+GGG | - | chr1_4:8099071-8099090 | Msa0147970:CDS | 40.0% | |
| CCTTCATATCCATCACATAC+AGG | + | chr1_4:8099164-8099183 | None:intergenic | 40.0% | |
| !! | CCTGTATGTGATGGATATGA+AGG | - | chr1_4:8099161-8099180 | Msa0147970:CDS | 40.0% |
| CATCTCAATAACTAGAGCCT+TGG | - | chr1_4:8099350-8099369 | Msa0147970:CDS | 40.0% | |
| GCCTGATAATCATACTCTCA+TGG | - | chr1_4:8099612-8099631 | Msa0147970:CDS | 40.0% | |
| TCTATAGTCAACCTCTGCAT+CGG | + | chr1_4:8099710-8099729 | None:intergenic | 40.0% | |
| ATGCAGAGGTTGACTATAGA+AGG | - | chr1_4:8099710-8099729 | Msa0147970:intron | 40.0% | |
| TGCAGAGGTTGACTATAGAA+GGG | - | chr1_4:8099711-8099730 | Msa0147970:intron | 40.0% | |
| AGAAGCTTGCGAGAAAGAAA+GGG | - | chr1_4:8099736-8099755 | Msa0147970:intron | 40.0% | |
| AATAAGATCCGGTCAAACAC+GGG | + | chr1_4:8099955-8099974 | None:intergenic | 40.0% | |
| CAATAAGATCCGGTCAAACA+CGG | + | chr1_4:8099956-8099975 | None:intergenic | 40.0% | |
| GACACTGCTTGAAGAAAACA+AGG | + | chr1_4:8099995-8100014 | None:intergenic | 40.0% | |
| !! | CAAACGTTTGGCTTTAGCAA+GGG | - | chr1_4:8100045-8100064 | Msa0147970:intron | 40.0% |
| CGTAAGATCAGAACAAAAGC+AGG | + | chr1_4:8100082-8100101 | None:intergenic | 40.0% | |
| CTTGGCATGACTAGTAGATG+CGG | - | chr1_4:8097735-8097754 | Msa0147970:three_prime_UTR | 45.0% | |
| TGACAGAGAAAAAGATGGGG+AGG | - | chr1_4:8098003-8098022 | Msa0147970:CDS | 45.0% | |
| GATCAGCCAGTCAACCAAAT+GGG | - | chr1_4:8098109-8098128 | Msa0147970:CDS | 45.0% | |
| AGCTATGCCTGTGACTTGAT+TGG | + | chr1_4:8098154-8098173 | None:intergenic | 45.0% | |
| GTAAAGGATGCTGGTGAAGA+AGG | + | chr1_4:8098195-8098214 | None:intergenic | 45.0% | |
| GCAGAATGTGTAAAGGATGC+TGG | + | chr1_4:8098204-8098223 | None:intergenic | 45.0% | |
| AGGAAGGGCAGAATGTGTAA+AGG | + | chr1_4:8098211-8098230 | None:intergenic | 45.0% | |
| TGACTGTGCAGTTGAAGGAA+GGG | + | chr1_4:8098226-8098245 | None:intergenic | 45.0% | |
| TTATCTGCAAACTCACCTGG+CGG | - | chr1_4:8098264-8098283 | Msa0147970:intron | 45.0% | |
| TGTTAAGTGAGCCAACTCTG+GGG | + | chr1_4:8098403-8098422 | None:intergenic | 45.0% | |
| GTTGTTAAGTGAGCCAACTC+TGG | + | chr1_4:8098405-8098424 | None:intergenic | 45.0% | |
| ! | AAAGGTACATCTGGGGAAGA+GGG | + | chr1_4:8098429-8098448 | None:intergenic | 45.0% |
| ! | AAAAGGTACATCTGGGGAAG+AGG | + | chr1_4:8098430-8098449 | None:intergenic | 45.0% |
| ! | GTGAGCAAAAGGTACATCTG+GGG | + | chr1_4:8098436-8098455 | None:intergenic | 45.0% |
| ACTACATATTCGCTCTACCC+TGG | - | chr1_4:8098525-8098544 | Msa0147970:intron | 45.0% | |
| ACAGTGATGAATCCCACTGT+GGG | + | chr1_4:8098635-8098654 | None:intergenic | 45.0% | |
| TACAGTGATGAATCCCACTG+TGG | + | chr1_4:8098636-8098655 | None:intergenic | 45.0% | |
| AAATATCAGAGGACTGGGTC+TGG | - | chr1_4:8098669-8098688 | Msa0147970:CDS | 45.0% | |
| AATATCAGAGGACTGGGTCT+GGG | - | chr1_4:8098670-8098689 | Msa0147970:CDS | 45.0% | |
| AGACTCGGATGCTCAATCTA+CGG | - | chr1_4:8098833-8098852 | Msa0147970:CDS | 45.0% | |
| GTGGAAATGGACATCAGAGT+AGG | - | chr1_4:8098856-8098875 | Msa0147970:CDS | 45.0% | |
| CTCATCTGCACTGAAACCAA+AGG | + | chr1_4:8098934-8098953 | None:intergenic | 45.0% | |
| !! | AATCTCCACGTATTGACTGG+TGG | + | chr1_4:8098964-8098983 | None:intergenic | 45.0% |
| !! | CATTGATTTGCCAGAGGTCA+AGG | + | chr1_4:8099021-8099040 | None:intergenic | 45.0% |
| GACCTCTGGCAAATCAATGA+TGG | - | chr1_4:8099022-8099041 | Msa0147970:CDS | 45.0% | |
| GAAAGAACATGAGACTCAGG+TGG | - | chr1_4:8099070-8099089 | Msa0147970:CDS | 45.0% | |
| TTCTTTGCTTGCTTGCCAAC+TGG | + | chr1_4:8099134-8099153 | None:intergenic | 45.0% | |
| GAGCTGTTGCTACAATATCC+CGG | + | chr1_4:8099580-8099599 | None:intergenic | 45.0% | |
| GGATATTGTAGCAACAGCTC+TGG | - | chr1_4:8099580-8099599 | Msa0147970:CDS | 45.0% | |
| GCAGAGGTTGACTATAGAAG+GGG | - | chr1_4:8099712-8099731 | Msa0147970:intron | 45.0% | |
| CAGAAGCTTGCGAGAAAGAA+AGG | - | chr1_4:8099735-8099754 | Msa0147970:intron | 45.0% | |
| GGACAGAGTCGGTTATATCT+AGG | + | chr1_4:8099932-8099951 | None:intergenic | 45.0% | |
| ATAAGATCCGGTCAAACACG+GGG | + | chr1_4:8099954-8099973 | None:intergenic | 45.0% | |
| !! | GCAAACGTTTGGCTTTAGCA+AGG | - | chr1_4:8100044-8100063 | Msa0147970:intron | 45.0% |
| !!! | TTATTTTATAAAAGATAAAA+TGG | + | chr1_4:8099490-8099509 | None:intergenic | 5.0% |
| GGATCAGCCAGTCAACCAAA+TGG | - | chr1_4:8098108-8098127 | Msa0147970:CDS | 50.0% | |
| ATTGGTCAACCCAGCCACTT+GGG | + | chr1_4:8098136-8098155 | None:intergenic | 50.0% | |
| GGGTTGACCAATCAAGTCAC+AGG | - | chr1_4:8098144-8098163 | Msa0147970:intron | 50.0% | |
| GAAGGTGGAGCTAAGAGAGA+AGG | + | chr1_4:8098177-8098196 | None:intergenic | 50.0% | |
| AAGGATGCTGGTGAAGAAGG+TGG | + | chr1_4:8098192-8098211 | None:intergenic | 50.0% | |
| GTGACTGTGCAGTTGAAGGA+AGG | + | chr1_4:8098227-8098246 | None:intergenic | 50.0% | |
| ! | CTTGGTGACTGTGCAGTTGA+AGG | + | chr1_4:8098231-8098250 | None:intergenic | 50.0% |
| ATCGTATTTGAAGGACCGCC+AGG | + | chr1_4:8098282-8098301 | None:intergenic | 50.0% | |
| GAGAGGAGCAGTAGATGGTT+CGG | + | chr1_4:8098373-8098392 | None:intergenic | 50.0% | |
| GTTAAGTGAGCCAACTCTGG+GGG | + | chr1_4:8098402-8098421 | None:intergenic | 50.0% | |
| GGAGATATAAGGCTACTGGC+AGG | + | chr1_4:8098555-8098574 | None:intergenic | 50.0% | |
| TGTCAACCTCTTTCCCTGAG+CGG | - | chr1_4:8098601-8098620 | Msa0147970:CDS | 50.0% | |
| CCACCATTATGAGGGAATGG+AGG | + | chr1_4:8098795-8098814 | None:intergenic | 50.0% | |
| CCTCCATTCCCTCATAATGG+TGG | - | chr1_4:8098792-8098811 | Msa0147970:CDS | 50.0% | |
| CTGCCACCATTATGAGGGAA+TGG | + | chr1_4:8098798-8098817 | None:intergenic | 50.0% | |
| GACTCGGATGCTCAATCTAC+GGG | - | chr1_4:8098834-8098853 | Msa0147970:CDS | 50.0% | |
| GCTCAATCTACGGGTGGAAA+TGG | - | chr1_4:8098843-8098862 | Msa0147970:CDS | 50.0% | |
| CACTGAAACCAAAGGATGCC+CGG | + | chr1_4:8098926-8098945 | None:intergenic | 50.0% | |
| TGGGATCATCCAGAATCTGC+AGG | - | chr1_4:8099659-8099678 | Msa0147970:CDS | 50.0% | |
| GTTATCATGCTCCGATGCAG+AGG | - | chr1_4:8099696-8099715 | Msa0147970:intron | 50.0% | |
| TAAGATCCGGTCAAACACGG+GGG | + | chr1_4:8099953-8099972 | None:intergenic | 50.0% | |
| TTGGGGCCCATTTGGTTGAC+TGG | + | chr1_4:8098118-8098137 | None:intergenic | 55.0% | |
| TCAACCAAATGGGCCCCAAG+TGG | - | chr1_4:8098119-8098138 | Msa0147970:CDS | 55.0% | |
| TTGGTCAACCCAGCCACTTG+GGG | + | chr1_4:8098135-8098154 | None:intergenic | 55.0% | |
| ! | GATTGGTCAACCCAGCCACT+TGG | + | chr1_4:8098137-8098156 | None:intergenic | 55.0% |
| GGAGTGAGAGGAGCAGTAGA+TGG | + | chr1_4:8098378-8098397 | None:intergenic | 55.0% | |
| GTCAACCTCTTTCCCTGAGC+GGG | - | chr1_4:8098602-8098621 | Msa0147970:CDS | 55.0% | |
| AAACTCCCGCTCAGGGAAAG+AGG | + | chr1_4:8098610-8098629 | None:intergenic | 55.0% | |
| TCGGATGCTCAATCTACGGG+TGG | - | chr1_4:8098837-8098856 | Msa0147970:CDS | 55.0% | |
| GAAGCTTACCGGGCATCCTT+TGG | - | chr1_4:8098915-8098934 | Msa0147970:CDS | 55.0% | |
| ACCATGATGCCCTTGACCTC+TGG | - | chr1_4:8099008-8099027 | Msa0147970:CDS | 55.0% | |
| CTGGACTCGCGTCTAATCGA+AGG | + | chr1_4:8099115-8099134 | None:intergenic | 55.0% | |
| CGATTAGACGCGAGTCCAGT+TGG | - | chr1_4:8099116-8099135 | Msa0147970:CDS | 55.0% | |
| TCAAACACGGGGGACAGAGT+CGG | + | chr1_4:8099943-8099962 | None:intergenic | 55.0% | |
| CAAATGGGCCCCAAGTGGCT+GGG | - | chr1_4:8098124-8098143 | Msa0147970:CDS | 60.0% | |
| ! | AACTCTGGGGGAGGAGTGAG+AGG | + | chr1_4:8098390-8098409 | None:intergenic | 60.0% |
| TCTCACTCCTCCCCCAGAGT+TGG | - | chr1_4:8098389-8098408 | Msa0147970:intron | 60.0% | |
| ! | AAGTGAGCCAACTCTGGGGG+AGG | + | chr1_4:8098399-8098418 | None:intergenic | 60.0% |
| GGCTACTGGCAGGACTTCCA+GGG | + | chr1_4:8098545-8098564 | None:intergenic | 60.0% | |
| AGGCTACTGGCAGGACTTCC+AGG | + | chr1_4:8098546-8098565 | None:intergenic | 60.0% | |
| ATCAGAGGACTGGGTCTGGG+AGG | - | chr1_4:8098673-8098692 | Msa0147970:CDS | 60.0% | |
| TCAGAGGACTGGGTCTGGGA+GGG | - | chr1_4:8098674-8098693 | Msa0147970:CDS | 60.0% | |
| ACTGGGTCTGGGAGGGTTTC+TGG | - | chr1_4:8098681-8098700 | Msa0147970:CDS | 60.0% | |
| CTGGGTCTGGGAGGGTTTCT+GGG | - | chr1_4:8098682-8098701 | Msa0147970:CDS | 60.0% | |
| !! | GCCAGAGGTCAAGGGCATCA+TGG | + | chr1_4:8099012-8099031 | None:intergenic | 60.0% |
| CTCTGTCCCCCGTGTTTGAC+CGG | - | chr1_4:8099944-8099963 | Msa0147970:intron | 60.0% | |
| CCAGCCACTTGGGGCCCATT+TGG | + | chr1_4:8098126-8098145 | None:intergenic | 65.0% | |
| CCAAATGGGCCCCAAGTGGC+TGG | - | chr1_4:8098123-8098142 | Msa0147970:CDS | 65.0% | |
| GTGGGCGAAACTCCCGCTCA+GGG | + | chr1_4:8098617-8098636 | None:intergenic | 65.0% | |
| TGTGGGCGAAACTCCCGCTC+AGG | + | chr1_4:8098618-8098637 | None:intergenic | 65.0% | |
| AGCGGGAGTTTCGCCCACAG+TGG | - | chr1_4:8098619-8098638 | Msa0147970:CDS | 65.0% | |
| GCGGGAGTTTCGCCCACAGT+GGG | - | chr1_4:8098620-8098639 | Msa0147970:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 8097550 | 8100173 | 8097550 | ID=Msa0147970;Name=Msa0147970 |
| chr1_4 | mRNA | 8097550 | 8100173 | 8097550 | ID=Msa0147970-mRNA-1;Parent=Msa0147970;Name=Msa0147970-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.5|0.66|1|1|1|3|408|481 |
| chr1_4 | exon | 8097550 | 8098157 | 8097550 | ID=Msa0147970-mRNA-1:exon:3515;Parent=Msa0147970-mRNA-1 |
| chr1_4 | exon | 8098541 | 8099714 | 8098541 | ID=Msa0147970-mRNA-1:exon:3514;Parent=Msa0147970-mRNA-1 |
| chr1_4 | exon | 8100102 | 8100173 | 8100102 | ID=Msa0147970-mRNA-1:exon:3513;Parent=Msa0147970-mRNA-1 |
| chr1_4 | CDS | 8100102 | 8100173 | 8100102 | ID=Msa0147970-mRNA-1:cds;Parent=Msa0147970-mRNA-1 |
| chr1_4 | CDS | 8098541 | 8099714 | 8098541 | ID=Msa0147970-mRNA-1:cds;Parent=Msa0147970-mRNA-1 |
| chr1_4 | CDS | 8097958 | 8098157 | 8097958 | ID=Msa0147970-mRNA-1:cds;Parent=Msa0147970-mRNA-1 |
| chr1_4 | three_prime_UTR | 8097550 | 8097957 | 8097550 | ID=Msa0147970-mRNA-1:three_prime_utr;Parent=Msa0147970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
