Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401970 | KEH33397.1 | 95.327 | 214 | 8 | 1 | 1 | 212 | 1 | 214 | 1.89e-148 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401970 | sp|Q9FF12|GSXL9_ARATH | 68.396 | 212 | 58 | 3 | 6 | 212 | 11 | 218 | 1.12e-98 | 301 |
| Msa0401970 | sp|Q9FF12|GSXL9_ARATH | 61.538 | 117 | 42 | 1 | 210 | 323 | 342 | 458 | 1.61e-44 | 161 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401970 | A0A072UUX6 | 95.327 | 214 | 8 | 1 | 1 | 212 | 1 | 214 | 9.05e-149 | 432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa0401970 | 0.810687 | 1.018387e-50 | -8.615850e-47 |
| Msa0019900 | Msa0401970 | 0.806159 | 9.420033e-50 | -8.615850e-47 |
| Msa0022260 | Msa0401970 | 0.802224 | 6.208848e-49 | -8.615850e-47 |
| Msa0025160 | Msa0401970 | 0.845056 | 5.152872e-59 | -8.615850e-47 |
| Msa0035670 | Msa0401970 | 0.819280 | 1.261682e-52 | -8.615850e-47 |
| Msa0044160 | Msa0401970 | 0.824587 | 7.444632e-54 | -8.615850e-47 |
| Msa0048510 | Msa0401970 | 0.815564 | 8.668606e-52 | -8.615850e-47 |
| Msa0072520 | Msa0401970 | 0.854108 | 1.532536e-61 | -8.615850e-47 |
| Msa0077560 | Msa0401970 | 0.832279 | 1.035036e-55 | -8.615850e-47 |
| Msa0110200 | Msa0401970 | 0.803521 | 3.350611e-49 | -8.615850e-47 |
| Msa0132700 | Msa0401970 | 0.808506 | 2.996009e-50 | -8.615850e-47 |
| Msa0155720 | Msa0401970 | 0.808036 | 3.771579e-50 | -8.615850e-47 |
| Msa0161930 | Msa0401970 | 0.845537 | 3.817383e-59 | -8.615850e-47 |
| Msa0179700 | Msa0401970 | 0.815502 | 8.944082e-52 | -8.615850e-47 |
| Msa0183710 | Msa0401970 | 0.816533 | 5.264983e-52 | -8.615850e-47 |
| Msa0189650 | Msa0401970 | 0.803169 | 3.963362e-49 | -8.615850e-47 |
| Msa0189720 | Msa0401970 | 0.807389 | 5.177377e-50 | -8.615850e-47 |
| Msa0232030 | Msa0401970 | 0.813185 | 2.908899e-51 | -8.615850e-47 |
| Msa0232100 | Msa0401970 | 0.819752 | 9.846176e-53 | -8.615850e-47 |
| Msa0369790 | Msa0401970 | 0.803446 | 3.472414e-49 | -8.615850e-47 |
| Msa0375640 | Msa0401970 | 0.807431 | 5.072225e-50 | -8.615850e-47 |
| Msa0383000 | Msa0401970 | 0.819070 | 1.408628e-52 | -8.615850e-47 |
| Msa0386540 | Msa0401970 | 0.831124 | 1.994101e-55 | -8.615850e-47 |
| Msa0401970 | Msa0424160 | 0.810847 | 9.401625e-51 | -8.615850e-47 |
| Msa0401970 | Msa0433150 | 0.807988 | 3.861610e-50 | -8.615850e-47 |
| Msa0401970 | Msa0437480 | 0.862367 | 5.329864e-64 | -8.615850e-47 |
| Msa0401970 | Msa0437520 | 0.807142 | 5.840432e-50 | -8.615850e-47 |
| Msa0401970 | Msa0440350 | 0.875993 | 1.988172e-68 | -8.615850e-47 |
| Msa0401970 | Msa0464000 | 0.803656 | 3.141754e-49 | -8.615850e-47 |
| Msa0401970 | Msa0481890 | 0.820242 | 7.607780e-53 | -8.615850e-47 |
| Msa0401970 | Msa0495300 | 0.801701 | 7.951046e-49 | -8.615850e-47 |
| Msa0401970 | Msa0509550 | 0.803332 | 3.666523e-49 | -8.615850e-47 |
| Msa0401970 | Msa0517250 | 0.808382 | 3.183540e-50 | -8.615850e-47 |
| Msa0401970 | Msa0523570 | 0.815290 | 9.973144e-52 | -8.615850e-47 |
| Msa0401970 | Msa0528570 | 0.838248 | 3.218245e-57 | -8.615850e-47 |
| Msa0401970 | Msa0529030 | 0.800566 | 1.357106e-48 | -8.615850e-47 |
| Msa0401970 | Msa0531960 | 0.826011 | 3.427743e-54 | -8.615850e-47 |
| Msa0401970 | Msa0553750 | 0.806131 | 9.546607e-50 | -8.615850e-47 |
| Msa0401970 | Msa0601960 | 0.812496 | 4.117256e-51 | -8.615850e-47 |
| Msa0401970 | Msa0607800 | 0.831437 | 1.669856e-55 | -8.615850e-47 |
| Msa0401970 | Msa0612350 | 0.807257 | 5.522476e-50 | -8.615850e-47 |
| Msa0401970 | Msa0621710 | 0.806679 | 7.317784e-50 | -8.615850e-47 |
| Msa0401970 | Msa0648040 | 0.816917 | 4.319611e-52 | -8.615850e-47 |
| Msa0401970 | Msa0666700 | 0.823730 | 1.183155e-53 | -8.615850e-47 |
| Msa0401970 | Msa0682770 | 0.847017 | 1.509131e-59 | -8.615850e-47 |
| Msa0401970 | Msa0687090 | 0.813603 | 2.354174e-51 | -8.615850e-47 |
| Msa0401970 | Msa0687580 | 0.814259 | 1.687479e-51 | -8.615850e-47 |
| Msa0401970 | Msa0690740 | 0.811575 | 6.537623e-51 | -8.615850e-47 |
| Msa0401970 | Msa0706150 | 0.801356 | 9.358533e-49 | -8.615850e-47 |
| Msa0401970 | Msa0709440 | 0.822946 | 1.804264e-53 | -8.615850e-47 |
| Msa0401970 | Msa0716890 | 0.800323 | 1.520770e-48 | -8.615850e-47 |
| Msa0401970 | Msa0722890 | 0.800545 | 1.370349e-48 | -8.615850e-47 |
| Msa0401970 | Msa0723090 | 0.804441 | 2.156740e-49 | -8.615850e-47 |
| Msa0401970 | Msa0725750 | 0.802184 | 6.328829e-49 | -8.615850e-47 |
| Msa0401970 | Msa0738700 | 0.844120 | 9.202173e-59 | -8.615850e-47 |
| Msa0401970 | Msa0743440 | 0.819500 | 1.123950e-52 | -8.615850e-47 |
| Msa0401970 | Msa0754430 | 0.804769 | 1.842742e-49 | -8.615850e-47 |
| Msa0401970 | Msa0773630 | 0.804895 | 1.733976e-49 | -8.615850e-47 |
| Msa0401970 | Msa0780910 | 0.828717 | 7.697930e-55 | -8.615850e-47 |
| Msa0401970 | Msa0821160 | 0.810717 | 1.003175e-50 | -8.615850e-47 |
| Msa0401970 | Msa0859290 | 0.832217 | 1.072274e-55 | -8.615850e-47 |
| Msa0401970 | Msa0863620 | 0.817524 | 3.153206e-52 | -8.615850e-47 |
| Msa0401970 | Msa0876940 | 0.809275 | 2.050822e-50 | -8.615850e-47 |
| Msa0401970 | Msa0931590 | 0.803913 | 2.777526e-49 | -8.615850e-47 |
| Msa0401970 | Msa0942220 | 0.812277 | 4.596536e-51 | -8.615850e-47 |
| Msa0401970 | Msa1031410 | 0.828259 | 9.930232e-55 | -8.615850e-47 |
| Msa0401970 | Msa1035610 | 0.806336 | 8.644353e-50 | -8.615850e-47 |
| Msa0401970 | Msa1042160 | 0.829504 | 4.960513e-55 | -8.615850e-47 |
| Msa0401970 | Msa1042190 | 0.836688 | 8.083866e-57 | -8.615850e-47 |
| Msa0401970 | Msa1044250 | 0.803137 | 4.024280e-49 | -8.615850e-47 |
| Msa0401970 | Msa1059020 | 0.806879 | 6.639162e-50 | -8.615850e-47 |
| Msa0401970 | Msa1080000 | 0.812710 | 3.696621e-51 | -8.615850e-47 |
| Msa0401970 | Msa1081690 | 0.813319 | 2.718357e-51 | -8.615850e-47 |
| Msa0401970 | Msa1084530 | 0.817932 | 2.550801e-52 | -8.615850e-47 |
| Msa0401970 | Msa1101160 | 0.811085 | 8.352783e-51 | -8.615850e-47 |
| Msa0401970 | Msa1106590 | 0.823425 | 1.394491e-53 | -8.615850e-47 |
| Msa0401970 | Msa1125820 | 0.823497 | 1.341972e-53 | -8.615850e-47 |
| Msa0401970 | Msa1125990 | 0.824288 | 8.753656e-54 | -8.615850e-47 |
| Msa0401970 | Msa1127970 | 0.802842 | 4.631590e-49 | -8.615850e-47 |
| Msa0401970 | Msa1132530 | 0.814687 | 1.357016e-51 | -8.615850e-47 |
| Msa0401970 | Msa1149910 | 0.809794 | 1.586733e-50 | -8.615850e-47 |
| Msa0401970 | Msa1160920 | 0.800811 | 1.209734e-48 | -8.615850e-47 |
| Msa0401970 | Msa1167470 | 0.835082 | 2.064186e-56 | -8.615850e-47 |
| Msa0401970 | Msa1171290 | 0.818160 | 2.265680e-52 | -8.615850e-47 |
| Msa0401970 | Msa1173250 | 0.816903 | 4.350746e-52 | -8.615850e-47 |
| Msa0401970 | Msa1211920 | 0.811397 | 7.145850e-51 | -8.615850e-47 |
| Msa0401970 | Msa1216590 | 0.822671 | 2.090739e-53 | -8.615850e-47 |
| Msa0401970 | Msa1254540 | 0.814017 | 1.908234e-51 | -8.615850e-47 |
| Msa0401970 | Msa1262850 | 0.808038 | 3.769150e-50 | -8.615850e-47 |
| Msa0401970 | Msa1263740 | 0.816249 | 6.094674e-52 | -8.615850e-47 |
| Msa0401970 | Msa1263780 | 0.838935 | 2.139477e-57 | -8.615850e-47 |
| Msa0401970 | Msa1278970 | -0.811162 | 8.034606e-51 | -8.615850e-47 |
| Msa0401970 | Msa1306570 | 0.804890 | 1.738345e-49 | -8.615850e-47 |
| Msa0401970 | Msa1321530 | 0.801893 | 7.261935e-49 | -8.615850e-47 |
| Msa0401970 | Msa1338540 | 0.826578 | 2.512204e-54 | -8.615850e-47 |
| Msa0401970 | Msa1366150 | 0.812020 | 5.230385e-51 | -8.615850e-47 |
| Msa0401970 | Msa1381030 | 0.857351 | 1.731622e-62 | -8.615850e-47 |
| Msa0401970 | Msa1384150 | 0.822982 | 1.769931e-53 | -8.615850e-47 |
| Msa0401970 | Msa1387440 | 0.808832 | 2.551334e-50 | -8.615850e-47 |
| Msa0401970 | Msa1393780 | 0.811752 | 5.983830e-51 | -8.615850e-47 |
| Msa0401970 | Msa1407840 | 0.813815 | 2.114008e-51 | -8.615850e-47 |
| Msa0401970 | Msa1415540 | 0.841024 | 6.106336e-58 | -8.615850e-47 |
| Msa0401970 | Msa1429070 | 0.813851 | 2.076503e-51 | -8.615850e-47 |
| Msa0401970 | Msa1437810 | 0.811112 | 8.238998e-51 | -8.615850e-47 |
| Msa0401970 | Msa1440430 | 0.856669 | 2.751008e-62 | -8.615850e-47 |
| Msa0401970 | Msa1445120 | 0.809350 | 1.976487e-50 | -8.615850e-47 |
| Msa0401970 | Msa1447100 | 0.812744 | 3.633407e-51 | -8.615850e-47 |
| Msa0401970 | Msa1449900 | 0.827245 | 1.740557e-54 | -8.615850e-47 |
| Msa0401970 | Msa1450190 | 0.818436 | 1.962319e-52 | -8.615850e-47 |
| Msa0401970 | Msa1454500 | 0.803651 | 3.149032e-49 | -8.615850e-47 |
| Msa0269210 | Msa0401970 | 0.802146 | 6.441715e-49 | -8.615850e-47 |
| Msa0324830 | Msa0401970 | 0.813616 | 2.338591e-51 | -8.615850e-47 |
| Msa0330520 | Msa0401970 | 0.801299 | 9.615571e-49 | -8.615850e-47 |
| Msa0354840 | Msa0401970 | 0.869155 | 3.826689e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401970 | MtrunA17_Chr3g0091441 | 95.327 | 214 | 8 | 1 | 1 | 212 | 1 | 214 | 1.62e-150 | 431 |
| Msa0401970 | MtrunA17_Chr3g0091441 | 71.930 | 171 | 36 | 3 | 168 | 327 | 287 | 456 | 3.25e-75 | 238 |
| Msa0401970 | MtrunA17_Chr5g0399001 | 51.196 | 209 | 85 | 7 | 9 | 212 | 31 | 227 | 2.44e-57 | 192 |
| Msa0401970 | MtrunA17_Chr5g0399001 | 40.351 | 114 | 59 | 2 | 210 | 314 | 349 | 462 | 4.15e-20 | 90.5 |
| Msa0401970 | MtrunA17_Chr8g0352481 | 42.857 | 203 | 103 | 4 | 11 | 212 | 4 | 194 | 3.21e-50 | 172 |
| Msa0401970 | MtrunA17_Chr8g0352481 | 32.051 | 156 | 91 | 5 | 168 | 308 | 264 | 419 | 7.06e-15 | 75.1 |
| Msa0401970 | MtrunA17_Chr8g0352461 | 42.857 | 203 | 104 | 4 | 11 | 212 | 4 | 195 | 4.84e-49 | 169 |
| Msa0401970 | MtrunA17_Chr8g0352461 | 40.517 | 116 | 57 | 4 | 212 | 317 | 319 | 432 | 1.36e-16 | 80.1 |
| Msa0401970 | MtrunA17_Chr2g0301471 | 28.293 | 205 | 104 | 7 | 11 | 198 | 14 | 192 | 1.16e-13 | 71.6 |
| Msa0401970 | MtrunA17_Chr2g0305211 | 27.830 | 212 | 108 | 7 | 9 | 201 | 3 | 188 | 1.74e-12 | 68.2 |
| Msa0401970 | MtrunA17_Chr2g0305231 | 27.830 | 212 | 108 | 7 | 9 | 201 | 3 | 188 | 1.74e-12 | 68.2 |
| Msa0401970 | MtrunA17_Chr2g0304651 | 26.066 | 211 | 113 | 6 | 9 | 201 | 3 | 188 | 5.44e-12 | 66.6 |
| Msa0401970 | MtrunA17_Chr3g0139441 | 23.500 | 200 | 116 | 5 | 13 | 210 | 41 | 205 | 5.90e-12 | 66.2 |
| Msa0401970 | MtrunA17_Chr2g0301661 | 28.293 | 205 | 104 | 8 | 11 | 198 | 14 | 192 | 2.36e-11 | 64.7 |
| Msa0401970 | MtrunA17_Chr4g0070121 | 29.101 | 189 | 90 | 7 | 32 | 201 | 35 | 198 | 4.55e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401970 | AT5G07800.1 | 68.396 | 212 | 58 | 3 | 6 | 212 | 11 | 218 | 1.14e-99 | 301 |
| Msa0401970 | AT5G07800.1 | 61.538 | 117 | 42 | 1 | 210 | 323 | 342 | 458 | 1.64e-45 | 161 |
| Msa0401970 | AT5G61290.1 | 66.346 | 208 | 67 | 3 | 6 | 212 | 11 | 216 | 4.33e-98 | 297 |
| Msa0401970 | AT5G61290.1 | 53.448 | 174 | 66 | 6 | 166 | 325 | 286 | 458 | 1.85e-49 | 171 |
| Msa0401970 | AT1G63370.2 | 49.282 | 209 | 97 | 5 | 6 | 211 | 8 | 210 | 4.09e-61 | 198 |
| Msa0401970 | AT1G62620.2 | 49.048 | 210 | 98 | 5 | 6 | 212 | 8 | 211 | 1.71e-60 | 198 |
| Msa0401970 | AT1G62620.1 | 49.048 | 210 | 98 | 5 | 6 | 212 | 8 | 211 | 8.74e-60 | 198 |
| Msa0401970 | AT1G62620.1 | 42.857 | 112 | 59 | 2 | 210 | 316 | 333 | 444 | 2.37e-20 | 91.7 |
| Msa0401970 | AT1G63370.1 | 49.282 | 209 | 97 | 5 | 6 | 211 | 8 | 210 | 9.22e-60 | 198 |
| Msa0401970 | AT1G63370.1 | 42.857 | 112 | 59 | 2 | 210 | 316 | 333 | 444 | 3.12e-20 | 91.3 |
| Msa0401970 | AT1G62560.2 | 47.032 | 219 | 98 | 7 | 1 | 212 | 1 | 208 | 2.68e-57 | 190 |
| Msa0401970 | AT1G62560.1 | 47.032 | 219 | 98 | 7 | 1 | 212 | 1 | 208 | 2.13e-56 | 190 |
| Msa0401970 | AT1G62560.1 | 30.247 | 162 | 98 | 5 | 168 | 314 | 279 | 440 | 3.80e-14 | 73.2 |
| Msa0401970 | AT1G65860.1 | 47.368 | 209 | 95 | 5 | 8 | 212 | 10 | 207 | 2.18e-55 | 187 |
| Msa0401970 | AT1G65860.1 | 35.455 | 110 | 66 | 2 | 212 | 316 | 332 | 441 | 2.81e-14 | 73.6 |
| Msa0401970 | AT1G12160.1 | 46.411 | 209 | 104 | 4 | 5 | 212 | 6 | 207 | 1.60e-54 | 185 |
| Msa0401970 | AT1G12160.1 | 26.484 | 219 | 117 | 8 | 139 | 316 | 240 | 455 | 5.43e-11 | 63.9 |
| Msa0401970 | AT1G62600.2 | 48.815 | 211 | 97 | 5 | 7 | 212 | 9 | 213 | 4.63e-51 | 174 |
| Msa0401970 | AT1G12200.2 | 48.357 | 213 | 100 | 6 | 4 | 212 | 7 | 213 | 7.83e-51 | 173 |
| Msa0401970 | AT1G62600.1 | 48.815 | 211 | 97 | 5 | 7 | 212 | 9 | 213 | 2.06e-50 | 174 |
| Msa0401970 | AT1G62600.1 | 37.500 | 112 | 65 | 2 | 210 | 316 | 335 | 446 | 3.00e-15 | 76.6 |
| Msa0401970 | AT1G12200.1 | 48.357 | 213 | 100 | 6 | 4 | 212 | 7 | 213 | 3.94e-50 | 173 |
| Msa0401970 | AT1G12200.1 | 36.937 | 111 | 64 | 2 | 210 | 314 | 335 | 445 | 1.11e-15 | 77.8 |
| Msa0401970 | AT1G63340.1 | 49.065 | 214 | 96 | 6 | 2 | 211 | 5 | 209 | 1.09e-48 | 169 |
| Msa0401970 | AT1G62580.2 | 50.962 | 208 | 89 | 6 | 2 | 205 | 5 | 203 | 2.00e-48 | 169 |
| Msa0401970 | AT1G62580.2 | 30.702 | 114 | 71 | 3 | 210 | 316 | 332 | 444 | 7.41e-11 | 63.2 |
| Msa0401970 | AT1G62540.3 | 47.619 | 210 | 95 | 5 | 7 | 212 | 9 | 207 | 1.95e-47 | 166 |
| Msa0401970 | AT1G62540.3 | 33.636 | 110 | 68 | 2 | 212 | 316 | 314 | 423 | 6.78e-14 | 72.4 |
| Msa0401970 | AT1G62540.1 | 47.619 | 210 | 95 | 5 | 7 | 212 | 9 | 207 | 2.62e-47 | 166 |
| Msa0401970 | AT1G62540.1 | 27.439 | 164 | 104 | 4 | 168 | 316 | 278 | 441 | 5.04e-14 | 72.8 |
| Msa0401970 | AT1G62540.2 | 47.619 | 210 | 95 | 5 | 7 | 212 | 9 | 207 | 3.37e-47 | 166 |
| Msa0401970 | AT1G62540.2 | 30.000 | 140 | 93 | 2 | 182 | 316 | 327 | 466 | 6.85e-14 | 72.8 |
| Msa0401970 | AT1G62580.3 | 48.636 | 220 | 88 | 8 | 2 | 205 | 5 | 215 | 2.99e-46 | 160 |
| Msa0401970 | AT1G12140.1 | 46.445 | 211 | 95 | 6 | 8 | 212 | 10 | 208 | 1.12e-45 | 161 |
| Msa0401970 | AT1G12140.1 | 35.455 | 110 | 66 | 2 | 212 | 316 | 332 | 441 | 1.62e-14 | 74.3 |
| Msa0401970 | AT1G12140.3 | 46.445 | 211 | 95 | 6 | 8 | 212 | 10 | 208 | 1.12e-45 | 161 |
| Msa0401970 | AT1G12140.3 | 35.455 | 110 | 66 | 2 | 212 | 316 | 332 | 441 | 1.62e-14 | 74.3 |
| Msa0401970 | AT1G62580.1 | 48.636 | 220 | 88 | 8 | 2 | 205 | 5 | 215 | 4.68e-45 | 160 |
| Msa0401970 | AT1G62570.1 | 44.976 | 209 | 100 | 5 | 8 | 212 | 10 | 207 | 7.47e-44 | 156 |
| Msa0401970 | AT1G62570.1 | 36.134 | 119 | 69 | 3 | 212 | 325 | 332 | 448 | 2.65e-14 | 73.9 |
| Msa0401970 | AT1G12130.1 | 43.750 | 208 | 107 | 4 | 8 | 212 | 10 | 210 | 3.75e-43 | 155 |
| Msa0401970 | AT1G12140.2 | 45.972 | 211 | 94 | 7 | 8 | 212 | 10 | 206 | 8.74e-43 | 154 |
| Msa0401970 | AT1G12140.2 | 35.455 | 110 | 66 | 2 | 212 | 316 | 330 | 439 | 1.64e-14 | 74.3 |
| Msa0401970 | AT1G63390.1 | 50.625 | 160 | 68 | 5 | 7 | 161 | 9 | 162 | 1.32e-34 | 124 |
| Msa0401970 | AT1G19250.1 | 29.048 | 210 | 108 | 7 | 8 | 201 | 10 | 194 | 2.41e-15 | 77.0 |
| Msa0401970 | AT5G45180.1 | 27.459 | 244 | 119 | 9 | 6 | 233 | 8 | 209 | 2.81e-12 | 67.8 |
Find 88 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATCATGTTACCTTTAA+TGG | 0.061625 | 3_2:+29528765 | None:intergenic |
| CCTTTAATGGATGGCAATTT+TGG | 0.113400 | 3_2:+29528778 | None:intergenic |
| TGGATAGCTCAATTGCTTTC+TGG | 0.169069 | 3_2:-29524756 | Msa0401970:CDS |
| CCTCATGTCTCTACCTTTCT+TGG | 0.191684 | 3_2:+29529035 | None:intergenic |
| CCAAAATTGCCATCCATTAA+AGG | 0.193960 | 3_2:-29528778 | Msa0401970:intron |
| CTACCTTTCTTGGTAGAAAA+TGG | 0.198982 | 3_2:+29529045 | None:intergenic |
| GGATTAGGTCAGAGAAAATA+AGG | 0.208514 | 3_2:+29529459 | None:intergenic |
| GTTAACAATGGAGTTAATTA+TGG | 0.259199 | 3_2:+29523410 | None:intergenic |
| AGAGAGAGATTGAGAGGATT+AGG | 0.314180 | 3_2:+29529444 | None:intergenic |
| GAAAAGAGTTTCTACCTAAA+GGG | 0.316983 | 3_2:+29529142 | None:intergenic |
| GGCATTCCTACTCATGATAT+TGG | 0.332854 | 3_2:-29524660 | Msa0401970:CDS |
| ACCTCATTGTGGAATGGTTC+TGG | 0.335360 | 3_2:+29528362 | None:intergenic |
| GTTGGAATGCTGGATGATTA+TGG | 0.342370 | 3_2:-29528913 | Msa0401970:CDS |
| GGATAGCTCAATTGCTTTCT+GGG | 0.344271 | 3_2:-29524755 | Msa0401970:CDS |
| TTATCTCTCTTGCGGCTACT+AGG | 0.355864 | 3_2:+29529256 | None:intergenic |
| TGCCTGCTACTTCTCTTTCA+TGG | 0.373660 | 3_2:+29524679 | None:intergenic |
| AAATGCATAGTCACATTTAC+AGG | 0.376176 | 3_2:-29528388 | Msa0401970:CDS |
| AGAAAAGAGTTTCTACCTAA+AGG | 0.378578 | 3_2:+29529141 | None:intergenic |
| AATTAACTCCATTGTTAACT+TGG | 0.387019 | 3_2:-29523406 | Msa0401970:CDS |
| TCGAAGAATGTATGTGTAAT+CGG | 0.407163 | 3_2:-29529294 | Msa0401970:CDS |
| AGATGATAAGGTTCAATACT+AGG | 0.413544 | 3_2:-29528945 | Msa0401970:CDS |
| TTGCAGTATTGTGACAAATA+TGG | 0.418374 | 3_2:-29523489 | Msa0401970:intron |
| AATACTAGGGTTAATTATGT+TGG | 0.420112 | 3_2:-29528931 | Msa0401970:CDS |
| TTGGGTTAAGAGAGATGATA+AGG | 0.423127 | 3_2:-29528957 | Msa0401970:CDS |
| TTGTGATAAGGTTGTGGAAG+AGG | 0.425393 | 3_2:-29528842 | Msa0401970:CDS |
| TTCTCCATTCTTGTAATGGT+GGG | 0.427729 | 3_2:+29523451 | None:intergenic |
| CTGGATGATTATGGTGTTTG+TGG | 0.433546 | 3_2:-29528904 | Msa0401970:CDS |
| ATTGAGCTATCCACATTGCT+TGG | 0.438044 | 3_2:+29524766 | None:intergenic |
| AAGGACTTTGAAGGGCATCT+TGG | 0.442045 | 3_2:+29523346 | None:intergenic |
| ATAGAAGGTGAAGACCCTTT+AGG | 0.454904 | 3_2:-29529156 | Msa0401970:CDS |
| AGTCCTTACTTCACTCAACT+TGG | 0.454993 | 3_2:-29523330 | Msa0401970:CDS |
| GTGAACCCCATGACTTCTCT+TGG | 0.457699 | 3_2:+29529075 | None:intergenic |
| GATGCAGTGGTTGTTGCCAC+TGG | 0.458878 | 3_2:-29528814 | Msa0401970:CDS |
| TTTCTCCATTCTTGTAATGG+TGG | 0.463654 | 3_2:+29523450 | None:intergenic |
| GTCTCGGAAACCATGGTTGT+TGG | 0.464030 | 3_2:+29529324 | None:intergenic |
| CAAAGAGAAGAATTGTGATA+AGG | 0.466523 | 3_2:-29528854 | Msa0401970:CDS |
| TATGATGATCAAAACATAGA+AGG | 0.468968 | 3_2:-29529171 | Msa0401970:CDS |
| TTGAGCTATCCACATTGCTT+GGG | 0.470765 | 3_2:+29524767 | None:intergenic |
| ATAAGTATTTCAACATGGCC+AGG | 0.471295 | 3_2:+29529006 | None:intergenic |
| GAGTGGAGAGAGAGATTGAG+AGG | 0.471765 | 3_2:+29529438 | None:intergenic |
| TTCATCATTTCCTCCCATGA+TGG | 0.480463 | 3_2:+29524720 | None:intergenic |
| GGTTAATTATGTTGGAATGC+TGG | 0.488461 | 3_2:-29528923 | Msa0401970:CDS |
| GATTAGGTCAGAGAAAATAA+GGG | 0.490928 | 3_2:+29529460 | None:intergenic |
| GAAGAATTGTGATAAGGTTG+TGG | 0.495518 | 3_2:-29528848 | Msa0401970:CDS |
| TTACACATACATTCTTCGAT+TGG | 0.503230 | 3_2:+29529298 | None:intergenic |
| GAGTGAAGTAAGGACTTTGA+AGG | 0.503755 | 3_2:+29523337 | None:intergenic |
| GACTCCCACCATTACAAGAA+TGG | 0.510699 | 3_2:-29523455 | Msa0401970:CDS |
| ATCATGTTACCTTTAATGGA+TGG | 0.517087 | 3_2:+29528769 | None:intergenic |
| ATTGCTTGGGACTCAAAGAA+AGG | 0.521937 | 3_2:+29524780 | None:intergenic |
| AGTCCAAGTTGAGTGAAGTA+AGG | 0.523677 | 3_2:+29523327 | None:intergenic |
| ACAATCTCCAAGAGAAGTCA+TGG | 0.524334 | 3_2:-29529082 | Msa0401970:CDS |
| GTAATCGGAGCTGGACCAGC+AGG | 0.524767 | 3_2:-29529279 | Msa0401970:CDS |
| CTTGCGGCTACTAGGCCTGC+TGG | 0.525184 | 3_2:+29529264 | None:intergenic |
| AGAGACATGAGGAGGTTCCC+TGG | 0.530130 | 3_2:-29529024 | Msa0401970:CDS |
| AATGTATGTGTAATCGGAGC+TGG | 0.531770 | 3_2:-29529288 | Msa0401970:CDS |
| TTGCTTGGGACTCAAAGAAA+GGG | 0.544898 | 3_2:+29524781 | None:intergenic |
| GCAAGAGAGATAAGAAAAGA+AGG | 0.546927 | 3_2:-29529246 | Msa0401970:CDS |
| GATGATAAGGTTCAATACTA+GGG | 0.548336 | 3_2:-29528944 | Msa0401970:CDS |
| TTTGTGGAAATAATTTGAAG+TGG | 0.551830 | 3_2:-29528888 | Msa0401970:CDS |
| TGGAGACATATCGAGACTCA+TGG | 0.565705 | 3_2:-29523386 | Msa0401970:CDS |
| ATTCTTCGATTGGTTCGTCT+CGG | 0.570145 | 3_2:+29529308 | None:intergenic |
| GAACAAAATCATGACATTGG+AGG | 0.571831 | 3_2:-29529204 | Msa0401970:CDS |
| TACCATGAAAGAGAAGTAGC+AGG | 0.579370 | 3_2:-29524681 | Msa0401970:CDS |
| AATGCTCAGGAATGGATACA+TGG | 0.580865 | 3_2:-29528421 | Msa0401970:intron |
| AAATATACCTCATTGTGGAA+TGG | 0.585498 | 3_2:+29528356 | None:intergenic |
| CTAGAACAAAATCATGACAT+TGG | 0.588881 | 3_2:-29529207 | Msa0401970:CDS |
| CAATCTCCAAGAGAAGTCAT+GGG | 0.596018 | 3_2:-29529081 | Msa0401970:CDS |
| TTGGTTCGTCTCGGAAACCA+TGG | 0.598800 | 3_2:+29529317 | None:intergenic |
| TTCATGGTAGAACTCCTCGA+TGG | 0.601727 | 3_2:+29524695 | None:intergenic |
| AAATCTCCAATATCATGAGT+AGG | 0.603660 | 3_2:+29524654 | None:intergenic |
| GGAGACATATCGAGACTCAT+GGG | 0.605682 | 3_2:-29523385 | Msa0401970:CDS |
| TAAGTATTTCAACATGGCCA+GGG | 0.607233 | 3_2:+29529007 | None:intergenic |
| AAAAGTATTGCCATCATGGG+AGG | 0.610259 | 3_2:-29524730 | Msa0401970:CDS |
| AGTGAAGTAAGGACTTTGAA+GGG | 0.616149 | 3_2:+29523338 | None:intergenic |
| ACATATTTGTCCAACAACCA+TGG | 0.621885 | 3_2:-29529334 | Msa0401970:intron |
| TGGTTTAGAGTAATGACCAG+TGG | 0.628950 | 3_2:+29528798 | None:intergenic |
| ATATGTCTCCAAGTTAACAA+TGG | 0.636025 | 3_2:+29523398 | None:intergenic |
| GACAAATATGGTGAGAATGT+AGG | 0.639510 | 3_2:-29523477 | Msa0401970:CDS |
| CCAAGAAAGGTAGAGACATG+AGG | 0.642980 | 3_2:-29529035 | Msa0401970:CDS |
| AGACTCATGGGATGATGATG+AGG | 0.660730 | 3_2:-29523373 | Msa0401970:CDS |
| GATACATAAGTATTTCAACA+TGG | 0.661901 | 3_2:+29529001 | None:intergenic |
| ATAGCAAATATACCTCATTG+TGG | 0.662065 | 3_2:+29528351 | None:intergenic |
| TCCAGAACCATTCCACAATG+AGG | 0.662680 | 3_2:-29528363 | Msa0401970:intron |
| TCTTTGAGTCCCAAGCAATG+TGG | 0.679786 | 3_2:-29524776 | Msa0401970:CDS |
| ATCATGACATTGGAGGACAA+TGG | 0.702844 | 3_2:-29529197 | Msa0401970:CDS |
| AGAAAGGTAGAGACATGAGG+AGG | 0.707282 | 3_2:-29529032 | Msa0401970:CDS |
| AATCTCCAAGAGAAGTCATG+GGG | 0.726188 | 3_2:-29529080 | Msa0401970:CDS |
| GGAAATGATGAAATCCATCG+AGG | 0.746562 | 3_2:-29524709 | Msa0401970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAAATATATTTTAAATT+TGG | + | chr3_2:29529314-29529333 | None:intergenic | 0.0% |
| !!! | ATTTTCTCATAATAATTAAA+GGG | - | chr3_2:29524080-29524099 | Msa0401970:intron | 10.0% |
| !! | AGAAATATTAAAATTAAGTA+AGG | - | chr3_2:29525357-29525376 | Msa0401970:intron | 10.0% |
| !!! | TTTTATTAAATAAAGTAGTT+GGG | - | chr3_2:29525474-29525493 | Msa0401970:intron | 10.0% |
| !! | ATGATATTTGAATAATAATT+TGG | - | chr3_2:29525607-29525626 | Msa0401970:intron | 10.0% |
| !! | TGATATTTGAATAATAATTT+GGG | - | chr3_2:29525608-29525627 | Msa0401970:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAT+AGG | - | chr3_2:29526212-29526231 | Msa0401970:intron | 10.0% |
| !! | AAGAAAAATGTATAAATATA+GGG | - | chr3_2:29526213-29526232 | Msa0401970:intron | 10.0% |
| !! | ATTATTAATTAGAGTTATAA+AGG | - | chr3_2:29526272-29526291 | Msa0401970:intron | 10.0% |
| !! | TTATTAATTAGAGTTATAAA+GGG | - | chr3_2:29526273-29526292 | Msa0401970:intron | 10.0% |
| !!! | TCAAGAATAATATTTTTTTT+GGG | + | chr3_2:29526984-29527003 | None:intergenic | 10.0% |
| !!! | TTCAAGAATAATATTTTTTT+TGG | + | chr3_2:29526985-29527004 | None:intergenic | 10.0% |
| !! | AAAAAATATTATTCTTGAAT+TGG | - | chr3_2:29526986-29527005 | Msa0401970:intron | 10.0% |
| !!! | ATAATTTTTATTGTTGAAAA+AGG | + | chr3_2:29527181-29527200 | None:intergenic | 10.0% |
| !!! | TGAAAAGTTTTTTTTTTTAA+CGG | - | chr3_2:29527269-29527288 | Msa0401970:intron | 10.0% |
| !!! | ATTAATAATATCTTTTCAAA+CGG | + | chr3_2:29527295-29527314 | None:intergenic | 10.0% |
| !! | TTATTAATCTATTATTAAAC+AGG | - | chr3_2:29527307-29527326 | Msa0401970:intron | 10.0% |
| !! | TAATCTCTAATAAAAAATTA+AGG | + | chr3_2:29527431-29527450 | None:intergenic | 10.0% |
| !! | ACCTAAAAAATTATAATTTA+TGG | - | chr3_2:29527531-29527550 | Msa0401970:intron | 10.0% |
| !! | CCTAAAAAATTATAATTTAT+GGG | - | chr3_2:29527532-29527551 | Msa0401970:intron | 10.0% |
| !! | GAAAACAAATATTAAATTTA+AGG | + | chr3_2:29527574-29527593 | None:intergenic | 10.0% |
| !! | AAAAAAAATAAACAAAATCT+TGG | - | chr3_2:29527974-29527993 | Msa0401970:intron | 10.0% |
| !!! | TAAGAAAATATATTTTTCTA+TGG | + | chr3_2:29528242-29528261 | None:intergenic | 10.0% |
| !!! | TTTTTTACTATTTTGATAAA+AGG | + | chr3_2:29528313-29528332 | None:intergenic | 10.0% |
| !!! | TATCTCTAAAATGAAATAAA+TGG | + | chr3_2:29523883-29523902 | None:intergenic | 15.0% |
| !!! | ATACAAGACTTTTATTTATA+TGG | - | chr3_2:29524015-29524034 | Msa0401970:intron | 15.0% |
| !!! | CATTTTCTCATAATAATTAA+AGG | - | chr3_2:29524079-29524098 | Msa0401970:intron | 15.0% |
| !! | ATAATTATATATTAATGCTC+AGG | - | chr3_2:29524162-29524181 | Msa0401970:intron | 15.0% |
| !! | TCTATAATACATGTAAATAA+TGG | - | chr3_2:29524479-29524498 | Msa0401970:intron | 15.0% |
| !! | AATTATAGAGTATACTAATA+TGG | - | chr3_2:29524870-29524889 | Msa0401970:intron | 15.0% |
| !! | ATTATAGAGTATACTAATAT+GGG | - | chr3_2:29524871-29524890 | Msa0401970:intron | 15.0% |
| !!! | TAGAAGTAATTTTTTTTGTA+GGG | + | chr3_2:29524974-29524993 | None:intergenic | 15.0% |
| !!! | TTAGAAGTAATTTTTTTTGT+AGG | + | chr3_2:29524975-29524994 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+GGG | + | chr3_2:29525034-29525053 | None:intergenic | 15.0% |
| !! | AAGATAAAATTAACAAAATC+TGG | - | chr3_2:29525165-29525184 | Msa0401970:intron | 15.0% |
| !!! | CTTTTATTAAATAAAGTAGT+TGG | - | chr3_2:29525473-29525492 | Msa0401970:intron | 15.0% |
| !! | AGAAAAATGTATAAATATAG+GGG | - | chr3_2:29526214-29526233 | Msa0401970:intron | 15.0% |
| !! | ACACTTCTAATTAAAAATAT+GGG | - | chr3_2:29526708-29526727 | Msa0401970:intron | 15.0% |
| !!! | CAAGAATAATATTTTTTTTG+GGG | + | chr3_2:29526983-29527002 | None:intergenic | 15.0% |
| !! | ATTGATAGATTTATTTGTAT+TGG | - | chr3_2:29527118-29527137 | Msa0401970:intron | 15.0% |
| !!! | CTTTTCAAATGTAAATAAAT+CGG | + | chr3_2:29527256-29527275 | None:intergenic | 15.0% |
| !! | GACTAAAAATAACAAATATT+AGG | + | chr3_2:29527409-29527428 | None:intergenic | 15.0% |
| !!! | CCCATAAATTATAATTTTTT+AGG | + | chr3_2:29527535-29527554 | None:intergenic | 15.0% |
| !! | AAAAAATTCTTCTTTATAGT+TGG | - | chr3_2:29527595-29527614 | Msa0401970:intron | 15.0% |
| !!! | TTTTTAACAAAACAATATCT+TGG | - | chr3_2:29528005-29528024 | Msa0401970:intron | 15.0% |
| !! | GTGCATATTATAAAATTTAA+TGG | + | chr3_2:29528034-29528053 | None:intergenic | 15.0% |
| !! | AAAATTCTTAAAATGTCATA+AGG | - | chr3_2:29528329-29528348 | Msa0401970:intron | 15.0% |
| !! | AAATTCTTAAAATGTCATAA+GGG | - | chr3_2:29528330-29528349 | Msa0401970:intron | 15.0% |
| !! | TGACAATAAAAAACTATTAA+TGG | + | chr3_2:29528359-29528378 | None:intergenic | 15.0% |
| !! | TTCATCTAAAAATACTTATT+TGG | - | chr3_2:29528496-29528515 | Msa0401970:intron | 15.0% |
| !! | TCATCTAAAAATACTTATTT+GGG | - | chr3_2:29528497-29528516 | Msa0401970:intron | 15.0% |
| !! | AATATAATATCATACGAAAA+TGG | - | chr3_2:29528784-29528803 | Msa0401970:CDS | 15.0% |
| !!! | TTCATTTTTCCATAAATTAA+TGG | + | chr3_2:29529045-29529064 | None:intergenic | 15.0% |
| !! | TAATTTATGGAAAAATGAAA+AGG | - | chr3_2:29529046-29529065 | Msa0401970:CDS | 15.0% |
| !! | GAGAAAAAATAAGAAAAATG+AGG | + | chr3_2:29523096-29523115 | None:intergenic | 20.0% |
| !! | TTTAAGCTAAAAATAAAGAG+TGG | + | chr3_2:29523178-29523197 | None:intergenic | 20.0% |
| !!! | ATCTAAAAGATTTTTGTGAA+TGG | - | chr3_2:29523615-29523634 | Msa0401970:intron | 20.0% |
| !! | TGAATATGATATAAAGAAAC+AGG | - | chr3_2:29523903-29523922 | Msa0401970:intron | 20.0% |
| !! | TTTATAATGTAATACTCCAA+AGG | - | chr3_2:29523937-29523956 | Msa0401970:intron | 20.0% |
| !! | GAAAAAAATATACAAAGACT+TGG | + | chr3_2:29524041-29524060 | None:intergenic | 20.0% |
| !! | AGAGATATAATTGTGATATA+TGG | + | chr3_2:29524362-29524381 | None:intergenic | 20.0% |
| !!! | TAATACATGTAAATAATGGA+AGG | - | chr3_2:29524483-29524502 | Msa0401970:intron | 20.0% |
| !!! | AATACATGTAAATAATGGAA+GGG | - | chr3_2:29524484-29524503 | Msa0401970:intron | 20.0% |
| !! | TTTATTTATATAACAGGTTG+TGG | - | chr3_2:29524566-29524585 | Msa0401970:intron | 20.0% |
| !! | ATTATAATTATCAATACCTG+TGG | + | chr3_2:29524741-29524760 | None:intergenic | 20.0% |
| !! | ATTATATTAAGTGTGGTTTA+AGG | - | chr3_2:29524824-29524843 | Msa0401970:intron | 20.0% |
| !!! | ATATGGGTTAAATATGTTTT+TGG | - | chr3_2:29524887-29524906 | Msa0401970:intron | 20.0% |
| !! | AAACCTATGAAAATTAAGTA+AGG | + | chr3_2:29524945-29524964 | None:intergenic | 20.0% |
| !! | GTTCAAAAATTTAAGAGTTT+AGG | + | chr3_2:29525035-29525054 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGATG+AGG | - | chr3_2:29525294-29525313 | Msa0401970:intron | 20.0% |
| !! | AAACAAATTTGAATTGATGA+GGG | - | chr3_2:29525295-29525314 | Msa0401970:intron | 20.0% |
| !! | AGTGCAAAAATAAAAACTTA+AGG | - | chr3_2:29525328-29525347 | Msa0401970:intron | 20.0% |
| !! | GTGCAAAAATAAAAACTTAA+GGG | - | chr3_2:29525329-29525348 | Msa0401970:intron | 20.0% |
| !!! | TTAAAAGATCCCAATTTTAT+AGG | - | chr3_2:29525387-29525406 | Msa0401970:intron | 20.0% |
| !!! | TAAAAGATCCCAATTTTATA+GGG | - | chr3_2:29525388-29525407 | Msa0401970:intron | 20.0% |
| !! | ATTGAGATAAATAATGCATA+AGG | - | chr3_2:29525500-29525519 | Msa0401970:intron | 20.0% |
| !! | ACATTATATGAGTATTTGAA+AGG | - | chr3_2:29525698-29525717 | Msa0401970:intron | 20.0% |
| !! | TATATAGTAACGTGTTATAT+TGG | - | chr3_2:29525783-29525802 | Msa0401970:intron | 20.0% |
| !! | ATGACCAAATAAATAGTATT+TGG | - | chr3_2:29525932-29525951 | Msa0401970:intron | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | - | chr3_2:29526237-29526256 | Msa0401970:intron | 20.0% |
| !!! | TGTTTTTGAAATTCATCAAT+TGG | - | chr3_2:29526428-29526447 | Msa0401970:intron | 20.0% |
| !!! | TTAGGTTAATTACCTTTTTA+GGG | + | chr3_2:29526591-29526610 | None:intergenic | 20.0% |
| !!! | TTTAGGTTAATTACCTTTTT+AGG | + | chr3_2:29526592-29526611 | None:intergenic | 20.0% |
| !!! | ATTTTTCAATTGCTGATTTT+AGG | + | chr3_2:29526609-29526628 | None:intergenic | 20.0% |
| !! | CAATTGAAAAATTAGTTATG+AGG | - | chr3_2:29526617-29526636 | Msa0401970:intron | 20.0% |
| !! | GACACTTCTAATTAAAAATA+TGG | - | chr3_2:29526707-29526726 | Msa0401970:intron | 20.0% |
| !! | TATCAGTATATATCATGTTT+AGG | - | chr3_2:29526920-29526939 | Msa0401970:intron | 20.0% |
| !! | ATCAGTATATATCATGTTTA+GGG | - | chr3_2:29526921-29526940 | Msa0401970:intron | 20.0% |
| !! | TAGCTCAATGTTTATTATTT+GGG | + | chr3_2:29527037-29527056 | None:intergenic | 20.0% |
| !! | GCAATTATAGATGAAATATT+GGG | - | chr3_2:29527329-29527348 | Msa0401970:intron | 20.0% |
| !!! | ACATTTGATATACATACTTT+TGG | + | chr3_2:29527754-29527773 | None:intergenic | 20.0% |
| !!! | ATTTGTTAGATTTCAACTAA+TGG | - | chr3_2:29528145-29528164 | Msa0401970:intron | 20.0% |
| !! | TTTGTTAGATTTCAACTAAT+GGG | - | chr3_2:29528146-29528165 | Msa0401970:intron | 20.0% |
| !! | CATCTAAAAATACTTATTTG+GGG | - | chr3_2:29528498-29528517 | Msa0401970:intron | 20.0% |
| !!! | GAGAATGAACAATTTTAAAA+GGG | + | chr3_2:29528571-29528590 | None:intergenic | 20.0% |
| !!! | AGAGAATGAACAATTTTAAA+AGG | + | chr3_2:29528572-29528591 | None:intergenic | 20.0% |
| !! | ATACGAAAATGGTATTATTT+GGG | - | chr3_2:29528795-29528814 | Msa0401970:CDS | 20.0% |
| !! | AATTATCTGATTGTAATATG+AGG | - | chr3_2:29528923-29528942 | Msa0401970:CDS | 20.0% |
| ! | ACAAATATGTTGGATCAAAT+TGG | + | chr3_2:29523252-29523271 | None:intergenic | 25.0% |
| ! | TATGATGATCAAAACATAGA+AGG | - | chr3_2:29523425-29523444 | Msa0401970:CDS | 25.0% |
| ! | GATACATAAGTATTTCAACA+TGG | + | chr3_2:29523598-29523617 | None:intergenic | 25.0% |
| !! | AAAGATTTTTGTGAATGGTT+TGG | - | chr3_2:29523620-29523639 | Msa0401970:intron | 25.0% |
| !! | AAGATTTTTGTGAATGGTTT+GGG | - | chr3_2:29523621-29523640 | Msa0401970:intron | 25.0% |
| ! | AATACTAGGGTTAATTATGT+TGG | - | chr3_2:29523665-29523684 | Msa0401970:intron | 25.0% |
| ! | TTTGTGGAAATAATTTGAAG+TGG | - | chr3_2:29523708-29523727 | Msa0401970:intron | 25.0% |
| ! | GAAAATCATGTTACCTTTAA+TGG | + | chr3_2:29523834-29523853 | None:intergenic | 25.0% |
| ! | ATATAAAGAAACAGGAAGAA+AGG | - | chr3_2:29523911-29523930 | Msa0401970:intron | 25.0% |
| ! | TATATATTAATGCTCAGGAA+TGG | - | chr3_2:29524167-29524186 | Msa0401970:intron | 25.0% |
| ! | ATTTACATGTATTATAGAGC+AGG | + | chr3_2:29524477-29524496 | None:intergenic | 25.0% |
| !!! | TAAAAGTTCCCAGTTTTATA+GGG | + | chr3_2:29524914-29524933 | None:intergenic | 25.0% |
| !!! | TTAAAAGTTCCCAGTTTTAT+AGG | + | chr3_2:29524915-29524934 | None:intergenic | 25.0% |
| !! | AGTCCTTACTTAATTTTCAT+AGG | - | chr3_2:29524939-29524958 | Msa0401970:intron | 25.0% |
| !! | AAACAAACTTTGTTGTAACA+AGG | + | chr3_2:29525005-29525024 | None:intergenic | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | + | chr3_2:29525399-29525418 | None:intergenic | 25.0% |
| !! | AGTAGGGTTAAATATGTTTT+TGG | + | chr3_2:29525415-29525434 | None:intergenic | 25.0% |
| ! | AAATATCATCTCTCTTTAAC+AGG | - | chr3_2:29525755-29525774 | Msa0401970:intron | 25.0% |
| ! | AATATCATCTCTCTTTAACA+GGG | - | chr3_2:29525756-29525775 | Msa0401970:intron | 25.0% |
| ! | GTGACCAAATACTATTTATT+TGG | + | chr3_2:29525939-29525958 | None:intergenic | 25.0% |
| ! | CATAACTACTTTACTCTAAA+AGG | + | chr3_2:29526137-29526156 | None:intergenic | 25.0% |
| ! | AACCAATGACTCAATTAATT+CGG | + | chr3_2:29526178-29526197 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGAAT+TGG | - | chr3_2:29526236-29526255 | Msa0401970:intron | 25.0% |
| ! | CTTCATACCGAATATATAAA+TGG | - | chr3_2:29526655-29526674 | Msa0401970:intron | 25.0% |
| ! | TCAGAAGCCATTTATATATT+CGG | + | chr3_2:29526665-29526684 | None:intergenic | 25.0% |
| ! | TCAGTATATATCATGTTTAG+GGG | - | chr3_2:29526922-29526941 | Msa0401970:intron | 25.0% |
| ! | AGCTCAATGTTTATTATTTG+GGG | + | chr3_2:29527036-29527055 | None:intergenic | 25.0% |
| ! | GTAGCTCAATGTTTATTATT+TGG | + | chr3_2:29527038-29527057 | None:intergenic | 25.0% |
| !!! | TTTTGCAATTGAACTTGTTT+GGG | + | chr3_2:29527061-29527080 | None:intergenic | 25.0% |
| !!! | TTTTTGCAATTGAACTTGTT+TGG | + | chr3_2:29527062-29527081 | None:intergenic | 25.0% |
| !!! | TTGTATTGGTTTGATACTTT+TGG | - | chr3_2:29527132-29527151 | Msa0401970:intron | 25.0% |
| ! | ATAGTCATAGACAACTTAAA+TGG | - | chr3_2:29527208-29527227 | Msa0401970:intron | 25.0% |
| ! | GGCAATTATAGATGAAATAT+TGG | - | chr3_2:29527328-29527347 | Msa0401970:intron | 25.0% |
| !!! | TGCATACTTTTTAGTTTCAA+TGG | - | chr3_2:29527723-29527742 | Msa0401970:intron | 25.0% |
| ! | AAATCCCACTAATTTGAAAA+GGG | + | chr3_2:29528129-29528148 | None:intergenic | 25.0% |
| ! | TTGTTAGATTTCAACTAATG+GGG | - | chr3_2:29528147-29528166 | Msa0401970:intron | 25.0% |
| ! | AAAGATTCAAAACAAATCGA+GGG | + | chr3_2:29528418-29528437 | None:intergenic | 25.0% |
| ! | AAAAGATTCAAAACAAATCG+AGG | + | chr3_2:29528419-29528438 | None:intergenic | 25.0% |
| ! | TAAAAATACTTATTTGGGGA+AGG | - | chr3_2:29528502-29528521 | Msa0401970:intron | 25.0% |
| ! | CATACGAAAATGGTATTATT+TGG | - | chr3_2:29528794-29528813 | Msa0401970:CDS | 25.0% |
| ! | GTTAACAATGGAGTTAATTA+TGG | + | chr3_2:29529189-29529208 | None:intergenic | 25.0% |
| ! | AATTAACTCCATTGTTAACT+TGG | - | chr3_2:29529190-29529209 | Msa0401970:CDS | 25.0% |
| !!! | CATATTTTTTGTTCTTGCAT+GGG | + | chr3_2:29529372-29529391 | None:intergenic | 25.0% |
| GATTAGGTCAGAGAAAATAA+GGG | + | chr3_2:29523139-29523158 | None:intergenic | 30.0% | |
| TTACACATACATTCTTCGAT+TGG | + | chr3_2:29523301-29523320 | None:intergenic | 30.0% | |
| TCGAAGAATGTATGTGTAAT+CGG | - | chr3_2:29523302-29523321 | Msa0401970:exon | 30.0% | |
| ! | TTCTTTTCTTATCTCTCTTG+CGG | + | chr3_2:29523351-29523370 | None:intergenic | 30.0% |
| CTAGAACAAAATCATGACAT+TGG | - | chr3_2:29523389-29523408 | Msa0401970:CDS | 30.0% | |
| GAAAAGAGTTTCTACCTAAA+GGG | + | chr3_2:29523457-29523476 | None:intergenic | 30.0% | |
| AGAAAAGAGTTTCTACCTAA+AGG | + | chr3_2:29523458-29523477 | None:intergenic | 30.0% | |
| ! | TTTCCATTTTCTACCAAGAA+AGG | - | chr3_2:29523548-29523567 | Msa0401970:intron | 30.0% |
| AGATGATAAGGTTCAATACT+AGG | - | chr3_2:29523651-29523670 | Msa0401970:intron | 30.0% | |
| GATGATAAGGTTCAATACTA+GGG | - | chr3_2:29523652-29523671 | Msa0401970:intron | 30.0% | |
| CAAAGAGAAGAATTGTGATA+AGG | - | chr3_2:29523742-29523761 | Msa0401970:intron | 30.0% | |
| ATCATGTTACCTTTAATGGA+TGG | + | chr3_2:29523830-29523849 | None:intergenic | 30.0% | |
| TAGCAAAACCCATTAACTAT+TGG | - | chr3_2:29523977-29523996 | Msa0401970:intron | 30.0% | |
| TTCTTGCACCAATAGTTAAT+GGG | + | chr3_2:29523988-29524007 | None:intergenic | 30.0% | |
| TTTCTTGCACCAATAGTTAA+TGG | + | chr3_2:29523989-29524008 | None:intergenic | 30.0% | |
| AAATGCATAGTCACATTTAC+AGG | - | chr3_2:29524208-29524227 | Msa0401970:intron | 30.0% | |
| AAATATACCTCATTGTGGAA+TGG | + | chr3_2:29524243-29524262 | None:intergenic | 30.0% | |
| ATAGCAAATATACCTCATTG+TGG | + | chr3_2:29524248-29524267 | None:intergenic | 30.0% | |
| ATATCTATAAACTATCCACG+TGG | - | chr3_2:29524405-29524424 | Msa0401970:intron | 30.0% | |
| ATTTATATAACAGGTTGTGG+TGG | - | chr3_2:29524569-29524588 | Msa0401970:intron | 30.0% | |
| !! | CTAGTTCTATTGCTATATCT+TGG | + | chr3_2:29524617-29524636 | None:intergenic | 30.0% |
| AGATATAGCAATAGAACTAG+TGG | - | chr3_2:29524617-29524636 | Msa0401970:intron | 30.0% | |
| GATATAGCAATAGAACTAGT+GGG | - | chr3_2:29524618-29524637 | Msa0401970:intron | 30.0% | |
| ATCTCTTGATACTATAACTG+AGG | - | chr3_2:29524671-29524690 | Msa0401970:CDS | 30.0% | |
| TCTCTTGATACTATAACTGA+GGG | - | chr3_2:29524672-29524691 | Msa0401970:CDS | 30.0% | |
| CTGTCTCATTATATTAAGTG+TGG | - | chr3_2:29524817-29524836 | Msa0401970:intron | 30.0% | |
| ! | ATTAAGTGTGGTTTAAGGTT+AGG | - | chr3_2:29524829-29524848 | Msa0401970:intron | 30.0% |
| !! | TTTTTGGTCCCTATAAAACT+GGG | - | chr3_2:29524903-29524922 | Msa0401970:intron | 30.0% |
| !!! | TTTACGACAATTTTTTGCAG+AGG | - | chr3_2:29525203-29525222 | Msa0401970:intron | 30.0% |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | + | chr3_2:29525400-29525419 | None:intergenic | 30.0% |
| GAGTTTGTCATCATAATTAG+AGG | - | chr3_2:29525583-29525602 | Msa0401970:intron | 30.0% | |
| ATATCATCTCTCTTTAACAG+GGG | - | chr3_2:29525757-29525776 | Msa0401970:intron | 30.0% | |
| ACTCTATTGTGTATTGTACA+GGG | - | chr3_2:29525879-29525898 | Msa0401970:intron | 30.0% | |
| GTCCTAGAGAAATTCTAATA+TGG | - | chr3_2:29525905-29525924 | Msa0401970:intron | 30.0% | |
| GACCATATTAGAATTTCTCT+AGG | + | chr3_2:29525910-29525929 | None:intergenic | 30.0% | |
| ACCAATGACTCAATTAATTC+GGG | + | chr3_2:29526177-29526196 | None:intergenic | 30.0% | |
| TGTATAAATATAGGGGAAAG+TGG | - | chr3_2:29526221-29526240 | Msa0401970:intron | 30.0% | |
| AGTAAATGACTCAGTTAATC+CGG | - | chr3_2:29526381-29526400 | Msa0401970:intron | 30.0% | |
| !! | TCATCAATTGGTTGTTTTGT+AGG | - | chr3_2:29526440-29526459 | Msa0401970:intron | 30.0% |
| TAAGAGATGGAGAAAGTAAA+GGG | + | chr3_2:29526555-29526574 | None:intergenic | 30.0% | |
| !! | TCTCCATCTCTTACTTTTAT+AGG | - | chr3_2:29526562-29526581 | Msa0401970:intron | 30.0% |
| ATGCCTATAAAAGTAAGAGA+TGG | + | chr3_2:29526568-29526587 | None:intergenic | 30.0% | |
| ! | TTTTATAGGCATCCCTAAAA+AGG | - | chr3_2:29526576-29526595 | Msa0401970:intron | 30.0% |
| ! | TTTTTCTCAAATAGACGTGT+CGG | - | chr3_2:29526797-29526816 | Msa0401970:intron | 30.0% |
| ! | TCATATGTGTTAGCGTTTTA+TGG | - | chr3_2:29526835-29526854 | Msa0401970:intron | 30.0% |
| GGTCTGTATGTATTTATATC+CGG | - | chr3_2:29527007-29527026 | Msa0401970:intron | 30.0% | |
| ! | TTTGCAATTGAACTTGTTTG+GGG | + | chr3_2:29527060-29527079 | None:intergenic | 30.0% |
| AAATCGCTATTTAGAAACGT+TGG | + | chr3_2:29527374-29527393 | None:intergenic | 30.0% | |
| TCATATACAAACATGATCAG+CGG | + | chr3_2:29527649-29527668 | None:intergenic | 30.0% | |
| GTTTGTATATGAGTATGAGT+AGG | - | chr3_2:29527657-29527676 | Msa0401970:intron | 30.0% | |
| ! | TAGGTACTTGGTAGATTTTA+AGG | - | chr3_2:29527676-29527695 | Msa0401970:intron | 30.0% |
| ! | ATGAGTGTACTACAGATTTT+AGG | - | chr3_2:29527789-29527808 | Msa0401970:intron | 30.0% |
| !! | GAAAAAAGTATTGCCATCAT+GGG | - | chr3_2:29527863-29527882 | Msa0401970:intron | 30.0% |
| AAATCTCCAATATCATGAGT+AGG | + | chr3_2:29527945-29527964 | None:intergenic | 30.0% | |
| ! | TCATGATATTGGAGATTTTG+AGG | - | chr3_2:29527947-29527966 | Msa0401970:intron | 30.0% |
| TGCACCTATTTATACATAGA+TGG | - | chr3_2:29528049-29528068 | Msa0401970:intron | 30.0% | |
| GAAGCCATCTATGTATAAAT+AGG | + | chr3_2:29528056-29528075 | None:intergenic | 30.0% | |
| CAAATCCCACTAATTTGAAA+AGG | + | chr3_2:29528130-29528149 | None:intergenic | 30.0% | |
| TGTTAGATTTCAACTAATGG+GGG | - | chr3_2:29528148-29528167 | Msa0401970:intron | 30.0% | |
| ! | TTGTCATGTCTAACTTTTCT+AGG | - | chr3_2:29528373-29528392 | Msa0401970:CDS | 30.0% |
| AAGATTCAAAACAAATCGAG+GGG | + | chr3_2:29528417-29528436 | None:intergenic | 30.0% | |
| TGTTCATTCTCTTATCTCAA+CGG | - | chr3_2:29528580-29528599 | Msa0401970:intron | 30.0% | |
| !!! | GTTTAAGCACTTTTTAAGTC+GGG | + | chr3_2:29528673-29528692 | None:intergenic | 30.0% |
| !!! | GGTTTAAGCACTTTTTAAGT+CGG | + | chr3_2:29528674-29528693 | None:intergenic | 30.0% |
| GTGCATGATTGAATAAGATA+TGG | - | chr3_2:29528960-29528979 | Msa0401970:CDS | 30.0% | |
| TTGAATAAGATATGGTCCAT+TGG | - | chr3_2:29528968-29528987 | Msa0401970:CDS | 30.0% | |
| TAGTCCTACATCAGAATTAT+TGG | - | chr3_2:29528993-29529012 | Msa0401970:CDS | 30.0% | |
| TACACCAATAATTCTGATGT+AGG | + | chr3_2:29529000-29529019 | None:intergenic | 30.0% | |
| CCATAAATTAATGGAGCTAA+GGG | + | chr3_2:29529036-29529055 | None:intergenic | 30.0% | |
| TCCATAAATTAATGGAGCTA+AGG | + | chr3_2:29529037-29529056 | None:intergenic | 30.0% | |
| TTGCAGTATTGTGACAAATA+TGG | - | chr3_2:29529107-29529126 | Msa0401970:CDS | 30.0% | |
| ! | ACTTTTCTCCATTCTTGTAA+TGG | + | chr3_2:29529152-29529171 | None:intergenic | 30.0% |
| ATATGTCTCCAAGTTAACAA+TGG | + | chr3_2:29529201-29529220 | None:intergenic | 30.0% | |
| !!! | GCATATTTTTTGTTCTTGCA+TGG | + | chr3_2:29529373-29529392 | None:intergenic | 30.0% |
| !!! | GAAACAACTCTTTCGTTTTT+TGG | + | chr3_2:29529501-29529520 | None:intergenic | 30.0% |
| GGATTAGGTCAGAGAAAATA+AGG | + | chr3_2:29523140-29523159 | None:intergenic | 35.0% | |
| TCAAATTGGATTCTATTCCG+CGG | + | chr3_2:29523238-29523257 | None:intergenic | 35.0% | |
| TGGTTGTTGGACAAATATGT+TGG | + | chr3_2:29523262-29523281 | None:intergenic | 35.0% | |
| ACATATTTGTCCAACAACCA+TGG | - | chr3_2:29523262-29523281 | Msa0401970:three_prime_UTR | 35.0% | |
| GCAAGAGAGATAAGAAAAGA+AGG | - | chr3_2:29523350-29523369 | Msa0401970:CDS | 35.0% | |
| GAACAAAATCATGACATTGG+AGG | - | chr3_2:29523392-29523411 | Msa0401970:CDS | 35.0% | |
| CTACCTTTCTTGGTAGAAAA+TGG | + | chr3_2:29523554-29523573 | None:intergenic | 35.0% | |
| TAAGTATTTCAACATGGCCA+GGG | + | chr3_2:29523592-29523611 | None:intergenic | 35.0% | |
| ATAAGTATTTCAACATGGCC+AGG | + | chr3_2:29523593-29523612 | None:intergenic | 35.0% | |
| TTGGGTTAAGAGAGATGATA+AGG | - | chr3_2:29523639-29523658 | Msa0401970:intron | 35.0% | |
| GGTTAATTATGTTGGAATGC+TGG | - | chr3_2:29523673-29523692 | Msa0401970:intron | 35.0% | |
| GAAGAATTGTGATAAGGTTG+TGG | - | chr3_2:29523748-29523767 | Msa0401970:intron | 35.0% | |
| !! | CCTTTAATGGATGGCAATTT+TGG | + | chr3_2:29523821-29523840 | None:intergenic | 35.0% |
| CCAAAATTGCCATCCATTAA+AGG | - | chr3_2:29523818-29523837 | Msa0401970:intron | 35.0% | |
| TATGAGAAAATGTCGCACAT+CGG | + | chr3_2:29524071-29524090 | None:intergenic | 35.0% | |
| ! | TCTAATTACATTTTGCCACG+TGG | + | chr3_2:29524423-29524442 | None:intergenic | 35.0% |
| !! | ACAAAAGCTTTGGAAGCTTT+AGG | - | chr3_2:29524510-29524529 | Msa0401970:intron | 35.0% |
| !! | CAAAAGCTTTGGAAGCTTTA+GGG | - | chr3_2:29524511-29524530 | Msa0401970:intron | 35.0% |
| TTATCAATACCTGTGGATGA+AGG | + | chr3_2:29524734-29524753 | None:intergenic | 35.0% | |
| !!! | GTTTTTGGTCCCTATAAAAC+TGG | - | chr3_2:29524902-29524921 | Msa0401970:intron | 35.0% |
| ! | CACGTTTAGAACACTATGAA+AGG | - | chr3_2:29525068-29525087 | Msa0401970:intron | 35.0% |
| ! | GGAAGGGTAATTTTCATTGA+TGG | - | chr3_2:29525839-29525858 | Msa0401970:intron | 35.0% |
| GACTCTATTGTGTATTGTAC+AGG | - | chr3_2:29525878-29525897 | Msa0401970:intron | 35.0% | |
| ! | CTTTTGACAGCTTGATTTAC+TGG | + | chr3_2:29525981-29526000 | None:intergenic | 35.0% |
| ATGACTCAATTAATTCGGGA+CGG | + | chr3_2:29526173-29526192 | None:intergenic | 35.0% | |
| TCCCGAATTAATTGAGTCAT+TGG | - | chr3_2:29526173-29526192 | Msa0401970:intron | 35.0% | |
| GAGTTATAAAGGGCAAAAAG+TGG | - | chr3_2:29526283-29526302 | Msa0401970:intron | 35.0% | |
| GTAAATGACTCAGTTAATCC+GGG | - | chr3_2:29526382-29526401 | Msa0401970:intron | 35.0% | |
| ACGGAGCGAGTAATAATTAA+AGG | - | chr3_2:29526405-29526424 | Msa0401970:intron | 35.0% | |
| !! | TTCCTTTGGTGTCAAGAAAA+GGG | + | chr3_2:29526480-29526499 | None:intergenic | 35.0% |
| !! | ATTCCTTTGGTGTCAAGAAA+AGG | + | chr3_2:29526481-29526500 | None:intergenic | 35.0% |
| ! | TTTTCTTGACACCAAAGGAA+TGG | - | chr3_2:29526480-29526499 | Msa0401970:intron | 35.0% |
| GTAAGAGATGGAGAAAGTAA+AGG | + | chr3_2:29526556-29526575 | None:intergenic | 35.0% | |
| !!! | TATTTTTTTTGGGGTAGCCA+AGG | + | chr3_2:29526974-29526993 | None:intergenic | 35.0% |
| ! | TGTTTATTATTTGGGGTTGC+CGG | + | chr3_2:29527029-29527048 | None:intergenic | 35.0% |
| TATGAGTATGAGTAGGTACT+TGG | - | chr3_2:29527664-29527683 | Msa0401970:intron | 35.0% | |
| !! | GGAAAAAAGTATTGCCATCA+TGG | - | chr3_2:29527862-29527881 | Msa0401970:intron | 35.0% |
| ! | ACACTCCCTTTTCAAATTAG+TGG | - | chr3_2:29528121-29528140 | Msa0401970:intron | 35.0% |
| ! | CACTCCCTTTTCAAATTAGT+GGG | - | chr3_2:29528122-29528141 | Msa0401970:intron | 35.0% |
| CTATGGTTGATTGTGCTTAA+TGG | + | chr3_2:29528225-29528244 | None:intergenic | 35.0% | |
| AAATACTTATTTGGGGAAGG+TGG | - | chr3_2:29528505-29528524 | Msa0401970:intron | 35.0% | |
| !!! | CACACTAGCACTTTTAAGAT+TGG | + | chr3_2:29528695-29528714 | None:intergenic | 35.0% |
| AGTTAACTCACGCTGAATTA+AGG | - | chr3_2:29528745-29528764 | Msa0401970:intron | 35.0% | |
| !! | TACATCTGATCTTGATTTGG+CGG | + | chr3_2:29528855-29528874 | None:intergenic | 35.0% |
| GCATACATCTGATCTTGATT+TGG | + | chr3_2:29528858-29528877 | None:intergenic | 35.0% | |
| TAAATTAATGGAGCTAAGGG+TGG | + | chr3_2:29529033-29529052 | None:intergenic | 35.0% | |
| CCCTTAGCTCCATTAATTTA+TGG | - | chr3_2:29529033-29529052 | Msa0401970:CDS | 35.0% | |
| GACAAATATGGTGAGAATGT+AGG | - | chr3_2:29529119-29529138 | Msa0401970:CDS | 35.0% | |
| TTCTCCATTCTTGTAATGGT+GGG | + | chr3_2:29529148-29529167 | None:intergenic | 35.0% | |
| TTTCTCCATTCTTGTAATGG+TGG | + | chr3_2:29529149-29529168 | None:intergenic | 35.0% | |
| AGTGAAGTAAGGACTTTGAA+GGG | + | chr3_2:29529261-29529280 | None:intergenic | 35.0% | |
| AGAGAGAGATTGAGAGGATT+AGG | + | chr3_2:29523155-29523174 | None:intergenic | 40.0% | |
| !!! | TTTTTTCTCTCTTGCAACCG+CGG | - | chr3_2:29523218-29523237 | Msa0401970:three_prime_UTR | 40.0% |
| !! | ATTCTTCGATTGGTTCGTCT+CGG | + | chr3_2:29523291-29523310 | None:intergenic | 40.0% |
| AATGTATGTGTAATCGGAGC+TGG | - | chr3_2:29523308-29523327 | Msa0401970:exon | 40.0% | |
| ATCATGACATTGGAGGACAA+TGG | - | chr3_2:29523399-29523418 | Msa0401970:CDS | 40.0% | |
| ATAGAAGGTGAAGACCCTTT+AGG | - | chr3_2:29523440-29523459 | Msa0401970:CDS | 40.0% | |
| ACAATCTCCAAGAGAAGTCA+TGG | - | chr3_2:29523514-29523533 | Msa0401970:intron | 40.0% | |
| CAATCTCCAAGAGAAGTCAT+GGG | - | chr3_2:29523515-29523534 | Msa0401970:intron | 40.0% | |
| AATCTCCAAGAGAAGTCATG+GGG | - | chr3_2:29523516-29523535 | Msa0401970:intron | 40.0% | |
| GTTGGAATGCTGGATGATTA+TGG | - | chr3_2:29523683-29523702 | Msa0401970:intron | 40.0% | |
| CTGGATGATTATGGTGTTTG+TGG | - | chr3_2:29523692-29523711 | Msa0401970:intron | 40.0% | |
| TTGTGATAAGGTTGTGGAAG+AGG | - | chr3_2:29523754-29523773 | Msa0401970:intron | 40.0% | |
| ! | TGGTTTAGAGTAATGACCAG+TGG | + | chr3_2:29523801-29523820 | None:intergenic | 40.0% |
| AATGCTCAGGAATGGATACA+TGG | - | chr3_2:29524175-29524194 | Msa0401970:intron | 40.0% | |
| GTATTATAGAGCAGGACTGT+CGG | + | chr3_2:29524469-29524488 | None:intergenic | 40.0% | |
| TATATAACAGGTTGTGGTGG+TGG | - | chr3_2:29524572-29524591 | Msa0401970:intron | 40.0% | |
| GTGGTTGGAAATTCCTTTAG+TGG | - | chr3_2:29524591-29524610 | Msa0401970:intron | 40.0% | |
| TGCTATATCTTGGCCACTAA+AGG | + | chr3_2:29524607-29524626 | None:intergenic | 40.0% | |
| AGAACTAGTGGGAATAGCAA+AGG | - | chr3_2:29524629-29524648 | Msa0401970:intron | 40.0% | |
| GTCAAGAAAAGGGAAGCTAT+AGG | + | chr3_2:29526470-29526489 | None:intergenic | 40.0% | |
| ! | TTCCCTTTTCTTGACACCAA+AGG | - | chr3_2:29526475-29526494 | Msa0401970:intron | 40.0% |
| TTCGATAACCACCATTCCTT+TGG | + | chr3_2:29526494-29526513 | None:intergenic | 40.0% | |
| GTTATCGAAGATGACAGAGT+GGG | - | chr3_2:29526505-29526524 | Msa0401970:intron | 40.0% | |
| TTATCGAAGATGACAGAGTG+GGG | - | chr3_2:29526506-29526525 | Msa0401970:intron | 40.0% | |
| ! | TGGAAAGTGTGCTCATACAA+AGG | + | chr3_2:29526532-29526551 | None:intergenic | 40.0% |
| CTCGCGAAAAATTTAAGCAG+GGG | + | chr3_2:29527621-29527640 | None:intergenic | 40.0% | |
| GCTCGCGAAAAATTTAAGCA+GGG | + | chr3_2:29527622-29527641 | None:intergenic | 40.0% | |
| AGCTCGCGAAAAATTTAAGC+AGG | + | chr3_2:29527623-29527642 | None:intergenic | 40.0% | |
| TTGCTTGGGACTCAAAGAAA+GGG | + | chr3_2:29527818-29527837 | None:intergenic | 40.0% | |
| ATTGCTTGGGACTCAAAGAA+AGG | + | chr3_2:29527819-29527838 | None:intergenic | 40.0% | |
| TTGAGCTATCCACATTGCTT+GGG | + | chr3_2:29527832-29527851 | None:intergenic | 40.0% | |
| ATTGAGCTATCCACATTGCT+TGG | + | chr3_2:29527833-29527852 | None:intergenic | 40.0% | |
| TGGATAGCTCAATTGCTTTC+TGG | - | chr3_2:29527840-29527859 | Msa0401970:intron | 40.0% | |
| GGATAGCTCAATTGCTTTCT+GGG | - | chr3_2:29527841-29527860 | Msa0401970:intron | 40.0% | |
| !! | AAAAGTATTGCCATCATGGG+AGG | - | chr3_2:29527866-29527885 | Msa0401970:intron | 40.0% |
| TTCATCATTTCCTCCCATGA+TGG | + | chr3_2:29527879-29527898 | None:intergenic | 40.0% | |
| GGAAATGATGAAATCCATCG+AGG | - | chr3_2:29527887-29527906 | Msa0401970:intron | 40.0% | |
| TACCATGAAAGAGAAGTAGC+AGG | - | chr3_2:29527915-29527934 | Msa0401970:intron | 40.0% | |
| GGCATTCCTACTCATGATAT+TGG | - | chr3_2:29527936-29527955 | Msa0401970:intron | 40.0% | |
| AACGGAAGTTAACTCACGTT+CGG | - | chr3_2:29528598-29528617 | Msa0401970:intron | 40.0% | |
| CAATCATGCACTTGTAGATC+TGG | + | chr3_2:29528951-29528970 | None:intergenic | 40.0% | |
| GAGTGAAGTAAGGACTTTGA+AGG | + | chr3_2:29529262-29529281 | None:intergenic | 40.0% | |
| AGTCCTTACTTCACTCAACT+TGG | - | chr3_2:29529266-29529285 | Msa0401970:CDS | 40.0% | |
| ! | AGTCCAAGTTGAGTGAAGTA+AGG | + | chr3_2:29529272-29529291 | None:intergenic | 40.0% |
| TTATCTCTCTTGCGGCTACT+AGG | + | chr3_2:29523343-29523362 | None:intergenic | 45.0% | |
| CCTCATGTCTCTACCTTTCT+TGG | + | chr3_2:29523564-29523583 | None:intergenic | 45.0% | |
| CCAAGAAAGGTAGAGACATG+AGG | - | chr3_2:29523561-29523580 | Msa0401970:intron | 45.0% | |
| AGAAAGGTAGAGACATGAGG+AGG | - | chr3_2:29523564-29523583 | Msa0401970:intron | 45.0% | |
| ! | GGAAGAGGTTTTTGATGCAG+TGG | - | chr3_2:29523769-29523788 | Msa0401970:intron | 45.0% |
| TCCAGAACCATTCCACAATG+AGG | - | chr3_2:29524233-29524252 | Msa0401970:intron | 45.0% | |
| ACCTCATTGTGGAATGGTTC+TGG | + | chr3_2:29524237-29524256 | None:intergenic | 45.0% | |
| ! | GGAAGGGCATACAAAAGCTT+TGG | - | chr3_2:29524500-29524519 | Msa0401970:intron | 45.0% |
| ! | TACCTGTGGATGAAGGTGTA+AGG | + | chr3_2:29524727-29524746 | None:intergenic | 45.0% |
| TACCCTTCCATCCTCTTCAA+GGG | + | chr3_2:29525828-29525847 | None:intergenic | 45.0% | |
| TTACCCTTCCATCCTCTTCA+AGG | + | chr3_2:29525829-29525848 | None:intergenic | 45.0% | |
| CTCAATTAATTCGGGACGGA+AGG | + | chr3_2:29526169-29526188 | None:intergenic | 45.0% | |
| ATGACTCAGTTAATCCGGGA+CGG | - | chr3_2:29526386-29526405 | Msa0401970:intron | 45.0% | |
| AATTATTACTCGCTCCGTCC+CGG | + | chr3_2:29526403-29526422 | None:intergenic | 45.0% | |
| TCTTGACACCAAAGGAATGG+TGG | - | chr3_2:29526483-29526502 | Msa0401970:intron | 45.0% | |
| GGTTATCGAAGATGACAGAG+TGG | - | chr3_2:29526504-29526523 | Msa0401970:intron | 45.0% | |
| GAGATGGAGAAAGTAAAGGG+TGG | + | chr3_2:29526552-29526571 | None:intergenic | 45.0% | |
| TCTTTGAGTCCCAAGCAATG+TGG | - | chr3_2:29527820-29527839 | Msa0401970:intron | 45.0% | |
| TTCATGGTAGAACTCCTCGA+TGG | + | chr3_2:29527904-29527923 | None:intergenic | 45.0% | |
| ! | TGCCTGCTACTTCTCTTTCA+TGG | + | chr3_2:29527920-29527939 | None:intergenic | 45.0% |
| CTGATGTAGGACTAGACCAA+TGG | + | chr3_2:29528987-29529006 | None:intergenic | 45.0% | |
| GACTCCCACCATTACAAGAA+TGG | - | chr3_2:29529141-29529160 | Msa0401970:CDS | 45.0% | |
| TGGAGACATATCGAGACTCA+TGG | - | chr3_2:29529210-29529229 | Msa0401970:CDS | 45.0% | |
| GGAGACATATCGAGACTCAT+GGG | - | chr3_2:29529211-29529230 | Msa0401970:CDS | 45.0% | |
| ! | AGACTCATGGGATGATGATG+AGG | - | chr3_2:29529223-29529242 | Msa0401970:CDS | 45.0% |
| !! | AAGGACTTTGAAGGGCATCT+TGG | + | chr3_2:29529253-29529272 | None:intergenic | 45.0% |
| !!! | ATTTTTTTTATTTATATAAC+AGG | - | chr3_2:29524560-29524579 | Msa0401970:intron | 5.0% |
| !! | TTAATTAATAAATATTAGTA+GGG | + | chr3_2:29525431-29525450 | None:intergenic | 5.0% |
| !! | TTTAATTAATAAATATTAGT+AGG | + | chr3_2:29525432-29525451 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTCTTTTTTTTAT+TGG | - | chr3_2:29525649-29525668 | Msa0401970:intron | 5.0% |
| !!! | ATAATTGAATATTTTTTTTA+TGG | - | chr3_2:29527503-29527522 | Msa0401970:intron | 5.0% |
| GAGTGGAGAGAGAGATTGAG+AGG | + | chr3_2:29523161-29523180 | None:intergenic | 50.0% | |
| GTCTCGGAAACCATGGTTGT+TGG | + | chr3_2:29523275-29523294 | None:intergenic | 50.0% | |
| ! | TTGGTTCGTCTCGGAAACCA+TGG | + | chr3_2:29523282-29523301 | None:intergenic | 50.0% |
| GTGAACCCCATGACTTCTCT+TGG | + | chr3_2:29523524-29523543 | None:intergenic | 50.0% | |
| !! | TAACAGGTTGTGGTGGTGGT+TGG | - | chr3_2:29524576-29524595 | Msa0401970:intron | 50.0% |
| GACCTTACACCTTCATCCAC+AGG | - | chr3_2:29524722-29524741 | Msa0401970:CDS | 50.0% | |
| ATAGACGCCCTTGAAGAGGA+TGG | - | chr3_2:29525818-29525837 | Msa0401970:intron | 50.0% | |
| TGTCCAGTGATTTCGCTGTG+CGG | - | chr3_2:29526072-29526091 | Msa0401970:intron | 50.0% | |
| !! | TAGGGGCGTAGCCTTGTATA+TGG | - | chr3_2:29526939-29526958 | Msa0401970:intron | 50.0% |
| !! | AGGGGCGTAGCCTTGTATAT+GGG | - | chr3_2:29526940-29526959 | Msa0401970:intron | 50.0% |
| !! | GCGTAGCCTTGTATATGGGA+GGG | - | chr3_2:29526944-29526963 | Msa0401970:intron | 50.0% |
| !! | CGTAGCCTTGTATATGGGAG+GGG | - | chr3_2:29526945-29526964 | Msa0401970:intron | 50.0% |
| AGAGACATGAGGAGGTTCCC+TGG | - | chr3_2:29523572-29523591 | Msa0401970:intron | 55.0% | |
| GATGCAGTGGTTGTTGCCAC+TGG | - | chr3_2:29523782-29523801 | Msa0401970:intron | 55.0% | |
| AGCTAGCGACGCGTTACCTT+TGG | + | chr3_2:29523956-29523975 | None:intergenic | 55.0% | |
| GCAGATAGACGCCCTTGAAG+AGG | - | chr3_2:29525814-29525833 | Msa0401970:intron | 55.0% | |
| ACGCCCTTGAAGAGGATGGA+AGG | - | chr3_2:29525822-29525841 | Msa0401970:intron | 55.0% | |
| CGCCCTTGAAGAGGATGGAA+GGG | - | chr3_2:29525823-29525842 | Msa0401970:intron | 55.0% | |
| AGTCCGCACAGCGAAATCAC+TGG | + | chr3_2:29526078-29526097 | None:intergenic | 55.0% | |
| !! | GGCGTAGCCTTGTATATGGG+AGG | - | chr3_2:29526943-29526962 | Msa0401970:intron | 55.0% |
| GGCTACCCCTCCCATATACA+AGG | + | chr3_2:29526953-29526972 | None:intergenic | 55.0% | |
| GTATATGGGAGGGGTAGCCT+TGG | - | chr3_2:29526954-29526973 | Msa0401970:intron | 55.0% | |
| GTAATCGGAGCTGGACCAGC+AGG | - | chr3_2:29523317-29523336 | Msa0401970:CDS | 60.0% | |
| CTTGCGGCTACTAGGCCTGC+TGG | + | chr3_2:29523335-29523354 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 29523085 | 29529533 | 29523085 | ID=Msa0401970;Name=Msa0401970 |
| chr3_2 | mRNA | 29523085 | 29529533 | 29523085 | ID=Msa0401970-mRNA-1;Parent=Msa0401970;Name=Msa0401970-mRNA-1;_AED=0.17;_eAED=0.17;_QI=165|0.75|1|1|0.75|0.6|5|232|327 |
| chr3_2 | exon | 29523085 | 29523505 | 29523085 | ID=Msa0401970-mRNA-1:exon:5907;Parent=Msa0401970-mRNA-1 |
| chr3_2 | exon | 29524650 | 29524814 | 29524650 | ID=Msa0401970-mRNA-1:exon:5906;Parent=Msa0401970-mRNA-1 |
| chr3_2 | exon | 29528364 | 29528434 | 29528364 | ID=Msa0401970-mRNA-1:exon:5905;Parent=Msa0401970-mRNA-1 |
| chr3_2 | exon | 29528779 | 29529352 | 29528779 | ID=Msa0401970-mRNA-1:exon:5904;Parent=Msa0401970-mRNA-1 |
| chr3_2 | exon | 29529384 | 29529533 | 29529384 | ID=Msa0401970-mRNA-1:exon:5903;Parent=Msa0401970-mRNA-1 |
| chr3_2 | five_prime_UTR | 29529384 | 29529533 | 29529384 | ID=Msa0401970-mRNA-1:five_prime_utr;Parent=Msa0401970-mRNA-1 |
| chr3_2 | five_prime_UTR | 29529338 | 29529352 | 29529338 | ID=Msa0401970-mRNA-1:five_prime_utr;Parent=Msa0401970-mRNA-1 |
| chr3_2 | CDS | 29528779 | 29529337 | 29528779 | ID=Msa0401970-mRNA-1:cds;Parent=Msa0401970-mRNA-1 |
| chr3_2 | CDS | 29528364 | 29528434 | 29528364 | ID=Msa0401970-mRNA-1:cds;Parent=Msa0401970-mRNA-1 |
| chr3_2 | CDS | 29524650 | 29524814 | 29524650 | ID=Msa0401970-mRNA-1:cds;Parent=Msa0401970-mRNA-1 |
| chr3_2 | CDS | 29523317 | 29523505 | 29523317 | ID=Msa0401970-mRNA-1:cds;Parent=Msa0401970-mRNA-1 |
| chr3_2 | three_prime_UTR | 29523085 | 29523316 | 29523085 | ID=Msa0401970-mRNA-1:three_prime_utr;Parent=Msa0401970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
