AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1074350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1074350 MtrunA17_Chr7g0257591 98.551 414 6 0 1 414 1 414 0.0 840
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1074350 AT2G19560.1 76.087 414 98 1 1 414 1 413 0.0 642
Msa1074350 AT2G19560.2 80.573 314 60 1 101 414 2 314 0.0 522

Find 100 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATTCAAGATTTACTTTA+AGG 0.080216 7_2:-72124019 Msa1074350:intron
ACGTTGTTGCTTATGAAATT+AGG 0.153786 7_2:-72125210 Msa1074350:CDS
CGTTGTTGCTTATGAAATTA+GGG 0.224210 7_2:-72125209 Msa1074350:CDS
GACCCTTTCCCCAAGTTAAA+TGG 0.224511 7_2:-72121154 Msa1074350:CDS
GTTATAGGCTTCAACGAAAT+TGG 0.231468 7_2:+72125400 None:intergenic
ATATTGTACAAGCTCTAAAA+AGG 0.257192 7_2:-72121806 Msa1074350:CDS
TTGTTCAGGAATTTCGTAAT+TGG 0.261819 7_2:-72125261 Msa1074350:CDS
TTGATTGTATTCCAGGTAAA+AGG 0.270860 7_2:-72124078 Msa1074350:intron
ATTCTAACCTTGTCTCTATT+AGG 0.271778 7_2:+72123743 None:intergenic
ACCAGAATTAAACCTTATAT+TGG 0.293079 7_2:+72123206 None:intergenic
TAATAACTTAAACAAATTAC+AGG 0.345456 7_2:+72120733 None:intergenic
AACAGCATGAAGCCAATATA+AGG 0.349869 7_2:-72123218 Msa1074350:intron
TTCACTTGGTGAGCTCTGCT+TGG 0.357084 7_2:+72121443 None:intergenic
AAATTCCTCAAAATCAAATA+TGG 0.357145 7_2:+72123766 None:intergenic
ATTTGAGAGAGATGCCGTTT+TGG 0.366232 7_2:+72125585 None:intergenic
GGAGAAACGGTTGAGGTATT+CGG 0.366603 7_2:+72125622 None:intergenic
TTTAACAACAAGAACACATT+CGG 0.370856 7_2:+72120991 None:intergenic
GGAAAACCTGTCAATTCATA+AGG 0.378369 7_2:-72121133 Msa1074350:exon
CACCTCGAAATTTAGAATCA+TGG 0.378473 7_2:+72121096 None:intergenic
TGGTTTAGTTTCCACTTGTA+TGG 0.384486 7_2:-72120892 Msa1074350:three_prime_UTR
TGTTCAGGAATTTCGTAATT+GGG 0.401599 7_2:-72125260 Msa1074350:CDS
AATTAGGGTTCTTGCTGAAA+AGG 0.406313 7_2:-72125194 Msa1074350:intron
AAGATTCTTGTGTATCAGTA+TGG 0.406611 7_2:+72121228 None:intergenic
TCACTTGGTGAGCTCTGCTT+GGG 0.406925 7_2:+72121444 None:intergenic
TCACTAGTGAACCACATGTT+AGG 0.410487 7_2:+72120759 None:intergenic
TTAACAACAAGAACACATTC+GGG 0.415211 7_2:+72120992 None:intergenic
TTCCATTTAACTTGGGGAAA+GGG 0.416354 7_2:+72121152 None:intergenic
AGAGAGAAGGAAGTGGGAGT+TGG 0.416612 7_2:+72125544 None:intergenic
ATTCCAGTGAAGCTTTCAAT+AGG 0.418462 7_2:-72122718 Msa1074350:CDS
CTTCTCCAAGAGCCTGTGAT+TGG 0.422456 7_2:+72122687 None:intergenic
CAGAGCTCACCAAGTGAAGT+TGG 0.425381 7_2:-72121438 Msa1074350:CDS
ACATCTTCTTTACTAATCTC+TGG 0.429870 7_2:+72121595 None:intergenic
GACAGACAATTGGCAGCAAA+TGG 0.434588 7_2:-72124875 Msa1074350:CDS
CTGTTGGTTGCAATGCTTCA+AGG 0.445629 7_2:+72123236 None:intergenic
CCAGCACCTTTCAACTTCTC+AGG 0.448793 7_2:+72124845 None:intergenic
CAAGAAAGCCTGGCAATAGC+AGG 0.449826 7_2:-72121073 Msa1074350:three_prime_UTR
ATGCCTATTGAAAGCTTCAC+TGG 0.454323 7_2:+72122715 None:intergenic
TTCTCCAAGAGCCTGTGATT+GGG 0.457016 7_2:+72122688 None:intergenic
CCAGTCCCTTATGAATTGAC+AGG 0.461898 7_2:+72121127 None:intergenic
GTCACTTACATGTACTATAC+TGG 0.463654 7_2:-72123622 Msa1074350:CDS
TGAAAGGGTTCTTCGGCCAT+AGG 0.467348 7_2:-72121041 Msa1074350:three_prime_UTR
CAATAACCTCCAACTTCACT+TGG 0.472911 7_2:+72121429 None:intergenic
GGGGCGATCCTCAACTTCTT+CGG 0.477985 7_2:-72121785 Msa1074350:CDS
AAGCTGATTAAACATTATGA+TGG 0.483635 7_2:+72120702 None:intergenic
TTATTGTTAAAGCATTGAAA+TGG 0.486233 7_2:-72121412 Msa1074350:CDS
CTTGAAGTTCTACCTTCTCT+AGG 0.487820 7_2:+72121622 None:intergenic
CCTGAGAAGTTGAAAGGTGC+TGG 0.489843 7_2:-72124845 Msa1074350:CDS
TTATATTGGCTTCATGCTGT+TGG 0.491818 7_2:+72123220 None:intergenic
TCAAACTTCAAAAGTGAAAG+TGG 0.494508 7_2:+72125709 None:intergenic
TATTCTTGCAATTTAGATTG+TGG 0.494659 7_2:-72120912 Msa1074350:three_prime_UTR
TGTTGAAGTGATCGGAAAAG+AGG 0.496197 7_2:+72125434 None:intergenic
ATTGCCCAATCACAGGCTCT+TGG 0.498484 7_2:-72122692 Msa1074350:CDS
TTTGCAGGTAGAGTGTATAA+TGG 0.498834 7_2:-72121251 Msa1074350:intron
GAAAACCTGTCAATTCATAA+GGG 0.502412 7_2:-72121132 Msa1074350:exon
ATAAGGGCTACCAGTGGAAG+TGG 0.502554 7_2:-72120858 Msa1074350:three_prime_UTR
ACCTCGAAATTTAGAATCAT+GGG 0.503168 7_2:+72121097 None:intergenic
TTCTTATTATACTGCGGCAA+AGG 0.505154 7_2:+72123807 None:intergenic
TTTCGAGGTGCAAGAAAGCC+TGG 0.509157 7_2:-72121083 Msa1074350:three_prime_UTR
ACCCATGATTCTAAATTTCG+AGG 0.511437 7_2:-72121098 Msa1074350:three_prime_UTR
AAAATTACCCTGCTATTGCC+AGG 0.512201 7_2:+72121065 None:intergenic
TTTCCATTTAACTTGGGGAA+AGG 0.515780 7_2:+72121151 None:intergenic
GTTGCAATGCTTCAAGGCAT+AGG 0.517547 7_2:+72123242 None:intergenic
GTTTATAGTGTTGAAGTGAT+CGG 0.519681 7_2:+72125426 None:intergenic
CCTGTCAATTCATAAGGGAC+TGG 0.532709 7_2:-72121127 Msa1074350:exon
AACAATGGCGTATTTGAGCA+TGG 0.533509 7_2:-72125666 Msa1074350:exon
ATGAAACGGCGTCGGAGAAA+CGG 0.534306 7_2:+72125609 None:intergenic
CATTCAATACAACAAACCTA+TGG 0.536093 7_2:+72121025 None:intergenic
TCAGTGATTTCCACTTCCAC+TGG 0.541890 7_2:+72120848 None:intergenic
CGGCGAGAGAGAGAAGGAAG+TGG 0.544385 7_2:+72125537 None:intergenic
CACTTCAATATCACGAGGAC+TGG 0.548396 7_2:-72121758 Msa1074350:intron
AAAACATACAACCATACAAG+TGG 0.554205 7_2:+72120881 None:intergenic
AATTGACATGGATGTGGATG+AGG 0.555159 7_2:-72121384 Msa1074350:intron
TAGGCATATTGCCCAATCAC+AGG 0.563533 7_2:-72122699 Msa1074350:CDS
GCTTGAAATTGACATGGATG+TGG 0.568571 7_2:-72121390 Msa1074350:CDS
GTAAAAGGTGCTAAGCGTGT+TGG 0.576657 7_2:-72124063 Msa1074350:CDS
GGCGAGAGAGAGAAGGAAGT+GGG 0.582230 7_2:+72125538 None:intergenic
CAATACTTCTTATTATACTG+CGG 0.586087 7_2:+72123801 None:intergenic
ACAATGGCGTATTTGAGCAT+GGG 0.590947 7_2:-72125665 Msa1074350:CDS
AAATCTCCTGAGAAGTTGAA+AGG 0.593067 7_2:-72124851 Msa1074350:CDS
CGGCGTCGGAGAAACGGTTG+AGG 0.594594 7_2:+72125615 None:intergenic
AGTGCAGACCGAAGAAGTTG+AGG 0.599498 7_2:+72121777 None:intergenic
CTTTGCCCACAAAAGCAAAG+TGG 0.605507 7_2:-72121194 Msa1074350:CDS
AGCTCACCAAGTGAAGTTGG+AGG 0.610041 7_2:-72121435 Msa1074350:CDS
GAGCGTCGGCGAGAGAGAGA+AGG 0.610417 7_2:+72125531 None:intergenic
TGTATATCTTGTCCTAGAGA+AGG 0.611998 7_2:-72121634 Msa1074350:CDS
ATACACAAGAATCTTGTGAA+AGG 0.613044 7_2:-72121220 Msa1074350:CDS
GTCGATTGAAGTCGTTGACG+AGG 0.613533 7_2:+72125504 None:intergenic
GACGCCGTTTCATACCAAAA+CGG 0.616324 7_2:-72125599 Msa1074350:CDS
TTCGTAATTGGGAATCCGCG+TGG 0.623906 7_2:-72125249 Msa1074350:CDS
CTTTCTTCGAAGATCAACAA+TGG 0.631214 7_2:-72125681 Msa1074350:intron
GGAGAAGTACAATCTACTTG+AGG 0.637346 7_2:-72122671 Msa1074350:intron
AAGAAAGCCTGGCAATAGCA+GGG 0.645256 7_2:-72121072 Msa1074350:three_prime_UTR
TACAGCTTCAAGAGCCCACG+CGG 0.650017 7_2:+72125234 None:intergenic
GGAATTTCCTAATAGAGACA+AGG 0.655538 7_2:-72123750 Msa1074350:intron
GTTGACGAGGATGAGAGCGT+CGG 0.661085 7_2:+72125517 None:intergenic
TAACAACAAGAACACATTCG+GGG 0.668941 7_2:+72120993 None:intergenic
AACAACAAGAACACATTCGG+GGG 0.669743 7_2:+72120994 None:intergenic
GAAATGGCTTGAAATTGACA+TGG 0.673583 7_2:-72121396 Msa1074350:CDS
GTCTGCACTTCAATATCACG+AGG 0.692123 7_2:-72121763 Msa1074350:CDS
ACTACTGAGAACCTAACATG+TGG 0.713877 7_2:-72120770 Msa1074350:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTAAAATTTTAAACAAAA+GGG + chr7_2:72124052-72124071 None:intergenic 10.0%
!!! ATTGTAAAATTTTAAACAAA+AGG + chr7_2:72124053-72124072 None:intergenic 10.0%
!!! TAAGTAATTATTTTTTCTTT+TGG - chr7_2:72124560-72124579 Msa1074350:intron 10.0%
!! TATCATAAAGATAAATCATA+TGG + chr7_2:72122750-72122769 None:intergenic 15.0%
!!! ATTTATACATTTATTTCTTC+TGG + chr7_2:72123951-72123970 None:intergenic 15.0%
!!! TGTAAAATTTTAAACAAAAG+GGG + chr7_2:72124051-72124070 None:intergenic 15.0%
!! TCTTAGCAAATTAAAAAAAA+GGG + chr7_2:72124359-72124378 None:intergenic 15.0%
!! TTCTTAGCAAATTAAAAAAA+AGG + chr7_2:72124360-72124379 None:intergenic 15.0%
!!! ATTGAATTCATATTTTTTGT+AGG - chr7_2:72124729-72124748 Msa1074350:intron 15.0%
!! ATCTTTCAAAAAACAAATAA+AGG - chr7_2:72125088-72125107 Msa1074350:intron 15.0%
!! TAATAACTTAAACAAATTAC+AGG + chr7_2:72125670-72125689 None:intergenic 15.0%
!!! TTTTATTGAAATTGAAGTCA+TGG - chr7_2:72121086-72121105 Msa1074350:three_prime_UTR 20.0%
!!! ATTGATTCTAATTTGAAACT+AGG - chr7_2:72121269-72121288 Msa1074350:intron 20.0%
!!! TCGTTTTCTTTTTTCATTTT+CGG - chr7_2:72121493-72121512 Msa1074350:intron 20.0%
!!! AAATCATTGACTGAAAATTT+GGG + chr7_2:72122074-72122093 None:intergenic 20.0%
!! GTTATTCAAGATTTACTTTA+AGG - chr7_2:72122381-72122400 Msa1074350:intron 20.0%
!! AAATTCCTCAAAATCAAATA+TGG + chr7_2:72122637-72122656 None:intergenic 20.0%
!! TTATCTTTATGATATGTTTC+AGG - chr7_2:72122756-72122775 Msa1074350:intron 20.0%
!! AAATTTAGATTACTTACAGA+AGG + chr7_2:72122832-72122851 None:intergenic 20.0%
!!! TGTATTTTTTCTTTTTTGAG+AGG - chr7_2:72122933-72122952 Msa1074350:intron 20.0%
!!! GTATTTTTTCTTTTTTGAGA+GGG - chr7_2:72122934-72122953 Msa1074350:intron 20.0%
!!! TATTTTTTCTTTTTTGAGAG+GGG - chr7_2:72122935-72122954 Msa1074350:intron 20.0%
!! ACAAATGTAAACTCTATAAA+TGG + chr7_2:72123112-72123131 None:intergenic 20.0%
!!! AAATGGAAGTATTTATTAGT+AGG - chr7_2:72123421-72123440 Msa1074350:intron 20.0%
!! AAATATTATATCACAAAGAG+TGG + chr7_2:72124078-72124097 None:intergenic 20.0%
!!! AGGTTTTGTTAAACTTTAAA+AGG + chr7_2:72124215-72124234 None:intergenic 20.0%
!!! TAACAAAACCTTTTTTATTG+TGG - chr7_2:72124224-72124243 Msa1074350:intron 20.0%
!!! TTTTAATTTGCTAAGAAGTT+TGG - chr7_2:72124363-72124382 Msa1074350:intron 20.0%
!!! TTATTGTTAAAGCATTGAAA+TGG - chr7_2:72124988-72125007 Msa1074350:intron 20.0%
!! GATATAAACAAATTGAAAGT+AGG + chr7_2:72125071-72125090 None:intergenic 20.0%
!!! TATGGTTGTATGTTTTATAA+GGG - chr7_2:72125526-72125545 Msa1074350:CDS 20.0%
! ATTCACACTCAAATAAAAGA+AGG + chr7_2:72121472-72121491 None:intergenic 25.0%
!!! CTTTTTTCATTTTCGGTTTT+AGG - chr7_2:72121500-72121519 Msa1074350:intron 25.0%
!! TCTTTACTCATGAAAGTTTT+TGG - chr7_2:72121579-72121598 Msa1074350:intron 25.0%
! CTTGGGTTTCAAATTAAAAT+AGG + chr7_2:72121636-72121655 None:intergenic 25.0%
!!! ATTTTAATTTGAAACCCAAG+TGG - chr7_2:72121636-72121655 Msa1074350:CDS 25.0%
! TTTGAAAAAGAGACCTAATT+GGG + chr7_2:72121761-72121780 None:intergenic 25.0%
!!! TTTTGAAAAAGAGACCTAAT+TGG + chr7_2:72121762-72121781 None:intergenic 25.0%
!! CAAATCATTGACTGAAAATT+TGG + chr7_2:72122075-72122094 None:intergenic 25.0%
!! CAAATTTTCAGTCAATGATT+TGG - chr7_2:72122073-72122092 Msa1074350:intron 25.0%
! CAATACTTCTTATTATACTG+CGG + chr7_2:72122602-72122621 None:intergenic 25.0%
!! TTTTCTATAATGTTACCTTC+TGG - chr7_2:72122958-72122977 Msa1074350:intron 25.0%
! TGCAAATAATTTAAACCAGA+AGG + chr7_2:72122976-72122995 None:intergenic 25.0%
! ACCAGAATTAAACCTTATAT+TGG + chr7_2:72123197-72123216 None:intergenic 25.0%
!!! TAGGAATGTTTTTTACTAGT+GGG - chr7_2:72123440-72123459 Msa1074350:intron 25.0%
!! TTGGATTTTGCAGTTTATAT+GGG + chr7_2:72123474-72123493 None:intergenic 25.0%
!! TTTGGATTTTGCAGTTTATA+TGG + chr7_2:72123475-72123494 None:intergenic 25.0%
! TTACTGATGAGATAAACAAT+TGG + chr7_2:72123569-72123588 None:intergenic 25.0%
!!! CTTAGTTTACTTTTATGACT+AGG - chr7_2:72123899-72123918 Msa1074350:intron 25.0%
!! AATTGGTAACATAAACATGA+TGG + chr7_2:72124138-72124157 None:intergenic 25.0%
! TAGCAAATTAAAAAAAAGGG+AGG + chr7_2:72124356-72124375 None:intergenic 25.0%
!!! TTTTTCAAAAATCAAGCACT+TGG - chr7_2:72124400-72124419 Msa1074350:intron 25.0%
! ATTAGCAGTATAAACAGAAA+CGG + chr7_2:72124441-72124460 None:intergenic 25.0%
!!! ATTTTTTCTTTTGGACAGTA+CGG - chr7_2:72124569-72124588 Msa1074350:intron 25.0%
!!! ATATTGTACAAGCTCTAAAA+AGG - chr7_2:72124594-72124613 Msa1074350:intron 25.0%
!!! TATTGTACAAGCTCTAAAAA+GGG - chr7_2:72124595-72124614 Msa1074350:intron 25.0%
! TTAATATTTGATGCATTTGC+AGG - chr7_2:72125134-72125153 Msa1074350:intron 25.0%
! TTTAACAACAAGAACACATT+CGG + chr7_2:72125412-72125431 None:intergenic 25.0%
! TATTCTTGCAATTTAGATTG+TGG - chr7_2:72125488-72125507 Msa1074350:CDS 25.0%
!! GTATGGTTGTATGTTTTATA+AGG - chr7_2:72125525-72125544 Msa1074350:CDS 25.0%
!!! ATTAACCTGTATTTTTAGCT+CGG - chr7_2:72125584-72125603 Msa1074350:CDS 25.0%
! AAGCTGATTAAACATTATGA+TGG + chr7_2:72125701-72125720 None:intergenic 25.0%
TCAAACTTCAAAAGTGAAAG+TGG + chr7_2:72120694-72120713 None:intergenic 30.0%
! GTTTATAGTGTTGAAGTGAT+CGG + chr7_2:72120977-72120996 None:intergenic 30.0%
AAAGAATGAATCATACTTGG+TGG + chr7_2:72121039-72121058 None:intergenic 30.0%
ACGAAAGAATGAATCATACT+TGG + chr7_2:72121042-72121061 None:intergenic 30.0%
!! AGTCATGGATTTTAATGTTG+TGG - chr7_2:72121101-72121120 Msa1074350:three_prime_UTR 30.0%
TTGTTCAGGAATTTCGTAAT+TGG - chr7_2:72121139-72121158 Msa1074350:CDS 30.0%
TGTTCAGGAATTTCGTAATT+GGG - chr7_2:72121140-72121159 Msa1074350:CDS 30.0%
! ACGTTGTTGCTTATGAAATT+AGG - chr7_2:72121190-72121209 Msa1074350:CDS 30.0%
! CGTTGTTGCTTATGAAATTA+GGG - chr7_2:72121191-72121210 Msa1074350:CDS 30.0%
CAAAATAATCTGAACCAAAC+AGG + chr7_2:72121241-72121260 None:intergenic 30.0%
AGTATGTTATGTTAGTAGCA+AGG + chr7_2:72121704-72121723 None:intergenic 30.0%
! TGGGAATCAACTTTGTTTAA+AGG + chr7_2:72121742-72121761 None:intergenic 30.0%
! AACAAAGTTGATTCCCAATT+AGG - chr7_2:72121745-72121764 Msa1074350:intron 30.0%
!! TACCACTGTTGATTTGTTTA+GGG - chr7_2:72121800-72121819 Msa1074350:CDS 30.0%
ATGCATGAATAGGCTAAAAT+TGG + chr7_2:72122099-72122118 None:intergenic 30.0%
! TCTTCTGCATACTTTTGTTA+AGG - chr7_2:72122160-72122179 Msa1074350:intron 30.0%
TACTTCCATGATTCATTAAG+TGG - chr7_2:72122251-72122270 Msa1074350:intron 30.0%
TTATAGCTTGATTGTATTCC+AGG - chr7_2:72122315-72122334 Msa1074350:intron 30.0%
TTGATTGTATTCCAGGTAAA+AGG - chr7_2:72122322-72122341 Msa1074350:intron 30.0%
!! GACAACCATATTTGATTTTG+AGG - chr7_2:72122629-72122648 Msa1074350:intron 30.0%
ATTCTAACCTTGTCTCTATT+AGG + chr7_2:72122660-72122679 None:intergenic 30.0%
! ATACAGTTTTCGTTTGAAAG+TGG + chr7_2:72123006-72123025 None:intergenic 30.0%
GCCAATATAAGGTTTAATTC+TGG - chr7_2:72123193-72123212 Msa1074350:intron 30.0%
TGCTTAGTGAATATTCTCTT+TGG - chr7_2:72123388-72123407 Msa1074350:intron 30.0%
!!! GTAGGAATGTTTTTTACTAG+TGG - chr7_2:72123439-72123458 Msa1074350:intron 30.0%
! TGGATTTTGCAGTTTATATG+GGG + chr7_2:72123473-72123492 None:intergenic 30.0%
ATCTCATTGTTCATCTATGA+AGG - chr7_2:72123537-72123556 Msa1074350:intron 30.0%
TCTCATTGTTCATCTATGAA+GGG - chr7_2:72123538-72123557 Msa1074350:intron 30.0%
!! AACCAGTTTTTGTTTGACAT+AGG - chr7_2:72123641-72123660 Msa1074350:intron 30.0%
ATCCTATGTCAAACAAAAAC+TGG + chr7_2:72123646-72123665 None:intergenic 30.0%
! TTATTTTCCACTCTCTCTAT+GGG - chr7_2:72123778-72123797 Msa1074350:CDS 30.0%
CTAGTTAATTGAGCGTTAAT+TGG + chr7_2:72124155-72124174 None:intergenic 30.0%
ACAGTAAAGTTGTTGTCATT+AGG - chr7_2:72124259-72124278 Msa1074350:intron 30.0%
AATTAAAAAAAAGGGAGGAC+CGG + chr7_2:72124351-72124370 None:intergenic 30.0%
TAAGAAGTTTGGCTATTCAA+AGG - chr7_2:72124374-72124393 Msa1074350:intron 30.0%
AAGAAGTTTGGCTATTCAAA+GGG - chr7_2:72124375-72124394 Msa1074350:intron 30.0%
CATAACAACCTGATTACATT+TGG - chr7_2:72124479-72124498 Msa1074350:intron 30.0%
ATCAACAACCAAATGTAATC+AGG + chr7_2:72124490-72124509 None:intergenic 30.0%
!! ATTGTACAAGCTCTAAAAAG+GGG - chr7_2:72124596-72124615 Msa1074350:intron 30.0%
TCCTCATAATGAAACAACAA+CGG + chr7_2:72124677-72124696 None:intergenic 30.0%
ACATCTTCTTTACTAATCTC+TGG + chr7_2:72124808-72124827 None:intergenic 30.0%
ATTGAAAGTAGGAAAGAATG+AGG + chr7_2:72125060-72125079 None:intergenic 30.0%
!! ACAGGTTTTCCATTTAACTT+GGG + chr7_2:72125258-72125277 None:intergenic 30.0%
GAAAACCTGTCAATTCATAA+GGG - chr7_2:72125268-72125287 Msa1074350:CDS 30.0%
! ACCTCGAAATTTAGAATCAT+GGG + chr7_2:72125306-72125325 None:intergenic 30.0%
! AATTTTGTGAAAGGGTTCTT+CGG - chr7_2:72125352-72125371 Msa1074350:intron 30.0%
CATTCAATACAACAAACCTA+TGG + chr7_2:72125378-72125397 None:intergenic 30.0%
TTAACAACAAGAACACATTC+GGG + chr7_2:72125411-72125430 None:intergenic 30.0%
AAAACATACAACCATACAAG+TGG + chr7_2:72125522-72125541 None:intergenic 30.0%
AATATCCGAGCTAAAAATAC+AGG + chr7_2:72125592-72125611 None:intergenic 30.0%
CTTTCTTCGAAGATCAACAA+TGG - chr7_2:72120719-72120738 Msa1074350:three_prime_UTR 35.0%
GTTATAGGCTTCAACGAAAT+TGG + chr7_2:72121003-72121022 None:intergenic 35.0%
!!! GGTTTTTTCGAAAGCGTTAT+AGG + chr7_2:72121018-72121037 None:intergenic 35.0%
! AATTTTCAGTGCGTTTGTTC+AGG - chr7_2:72121125-72121144 Msa1074350:exon 35.0%
AATTAGGGTTCTTGCTGAAA+AGG - chr7_2:72121206-72121225 Msa1074350:CDS 35.0%
CGAAACATAGAATACACGTT+TGG + chr7_2:72121312-72121331 None:intergenic 35.0%
! AATTTAAACCCCTCTAGAAG+TGG + chr7_2:72121337-72121356 None:intergenic 35.0%
!! CTTTGCTTTTGTCTCTAGAA+TGG - chr7_2:72121377-72121396 Msa1074350:intron 35.0%
! AATGGATTCTACTTGAAGCT+AGG - chr7_2:72121395-72121414 Msa1074350:CDS 35.0%
AAATCTCCTGAGAAGTTGAA+AGG - chr7_2:72121549-72121568 Msa1074350:intron 35.0%
GAAAATGTTTACATACCGCA+AGG + chr7_2:72121608-72121627 None:intergenic 35.0%
ACAGTGGTACGAAACTAAAT+TGG + chr7_2:72121789-72121808 None:intergenic 35.0%
!! GTACCACTGTTGATTTGTTT+AGG - chr7_2:72121799-72121818 Msa1074350:CDS 35.0%
!! AACTACTTTTGCCATATCTC+AGG + chr7_2:72121984-72122003 None:intergenic 35.0%
ACTTTAACAACAAGCTCAAC+AGG + chr7_2:72122036-72122055 None:intergenic 35.0%
CAAGTAGTACATGCATGAAT+AGG + chr7_2:72122109-72122128 None:intergenic 35.0%
ATTCATGCATGTACTACTTG+TGG - chr7_2:72122109-72122128 Msa1074350:intron 35.0%
CACAAAACAACACAAAGCTA+TGG + chr7_2:72122224-72122243 None:intergenic 35.0%
CACATCCACTTAATGAATCA+TGG + chr7_2:72122259-72122278 None:intergenic 35.0%
GTGTGAAATTTCACTTTCAG+AGG - chr7_2:72122276-72122295 Msa1074350:intron 35.0%
! TCTCATTTGTTGACATATGC+TGG - chr7_2:72122454-72122473 Msa1074350:intron 35.0%
! AGCTGCAAAACATTTGTTGA+TGG + chr7_2:72122561-72122580 None:intergenic 35.0%
! TCAACAAATGTTTTGCAGCT+TGG - chr7_2:72122561-72122580 Msa1074350:intron 35.0%
TTCTTATTATACTGCGGCAA+AGG + chr7_2:72122596-72122615 None:intergenic 35.0%
GGAATTTCCTAATAGAGACA+AGG - chr7_2:72122650-72122669 Msa1074350:intron 35.0%
GTCACTTACATGTACTATAC+TGG - chr7_2:72122778-72122797 Msa1074350:intron 35.0%
GTTTACATTTGTGACTTGAC+AGG - chr7_2:72123120-72123139 Msa1074350:intron 35.0%
!! TTATATTGGCTTCATGCTGT+TGG + chr7_2:72123183-72123202 None:intergenic 35.0%
AACAGCATGAAGCCAATATA+AGG - chr7_2:72123182-72123201 Msa1074350:intron 35.0%
! CATGAAGTGAGCTTTCTTTT+AGG - chr7_2:72123242-72123261 Msa1074350:CDS 35.0%
!! CAAATGCACGTTTAATTTGC+AGG + chr7_2:72123282-72123301 None:intergenic 35.0%
GCAAATTAAACGTGCATTTG+TGG - chr7_2:72123282-72123301 Msa1074350:intron 35.0%
ATTAAACGTGCATTTGTGGA+TGG - chr7_2:72123286-72123305 Msa1074350:intron 35.0%
TTAAACGTGCATTTGTGGAT+GGG - chr7_2:72123287-72123306 Msa1074350:intron 35.0%
!! TCTTTGGTGCTAAGCAAAAA+TGG - chr7_2:72123404-72123423 Msa1074350:intron 35.0%
! GGATTTTGCAGTTTATATGG+GGG + chr7_2:72123472-72123491 None:intergenic 35.0%
TTTACTAGGGAAGGAAGATT+TGG + chr7_2:72123493-72123512 None:intergenic 35.0%
CAGAAGGACAGAGTTAAATA+TGG + chr7_2:72123608-72123627 None:intergenic 35.0%
ATTCCAGTGAAGCTTTCAAT+AGG - chr7_2:72123682-72123701 Msa1074350:intron 35.0%
ACAATCTACTTGAGGTATGT+TGG - chr7_2:72123737-72123756 Msa1074350:intron 35.0%
CAATCTACTTGAGGTATGTT+GGG - chr7_2:72123738-72123757 Msa1074350:intron 35.0%
!! GTTATTTTCCACTCTCTCTA+TGG - chr7_2:72123777-72123796 Msa1074350:CDS 35.0%
! TATTTTCCACTCTCTCTATG+GGG - chr7_2:72123779-72123798 Msa1074350:CDS 35.0%
!!! GTAAACCTTTTAGAGCTTGT+AGG - chr7_2:72123842-72123861 Msa1074350:intron 35.0%
AAACTAAGTTACTGCTCAGA+CGG + chr7_2:72123887-72123906 None:intergenic 35.0%
! TTTTCCAAGTGCCAATTTGT+AGG - chr7_2:72123987-72124006 Msa1074350:intron 35.0%
! TTTTCCCATAAGTGTCTGAT+GGG - chr7_2:72124013-72124032 Msa1074350:intron 35.0%
! TTTTAAACAAAAGGGGCGAA+GGG + chr7_2:72124044-72124063 None:intergenic 35.0%
! ATTTTAAACAAAAGGGGCGA+AGG + chr7_2:72124045-72124064 None:intergenic 35.0%
TGGACATTATCAGTAATGAG+AGG + chr7_2:72124118-72124137 None:intergenic 35.0%
TACTTATAGAGACATTTCCG+AGG + chr7_2:72124546-72124565 None:intergenic 35.0%
CCTCATAATGAAACAACAAC+GGG + chr7_2:72124676-72124695 None:intergenic 35.0%
! TTTTGTAGGTTCTTGAGATC+AGG - chr7_2:72124743-72124762 Msa1074350:intron 35.0%
TGTATATCTTGTCCTAGAGA+AGG - chr7_2:72124766-72124785 Msa1074350:intron 35.0%
TAATACACATCGAAAAGGAG+GGG + chr7_2:72124862-72124881 None:intergenic 35.0%
CTAATACACATCGAAAAGGA+GGG + chr7_2:72124863-72124882 None:intergenic 35.0%
ACAGCTAATACACATCGAAA+AGG + chr7_2:72124867-72124886 None:intergenic 35.0%
GAAATGGCTTGAAATTGACA+TGG - chr7_2:72125004-72125023 Msa1074350:intron 35.0%
TTTGCAGGTAGAGTGTATAA+TGG - chr7_2:72125149-72125168 Msa1074350:intron 35.0%
!! TTCCATTTAACTTGGGGAAA+GGG + chr7_2:72125251-72125270 None:intergenic 35.0%
!! TTTCCATTTAACTTGGGGAA+AGG + chr7_2:72125252-72125271 None:intergenic 35.0%
!!! CAGGTTTTCCATTTAACTTG+GGG + chr7_2:72125257-72125276 None:intergenic 35.0%
! GACAGGTTTTCCATTTAACT+TGG + chr7_2:72125259-72125278 None:intergenic 35.0%
GGAAAACCTGTCAATTCATA+AGG - chr7_2:72125267-72125286 Msa1074350:CDS 35.0%
ACCCATGATTCTAAATTTCG+AGG - chr7_2:72125302-72125321 Msa1074350:intron 35.0%
! CACCTCGAAATTTAGAATCA+TGG + chr7_2:72125307-72125326 None:intergenic 35.0%
! TAGCAGGGTAATTTTGTGAA+AGG - chr7_2:72125343-72125362 Msa1074350:intron 35.0%
! AGCAGGGTAATTTTGTGAAA+GGG - chr7_2:72125344-72125363 Msa1074350:intron 35.0%
TAACAACAAGAACACATTCG+GGG + chr7_2:72125410-72125429 None:intergenic 35.0%
! TGGTTTAGTTTCCACTTGTA+TGG - chr7_2:72125508-72125527 Msa1074350:CDS 35.0%
AACAATGGCGTATTTGAGCA+TGG - chr7_2:72120734-72120753 Msa1074350:three_prime_UTR 40.0%
ACAATGGCGTATTTGAGCAT+GGG - chr7_2:72120735-72120754 Msa1074350:three_prime_UTR 40.0%
!!! GATGCCGTTTTGGTATGAAA+CGG + chr7_2:72120808-72120827 None:intergenic 40.0%
!! ATTTGAGAGAGATGCCGTTT+TGG + chr7_2:72120818-72120837 None:intergenic 40.0%
TGTTGAAGTGATCGGAAAAG+AGG + chr7_2:72120969-72120988 None:intergenic 40.0%
! AAAGGTATGTTGTGCCTGTT+TGG - chr7_2:72121224-72121243 Msa1074350:CDS 40.0%
ATGTTTCGTTCCACTTCTAG+AGG - chr7_2:72121324-72121343 Msa1074350:intron 40.0%
TGTTTCGTTCCACTTCTAGA+GGG - chr7_2:72121325-72121344 Msa1074350:intron 40.0%
!! GTTTTAGGCTGACAGACAAT+TGG - chr7_2:72121515-72121534 Msa1074350:intron 40.0%
!!! GAAAGTTTTTGGCATCCTTG+CGG - chr7_2:72121590-72121609 Msa1074350:intron 40.0%
GACCCTAAACAAATCAACAG+TGG + chr7_2:72121805-72121824 None:intergenic 40.0%
CCTAGCAATGCTAAGCAATA+TGG + chr7_2:72121833-72121852 None:intergenic 40.0%
CCATATTGCTTAGCATTGCT+AGG - chr7_2:72121830-72121849 Msa1074350:intron 40.0%
CATTAGAAACCAATGGCATC+AGG + chr7_2:72121864-72121883 None:intergenic 40.0%
TTAACAACAAGCTCAACAGG+TGG + chr7_2:72122033-72122052 None:intergenic 40.0%
ATCTGAACTTGTAGCATCTC+AGG - chr7_2:72122482-72122501 Msa1074350:intron 40.0%
TCAGAACTCAGAACACAATC+AGG + chr7_2:72122874-72122893 None:intergenic 40.0%
TAAACGTGCATTTGTGGATG+GGG - chr7_2:72123288-72123307 Msa1074350:intron 40.0%
TTTGCAGTTTATATGGGGGT+TGG + chr7_2:72123468-72123487 None:intergenic 40.0%
ATCTTCCTTCCCTAGTAAAG+AGG - chr7_2:72123494-72123513 Msa1074350:intron 40.0%
GTTACAGATCGTCATACAGA+AGG + chr7_2:72123624-72123643 None:intergenic 40.0%
ATGCCTATTGAAAGCTTCAC+TGG + chr7_2:72123688-72123707 None:intergenic 40.0%
! GGAGAAGTACAATCTACTTG+AGG - chr7_2:72123729-72123748 Msa1074350:intron 40.0%
! ATTTTCCACTCTCTCTATGG+GGG - chr7_2:72123780-72123799 Msa1074350:CDS 40.0%
AGACGGAAACATAACTGAGT+TGG + chr7_2:72123870-72123889 None:intergenic 40.0%
! GTTTTCCCATAAGTGTCTGA+TGG - chr7_2:72124012-72124031 Msa1074350:intron 40.0%
GTATCCCATCAGACACTTAT+GGG + chr7_2:72124020-72124039 None:intergenic 40.0%
TGTATCCCATCAGACACTTA+TGG + chr7_2:72124021-72124040 None:intergenic 40.0%
! CCAAGGCACCACAATAAAAA+AGG + chr7_2:72124235-72124254 None:intergenic 40.0%
!!! CCTTTTTTATTGTGGTGCCT+TGG - chr7_2:72124232-72124251 Msa1074350:intron 40.0%
CATACAATACACCAGATGGT+TGG - chr7_2:72124285-72124304 Msa1074350:intron 40.0%
AATCAAGCACTTGGAGTTTG+AGG - chr7_2:72124409-72124428 Msa1074350:intron 40.0%
ATCAAGCACTTGGAGTTTGA+GGG - chr7_2:72124410-72124429 Msa1074350:intron 40.0%
AATTACAACCATGTGTGCCT+CGG - chr7_2:72124526-72124545 Msa1074350:intron 40.0%
!! CCCGTTGTTGTTTCATTATG+AGG - chr7_2:72124673-72124692 Msa1074350:intron 40.0%
!!! ATGCTCTCTAGAGCAACTTT+TGG + chr7_2:72124708-72124727 None:intergenic 40.0%
CTTGAAGTTCTACCTTCTCT+AGG + chr7_2:72124781-72124800 None:intergenic 40.0%
AATACACATCGAAAAGGAGG+GGG + chr7_2:72124861-72124880 None:intergenic 40.0%
GCTAATACACATCGAAAAGG+AGG + chr7_2:72124864-72124883 None:intergenic 40.0%
CAATAACCTCCAACTTCACT+TGG + chr7_2:72124974-72124993 None:intergenic 40.0%
GCTTGAAATTGACATGGATG+TGG - chr7_2:72125010-72125029 Msa1074350:intron 40.0%
AATTGACATGGATGTGGATG+AGG - chr7_2:72125016-72125035 Msa1074350:intron 40.0%
GAAAGTAGGAAAGAATGAGG+AGG + chr7_2:72125057-72125076 None:intergenic 40.0%
!! TACAGCCACTTTGCTTTTGT+GGG + chr7_2:72125214-72125233 None:intergenic 40.0%
!! ATACAGCCACTTTGCTTTTG+TGG + chr7_2:72125215-72125234 None:intergenic 40.0%
AAAATTACCCTGCTATTGCC+AGG + chr7_2:72125338-72125357 None:intergenic 40.0%
AACAACAAGAACACATTCGG+GGG + chr7_2:72125409-72125428 None:intergenic 40.0%
! TGTTTTATAAGGGCTACCAG+TGG - chr7_2:72125536-72125555 Msa1074350:CDS 40.0%
ACTACTGAGAACCTAACATG+TGG - chr7_2:72125630-72125649 Msa1074350:CDS 40.0%
TCACTAGTGAACCACATGTT+AGG + chr7_2:72125644-72125663 None:intergenic 40.0%
! GGAGAAACGGTTGAGGTATT+CGG + chr7_2:72120781-72120800 None:intergenic 45.0%
!! GTTTTGGTATGAAACGGCGT+CGG + chr7_2:72120802-72120821 None:intergenic 45.0%
GACGCCGTTTCATACCAAAA+CGG - chr7_2:72120801-72120820 Msa1074350:three_prime_UTR 45.0%
! GTTTCGTTCCACTTCTAGAG+GGG - chr7_2:72121326-72121345 Msa1074350:intron 45.0%
GACAGACAATTGGCAGCAAA+TGG - chr7_2:72121525-72121544 Msa1074350:intron 45.0%
GTGAATAAGCCTGATGCCAT+TGG - chr7_2:72121852-72121871 Msa1074350:intron 45.0%
! AGGGGTGCATTAGAAACCAA+TGG + chr7_2:72121871-72121890 None:intergenic 45.0%
!! TGACTTGTTGAGATCCCAGA+TGG - chr7_2:72121957-72121976 Msa1074350:intron 45.0%
!! GTAAAAGGTGCTAAGCGTGT+TGG - chr7_2:72122337-72122356 Msa1074350:intron 45.0%
TGCTCCGTTTGCTTTCCTAT+CGG - chr7_2:72122407-72122426 Msa1074350:intron 45.0%
ACTTTCTGTATGCTTCCTGC+TGG - chr7_2:72122895-72122914 Msa1074350:intron 45.0%
TAGAAAACTACGAAGCCAGC+AGG + chr7_2:72122913-72122932 None:intergenic 45.0%
GTTGCAATGCTTCAAGGCAT+AGG + chr7_2:72123161-72123180 None:intergenic 45.0%
! CTGTTGGTTGCAATGCTTCA+AGG + chr7_2:72123167-72123186 None:intergenic 45.0%
CTTCCCTAGTAAAGAGGACT+GGG - chr7_2:72123500-72123519 Msa1074350:intron 45.0%
GTTCCCAGTCCTCTTTACTA+GGG + chr7_2:72123506-72123525 None:intergenic 45.0%
TGTTCCCAGTCCTCTTTACT+AGG + chr7_2:72123507-72123526 None:intergenic 45.0%
TAGGCATATTGCCCAATCAC+AGG - chr7_2:72123701-72123720 Msa1074350:intron 45.0%
TTCTCCAAGAGCCTGTGATT+GGG + chr7_2:72123715-72123734 None:intergenic 45.0%
TGAGGTATGTTGGGTGCTTA+TGG - chr7_2:72123747-72123766 Msa1074350:intron 45.0%
GTATGTTGGGTGCTTATGGA+TGG - chr7_2:72123751-72123770 Msa1074350:CDS 45.0%
! TTTTCCACTCTCTCTATGGG+GGG - chr7_2:72123781-72123800 Msa1074350:CDS 45.0%
!! TGGCACCTACAAGCTCTAAA+AGG + chr7_2:72123850-72123869 None:intergenic 45.0%
TCCAAGTGCCAATTTGTAGG+CGG - chr7_2:72123990-72124009 Msa1074350:intron 45.0%
TGGGAAAACCGCCTACAAAT+TGG + chr7_2:72124001-72124020 None:intergenic 45.0%
ACAACTTTACTGTTGCGCCA+AGG + chr7_2:72124252-72124271 None:intergenic 45.0%
GCTGCATACAATACACCAGA+TGG - chr7_2:72124281-72124300 Msa1074350:intron 45.0%
CATACACAGGGTTTGGGAAT+GGG + chr7_2:72124312-72124331 None:intergenic 45.0%
ATTCCCAAACCCTGTGTATG+CGG - chr7_2:72124312-72124331 Msa1074350:intron 45.0%
GTCTGCACTTCAATATCACG+AGG - chr7_2:72124637-72124656 Msa1074350:intron 45.0%
CACTTCAATATCACGAGGAC+TGG - chr7_2:72124642-72124661 Msa1074350:intron 45.0%
ATACACATCGAAAAGGAGGG+GGG + chr7_2:72124860-72124879 None:intergenic 45.0%
CTTTGCCCACAAAAGCAAAG+TGG - chr7_2:72125206-72125225 Msa1074350:CDS 45.0%
GACCCTTTCCCCAAGTTAAA+TGG - chr7_2:72125246-72125265 Msa1074350:CDS 45.0%
CCAGTCCCTTATGAATTGAC+AGG + chr7_2:72125276-72125295 None:intergenic 45.0%
CCTGTCAATTCATAAGGGAC+TGG - chr7_2:72125273-72125292 Msa1074350:intron 45.0%
AAGAAAGCCTGGCAATAGCA+GGG - chr7_2:72125328-72125347 Msa1074350:intron 45.0%
TCAGTGATTTCCACTTCCAC+TGG + chr7_2:72125555-72125574 None:intergenic 45.0%
!! AAATAAATGTATAAATAAAA+AGG - chr7_2:72123955-72123974 Msa1074350:intron 5.0%
!! AATAAATGTATAAATAAAAA+GGG - chr7_2:72123956-72123975 Msa1074350:intron 5.0%
! ATGAAACGGCGTCGGAGAAA+CGG + chr7_2:72120794-72120813 None:intergenic 50.0%
AGAGAGAAGGAAGTGGGAGT+TGG + chr7_2:72120859-72120878 None:intergenic 50.0%
GTCGATTGAAGTCGTTGACG+AGG + chr7_2:72120899-72120918 None:intergenic 50.0%
TTCGTAATTGGGAATCCGCG+TGG - chr7_2:72121151-72121170 Msa1074350:CDS 50.0%
TCGTAATTGGGAATCCGCGT+GGG - chr7_2:72121152-72121171 Msa1074350:CDS 50.0%
CCAGCACCTTTCAACTTCTC+AGG + chr7_2:72121558-72121577 None:intergenic 50.0%
! CCTGAGAAGTTGAAAGGTGC+TGG - chr7_2:72121555-72121574 Msa1074350:intron 50.0%
TCCTTCGAGCGAAACCACTT+GGG + chr7_2:72121653-72121672 None:intergenic 50.0%
TCGCTCGAAGGAGTTTGAGA+AGG - chr7_2:72121661-72121680 Msa1074350:intron 50.0%
ACGCACAGAGTCACATAGCA+CGG - chr7_2:72121903-72121922 Msa1074350:intron 50.0%
TCCCAGATGGACCTGAGATA+TGG - chr7_2:72121970-72121989 Msa1074350:intron 50.0%
GCCATATCTCAGGTCCATCT+GGG + chr7_2:72121974-72121993 None:intergenic 50.0%
TGCCATATCTCAGGTCCATC+TGG + chr7_2:72121975-72121994 None:intergenic 50.0%
! CACGCTTAGCACCTTTTACC+TGG + chr7_2:72122336-72122355 None:intergenic 50.0%
GCTCCGTTTGCTTTCCTATC+GGG - chr7_2:72122408-72122427 Msa1074350:intron 50.0%
CTCCGTTTGCTTTCCTATCG+GGG - chr7_2:72122409-72122428 Msa1074350:intron 50.0%
TCCGTTTGCTTTCCTATCGG+GGG - chr7_2:72122410-72122429 Msa1074350:intron 50.0%
ACCCCCGATAGGAAAGCAAA+CGG + chr7_2:72122414-72122433 None:intergenic 50.0%
GAGTGCTATAAACCCCCGAT+AGG + chr7_2:72122425-72122444 None:intergenic 50.0%
CCAGTCCTCTTTACTAGGGA+AGG + chr7_2:72123502-72123521 None:intergenic 50.0%
CCTTCCCTAGTAAAGAGGAC+TGG - chr7_2:72123499-72123518 Msa1074350:intron 50.0%
ATTGCCCAATCACAGGCTCT+TGG - chr7_2:72123708-72123727 Msa1074350:intron 50.0%
CTTCTCCAAGAGCCTGTGAT+TGG + chr7_2:72123716-72123735 None:intergenic 50.0%
TTTCCACTCTCTCTATGGGG+GGG - chr7_2:72123782-72123801 Msa1074350:CDS 50.0%
ACCGCCTACAAATTGGCACT+TGG + chr7_2:72123994-72124013 None:intergenic 50.0%
GCATACACAGGGTTTGGGAA+TGG + chr7_2:72124313-72124332 None:intergenic 50.0%
TTCCCAAACCCTGTGTATGC+GGG - chr7_2:72124313-72124332 Msa1074350:intron 50.0%
CAAAAGCTCCCGCATACACA+GGG + chr7_2:72124324-72124343 None:intergenic 50.0%
ACAAAAGCTCCCGCATACAC+AGG + chr7_2:72124325-72124344 None:intergenic 50.0%
AGACATTTCCGAGGCACACA+TGG + chr7_2:72124537-72124556 None:intergenic 50.0%
AGTGCAGACCGAAGAAGTTG+AGG + chr7_2:72124626-72124645 None:intergenic 50.0%
TACACATCGAAAAGGAGGGG+GGG + chr7_2:72124859-72124878 None:intergenic 50.0%
! TCACTTGGTGAGCTCTGCTT+GGG + chr7_2:72124959-72124978 None:intergenic 50.0%
! TTCACTTGGTGAGCTCTGCT+TGG + chr7_2:72124960-72124979 None:intergenic 50.0%
CAGAGCTCACCAAGTGAAGT+TGG - chr7_2:72124962-72124981 Msa1074350:intron 50.0%
AGCTCACCAAGTGAAGTTGG+AGG - chr7_2:72124965-72124984 Msa1074350:intron 50.0%
TTTCGAGGTGCAAGAAAGCC+TGG - chr7_2:72125317-72125336 Msa1074350:intron 50.0%
CAAGAAAGCCTGGCAATAGC+AGG - chr7_2:72125327-72125346 Msa1074350:intron 50.0%
TGAAAGGGTTCTTCGGCCAT+AGG - chr7_2:72125359-72125378 Msa1074350:intron 50.0%
ATAAGGGCTACCAGTGGAAG+TGG - chr7_2:72125542-72125561 Msa1074350:CDS 50.0%
GGCGAGAGAGAGAAGGAAGT+GGG + chr7_2:72120865-72120884 None:intergenic 55.0%
! GTTGACGAGGATGAGAGCGT+CGG + chr7_2:72120886-72120905 None:intergenic 55.0%
TACAGCTTCAAGAGCCCACG+CGG + chr7_2:72121169-72121188 None:intergenic 55.0%
ACCCAAGTGGTTTCGCTCGA+AGG - chr7_2:72121649-72121668 Msa1074350:CDS 55.0%
CTCCTTCGAGCGAAACCACT+TGG + chr7_2:72121654-72121673 None:intergenic 55.0%
TGACTCTGTGCGTGTCTGTG+GGG + chr7_2:72121896-72121915 None:intergenic 55.0%
GTGACTCTGTGCGTGTCTGT+GGG + chr7_2:72121897-72121916 None:intergenic 55.0%
TGTGACTCTGTGCGTGTCTG+TGG + chr7_2:72121898-72121917 None:intergenic 55.0%
TGGGAATGGGTCCAACCATC+TGG + chr7_2:72124299-72124318 None:intergenic 55.0%
CTCCCGCATACACAGGGTTT+GGG + chr7_2:72124318-72124337 None:intergenic 55.0%
! ATGCGGGAGCTTTTGTGCAC+CGG - chr7_2:72124329-72124348 Msa1074350:intron 55.0%
GGGGCGATCCTCAACTTCTT+CGG - chr7_2:72124615-72124634 Msa1074350:intron 55.0%
ACACATCGAAAAGGAGGGGG+GGG + chr7_2:72124858-72124877 None:intergenic 55.0%
CGGCGAGAGAGAGAAGGAAG+TGG + chr7_2:72120866-72120885 None:intergenic 60.0%
ACTCTGTGCGTGTCTGTGGG+GGG + chr7_2:72121894-72121913 None:intergenic 60.0%
GACTCTGTGCGTGTCTGTGG+GGG + chr7_2:72121895-72121914 None:intergenic 60.0%
GTACCCCCCCATAGAGAGAG+TGG + chr7_2:72123788-72123807 None:intergenic 60.0%
GCTCCCGCATACACAGGGTT+TGG + chr7_2:72124319-72124338 None:intergenic 60.0%
ACATCGAAAAGGAGGGGGGG+GGG + chr7_2:72124856-72124875 None:intergenic 60.0%
CACATCGAAAAGGAGGGGGG+GGG + chr7_2:72124857-72124876 None:intergenic 60.0%
! CGGCGTCGGAGAAACGGTTG+AGG + chr7_2:72120788-72120807 None:intergenic 65.0%
!! GAGCGTCGGCGAGAGAGAGA+AGG + chr7_2:72120872-72120891 None:intergenic 65.0%
TGTGCGTGTCTGTGGGGGGA+GGG + chr7_2:72121890-72121909 None:intergenic 65.0%
ATCGAAAAGGAGGGGGGGGG+GGG + chr7_2:72124854-72124873 None:intergenic 65.0%
CATCGAAAAGGAGGGGGGGG+GGG + chr7_2:72124855-72124874 None:intergenic 65.0%
GTGCGTGTCTGTGGGGGGAG+GGG + chr7_2:72121889-72121908 None:intergenic 70.0%
CTGTGCGTGTCTGTGGGGGG+AGG + chr7_2:72121891-72121910 None:intergenic 70.0%
TCGAAAAGGAGGGGGGGGGG+GGG + chr7_2:72124853-72124872 None:intergenic 70.0%
GAAAAGGAGGGGGGGGGGGG+GGG + chr7_2:72124851-72124870 None:intergenic 75.0%
CGAAAAGGAGGGGGGGGGGG+GGG + chr7_2:72124852-72124871 None:intergenic 75.0%
! GGAGGGGGGGGGGGGGGGCA+AGG + chr7_2:72124846-72124865 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 72120684 72125738 72120684 ID=Msa1074350;Name=Msa1074350
chr7_2 mRNA 72120684 72125738 72120684 ID=Msa1074350-mRNA-1;Parent=Msa1074350;Name=Msa1074350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=31|1|1|1|0.91|0.84|13|451|414
chr7_2 exon 72120684 72121266 72120684 ID=Msa1074350-mRNA-1:exon:16568;Parent=Msa1074350-mRNA-1
chr7_2 exon 72121385 72121490 72121385 ID=Msa1074350-mRNA-1:exon:16567;Parent=Msa1074350-mRNA-1
chr7_2 exon 72121597 72121671 72121597 ID=Msa1074350-mRNA-1:exon:16566;Parent=Msa1074350-mRNA-1
chr7_2 exon 72121759 72121835 72121759 ID=Msa1074350-mRNA-1:exon:16565;Parent=Msa1074350-mRNA-1
chr7_2 exon 72122672 72122759 72122672 ID=Msa1074350-mRNA-1:exon:16564;Parent=Msa1074350-mRNA-1
chr7_2 exon 72123219 72123280 72123219 ID=Msa1074350-mRNA-1:exon:16563;Parent=Msa1074350-mRNA-1
chr7_2 exon 72123588 72123644 72123588 ID=Msa1074350-mRNA-1:exon:16562;Parent=Msa1074350-mRNA-1
chr7_2 exon 72123751 72123843 72123751 ID=Msa1074350-mRNA-1:exon:16561;Parent=Msa1074350-mRNA-1
chr7_2 exon 72124020 72124085 72124020 ID=Msa1074350-mRNA-1:exon:16560;Parent=Msa1074350-mRNA-1
chr7_2 exon 72124811 72124900 72124811 ID=Msa1074350-mRNA-1:exon:16559;Parent=Msa1074350-mRNA-1
chr7_2 exon 72125195 72125288 72125195 ID=Msa1074350-mRNA-1:exon:16558;Parent=Msa1074350-mRNA-1
chr7_2 exon 72125380 72125691 72125380 ID=Msa1074350-mRNA-1:exon:16557;Parent=Msa1074350-mRNA-1
chr7_2 exon 72125715 72125738 72125715 ID=Msa1074350-mRNA-1:exon:16556;Parent=Msa1074350-mRNA-1
chr7_2 five_prime_UTR 72125715 72125738 72125715 ID=Msa1074350-mRNA-1:five_prime_utr;Parent=Msa1074350-mRNA-1
chr7_2 five_prime_UTR 72125685 72125691 72125685 ID=Msa1074350-mRNA-1:five_prime_utr;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72125380 72125684 72125380 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72125195 72125288 72125195 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72124811 72124900 72124811 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72124020 72124085 72124020 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72123751 72123843 72123751 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72123588 72123644 72123588 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72123219 72123280 72123219 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72122672 72122759 72122672 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72121759 72121835 72121759 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72121597 72121671 72121597 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72121385 72121490 72121385 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 CDS 72121135 72121266 72121135 ID=Msa1074350-mRNA-1:cds;Parent=Msa1074350-mRNA-1
chr7_2 three_prime_UTR 72120684 72121134 72120684 ID=Msa1074350-mRNA-1:three_prime_utr;Parent=Msa1074350-mRNA-1
Gene Sequence

>Msa1074350

ATGGCGTATTTGAGCATGGGTGAAGCTCATAGAAGAATCACCGAATACCTCAACCGTTTCTCCGACGCCGTTTCATACCAAAACGGCATCTCTCTCAAATCTCTCTTCTCTCTCTCTTCCAACTCCCACTTCCTTCTCTCTCTCGCCGACGCTCTCATCCTCGTCAACGACTTCAATCGACTCATCAATCAAAACGATAACTACTCTCACTTCTCAGATATCATCTCTCCTCTTTTCCGATCACTTCAACACTATAAACAATCCAATTTCGTTGAAGCCTATAACGCTTTCGAAAAAACCACCAATGCGTTTGTTCAGGAATTTCGTAATTGGGAATCCGCGTGGGCTCTTGAAGCTGTATACGTTGTTGCTTATGAAATTAGGGTTCTTGCTGAAAAGGCTGACAGACAATTGGCAGCAAATGGAAAATCTCCTGAGAAGTTGAAAGGTGCTGGTTCTTTACTCATGAAAGTTTTTGGCATCCTTGCGGTAAAAGGTGCTAAGCGTGTTGGAGCATTGTATGTAACTTGTCAGTTATTCAAGATTTACTTTAAGCTTGGTACAGTTAACCTTTGCCGCAGTATAATAAGAAGTATTGAAACTGCGACAACCATATTTGATTTTGAGGAATTTCCTAATAGAGACAAGGTCACTTACATGTACTATACTGGTCGTCTCGAAGTTTTCAATGAAAATTTTCCTTCTGCTGACTATAAATTATCCTATGCCTTGAAGCATTGCAACCAACAGCATGAAGCCAATATAAGGATGATTCTTAAGTATCTGATTCCAGTGAAGCTTTCAATAGGCATATTGCCCAATCACAGGCTCTTGGAGAAGTACAATCTACTTGAGTACGGTAATATTGTACAAGCTCTAAAAAGGGGCGATCCTCAACTTCTTCGGTCTGCACTTCAATATCACGAGGACTGGTTCTTGAGATCAGGTGTATATCTTGTCCTAGAGAAGGTAGAACTTCAAGTATACCAGAGATTAGTAAAGAAGATTTACATCATTCAAAAGCAGAGAGACCCAAGCAGAGCTCACCAAGTGAAGTTGGAGGTTATTGTTAAAGCATTGAAATGGCTTGAAATTGACATGGATGTGGATGAGGTAGAGTGTATAATGGCCATACTGATACACAAGAATCTTGTGAAAGGTTACTTTGCCCACAAAAGCAAAGTGGCTGTATTGAGCAAGCAAGACCCTTTCCCCAAGTTAAATGGAAAACCTGTCAATTCATAA

Protein sequence

>Msa1074350

MAYLSMGEAHRRITEYLNRFSDAVSYQNGISLKSLFSLSSNSHFLLSLADALILVNDFNRLINQNDNYSHFSDIISPLFRSLQHYKQSNFVEAYNAFEKTTNAFVQEFRNWESAWALEAVYVVAYEIRVLAEKADRQLAANGKSPEKLKGAGSLLMKVFGILAVKGAKRVGALYVTCQLFKIYFKLGTVNLCRSIIRSIETATTIFDFEEFPNRDKVTYMYYTGRLEVFNENFPSADYKLSYALKHCNQQHEANIRMILKYLIPVKLSIGILPNHRLLEKYNLLEYGNIVQALKRGDPQLLRSALQYHEDWFLRSGVYLVLEKVELQVYQRLVKKIYIIQKQRDPSRAHQVKLEVIVKALKWLEIDMDVDEVECIMAILIHKNLVKGYFAHKSKVAVLSKQDPFPKLNGKPVNS*