Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0155720 | PNX93220.1 | 39.271 | 247 | 121 | 9 | 26 | 260 | 49 | 278 | 1.36e-22 | 118 |
| Msa0155720 | PNX93220.1 | 48.459 | 357 | 134 | 12 | 84 | 423 | 34 | 357 | 6.68e-64 | 249 |
| Msa0155720 | PNX93220.1 | 55.743 | 949 | 298 | 19 | 450 | 1354 | 110 | 980 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0155720 | A0A2K3MQY0 | 39.271 | 247 | 121 | 9 | 26 | 260 | 49 | 278 | 6.49e-23 | 118 |
| Msa0155720 | A0A2K3MQY0 | 48.459 | 357 | 134 | 12 | 84 | 423 | 34 | 357 | 3.19e-64 | 249 |
| Msa0155720 | A0A2K3MQY0 | 55.743 | 949 | 298 | 19 | 450 | 1354 | 110 | 980 | 0.0 | 865 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0155520 | Msa0155720 | 0.921507 | 3.274103e-88 | -8.615850e-47 |
| Msa0155720 | Msa0369790 | 0.807959 | 3.916792e-50 | -8.615850e-47 |
| Msa0155720 | Msa0401970 | 0.808036 | 3.771579e-50 | -8.615850e-47 |
| Msa0155720 | Msa0464000 | 0.810154 | 1.327151e-50 | -8.615850e-47 |
| Msa0155720 | Msa0509550 | 0.812942 | 3.288197e-51 | -8.615850e-47 |
| Msa0155720 | Msa0525920 | 0.824508 | 7.769378e-54 | -8.615850e-47 |
| Msa0155720 | Msa0528570 | 0.805502 | 1.294433e-49 | -8.615850e-47 |
| Msa0155720 | Msa1415540 | 0.801611 | 8.296800e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0155720 | MtrunA17_Chr1g0166291 | 86.256 | 211 | 26 | 2 | 1146 | 1354 | 1048 | 1257 | 1.11e-98 | 344 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 194 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCGAAAGCCTTAAGATTT+TGG | 0.090861 | 1_4:-21288804 | None:intergenic |
| AGAGAAACTGCTTCAATTTC+AGG | 0.144731 | 1_4:-21288292 | None:intergenic |
| ACTGCTTCTTGTTTATCTTT+TGG | 0.152263 | 1_4:-21283043 | None:intergenic |
| ACATATTCCTCTTTGGCTTT+TGG | 0.161328 | 1_4:-21285798 | None:intergenic |
| ACATCTTTGGACAAAGATTT+TGG | 0.164476 | 1_4:-21284262 | None:intergenic |
| CCGACAGCTGGAACGGTATT+TGG | 0.177666 | 1_4:+21288892 | Msa0155720:CDS |
| ATCACATGAGAAGCCGTTTA+TGG | 0.178791 | 1_4:+21283006 | None:intergenic |
| TATTCTTCCTGATTTATTAT+AGG | 0.195366 | 1_4:-21288481 | None:intergenic |
| AACAATTCAATATTTGTAAA+TGG | 0.218628 | 1_4:+21289130 | Msa0155720:CDS |
| CTCCTCAACATATTCCTCTT+TGG | 0.228265 | 1_4:-21285805 | None:intergenic |
| TTCTGACGAACAATCGATTC+TGG | 0.230258 | 1_4:+21286304 | Msa0155720:CDS |
| ATCATTACATAGGAAGATTC+TGG | 0.234517 | 1_4:-21288406 | None:intergenic |
| ACATCTTCCACTTCAGCTTT+TGG | 0.236572 | 1_4:-21284775 | None:intergenic |
| AGCTTTCTCTTCAACATCTT+TGG | 0.246330 | 1_4:-21284923 | None:intergenic |
| AGTTTCTCCTTGAACATATA+TGG | 0.253875 | 1_4:-21285223 | None:intergenic |
| ACATCTATATCATTGTTAAA+AGG | 0.272063 | 1_4:-21286254 | None:intergenic |
| CAAGTGATGTTTGGATTATC+AGG | 0.272548 | 1_4:-21289202 | None:intergenic |
| CATGTTCACTGGTATCTTCT+AGG | 0.288006 | 1_4:-21285467 | None:intergenic |
| ACCCAAAATCTTAAGGCTTT+CGG | 0.289769 | 1_4:+21288802 | Msa0155720:CDS |
| AGGATTTGGAAAATTGAGTA+TGG | 0.303766 | 1_4:+21284000 | Msa0155720:intron |
| ATCTTTGTCCAAAGATGTTA+TGG | 0.311605 | 1_4:+21284267 | Msa0155720:CDS |
| ATAGTTGCATCTTCAATATT+CGG | 0.314249 | 1_4:-21284817 | None:intergenic |
| GCTCGTGGCCGTGAAACTTT+TGG | 0.321564 | 1_4:-21288572 | None:intergenic |
| GAAAGCTACAATTGATTCAT+TGG | 0.324524 | 1_4:+21284939 | Msa0155720:CDS |
| GAAGCAGTTTCTCTTATTGC+AGG | 0.337221 | 1_4:+21288301 | Msa0155720:CDS |
| TGGAGAGAAAATAGTTACTA+TGG | 0.340326 | 1_4:+21289390 | Msa0155720:CDS |
| ACATATATGGCATTAGTAAA+AGG | 0.342779 | 1_4:-21285210 | None:intergenic |
| ACATCTTCAGATTCATCAAT+TGG | 0.346902 | 1_4:-21285009 | None:intergenic |
| TCAAGGAGAAACTGCAATCT+TGG | 0.351627 | 1_4:+21285233 | Msa0155720:CDS |
| ATTGAGTATGGGCAAAGAAA+TGG | 0.353064 | 1_4:+21284012 | Msa0155720:CDS |
| CCTTCGACTGATTCGGCATA+TGG | 0.360198 | 1_4:-21286682 | None:intergenic |
| TTGTTGTTGTTGCCAATACT+TGG | 0.362848 | 1_4:-21287609 | None:intergenic |
| CTATCCAGCCATTCACTTCA+AGG | 0.367802 | 1_4:+21287399 | Msa0155720:CDS |
| TCATGAAAGTGACGTAAATA+TGG | 0.370828 | 1_4:+21284738 | Msa0155720:CDS |
| CGAGCTTGAAAGTGATTCAT+TGG | 0.373757 | 1_4:+21284699 | Msa0155720:CDS |
| CATTTCAACCCAAAATCTTA+AGG | 0.374331 | 1_4:+21288795 | Msa0155720:CDS |
| ATATCTAAAGCTTCATTCAT+TGG | 0.375973 | 1_4:+21289430 | Msa0155720:CDS |
| TAATGAAAGTGAAATAAATA+TGG | 0.378007 | 1_4:+21284972 | Msa0155720:CDS |
| TCGATTCTGGGAAATTCATT+TGG | 0.378262 | 1_4:+21286317 | Msa0155720:CDS |
| CGATTCTTCTCGTCTTGATT+CGG | 0.381521 | 1_4:-21289266 | None:intergenic |
| AAGAAGCAATTGAGAAAGAA+AGG | 0.383115 | 1_4:+21289032 | Msa0155720:CDS |
| TCATGCAAGTGACATAAGTA+TGG | 0.389109 | 1_4:+21285761 | Msa0155720:CDS |
| AGCTTTCTTGTAACCATCAT+TGG | 0.389977 | 1_4:-21284410 | None:intergenic |
| CAAGGTTGAAAATGATTCAT+TGG | 0.390689 | 1_4:+21285998 | Msa0155720:CDS |
| TGAAAATGAGAATCAGCATT+TGG | 0.398342 | 1_4:-21287450 | None:intergenic |
| AAGCAGTATAGGAGCAATAA+TGG | 0.399852 | 1_4:+21283059 | Msa0155720:CDS |
| TGCATCTGACAAGTGATGTT+TGG | 0.400511 | 1_4:-21289211 | None:intergenic |
| GAATATTGAAGATGCAACTA+TGG | 0.402406 | 1_4:+21284819 | Msa0155720:CDS |
| ATCAAATGATTCAGAACTTC+AGG | 0.404723 | 1_4:+21287338 | Msa0155720:CDS |
| TGATTGAAGAGACTTCATTA+AGG | 0.408571 | 1_4:-21286813 | None:intergenic |
| GATATCACAGTAGGGTCTAA+TGG | 0.409358 | 1_4:+21288208 | Msa0155720:CDS |
| GCATGAAAGTGGTTATTCAT+TGG | 0.410863 | 1_4:+21285728 | Msa0155720:CDS |
| CAAATACCGTTCCAGCTGTC+GGG | 0.412049 | 1_4:-21288891 | None:intergenic |
| AACAATGATATAGATGTTCA+AGG | 0.412073 | 1_4:+21286260 | Msa0155720:CDS |
| GGCTTCTGATCATGATCCAT+TGG | 0.413024 | 1_4:+21285254 | Msa0155720:CDS |
| TATGGTGCCTATAATAAATC+AGG | 0.415770 | 1_4:+21288474 | Msa0155720:CDS |
| TACAAGAAGTTCACTTGAAA+AGG | 0.416160 | 1_4:+21285065 | Msa0155720:CDS |
| ACTAATGCCATATATGTTCA+AGG | 0.418629 | 1_4:+21285216 | Msa0155720:CDS |
| GAAAATAAATTGAGCGAAAG+TGG | 0.424067 | 1_4:+21288097 | Msa0155720:CDS |
| ACATCTTTGGCCTTATCCAT+TGG | 0.424419 | 1_4:-21284910 | None:intergenic |
| TTGAGTATGGGCAAAGAAAT+GGG | 0.424867 | 1_4:+21284013 | Msa0155720:CDS |
| AGATAAACAAGAAGCAGTAT+AGG | 0.424953 | 1_4:+21283048 | Msa0155720:CDS |
| TTGTCAAGTTCTTCAATTGA+AGG | 0.427408 | 1_4:+21286721 | Msa0155720:CDS |
| TCTGACGAACAATCGATTCT+GGG | 0.435765 | 1_4:+21286305 | Msa0155720:CDS |
| TACTGTGATATCATATGTAT+TGG | 0.436564 | 1_4:-21288197 | None:intergenic |
| GATACATGTTCAACCATAAA+CGG | 0.438611 | 1_4:-21283019 | None:intergenic |
| CATGATGAGTATGGTCTCAT+TGG | 0.441317 | 1_4:+21289370 | Msa0155720:CDS |
| GATGTTCAAGAGGAAGGTTC+AGG | 0.442410 | 1_4:+21284793 | Msa0155720:CDS |
| TAATGAAAGTGACATAGATA+TGG | 0.444720 | 1_4:+21286031 | Msa0155720:CDS |
| GTTTGAAAGTGATTATTCAT+TGG | 0.446746 | 1_4:+21284465 | Msa0155720:CDS |
| GAAGATGCAACAACTGAACT+TGG | 0.449085 | 1_4:+21285849 | Msa0155720:CDS |
| TCAAATGATTCCAATGGATA+AGG | 0.449088 | 1_4:+21284900 | Msa0155720:CDS |
| TAAGCAAGATCAATGCATAA+AGG | 0.450069 | 1_4:+21288147 | Msa0155720:CDS |
| AGAAGCAACTTCACTGATAG+TGG | 0.454090 | 1_4:+21289075 | Msa0155720:CDS |
| TCATGCAAGTGGTACAAGTA+TGG | 0.457580 | 1_4:+21284498 | Msa0155720:CDS |
| ACATCTTTGACCTCATCTGT+TGG | 0.458996 | 1_4:-21285933 | None:intergenic |
| CTTCTCGTCTTGATTCGGTT+CGG | 0.459344 | 1_4:-21289261 | None:intergenic |
| AAATGTGGTGTCCGGTCTCT+TGG | 0.461743 | 1_4:-21288777 | None:intergenic |
| TTTATAGGGGAAGAAATGAA+TGG | 0.463355 | 1_4:+21286637 | Msa0155720:intron |
| GCTCTCACCTTCGACTGATT+CGG | 0.464539 | 1_4:-21286689 | None:intergenic |
| TCTGCTCTACATTTCCCTGC+TGG | 0.469329 | 1_4:-21288549 | None:intergenic |
| GCCACGAGCATGCTTAAATC+AGG | 0.472448 | 1_4:+21288586 | Msa0155720:CDS |
| CGAATCAAGACGAGAAGAAT+CGG | 0.472470 | 1_4:+21289267 | Msa0155720:CDS |
| TGTTGTTGTTGCCAATACTT+GGG | 0.478593 | 1_4:-21287608 | None:intergenic |
| TGATCTTGCTTAGAATCTTG+TGG | 0.479810 | 1_4:-21288136 | None:intergenic |
| TATCTCATTTGCATGTTCAC+TGG | 0.480368 | 1_4:-21285478 | None:intergenic |
| GATGATCATGAAAGAGCTGC+AGG | 0.481251 | 1_4:+21286164 | Msa0155720:CDS |
| AGAGCAATGCCATTCTGATA+TGG | 0.481443 | 1_4:+21288456 | Msa0155720:CDS |
| GATGTTGAAGATAAAGCTAT+AGG | 0.483047 | 1_4:+21285951 | Msa0155720:CDS |
| TGTGCCACAATTGACAAGCT+TGG | 0.484968 | 1_4:+21288640 | Msa0155720:CDS |
| GGAAATTCATTTGGTGGTGA+AGG | 0.487139 | 1_4:+21286326 | Msa0155720:CDS |
| GATGTTGAGGAGAAATCTAT+AGG | 0.488422 | 1_4:+21286086 | Msa0155720:CDS |
| TGTAATGATAAAGAAATTTG+AGG | 0.491038 | 1_4:+21288420 | Msa0155720:CDS |
| TTGGGTTGAAATGTGGTGTC+CGG | 0.493063 | 1_4:-21288785 | None:intergenic |
| GTTGAAAATGATTCATTGGA+AGG | 0.494854 | 1_4:+21286002 | Msa0155720:CDS |
| TCAATAGCTGAAGCCAATGA+TGG | 0.495105 | 1_4:+21284397 | Msa0155720:CDS |
| AGAAGCAATTGAGAAAGAAA+GGG | 0.495359 | 1_4:+21289033 | Msa0155720:CDS |
| AGATGTTGAGGAGAAAGATA+CGG | 0.500407 | 1_4:+21285026 | Msa0155720:CDS |
| AAATTTCTTTATCATTACAT+AGG | 0.501919 | 1_4:-21288416 | None:intergenic |
| TCAGTGCCTCATGATGAGTA+TGG | 0.502689 | 1_4:+21289361 | Msa0155720:CDS |
| GTGTCATCTATTTCACCTAA+AGG | 0.502811 | 1_4:+21289541 | Msa0155720:CDS |
| GCTACAATTGATTCATTGGA+AGG | 0.508441 | 1_4:+21284943 | Msa0155720:CDS |
| CCAACATCCTCTTCAGCTGT+TGG | 0.508514 | 1_4:-21284535 | None:intergenic |
| CTTGAAAGTGATTCATTGGA+AGG | 0.509641 | 1_4:+21284703 | Msa0155720:CDS |
| GTCTGTGCCATGACTAGAAC+AGG | 0.509770 | 1_4:-21289478 | None:intergenic |
| TTTCTGAACCACCGAGAGAT+CGG | 0.510422 | 1_4:-21288840 | None:intergenic |
| TCTCGAGACTCCCCGACAGC+TGG | 0.512920 | 1_4:+21288880 | Msa0155720:CDS |
| GATGTTGAGGAGAAAGATAC+GGG | 0.513491 | 1_4:+21285027 | Msa0155720:CDS |
| ATATCACTAGAAATGTTTGA+AGG | 0.513580 | 1_4:-21285558 | None:intergenic |
| ATCATATGTATTGGCCATGT+CGG | 0.520487 | 1_4:-21288188 | None:intergenic |
| TTCTGAACCACCGAGAGATC+GGG | 0.520899 | 1_4:-21288839 | None:intergenic |
| ATTCTGGGAAATTCATTTGG+TGG | 0.521090 | 1_4:+21286320 | Msa0155720:CDS |
| GCATATCTATAAATACCAGC+AGG | 0.522867 | 1_4:+21288534 | Msa0155720:CDS |
| TTCACACTATATTGAAAGCA+AGG | 0.523062 | 1_4:+21285980 | Msa0155720:CDS |
| AATGCATCCAAAAGCTGAAG+TGG | 0.523497 | 1_4:+21284768 | Msa0155720:CDS |
| TGAGGAGAAAGCTATAGGAT+TGG | 0.523596 | 1_4:+21285821 | Msa0155720:CDS |
| GACATGGTGTCCCGATCTCT+CGG | 0.524228 | 1_4:+21288829 | Msa0155720:CDS |
| AATTCAATATTTGTAAATGG+TGG | 0.526172 | 1_4:+21289133 | Msa0155720:CDS |
| AATGCATCCAACAGCTGAAG+AGG | 0.532756 | 1_4:+21284528 | Msa0155720:CDS |
| CTCGTCTTGATTCGGTTCGG+AGG | 0.535593 | 1_4:-21289258 | None:intergenic |
| GGAGTCTCGAGAGCAACAAC+GGG | 0.536250 | 1_4:-21288869 | None:intergenic |
| AAAACAAGCATGCATGAAAG+TGG | 0.536308 | 1_4:+21285717 | Msa0155720:CDS |
| ATTGCCTTGAAGTGAATGGC+TGG | 0.536724 | 1_4:-21287403 | None:intergenic |
| CCAACAGCTGAAGAGGATGT+TGG | 0.537357 | 1_4:+21284535 | Msa0155720:CDS |
| TATGTTGAGGAGAAAGCTAT+AGG | 0.538789 | 1_4:+21285816 | Msa0155720:CDS |
| ATCCAGGATCACCAAGAGAC+CGG | 0.541341 | 1_4:+21288766 | Msa0155720:intron |
| CAACAATGGAGAAAATTTCA+AGG | 0.542664 | 1_4:+21287626 | Msa0155720:CDS |
| AGTGATATAACAATAGAACT+TGG | 0.543347 | 1_4:+21285573 | Msa0155720:CDS |
| ACTTGGAAAAGATATACAAC+AGG | 0.544735 | 1_4:+21284327 | Msa0155720:CDS |
| CGGAGGTTGAGATTGAAGCT+TGG | 0.544850 | 1_4:-21289241 | None:intergenic |
| AATACATATGATATCACAGT+AGG | 0.544931 | 1_4:+21288199 | Msa0155720:CDS |
| ATTCATTGCCTTGAAGTGAA+TGG | 0.546113 | 1_4:-21287407 | None:intergenic |
| AGAGCAGACCAAAAGTTTCA+CGG | 0.547609 | 1_4:+21288564 | Msa0155720:CDS |
| AAGAAGTTCACTTGAAAAGG+AGG | 0.547915 | 1_4:+21285068 | Msa0155720:CDS |
| CAAAAGTCAGATGGAAGAGA+TGG | 0.549084 | 1_4:+21287534 | Msa0155720:CDS |
| ATTGATTCATTGGAAGGAGA+TGG | 0.549518 | 1_4:+21284949 | Msa0155720:CDS |
| CCAAATACCGTTCCAGCTGT+CGG | 0.551035 | 1_4:-21288892 | None:intergenic |
| GAGAAGTCAAATGATTCCAA+TGG | 0.552359 | 1_4:+21284894 | Msa0155720:CDS |
| GATGATCATGAAATAACTGC+AGG | 0.553450 | 1_4:+21285105 | Msa0155720:CDS |
| CAGGAACCACAGAAGTATCA+AGG | 0.556349 | 1_4:-21288273 | None:intergenic |
| TAAATGGTGGTTATGAAACA+AGG | 0.558662 | 1_4:+21289146 | Msa0155720:CDS |
| ATTGTTTGAACTTAATTCAG+TGG | 0.559516 | 1_4:-21289113 | None:intergenic |
| ATGGCCAAGCTTGTCAATTG+TGG | 0.567580 | 1_4:-21288644 | None:intergenic |
| TCTTGATTGCACACATGACA+AGG | 0.567651 | 1_4:+21288339 | Msa0155720:CDS |
| AATTCATCCAAAAGCCAAAG+AGG | 0.568158 | 1_4:+21285791 | Msa0155720:CDS |
| GGATTTGGAAAATTGAGTAT+GGG | 0.570640 | 1_4:+21284001 | Msa0155720:intron |
| TGAGGAGAAATCTATAGGAA+TGG | 0.578126 | 1_4:+21286091 | Msa0155720:CDS |
| GGGAGTCTCGAGAGCAACAA+CGG | 0.580719 | 1_4:-21288870 | None:intergenic |
| TTATGTCCGCAAAAGTCAGA+TGG | 0.580735 | 1_4:+21287525 | Msa0155720:CDS |
| TAAGGCTTTCGGAGGAGACA+TGG | 0.581347 | 1_4:+21288813 | Msa0155720:CDS |
| TCTGAAGACTTATCAAGCAA+TGG | 0.583115 | 1_4:-21289298 | None:intergenic |
| TTCGTCAGAAGAAGCCAAGA+TGG | 0.583862 | 1_4:-21286291 | None:intergenic |
| AACAACACTTCTGCTATCAA+AGG | 0.584221 | 1_4:+21284040 | Msa0155720:CDS |
| AGAAGCTCCTGTTCTAGTCA+TGG | 0.584849 | 1_4:+21289471 | Msa0155720:CDS |
| TTATAGGCACCATATCAGAA+TGG | 0.585003 | 1_4:-21288465 | None:intergenic |
| GTGGAAGATGTTCAAGAGGA+AGG | 0.586720 | 1_4:+21284787 | Msa0155720:CDS |
| ACATCATTGGCCTCATCTGT+CGG | 0.587067 | 1_4:-21284634 | None:intergenic |
| AGATGATAGCTTGTCAAACA+AGG | 0.589755 | 1_4:+21289318 | Msa0155720:CDS |
| AGACTCCCCGACAGCTGGAA+CGG | 0.592227 | 1_4:+21288885 | Msa0155720:CDS |
| GCTGCAGGGTTGAGTTCTGA+TGG | 0.593083 | 1_4:+21286179 | Msa0155720:CDS |
| TAATGTCCTTGATACTTCTG+TGG | 0.593110 | 1_4:+21288267 | Msa0155720:CDS |
| AGCCAAAGAGGAATATGTTG+AGG | 0.593852 | 1_4:+21285803 | Msa0155720:CDS |
| GTTGTTGTTGCCAATACTTG+GGG | 0.597201 | 1_4:-21287607 | None:intergenic |
| TGAAGTGGAAGATGTTCAAG+AGG | 0.598165 | 1_4:+21284783 | Msa0155720:CDS |
| GGGTCTAATGGAGACTGCAA+TGG | 0.599019 | 1_4:+21288220 | Msa0155720:CDS |
| GCATCATGAGCATCTTCTTG+TGG | 0.606472 | 1_4:-21285606 | None:intergenic |
| AAATACCGTTCCAGCTGTCG+GGG | 0.609455 | 1_4:-21288890 | None:intergenic |
| TCGCTGCAAGAAGAAATTCA+CGG | 0.610643 | 1_4:+21284580 | Msa0155720:CDS |
| CAGACACAAGATAACAATGC+TGG | 0.612904 | 1_4:+21289496 | Msa0155720:CDS |
| GAAGAAGATGCTCATGCAAG+TGG | 0.614702 | 1_4:+21284487 | Msa0155720:CDS |
| TGATGAATCTGAAGATGTTG+AGG | 0.618336 | 1_4:+21285014 | Msa0155720:CDS |
| CAAAATCTTAAGGCTTTCGG+AGG | 0.622089 | 1_4:+21288805 | Msa0155720:CDS |
| TGATGAAGCTGAAGATGTTG+AGG | 0.624189 | 1_4:+21286073 | Msa0155720:CDS |
| GCTACGCGGTTTGATTCTAA+CGG | 0.628653 | 1_4:+21284430 | Msa0155720:CDS |
| CCATATGCCGAATCAGTCGA+AGG | 0.632461 | 1_4:+21286682 | Msa0155720:CDS |
| ACCTGATTTAAGCATGCTCG+TGG | 0.633778 | 1_4:-21288587 | None:intergenic |
| TCAAATGATTCCGACAGATG+AGG | 0.633934 | 1_4:+21284624 | Msa0155720:CDS |
| TGAGGAGAAAGATACGGGAA+TGG | 0.638620 | 1_4:+21285032 | Msa0155720:CDS |
| AGTATTGGCAACAACAACAA+TGG | 0.643813 | 1_4:+21287612 | Msa0155720:CDS |
| AAACAAGGGACAGTGTAACA+AGG | 0.644641 | 1_4:+21289161 | Msa0155720:CDS |
| CATATCTATAAATACCAGCA+GGG | 0.645811 | 1_4:+21288535 | Msa0155720:CDS |
| TCAGATGATTCCAACAGATG+AGG | 0.648461 | 1_4:+21285923 | Msa0155720:CDS |
| ATACATATGATATCACAGTA+GGG | 0.650083 | 1_4:+21288200 | Msa0155720:CDS |
| ATGAGACCATACTCATCATG+AGG | 0.664138 | 1_4:-21289367 | None:intergenic |
| ATGATCATGAAAGAGCTGCA+GGG | 0.664654 | 1_4:+21286165 | Msa0155720:CDS |
| TCAAGAGTACAAGTCCGACA+TGG | 0.668203 | 1_4:+21288174 | Msa0155720:CDS |
| CTTGATTGCACACATGACAA+GGG | 0.676782 | 1_4:+21288340 | Msa0155720:CDS |
| AAATGGTGGTTATGAAACAA+GGG | 0.678393 | 1_4:+21289147 | Msa0155720:CDS |
| GAAAAGAAAAGCGCAAATTG+CGG | 0.678461 | 1_4:+21289563 | Msa0155720:CDS |
| TTGTTGTTGCCAATACTTGG+GGG | 0.678840 | 1_4:-21287606 | None:intergenic |
| GAAGTCTCTTCAATCAAACA+AGG | 0.681501 | 1_4:+21286820 | Msa0155720:CDS |
| CGAGCATGCTTAAATCAGGT+AGG | 0.695668 | 1_4:+21288590 | Msa0155720:CDS |
| ATGGTGTCCCGATCTCTCGG+TGG | 0.717382 | 1_4:+21288832 | Msa0155720:CDS |
| ATGGTTACAAGAAAGCTACG+CGG | 0.827440 | 1_4:+21284416 | Msa0155720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAAGCATTTTAATA+AGG | + | chr1_4:21283360-21283379 | Msa0155720:intron | 10.0% |
| !!! | TATAATTTTTTGTTTAAACT+AGG | + | chr1_4:21287808-21287827 | Msa0155720:intron | 10.0% |
| !!! | ATTAATTTGTTTATCAAAAT+AGG | + | chr1_4:21288063-21288082 | Msa0155720:intron | 10.0% |
| !!! | TTAATTTGTTTATCAAAATA+GGG | + | chr1_4:21288064-21288083 | Msa0155720:intron | 10.0% |
| !!! | TATATGTTCAATTACTTTTA+AGG | + | chr1_4:21283509-21283528 | Msa0155720:intron | 15.0% |
| !! | AATAGTTCAAGATATATTAA+AGG | - | chr1_4:21283758-21283777 | None:intergenic | 15.0% |
| !!! | TTTATTTGTTATTTTTGTAG+AGG | + | chr1_4:21284147-21284166 | Msa0155720:intron | 15.0% |
| !!! | AATTTTTATATCACTAGAAA+TGG | - | chr1_4:21284305-21284324 | None:intergenic | 15.0% |
| !! | TAATGAAAGTGAAATAAATA+TGG | + | chr1_4:21284972-21284991 | Msa0155720:CDS | 15.0% |
| !!! | ATTAATTTTTCATTTTGTAG+AGG | + | chr1_4:21285410-21285429 | Msa0155720:intron | 15.0% |
| !! | AATGAGATAATAAATAGTTA+AGG | + | chr1_4:21286476-21286495 | Msa0155720:intron | 15.0% |
| !! | AAATTTCTTTATCATTACAT+AGG | - | chr1_4:21288419-21288438 | None:intergenic | 15.0% |
| !!! | TTTCATTTTTACTTTGTATT+TGG | + | chr1_4:21288687-21288706 | Msa0155720:intron | 15.0% |
| !!! | TTCATTTTTACTTTGTATTT+GGG | + | chr1_4:21288688-21288707 | Msa0155720:intron | 15.0% |
| !! | AACAATTCAATATTTGTAAA+TGG | + | chr1_4:21289130-21289149 | Msa0155720:CDS | 15.0% |
| !! | AATATCATCATCAATAATCA+TGG | + | chr1_4:21283678-21283697 | Msa0155720:intron | 20.0% |
| !! | AGTGATATAAAAATTGAACT+TGG | + | chr1_4:21284310-21284329 | Msa0155720:CDS | 20.0% |
| !!! | AAAGAATTTTTCAAATCCAA+TGG | - | chr1_4:21285273-21285292 | None:intergenic | 20.0% |
| !! | ACATCTATATCATTGTTAAA+AGG | - | chr1_4:21286257-21286276 | None:intergenic | 20.0% |
| !!! | AGAAATTTTGTTACTTATGA+TGG | - | chr1_4:21286520-21286539 | None:intergenic | 20.0% |
| !! | TCATAAGTAACAAAATTTCT+TGG | + | chr1_4:21286520-21286539 | Msa0155720:intron | 20.0% |
| !!! | TATTTGTGATTCTGTTTTAT+AGG | + | chr1_4:21286622-21286641 | Msa0155720:intron | 20.0% |
| !!! | ATTTGTGATTCTGTTTTATA+GGG | + | chr1_4:21286623-21286642 | Msa0155720:intron | 20.0% |
| !! | ATGTTTCAACAATTAAATCT+AGG | - | chr1_4:21287179-21287198 | None:intergenic | 20.0% |
| !! | AACATCATTAGATTTCAATT+TGG | + | chr1_4:21287194-21287213 | Msa0155720:intron | 20.0% |
| !!! | TTTAATATAAGTTTTCCATG+AGG | - | chr1_4:21287943-21287962 | None:intergenic | 20.0% |
| !! | ATAAGAGGTTATGTATTATA+AGG | - | chr1_4:21288010-21288029 | None:intergenic | 20.0% |
| !! | TGTAATGATAAAGAAATTTG+AGG | + | chr1_4:21288420-21288439 | Msa0155720:CDS | 20.0% |
| !! | TATTCTTCCTGATTTATTAT+AGG | - | chr1_4:21288484-21288503 | None:intergenic | 20.0% |
| !! | TGTTAACAATTCAATCTATA+TGG | + | chr1_4:21288997-21289016 | Msa0155720:intron | 20.0% |
| !! | AATTCAATATTTGTAAATGG+TGG | + | chr1_4:21289133-21289152 | Msa0155720:CDS | 20.0% |
| !! | TCTTTTGTGTTTGCAAAAAA+GGG | + | chr1_4:21283124-21283143 | Msa0155720:intron | 25.0% |
| ! | TTAAATTATGGCATGAATGA+TGG | - | chr1_4:21283160-21283179 | None:intergenic | 25.0% |
| ! | ATCATTCATGCCATAATTTA+AGG | + | chr1_4:21283159-21283178 | Msa0155720:intron | 25.0% |
| ! | TCATTCATGCCATAATTTAA+GGG | + | chr1_4:21283160-21283179 | Msa0155720:intron | 25.0% |
| ! | AATTGAATGTAACATGTGTT+TGG | - | chr1_4:21283267-21283286 | None:intergenic | 25.0% |
| !! | TTTTAAATTAGCACAAGACA+CGG | - | chr1_4:21283349-21283368 | None:intergenic | 25.0% |
| ! | TTCTCAATAATCTAAGAGAA+TGG | - | chr1_4:21283450-21283469 | None:intergenic | 25.0% |
| ! | ATAAAGCAACACCATATTAT+TGG | + | chr1_4:21283575-21283594 | Msa0155720:intron | 25.0% |
| ! | TTTAACATTGCTTAAATTGC+AGG | + | chr1_4:21283980-21283999 | Msa0155720:intron | 25.0% |
| ! | TTTATTCAGCATTTCAACAA+TGG | - | chr1_4:21284074-21284093 | None:intergenic | 25.0% |
| !!! | ATGCTGAATAAAATTTGTTG+AGG | + | chr1_4:21284082-21284101 | Msa0155720:intron | 25.0% |
| ! | GTTTGAAAGTGATTATTCAT+TGG | + | chr1_4:21284465-21284484 | Msa0155720:CDS | 25.0% |
| !! | ATCTTTTTCTTCAACATCAT+TGG | - | chr1_4:21284650-21284669 | None:intergenic | 25.0% |
| ! | ATAGTTGCATCTTCAATATT+CGG | - | chr1_4:21284820-21284839 | None:intergenic | 25.0% |
| ! | ACATATATGGCATTAGTAAA+AGG | - | chr1_4:21285213-21285232 | None:intergenic | 25.0% |
| !! | GATTTGAAAAATTCTTTTGC+TGG | + | chr1_4:21285276-21285295 | Msa0155720:CDS | 25.0% |
| ! | ATATCACTAGAAATGTTTGA+AGG | - | chr1_4:21285561-21285580 | None:intergenic | 25.0% |
| ! | AGTGATATAACAATAGAACT+TGG | + | chr1_4:21285573-21285592 | Msa0155720:CDS | 25.0% |
| ! | TAATGAAAGTGACATAGATA+TGG | + | chr1_4:21286031-21286050 | Msa0155720:CDS | 25.0% |
| ! | GAAGATGAAGATAAAAATGA+TGG | + | chr1_4:21286218-21286237 | Msa0155720:CDS | 25.0% |
| ! | AACAATGATATAGATGTTCA+AGG | + | chr1_4:21286260-21286279 | Msa0155720:CDS | 25.0% |
| !! | ACTTATGATGGAATTTCTTT+CGG | - | chr1_4:21286508-21286527 | None:intergenic | 25.0% |
| !! | TTTGTGATTCTGTTTTATAG+GGG | + | chr1_4:21286624-21286643 | Msa0155720:intron | 25.0% |
| ! | ACTTATTCGAACTTATTTAC+TGG | + | chr1_4:21286928-21286947 | Msa0155720:intron | 25.0% |
| ! | TTCTATAAACTCTCAAGAAT+AGG | + | chr1_4:21287028-21287047 | Msa0155720:intron | 25.0% |
| !! | TTAATCTCTTTTCATTGTCT+TGG | + | chr1_4:21287257-21287276 | Msa0155720:intron | 25.0% |
| !! | TGGTTTTCTAAACTTAAAGA+TGG | - | chr1_4:21287899-21287918 | None:intergenic | 25.0% |
| ! | TACTGTGATATCATATGTAT+TGG | - | chr1_4:21288200-21288219 | None:intergenic | 25.0% |
| ! | AATACATATGATATCACAGT+AGG | + | chr1_4:21288199-21288218 | Msa0155720:CDS | 25.0% |
| ! | ATACATATGATATCACAGTA+GGG | + | chr1_4:21288200-21288219 | Msa0155720:CDS | 25.0% |
| ! | ATGTTGTTAGAAAGTAAACA+TGG | - | chr1_4:21288666-21288685 | None:intergenic | 25.0% |
| !! | ATTTTTACTTTGTATTTGGG+TGG | + | chr1_4:21288691-21288710 | Msa0155720:intron | 25.0% |
| ! | ATTGTTTGAACTTAATTCAG+TGG | - | chr1_4:21289116-21289135 | None:intergenic | 25.0% |
| !! | ATATCTAAAGCTTCATTCAT+TGG | + | chr1_4:21289430-21289449 | Msa0155720:CDS | 25.0% |
| GATACATGTTCAACCATAAA+CGG | - | chr1_4:21283022-21283041 | None:intergenic | 30.0% | |
| !! | TGCTTCTTGTTTATCTTTTG+GGG | - | chr1_4:21283044-21283063 | None:intergenic | 30.0% |
| !! | CTGCTTCTTGTTTATCTTTT+GGG | - | chr1_4:21283045-21283064 | None:intergenic | 30.0% |
| !! | ACTGCTTCTTGTTTATCTTT+TGG | - | chr1_4:21283046-21283065 | None:intergenic | 30.0% |
| AGATAAACAAGAAGCAGTAT+AGG | + | chr1_4:21283048-21283067 | Msa0155720:CDS | 30.0% | |
| CAAACACAAAAGAGAAAACT+TGG | - | chr1_4:21283117-21283136 | None:intergenic | 30.0% | |
| ! | CTCTTTTGTGTTTGCAAAAA+AGG | + | chr1_4:21283123-21283142 | Msa0155720:intron | 30.0% |
| AACCGAAAGTGAACATTATT+TGG | + | chr1_4:21283419-21283438 | Msa0155720:intron | 30.0% | |
| GACCAAATAATGTTCACTTT+CGG | - | chr1_4:21283424-21283443 | None:intergenic | 30.0% | |
| TATTGAGAATTCATGACCAA+AGG | + | chr1_4:21283461-21283480 | Msa0155720:intron | 30.0% | |
| ! | TTATGCATAAGCCTCATTTT+GGG | - | chr1_4:21283559-21283578 | None:intergenic | 30.0% |
| ! | TTTATGCATAAGCCTCATTT+TGG | - | chr1_4:21283560-21283579 | None:intergenic | 30.0% |
| GATTTGAACAGCCAATAATA+TGG | - | chr1_4:21283589-21283608 | None:intergenic | 30.0% | |
| CAAATCAAGTATAAACACTC+TGG | + | chr1_4:21283603-21283622 | Msa0155720:intron | 30.0% | |
| GTCCTCAAATGTTTAAATCT+AGG | + | chr1_4:21283647-21283666 | Msa0155720:intron | 30.0% | |
| CTCCTAGATTTAAACATTTG+AGG | - | chr1_4:21283652-21283671 | None:intergenic | 30.0% | |
| CATCATCAATAATCATGGTA+TGG | + | chr1_4:21283683-21283702 | Msa0155720:intron | 30.0% | |
| CAATAATCATGGTATGGTAA+TGG | + | chr1_4:21283689-21283708 | Msa0155720:intron | 30.0% | |
| TTGTTAAATAGCGACTATAG+AGG | + | chr1_4:21283876-21283895 | Msa0155720:intron | 30.0% | |
| TTTCAAAACGCAGAAAATAG+TGG | - | chr1_4:21283938-21283957 | None:intergenic | 30.0% | |
| ATTGCTTAAATTGCAGGATT+TGG | + | chr1_4:21283986-21284005 | Msa0155720:intron | 30.0% | |
| AGGATTTGGAAAATTGAGTA+TGG | + | chr1_4:21284000-21284019 | Msa0155720:intron | 30.0% | |
| GGATTTGGAAAATTGAGTAT+GGG | + | chr1_4:21284001-21284020 | Msa0155720:intron | 30.0% | |
| ! | ACATCTTTGGACAAAGATTT+TGG | - | chr1_4:21284265-21284284 | None:intergenic | 30.0% |
| ATCTTTGTCCAAAGATGTTA+TGG | + | chr1_4:21284267-21284286 | Msa0155720:CDS | 30.0% | |
| !! | AGCTTTTTCCATAACATCTT+TGG | - | chr1_4:21284278-21284297 | None:intergenic | 30.0% |
| ACTTGGAAAAGATATACAAC+AGG | + | chr1_4:21284327-21284346 | Msa0155720:CDS | 30.0% | |
| TCATGAAAGTGACGTAAATA+TGG | + | chr1_4:21284738-21284757 | Msa0155720:CDS | 30.0% | |
| GAATATTGAAGATGCAACTA+TGG | + | chr1_4:21284819-21284838 | Msa0155720:CDS | 30.0% | |
| TCAAATGATTCCAATGGATA+AGG | + | chr1_4:21284900-21284919 | Msa0155720:CDS | 30.0% | |
| ! | GAAAGCTACAATTGATTCAT+TGG | + | chr1_4:21284939-21284958 | Msa0155720:CDS | 30.0% |
| ACATCTTCAGATTCATCAAT+TGG | - | chr1_4:21285012-21285031 | None:intergenic | 30.0% | |
| TACAAGAAGTTCACTTGAAA+AGG | + | chr1_4:21285065-21285084 | Msa0155720:CDS | 30.0% | |
| ACTAATGCCATATATGTTCA+AGG | + | chr1_4:21285216-21285235 | Msa0155720:CDS | 30.0% | |
| AGTTTCTCCTTGAACATATA+TGG | - | chr1_4:21285226-21285245 | None:intergenic | 30.0% | |
| ! | AAAAATTCTTTTGCTGGTGA+AGG | + | chr1_4:21285282-21285301 | Msa0155720:CDS | 30.0% |
| !!! | AGCTTTTTCATAAGCATCAT+TGG | - | chr1_4:21285676-21285695 | None:intergenic | 30.0% |
| ATGCTTATGAAAAAGCTACA+TGG | + | chr1_4:21285679-21285698 | Msa0155720:CDS | 30.0% | |
| GATGTTGAAGATAAAGCTAT+AGG | + | chr1_4:21285951-21285970 | Msa0155720:CDS | 30.0% | |
| TTCACACTATATTGAAAGCA+AGG | + | chr1_4:21285980-21285999 | Msa0155720:CDS | 30.0% | |
| CAAGGTTGAAAATGATTCAT+TGG | + | chr1_4:21285998-21286017 | Msa0155720:CDS | 30.0% | |
| GTTGAAAATGATTCATTGGA+AGG | + | chr1_4:21286002-21286021 | Msa0155720:CDS | 30.0% | |
| !!! | TAGTTTTATTGATAAAGCCG+TGG | - | chr1_4:21286422-21286441 | None:intergenic | 30.0% |
| CATTCTATTCATTTCTCTCT+CGG | - | chr1_4:21286460-21286479 | None:intergenic | 30.0% | |
| ACAAAATTTCTTGGTTGTGT+TGG | + | chr1_4:21286529-21286548 | Msa0155720:intron | 30.0% | |
| TGTGTAAACGACAAGTAAAA+AGG | + | chr1_4:21286554-21286573 | Msa0155720:intron | 30.0% | |
| GACAAGTAAAAAGGAATGAA+GGG | + | chr1_4:21286563-21286582 | Msa0155720:intron | 30.0% | |
| TTTATAGGGGAAGAAATGAA+TGG | + | chr1_4:21286637-21286656 | Msa0155720:intron | 30.0% | |
| TTGTCAAGTTCTTCAATTGA+AGG | + | chr1_4:21286721-21286740 | Msa0155720:CDS | 30.0% | |
| TGATTGAAGAGACTTCATTA+AGG | - | chr1_4:21286816-21286835 | None:intergenic | 30.0% | |
| ATACTTGAAAGATTCCAGAT+CGG | + | chr1_4:21286889-21286908 | Msa0155720:intron | 30.0% | |
| AAGCATTTGTGAAACTGTTT+AGG | + | chr1_4:21286954-21286973 | Msa0155720:intron | 30.0% | |
| ! | CAATTAAATCTAGGCTTGTT+TGG | - | chr1_4:21287170-21287189 | None:intergenic | 30.0% |
| ATCAAATGATTCAGAACTTC+AGG | + | chr1_4:21287338-21287357 | Msa0155720:CDS | 30.0% | |
| TGAAAATGAGAATCAGCATT+TGG | - | chr1_4:21287453-21287472 | None:intergenic | 30.0% | |
| ! | TTTTCAACAGTTGAAACATG+AGG | + | chr1_4:21287467-21287486 | Msa0155720:CDS | 30.0% |
| TGAGGTTTCAGAAAAAGATA+TGG | + | chr1_4:21287485-21287504 | Msa0155720:CDS | 30.0% | |
| CAACAATGGAGAAAATTTCA+AGG | + | chr1_4:21287626-21287645 | Msa0155720:CDS | 30.0% | |
| ACAAATAAGTCAATCCAAAC+AGG | - | chr1_4:21287661-21287680 | None:intergenic | 30.0% | |
| AGACTATTTGAGAGAGTTTA+TGG | + | chr1_4:21287708-21287727 | Msa0155720:intron | 30.0% | |
| ! | TTTTCCACCTATATCTCTTT+AGG | + | chr1_4:21287759-21287778 | Msa0155720:intron | 30.0% |
| ATAAGCACTTATCACATAAG+AGG | - | chr1_4:21288025-21288044 | None:intergenic | 30.0% | |
| GAAAATAAATTGAGCGAAAG+TGG | + | chr1_4:21288097-21288116 | Msa0155720:CDS | 30.0% | |
| TAAGCAAGATCAATGCATAA+AGG | + | chr1_4:21288147-21288166 | Msa0155720:CDS | 30.0% | |
| ATCATTACATAGGAAGATTC+TGG | - | chr1_4:21288409-21288428 | None:intergenic | 30.0% | |
| TATGGTGCCTATAATAAATC+AGG | + | chr1_4:21288474-21288493 | Msa0155720:CDS | 30.0% | |
| CATATCTATAAATACCAGCA+GGG | + | chr1_4:21288535-21288554 | Msa0155720:CDS | 30.0% | |
| !!! | TAAGATTTTGGGTTGAAATG+TGG | - | chr1_4:21288795-21288814 | None:intergenic | 30.0% |
| CATTTCAACCCAAAATCTTA+AGG | + | chr1_4:21288795-21288814 | Msa0155720:CDS | 30.0% | |
| AAGAAGCAATTGAGAAAGAA+AGG | + | chr1_4:21289032-21289051 | Msa0155720:CDS | 30.0% | |
| AGAAGCAATTGAGAAAGAAA+GGG | + | chr1_4:21289033-21289052 | Msa0155720:CDS | 30.0% | |
| TAAATGGTGGTTATGAAACA+AGG | + | chr1_4:21289146-21289165 | Msa0155720:CDS | 30.0% | |
| AAATGGTGGTTATGAAACAA+GGG | + | chr1_4:21289147-21289166 | Msa0155720:CDS | 30.0% | |
| TGGAGAGAAAATAGTTACTA+TGG | + | chr1_4:21289390-21289409 | Msa0155720:CDS | 30.0% | |
| !! | TAACAATGCTGGTTCAAAAA+TGG | + | chr1_4:21289507-21289526 | Msa0155720:CDS | 30.0% |
| AAGCAGTATAGGAGCAATAA+TGG | + | chr1_4:21283059-21283078 | Msa0155720:CDS | 35.0% | |
| AAAAGAGAAAACTTGGAGTG+GGG | - | chr1_4:21283110-21283129 | None:intergenic | 35.0% | |
| CAAAAGAGAAAACTTGGAGT+GGG | - | chr1_4:21283111-21283130 | None:intergenic | 35.0% | |
| ACAAAAGAGAAAACTTGGAG+TGG | - | chr1_4:21283112-21283131 | None:intergenic | 35.0% | |
| TTATGGCATGAATGATGGTT+TGG | - | chr1_4:21283155-21283174 | None:intergenic | 35.0% | |
| CTGGATACACCCTTAAATTA+TGG | - | chr1_4:21283172-21283191 | None:intergenic | 35.0% | |
| ATTGTTGAGTAGCTCATAGT+TGG | - | chr1_4:21283391-21283410 | None:intergenic | 35.0% | |
| AATGCAGTGCTTAATACCTT+TGG | - | chr1_4:21283480-21283499 | None:intergenic | 35.0% | |
| ATTGAGTATGGGCAAAGAAA+TGG | + | chr1_4:21284012-21284031 | Msa0155720:CDS | 35.0% | |
| TTGAGTATGGGCAAAGAAAT+GGG | + | chr1_4:21284013-21284032 | Msa0155720:CDS | 35.0% | |
| AACAACACTTCTGCTATCAA+AGG | + | chr1_4:21284040-21284059 | Msa0155720:CDS | 35.0% | |
| AGCTTTCTTGTAACCATCAT+TGG | - | chr1_4:21284413-21284432 | None:intergenic | 35.0% | |
| CTTGAAAGTGATTCATTGGA+AGG | + | chr1_4:21284703-21284722 | Msa0155720:CDS | 35.0% | |
| GAGAAGTCAAATGATTCCAA+TGG | + | chr1_4:21284894-21284913 | Msa0155720:CDS | 35.0% | |
| AGCTTTCTCTTCAACATCTT+TGG | - | chr1_4:21284926-21284945 | None:intergenic | 35.0% | |
| ! | GCTACAATTGATTCATTGGA+AGG | + | chr1_4:21284943-21284962 | Msa0155720:CDS | 35.0% |
| ! | ATTGATTCATTGGAAGGAGA+TGG | + | chr1_4:21284949-21284968 | Msa0155720:CDS | 35.0% |
| TGATGAATCTGAAGATGTTG+AGG | + | chr1_4:21285014-21285033 | Msa0155720:CDS | 35.0% | |
| AGATGTTGAGGAGAAAGATA+CGG | + | chr1_4:21285026-21285045 | Msa0155720:CDS | 35.0% | |
| AAGAAGTTCACTTGAAAAGG+AGG | + | chr1_4:21285068-21285087 | Msa0155720:CDS | 35.0% | |
| !!! | CTTGAAAAGGAGGTTTTGAA+AGG | + | chr1_4:21285078-21285097 | Msa0155720:CDS | 35.0% |
| GATGATCATGAAATAACTGC+AGG | + | chr1_4:21285105-21285124 | Msa0155720:CDS | 35.0% | |
| TTGACATGCATTATTCTGAG+AGG | - | chr1_4:21285323-21285342 | None:intergenic | 35.0% | |
| AAGACGAAAAACAAAAGCGA+CGG | - | chr1_4:21285369-21285388 | None:intergenic | 35.0% | |
| TATCTCATTTGCATGTTCAC+TGG | - | chr1_4:21285481-21285500 | None:intergenic | 35.0% | |
| !!! | TTTTTTAGCCGAAGACGTTA+CGG | + | chr1_4:21285530-21285549 | Msa0155720:CDS | 35.0% |
| AAAACAAGCATGCATGAAAG+TGG | + | chr1_4:21285717-21285736 | Msa0155720:CDS | 35.0% | |
| GCATGAAAGTGGTTATTCAT+TGG | + | chr1_4:21285728-21285747 | Msa0155720:CDS | 35.0% | |
| TCATGCAAGTGACATAAGTA+TGG | + | chr1_4:21285761-21285780 | Msa0155720:CDS | 35.0% | |
| AATTCATCCAAAAGCCAAAG+AGG | + | chr1_4:21285791-21285810 | Msa0155720:CDS | 35.0% | |
| !!! | ACATATTCCTCTTTGGCTTT+TGG | - | chr1_4:21285801-21285820 | None:intergenic | 35.0% |
| TATGTTGAGGAGAAAGCTAT+AGG | + | chr1_4:21285816-21285835 | Msa0155720:CDS | 35.0% | |
| GATGTTGAGGAGAAATCTAT+AGG | + | chr1_4:21286086-21286105 | Msa0155720:CDS | 35.0% | |
| TGAGGAGAAATCTATAGGAA+TGG | + | chr1_4:21286091-21286110 | Msa0155720:CDS | 35.0% | |
| TCAAGGAAAAACTACCATCT+TGG | + | chr1_4:21286277-21286296 | Msa0155720:CDS | 35.0% | |
| ! | TCGATTCTGGGAAATTCATT+TGG | + | chr1_4:21286317-21286336 | Msa0155720:CDS | 35.0% |
| ! | ATTCTGGGAAATTCATTTGG+TGG | + | chr1_4:21286320-21286339 | Msa0155720:CDS | 35.0% |
| GTTCAACACAACATTAACCA+CGG | + | chr1_4:21286402-21286421 | Msa0155720:intron | 35.0% | |
| CGACAAGTAAAAAGGAATGA+AGG | + | chr1_4:21286562-21286581 | Msa0155720:intron | 35.0% | |
| GAAGTCTCTTCAATCAAACA+AGG | + | chr1_4:21286820-21286839 | Msa0155720:CDS | 35.0% | |
| CTCTTCAATCAAACAAGGTT+AGG | + | chr1_4:21286825-21286844 | Msa0155720:intron | 35.0% | |
| TCGAATAAGTCGATCCAAAT+AGG | - | chr1_4:21286918-21286937 | None:intergenic | 35.0% | |
| ! | AAACTGTTTAGGATAGCTTG+TGG | + | chr1_4:21286965-21286984 | Msa0155720:intron | 35.0% |
| ATTCATTGCCTTGAAGTGAA+TGG | - | chr1_4:21287410-21287429 | None:intergenic | 35.0% | |
| ! | TGTTGTTGTTGCCAATACTT+GGG | - | chr1_4:21287611-21287630 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGCCAATACT+TGG | - | chr1_4:21287612-21287631 | None:intergenic | 35.0% |
| !! | AGTATTGGCAACAACAACAA+TGG | + | chr1_4:21287612-21287631 | Msa0155720:CDS | 35.0% |
| CTATCCTAAAGAGATATAGG+TGG | - | chr1_4:21287766-21287785 | None:intergenic | 35.0% | |
| CGACTATCCTAAAGAGATAT+AGG | - | chr1_4:21287769-21287788 | None:intergenic | 35.0% | |
| TGATCTTGCTTAGAATCTTG+TGG | - | chr1_4:21288139-21288158 | None:intergenic | 35.0% | |
| ! | ATCATATGTATTGGCCATGT+CGG | - | chr1_4:21288191-21288210 | None:intergenic | 35.0% |
| TAATGTCCTTGATACTTCTG+TGG | + | chr1_4:21288267-21288286 | Msa0155720:CDS | 35.0% | |
| AGAGAAACTGCTTCAATTTC+AGG | - | chr1_4:21288295-21288314 | None:intergenic | 35.0% | |
| TTATAGGCACCATATCAGAA+TGG | - | chr1_4:21288468-21288487 | None:intergenic | 35.0% | |
| GCATATCTATAAATACCAGC+AGG | + | chr1_4:21288534-21288553 | Msa0155720:CDS | 35.0% | |
| AAGAATGAGCTAAATGATCC+AGG | + | chr1_4:21288750-21288769 | Msa0155720:intron | 35.0% | |
| ACCCAAAATCTTAAGGCTTT+CGG | + | chr1_4:21288802-21288821 | Msa0155720:CDS | 35.0% | |
| ! | TCCGAAAGCCTTAAGATTTT+GGG | - | chr1_4:21288806-21288825 | None:intergenic | 35.0% |
| CAAGTGATGTTTGGATTATC+AGG | - | chr1_4:21289205-21289224 | None:intergenic | 35.0% | |
| TCTGAAGACTTATCAAGCAA+TGG | - | chr1_4:21289301-21289320 | None:intergenic | 35.0% | |
| ! | AGATGATAGCTTGTCAAACA+AGG | + | chr1_4:21289318-21289337 | Msa0155720:CDS | 35.0% |
| GTGTCATCTATTTCACCTAA+AGG | + | chr1_4:21289541-21289560 | Msa0155720:CDS | 35.0% | |
| ! | TTGCGCTTTTCTTTTCCTTT+AGG | - | chr1_4:21289559-21289578 | None:intergenic | 35.0% |
| ! | GAAAAGAAAAGCGCAAATTG+CGG | + | chr1_4:21289563-21289582 | Msa0155720:CDS | 35.0% |
| AAAGAGAAAACTTGGAGTGG+GGG | - | chr1_4:21283109-21283128 | None:intergenic | 40.0% | |
| ! | TTAGTGTGAAGTGTCAATGC+TGG | - | chr1_4:21283191-21283210 | None:intergenic | 40.0% |
| ! | CTTCACACTAAAAGTGTGTC+TGG | + | chr1_4:21283200-21283219 | Msa0155720:intron | 40.0% |
| AGGGTTAAACTCTCATGTGT+TGG | + | chr1_4:21283238-21283257 | Msa0155720:intron | 40.0% | |
| CAGACATATGACCCAAAATG+AGG | + | chr1_4:21283545-21283564 | Msa0155720:intron | 40.0% | |
| TCAATAGCTGAAGCCAATGA+TGG | + | chr1_4:21284397-21284416 | Msa0155720:CDS | 40.0% | |
| ATGGTTACAAGAAAGCTACG+CGG | + | chr1_4:21284416-21284435 | Msa0155720:CDS | 40.0% | |
| TCATGCAAGTGGTACAAGTA+TGG | + | chr1_4:21284498-21284517 | Msa0155720:CDS | 40.0% | |
| TCGCTGCAAGAAGAAATTCA+CGG | + | chr1_4:21284580-21284599 | Msa0155720:CDS | 40.0% | |
| TCAAATGATTCCGACAGATG+AGG | + | chr1_4:21284624-21284643 | Msa0155720:CDS | 40.0% | |
| CGAGCTTGAAAGTGATTCAT+TGG | + | chr1_4:21284699-21284718 | Msa0155720:CDS | 40.0% | |
| AATGCATCCAAAAGCTGAAG+TGG | + | chr1_4:21284768-21284787 | Msa0155720:CDS | 40.0% | |
| ! | ACATCTTCCACTTCAGCTTT+TGG | - | chr1_4:21284778-21284797 | None:intergenic | 40.0% |
| TGAAGTGGAAGATGTTCAAG+AGG | + | chr1_4:21284783-21284802 | Msa0155720:CDS | 40.0% | |
| !! | ACATCTTTGGCCTTATCCAT+TGG | - | chr1_4:21284913-21284932 | None:intergenic | 40.0% |
| GATGTTGAGGAGAAAGATAC+GGG | + | chr1_4:21285027-21285046 | Msa0155720:CDS | 40.0% | |
| TCAAGGAGAAACTGCAATCT+TGG | + | chr1_4:21285233-21285252 | Msa0155720:CDS | 40.0% | |
| AACAAAAGCGACGGGTAAAA+AGG | - | chr1_4:21285360-21285379 | None:intergenic | 40.0% | |
| AGACGAAAAACAAAAGCGAC+GGG | - | chr1_4:21285368-21285387 | None:intergenic | 40.0% | |
| CATGTTCACTGGTATCTTCT+AGG | - | chr1_4:21285470-21285489 | None:intergenic | 40.0% | |
| ACGTCTTCGGCTAAAAAAGT+TGG | - | chr1_4:21285528-21285547 | None:intergenic | 40.0% | |
| ! | AGGTTTTTCCGTAACGTCTT+CGG | - | chr1_4:21285541-21285560 | None:intergenic | 40.0% |
| AGCCAAAGAGGAATATGTTG+AGG | + | chr1_4:21285803-21285822 | Msa0155720:CDS | 40.0% | |
| CTCCTCAACATATTCCTCTT+TGG | - | chr1_4:21285808-21285827 | None:intergenic | 40.0% | |
| TGAGGAGAAAGCTATAGGAT+TGG | + | chr1_4:21285821-21285840 | Msa0155720:CDS | 40.0% | |
| GAAGATGCAACAACTGAACT+TGG | + | chr1_4:21285849-21285868 | Msa0155720:CDS | 40.0% | |
| TCAGATGATTCCAACAGATG+AGG | + | chr1_4:21285923-21285942 | Msa0155720:CDS | 40.0% | |
| ACATCTTTGACCTCATCTGT+TGG | - | chr1_4:21285936-21285955 | None:intergenic | 40.0% | |
| TGATGAAGCTGAAGATGTTG+AGG | + | chr1_4:21286073-21286092 | Msa0155720:CDS | 40.0% | |
| ATGATCATGAAAGAGCTGCA+GGG | + | chr1_4:21286165-21286184 | Msa0155720:CDS | 40.0% | |
| ! | TTCTGACGAACAATCGATTC+TGG | + | chr1_4:21286304-21286323 | Msa0155720:CDS | 40.0% |
| ! | TCTGACGAACAATCGATTCT+GGG | + | chr1_4:21286305-21286324 | Msa0155720:CDS | 40.0% |
| !! | GGAAATTCATTTGGTGGTGA+AGG | + | chr1_4:21286326-21286345 | Msa0155720:CDS | 40.0% |
| TTCCAGATCGGAAACCTATT+TGG | + | chr1_4:21286901-21286920 | Msa0155720:intron | 40.0% | |
| ATCCAAATAGGTTTCCGATC+TGG | - | chr1_4:21286906-21286925 | None:intergenic | 40.0% | |
| TTATGTCCGCAAAAGTCAGA+TGG | + | chr1_4:21287525-21287544 | Msa0155720:CDS | 40.0% | |
| ! | TCTCTTCCATCTGACTTTTG+CGG | - | chr1_4:21287534-21287553 | None:intergenic | 40.0% |
| CAAAAGTCAGATGGAAGAGA+TGG | + | chr1_4:21287534-21287553 | Msa0155720:CDS | 40.0% | |
| ACATTTGATCCCCCAAGTAT+TGG | + | chr1_4:21287597-21287616 | Msa0155720:CDS | 40.0% | |
| ! | TTGTTGTTGCCAATACTTGG+GGG | - | chr1_4:21287609-21287628 | None:intergenic | 40.0% |
| ! | GTTGTTGTTGCCAATACTTG+GGG | - | chr1_4:21287610-21287629 | None:intergenic | 40.0% |
| TCTCGGATACGGTTGTAAAA+TGG | - | chr1_4:21287865-21287884 | None:intergenic | 40.0% | |
| ! | ATTTTACAACCGTATCCGAG+AGG | + | chr1_4:21287864-21287883 | Msa0155720:intron | 40.0% |
| AGTTCAAATCCTCTCGGATA+CGG | - | chr1_4:21287876-21287895 | None:intergenic | 40.0% | |
| AGATGGAGTTCAAATCCTCT+CGG | - | chr1_4:21287882-21287901 | None:intergenic | 40.0% | |
| GATATCACAGTAGGGTCTAA+TGG | + | chr1_4:21288208-21288227 | Msa0155720:CDS | 40.0% | |
| GAAGCAGTTTCTCTTATTGC+AGG | + | chr1_4:21288301-21288320 | Msa0155720:CDS | 40.0% | |
| TCTTGATTGCACACATGACA+AGG | + | chr1_4:21288339-21288358 | Msa0155720:CDS | 40.0% | |
| CTTGATTGCACACATGACAA+GGG | + | chr1_4:21288340-21288359 | Msa0155720:CDS | 40.0% | |
| AGAGCAATGCCATTCTGATA+TGG | + | chr1_4:21288456-21288475 | Msa0155720:CDS | 40.0% | |
| AGAGCAGACCAAAAGTTTCA+CGG | + | chr1_4:21288564-21288583 | Msa0155720:CDS | 40.0% | |
| TTACTTTGTATTTGGGTGGC+CGG | + | chr1_4:21288695-21288714 | Msa0155720:intron | 40.0% | |
| CTATGATGATTCCCTAACAC+CGG | - | chr1_4:21288717-21288736 | None:intergenic | 40.0% | |
| ! | ATTTAGCTCATTCTTGCTCC+CGG | - | chr1_4:21288745-21288764 | None:intergenic | 40.0% |
| ! | CTCCGAAAGCCTTAAGATTT+TGG | - | chr1_4:21288807-21288826 | None:intergenic | 40.0% |
| CAAAATCTTAAGGCTTTCGG+AGG | + | chr1_4:21288805-21288824 | Msa0155720:CDS | 40.0% | |
| AGAAGCAACTTCACTGATAG+TGG | + | chr1_4:21289075-21289094 | Msa0155720:CDS | 40.0% | |
| AAACAAGGGACAGTGTAACA+AGG | + | chr1_4:21289161-21289180 | Msa0155720:CDS | 40.0% | |
| TGCATCTGACAAGTGATGTT+TGG | - | chr1_4:21289214-21289233 | None:intergenic | 40.0% | |
| CGATTCTTCTCGTCTTGATT+CGG | - | chr1_4:21289269-21289288 | None:intergenic | 40.0% | |
| CGAATCAAGACGAGAAGAAT+CGG | + | chr1_4:21289267-21289286 | Msa0155720:CDS | 40.0% | |
| ATGAGACCATACTCATCATG+AGG | - | chr1_4:21289370-21289389 | None:intergenic | 40.0% | |
| CATGATGAGTATGGTCTCAT+TGG | + | chr1_4:21289370-21289389 | Msa0155720:CDS | 40.0% | |
| CAGACACAAGATAACAATGC+TGG | + | chr1_4:21289496-21289515 | Msa0155720:CDS | 40.0% | |
| AGTTTAACCCTGACACGTGT+CGG | - | chr1_4:21283229-21283248 | None:intergenic | 45.0% | |
| GCTACGCGGTTTGATTCTAA+CGG | + | chr1_4:21284430-21284449 | Msa0155720:CDS | 45.0% | |
| GAAGAAGATGCTCATGCAAG+TGG | + | chr1_4:21284487-21284506 | Msa0155720:CDS | 45.0% | |
| AATGCATCCAACAGCTGAAG+AGG | + | chr1_4:21284528-21284547 | Msa0155720:CDS | 45.0% | |
| ! | ACATCATTGGCCTCATCTGT+CGG | - | chr1_4:21284637-21284656 | None:intergenic | 45.0% |
| GTGGAAGATGTTCAAGAGGA+AGG | + | chr1_4:21284787-21284806 | Msa0155720:CDS | 45.0% | |
| GATGTTCAAGAGGAAGGTTC+AGG | + | chr1_4:21284793-21284812 | Msa0155720:CDS | 45.0% | |
| TGAGGAGAAAGATACGGGAA+TGG | + | chr1_4:21285032-21285051 | Msa0155720:CDS | 45.0% | |
| GGCTTCTGATCATGATCCAT+TGG | + | chr1_4:21285254-21285273 | Msa0155720:CDS | 45.0% | |
| GCATCATGAGCATCTTCTTG+TGG | - | chr1_4:21285609-21285628 | None:intergenic | 45.0% | |
| GATGATCATGAAAGAGCTGC+AGG | + | chr1_4:21286164-21286183 | Msa0155720:CDS | 45.0% | |
| TTCGTCAGAAGAAGCCAAGA+TGG | - | chr1_4:21286294-21286313 | None:intergenic | 45.0% | |
| ! | TCGGCATATGGAGACTTTTC+AGG | - | chr1_4:21286673-21286692 | None:intergenic | 45.0% |
| CTATCCAGCCATTCACTTCA+AGG | + | chr1_4:21287399-21287418 | Msa0155720:CDS | 45.0% | |
| ATTGCCTTGAAGTGAATGGC+TGG | - | chr1_4:21287406-21287425 | None:intergenic | 45.0% | |
| CAAGGTATGTAGAGCCTGTT+TGG | + | chr1_4:21287644-21287663 | Msa0155720:intron | 45.0% | |
| GTCAGCTTAAGGCAAGAGTT+TGG | - | chr1_4:21287919-21287938 | None:intergenic | 45.0% | |
| ! | TTCCATGAGGTGTCAGCTTA+AGG | - | chr1_4:21287930-21287949 | None:intergenic | 45.0% |
| ! | TCAAGAGTACAAGTCCGACA+TGG | + | chr1_4:21288174-21288193 | Msa0155720:CDS | 45.0% |
| !! | CAGGAACCACAGAAGTATCA+AGG | - | chr1_4:21288276-21288295 | None:intergenic | 45.0% |
| ACCTGATTTAAGCATGCTCG+TGG | - | chr1_4:21288590-21288609 | None:intergenic | 45.0% | |
| CGAGCATGCTTAAATCAGGT+AGG | + | chr1_4:21288590-21288609 | Msa0155720:CDS | 45.0% | |
| TGTGCCACAATTGACAAGCT+TGG | + | chr1_4:21288640-21288659 | Msa0155720:CDS | 45.0% | |
| ATGGCCAAGCTTGTCAATTG+TGG | - | chr1_4:21288647-21288666 | None:intergenic | 45.0% | |
| ! | CGGTGTTAGGGAATCATCAT+AGG | + | chr1_4:21288715-21288734 | Msa0155720:intron | 45.0% |
| !! | TTGGGTTGAAATGTGGTGTC+CGG | - | chr1_4:21288788-21288807 | None:intergenic | 45.0% |
| TTTCTGAACCACCGAGAGAT+CGG | - | chr1_4:21288843-21288862 | None:intergenic | 45.0% | |
| !! | CTTCTCGTCTTGATTCGGTT+CGG | - | chr1_4:21289264-21289283 | None:intergenic | 45.0% |
| TCAGTGCCTCATGATGAGTA+TGG | + | chr1_4:21289361-21289380 | Msa0155720:CDS | 45.0% | |
| AGAAGCTCCTGTTCTAGTCA+TGG | + | chr1_4:21289471-21289490 | Msa0155720:CDS | 45.0% | |
| CCAACATCCTCTTCAGCTGT+TGG | - | chr1_4:21284538-21284557 | None:intergenic | 50.0% | |
| CCAACAGCTGAAGAGGATGT+TGG | + | chr1_4:21284535-21284554 | Msa0155720:CDS | 50.0% | |
| !! | CCTTCGACTGATTCGGCATA+TGG | - | chr1_4:21286685-21286704 | None:intergenic | 50.0% |
| CCATATGCCGAATCAGTCGA+AGG | + | chr1_4:21286682-21286701 | Msa0155720:CDS | 50.0% | |
| GCTCTCACCTTCGACTGATT+CGG | - | chr1_4:21286692-21286711 | None:intergenic | 50.0% | |
| TGCCTTAAGCTGACACCTCA+TGG | + | chr1_4:21287925-21287944 | Msa0155720:intron | 50.0% | |
| GGGTCTAATGGAGACTGCAA+TGG | + | chr1_4:21288220-21288239 | Msa0155720:CDS | 50.0% | |
| TCTGCTCTACATTTCCCTGC+TGG | - | chr1_4:21288552-21288571 | None:intergenic | 50.0% | |
| GCCACGAGCATGCTTAAATC+AGG | + | chr1_4:21288586-21288605 | Msa0155720:CDS | 50.0% | |
| ! | TATTTGGGTGGCCGGTGTTA+GGG | + | chr1_4:21288703-21288722 | Msa0155720:intron | 50.0% |
| GGGAATCATCATAGGAGAGC+CGG | + | chr1_4:21288723-21288742 | Msa0155720:intron | 50.0% | |
| GGAATCATCATAGGAGAGCC+GGG | + | chr1_4:21288724-21288743 | Msa0155720:intron | 50.0% | |
| ATCCAGGATCACCAAGAGAC+CGG | + | chr1_4:21288766-21288785 | Msa0155720:intron | 50.0% | |
| AAATGTGGTGTCCGGTCTCT+TGG | - | chr1_4:21288780-21288799 | None:intergenic | 50.0% | |
| TAAGGCTTTCGGAGGAGACA+TGG | + | chr1_4:21288813-21288832 | Msa0155720:CDS | 50.0% | |
| TTCTGAACCACCGAGAGATC+GGG | - | chr1_4:21288842-21288861 | None:intergenic | 50.0% | |
| AAATACCGTTCCAGCTGTCG+GGG | - | chr1_4:21288893-21288912 | None:intergenic | 50.0% | |
| CAAATACCGTTCCAGCTGTC+GGG | - | chr1_4:21288894-21288913 | None:intergenic | 50.0% | |
| CCAAATACCGTTCCAGCTGT+CGG | - | chr1_4:21288895-21288914 | None:intergenic | 50.0% | |
| CGGAGGTTGAGATTGAAGCT+TGG | - | chr1_4:21289244-21289263 | None:intergenic | 50.0% | |
| GTCTGTGCCATGACTAGAAC+AGG | - | chr1_4:21289481-21289500 | None:intergenic | 50.0% | |
| GAGAAAACTTGGAGTGGGGG+AGG | - | chr1_4:21283106-21283125 | None:intergenic | 55.0% | |
| ! | GCTGCAGGGTTGAGTTCTGA+TGG | + | chr1_4:21286179-21286198 | Msa0155720:CDS | 55.0% |
| ! | GCTCGTGGCCGTGAAACTTT+TGG | - | chr1_4:21288575-21288594 | None:intergenic | 55.0% |
| GTATTTGGGTGGCCGGTGTT+AGG | + | chr1_4:21288702-21288721 | Msa0155720:intron | 55.0% | |
| GACATGGTGTCCCGATCTCT+CGG | + | chr1_4:21288829-21288848 | Msa0155720:CDS | 55.0% | |
| GGAGTCTCGAGAGCAACAAC+GGG | - | chr1_4:21288872-21288891 | None:intergenic | 55.0% | |
| GGGAGTCTCGAGAGCAACAA+CGG | - | chr1_4:21288873-21288892 | None:intergenic | 55.0% | |
| CCGACAGCTGGAACGGTATT+TGG | + | chr1_4:21288892-21288911 | Msa0155720:CDS | 55.0% | |
| !! | CTCGTCTTGATTCGGTTCGG+AGG | - | chr1_4:21289261-21289280 | None:intergenic | 55.0% |
| TCTGGTGTCCGACACGTGTC+AGG | + | chr1_4:21283218-21283237 | Msa0155720:intron | 60.0% | |
| CTGGTGTCCGACACGTGTCA+GGG | + | chr1_4:21283219-21283238 | Msa0155720:intron | 60.0% | |
| ! | GTCCGGTCTCTTGGTGATCC+TGG | - | chr1_4:21288771-21288790 | None:intergenic | 60.0% |
| ATGGTGTCCCGATCTCTCGG+TGG | + | chr1_4:21288832-21288851 | Msa0155720:CDS | 60.0% | |
| AGACTCCCCGACAGCTGGAA+CGG | + | chr1_4:21288885-21288904 | Msa0155720:CDS | 60.0% | |
| TCTCGAGACTCCCCGACAGC+TGG | + | chr1_4:21288880-21288899 | Msa0155720:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 21283011 | 21289633 | 21283011 | ID=Msa0155720;Name=Msa0155720 |
| chr1_4 | mRNA | 21283011 | 21289633 | 21283011 | ID=Msa0155720-mRNA-1;Parent=Msa0155720;Name=Msa0155720-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.5|0.22|0.66|1|1|9|0|1354 |
| chr1_4 | exon | 21283011 | 21283080 | 21283011 | ID=Msa0155720-mRNA-1:exon:7641;Parent=Msa0155720-mRNA-1 |
| chr1_4 | exon | 21284002 | 21284061 | 21284002 | ID=Msa0155720-mRNA-1:exon:7642;Parent=Msa0155720-mRNA-1 |
| chr1_4 | exon | 21284167 | 21285303 | 21284167 | ID=Msa0155720-mRNA-1:exon:7643;Parent=Msa0155720-mRNA-1 |
| chr1_4 | exon | 21285430 | 21286347 | 21285430 | ID=Msa0155720-mRNA-1:exon:7644;Parent=Msa0155720-mRNA-1 |
| chr1_4 | exon | 21286644 | 21286841 | 21286644 | ID=Msa0155720-mRNA-1:exon:7645;Parent=Msa0155720-mRNA-1 |
| chr1_4 | exon | 21287295 | 21287647 | 21287295 | ID=Msa0155720-mRNA-1:exon:7646;Parent=Msa0155720-mRNA-1 |
| chr1_4 | exon | 21288085 | 21288666 | 21288085 | ID=Msa0155720-mRNA-1:exon:7647;Parent=Msa0155720-mRNA-1 |
| chr1_4 | exon | 21288772 | 21288913 | 21288772 | ID=Msa0155720-mRNA-1:exon:7648;Parent=Msa0155720-mRNA-1 |
| chr1_4 | exon | 21289029 | 21289633 | 21289029 | ID=Msa0155720-mRNA-1:exon:7649;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21283011 | 21283080 | 21283011 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21284002 | 21284061 | 21284002 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21284167 | 21285303 | 21284167 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21285430 | 21286347 | 21285430 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21286644 | 21286841 | 21286644 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21287295 | 21287647 | 21287295 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21288085 | 21288666 | 21288085 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21288772 | 21288913 | 21288772 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| chr1_4 | CDS | 21289029 | 21289633 | 21289029 | ID=Msa0155720-mRNA-1:cds;Parent=Msa0155720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
