AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0509550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509550 MtrunA17_Chr3g0114551 96.985 597 18 0 1 597 1 597 0.0 1184
Msa0509550 MtrunA17_Chr5g0438111 52.349 596 201 12 12 602 18 535 5.42e-171 496
Msa0509550 MtrunA17_Chr7g0244501 36.130 584 302 11 21 591 27 552 1.71e-85 277
Msa0509550 MtrunA17_Chr4g0013151 37.268 593 285 13 16 591 80 602 7.43e-80 264
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509550 AT2G40480.1 59.524 210 58 5 9 218 42 224 1.52e-64 221
Msa0509550 AT2G40480.1 42.958 284 114 9 332 602 268 516 5.02e-37 145
Msa0509550 AT2G38370.1 32.653 588 281 18 21 594 18 504 7.96e-47 172
Msa0509550 AT2G38370.2 32.483 588 282 17 21 594 35 521 1.28e-46 172
Msa0509550 AT3G56270.1 43.069 202 74 6 13 205 24 193 7.51e-34 134
Msa0509550 AT3G51720.1 39.286 196 68 5 24 218 11 156 3.73e-16 81.3

Find 145 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTATTCATGATTCATTAT+TGG 0.179098 3_4:-57960628 Msa0509550:three_prime_UTR
TCATGATCTTTCTCGGCTTT+TGG 0.225714 3_4:+57960772 None:intergenic
CCGAGACGGGGAGCGGAATT+AGG 0.242718 3_4:-57963597 Msa0509550:CDS
CGAATCTATTACCTTCTTCA+TGG 0.281170 3_4:+57961257 None:intergenic
CCAGGGAAGCTCTGCGGATA+TGG 0.282299 3_4:-57961089 Msa0509550:CDS
GGTTGGAACTCCTGTTATTA+AGG 0.293856 3_4:-57962087 Msa0509550:CDS
AAATATAAATTTATTTATAT+AGG 0.297340 3_4:+57960321 None:intergenic
ATCGCTCTCATGATCTTTCT+CGG 0.300229 3_4:+57960765 None:intergenic
TGCTCTTGATACACAGATAA+AGG 0.314596 3_4:+57961654 None:intergenic
TTGAAATTCCTCGTATTTGC+AGG 0.319482 3_4:+57961582 None:intergenic
GTAGATTATGTTGTTCTCAT+TGG 0.331774 3_4:-57960470 Msa0509550:three_prime_UTR
CAAATACGAGGAATTTCAAT+TGG 0.334836 3_4:-57961578 Msa0509550:CDS
TTATTCATCTCCTTAATAAC+AGG 0.336238 3_4:+57962077 None:intergenic
TTCTCTTCTTTCCATGGAAA+TGG 0.337745 3_4:-57963641 Msa0509550:exon
CTTTATTCTACATAAATAAC+AGG 0.340938 3_4:+57960589 None:intergenic
ATCATAGCCTTGGGGTTTAG+AGG 0.348939 3_4:+57961297 None:intergenic
GTGCTGTGTTTATTCTCTAC+AGG 0.353325 3_4:-57960434 Msa0509550:three_prime_UTR
TAAGTCCTCCACAATCCTTT+TGG 0.354264 3_4:+57962175 None:intergenic
TAGATTATGTTGTTCTCATT+GGG 0.355896 3_4:-57960469 Msa0509550:three_prime_UTR
AAGTCCATTAAAATCATATC+AGG 0.356258 3_4:+57961978 None:intergenic
CCCTCAGTGCTCGAAGCATT+TGG 0.357659 3_4:+57960812 None:intergenic
TTTCTTGCAGCATATCCTTC+AGG 0.358035 3_4:+57960877 None:intergenic
TAGTCATAGGGAGTGATATA+TGG 0.360360 3_4:+57960701 None:intergenic
GAAGTTGTTGGCCTCGAAAC+AGG 0.360536 3_4:+57960931 None:intergenic
AAAGTGACTTTCCGAGGTTC+AGG 0.361569 3_4:+57961339 None:intergenic
TTCTTACTTGGCCTAGTCAT+AGG 0.363235 3_4:+57960688 None:intergenic
GGCGCCGGCATCGCGAGTTT+CGG 0.364221 3_4:+57963618 None:intergenic
GCTGAAATCAAGGCTCTATC+TGG 0.364546 3_4:-57961390 Msa0509550:CDS
AAAAGGGAAAAGCTTTCATT+TGG 0.371180 3_4:+57963804 None:intergenic
GGATACCGGAGGTTGATCTA+AGG 0.371692 3_4:-57961068 Msa0509550:CDS
AAGGAAGCTGTCACTCGTTT+CGG 0.374804 3_4:-57963523 Msa0509550:CDS
TGTTCATTAGAATTTAAATC+TGG 0.378748 3_4:+57962110 None:intergenic
TGTTTATTCTCTACAGGGTA+TGG 0.392007 3_4:-57960428 Msa0509550:three_prime_UTR
TTTATTTATATAGGTACAAA+TGG 0.400872 3_4:+57960330 None:intergenic
GAAGATGTATATTCTGAAAC+TGG 0.401042 3_4:-57960508 Msa0509550:three_prime_UTR
TCCGCTCCCCGTCTCGGCGC+CGG 0.404429 3_4:+57963603 None:intergenic
CGCGATGCCGGCGCCGAGAC+GGG 0.405668 3_4:-57963610 Msa0509550:CDS
TTCTTCATGGTTGAATCCTC+AGG 0.408950 3_4:+57961270 None:intergenic
TGGCACCGAGGAAGAAGTTT+GGG 0.410408 3_4:-57960729 Msa0509550:CDS
TTGATAATCATGCAAATATG+AGG 0.412046 3_4:-57961740 Msa0509550:CDS
TCAGGCATCATCATAGCCTT+GGG 0.412922 3_4:+57961288 None:intergenic
ACATCTCTCATTGAAGTTGT+TGG 0.413419 3_4:+57960919 None:intergenic
GTGGCACCGAGGAAGAAGTT+TGG 0.414776 3_4:-57960730 Msa0509550:CDS
AGATTTAAATTCTAATGAAC+AGG 0.416037 3_4:-57962108 Msa0509550:CDS
TTTGCGTTCTCTTCTTTCCA+TGG 0.434742 3_4:-57963647 Msa0509550:exon
GCCGGCGCCGAGACGGGGAG+CGG 0.436976 3_4:-57963604 Msa0509550:CDS
TCGAAAAGAGTGATGAAGAT+TGG 0.437258 3_4:+57963689 None:intergenic
GTTGTTGACCTGGTTACATC+TGG 0.441935 3_4:+57960973 None:intergenic
CTCAGGCATCATCATAGCCT+TGG 0.443355 3_4:+57961287 None:intergenic
AACTTCTTCCTCGGTGCCAC+AGG 0.445731 3_4:+57960733 None:intergenic
GGAGGAACAAGCAGCTGAGT+TGG 0.447687 3_4:-57962258 Msa0509550:CDS
GCCGCCGTTCGAATCGGTTA+AGG 0.454866 3_4:-57963542 Msa0509550:CDS
TCTTACTTGGCCTAGTCATA+GGG 0.455279 3_4:+57960689 None:intergenic
TAGTCTGATTGTAAAATTGT+TGG 0.458836 3_4:-57960389 Msa0509550:three_prime_UTR
GAGATGAATAAAGAAACTAA+TGG 0.459896 3_4:-57962065 Msa0509550:CDS
CCATATCCGCAGAGCTTCCC+TGG 0.460170 3_4:+57961089 None:intergenic
AGATGAATAAAGAAACTAAT+GGG 0.460253 3_4:-57962064 Msa0509550:CDS
GCGAGTTTCGGCCATTTCCA+TGG 0.460432 3_4:+57963630 None:intergenic
ATGGCCGAAACTCGCGATGC+CGG 0.461341 3_4:-57963622 Msa0509550:CDS
TGGATTCCTCTTTACAGACT+TGG 0.464232 3_4:-57963487 Msa0509550:CDS
AAACAAGCCAAAGTGAATCT+TGG 0.466187 3_4:-57961954 Msa0509550:CDS
AGTAATACCAAGATTCACTT+TGG 0.470971 3_4:+57961947 None:intergenic
TACATCGCCGCCGTTCGAAT+CGG 0.473292 3_4:-57963548 Msa0509550:CDS
GTCACTCGTTTCGGTGGAAG+TGG 0.473470 3_4:-57963514 Msa0509550:CDS
GCGATGCCGGCGCCGAGACG+GGG 0.475406 3_4:-57963609 Msa0509550:CDS
CCTAATTCCGCTCCCCGTCT+CGG 0.481414 3_4:+57963597 None:intergenic
TGCTCGTCATACACAGATAA+GGG 0.484366 3_4:+57961501 None:intergenic
AAATACGAGGAATTTCAATT+GGG 0.493979 3_4:-57961577 Msa0509550:CDS
GTTTCGGTGGAAGTGGACCT+TGG 0.497039 3_4:-57963507 Msa0509550:CDS
ATAGAAAACAACATGCTGCC+AGG 0.498950 3_4:-57961107 Msa0509550:CDS
TCGCGATGCCGGCGCCGAGA+CGG 0.501945 3_4:-57963611 Msa0509550:CDS
CTTCTTTACCAGATGTAACC+AGG 0.504828 3_4:-57960981 Msa0509550:CDS
GATGTAACCAGGTCAACAAC+AGG 0.505517 3_4:-57960970 Msa0509550:CDS
TATTGCTCTTGCTGAAATCA+AGG 0.507819 3_4:-57961400 Msa0509550:CDS
CTTGATGTGCTCGAAGAACT+AGG 0.511053 3_4:-57962203 Msa0509550:CDS
TAAAGTATGTGTGGTGTGAC+TGG 0.511072 3_4:-57960571 Msa0509550:three_prime_UTR
GATGACATAGAGCATGAACT+TGG 0.512362 3_4:+57962002 None:intergenic
TGACTAGGCCAAGTAAGAAA+AGG 0.512763 3_4:-57960684 Msa0509550:CDS
AAAACTTGTATAAATACCAT+TGG 0.516410 3_4:-57960356 Msa0509550:three_prime_UTR
AATTCGCTCGGCCTGAACCT+CGG 0.517660 3_4:-57961350 Msa0509550:CDS
TGAAGGATATGCTGCAAGAA+AGG 0.521232 3_4:-57960875 Msa0509550:CDS
AGAGATCATTTGAATTCGCT+CGG 0.521555 3_4:-57961362 Msa0509550:CDS
AAGAACTAGGTGCAACCAAA+AGG 0.522233 3_4:-57962190 Msa0509550:CDS
TTTAAATGAAAAGATGAAGA+AGG 0.524255 3_4:-57961886 Msa0509550:CDS
TTAAATTCTAATGAACAGGT+TGG 0.526876 3_4:-57962104 Msa0509550:CDS
GTGCTCGTCATACACAGATA+AGG 0.529197 3_4:+57961500 None:intergenic
GCTTCTCCAAGTCTGTAAAG+AGG 0.530933 3_4:+57963481 None:intergenic
GTGAATTCCACATTAGATGA+TGG 0.533699 3_4:+57961765 None:intergenic
TGCTGTGTTTATTCTCTACA+GGG 0.534612 3_4:-57960433 Msa0509550:three_prime_UTR
AGCTCTGCGGATATGGATAC+CGG 0.537367 3_4:-57961082 Msa0509550:CDS
CCAAATGCTTCGAGCACTGA+GGG 0.539977 3_4:-57960812 Msa0509550:CDS
ATAATCAAAAGCCTGTTTCG+AGG 0.541883 3_4:-57960942 Msa0509550:CDS
TTCTCCCTTAGATCAACCTC+CGG 0.545981 3_4:+57961063 None:intergenic
GTGAATTCAACATGAGATGA+TGG 0.547205 3_4:+57961615 None:intergenic
CTGTGTATCAAGAGCAAGCA+AGG 0.553155 3_4:-57961647 Msa0509550:CDS
TGAGGATTCAACCATGAAGA+AGG 0.556534 3_4:-57961268 Msa0509550:CDS
GGCTGCAAGCCACCTCATCT+CGG 0.558105 3_4:+57961458 None:intergenic
TCCTTAACCGATTCGAACGG+CGG 0.565930 3_4:+57963541 None:intergenic
ACAAGCAGCTGAGTTGGAGA+AGG 0.567327 3_4:-57962252 Msa0509550:CDS
TTCTGAGCAGCACAGTAGAA+TGG 0.568892 3_4:-57961703 Msa0509550:CDS
GGGTATGGAGGTCTTACCAT+TGG 0.571442 3_4:-57960413 Msa0509550:three_prime_UTR
AAAGATGGAAGAAGCTGCAA+AGG 0.572753 3_4:-57961433 Msa0509550:CDS
ATGAACCCAAACTTCTTCCT+CGG 0.575518 3_4:+57960724 None:intergenic
AGCTGTGTCTGCTCAAGAGA+AGG 0.575900 3_4:-57961814 Msa0509550:CDS
AGAATTTAAATCTGGAGTTG+CGG 0.578490 3_4:+57962118 None:intergenic
ATATGCTGCAAGAAAGGAGA+TGG 0.581193 3_4:-57960869 Msa0509550:CDS
AGGTGCAACCAAAAGGATTG+TGG 0.584947 3_4:-57962183 Msa0509550:CDS
GACGGGGAGCGGAATTAGGA+AGG 0.587170 3_4:-57963593 Msa0509550:CDS
GAGTCTCGAGGAAGATCCAT+TGG 0.587750 3_4:+57963711 None:intergenic
TAGAAAACAACATGCTGCCA+GGG 0.587968 3_4:-57961106 Msa0509550:CDS
TCTCATTGGGTGCATTAGAG+TGG 0.590296 3_4:-57960456 Msa0509550:three_prime_UTR
GTGTTAAGACCGCCGAGATG+AGG 0.591497 3_4:-57961470 Msa0509550:CDS
GATACCGGAGGTTGATCTAA+GGG 0.595565 3_4:-57961067 Msa0509550:CDS
GAAGCTGTCACTCGTTTCGG+TGG 0.598287 3_4:-57963520 Msa0509550:CDS
GAATTCACCATCATCTAATG+TGG 0.599035 3_4:-57961772 Msa0509550:CDS
AGCAGAAAGCAAGTTCCTGA+AGG 0.605168 3_4:-57960892 Msa0509550:CDS
ATATATCACTCCCTATGACT+AGG 0.605664 3_4:-57960699 Msa0509550:CDS
TTATTCTCTACAGGGTATGG+AGG 0.606753 3_4:-57960425 Msa0509550:three_prime_UTR
AAAGCAAAAGTGACTTTCCG+AGG 0.609709 3_4:+57961333 None:intergenic
TATTACTATGAATGAACTTG+AGG 0.611180 3_4:-57961931 Msa0509550:CDS
TTAAGACCGCCGAGATGAGG+TGG 0.613955 3_4:-57961467 Msa0509550:CDS
GCTTGCATAAATTCCACCAA+TGG 0.616620 3_4:-57963727 Msa0509550:five_prime_UTR
CAGGCATCATCATAGCCTTG+GGG 0.618635 3_4:+57961289 None:intergenic
TAGGTACAAATGGTAACCAA+TGG 0.620459 3_4:+57960340 None:intergenic
TGATGAAGATTGGAGTCTCG+AGG 0.623665 3_4:+57963699 None:intergenic
TTTACAATCAGACTAACCAA+TGG 0.630279 3_4:+57960397 None:intergenic
AGTCTGTAAAGAGGAATCCA+AGG 0.630546 3_4:+57963490 None:intergenic
TTGATAATCCTGCAAATACG+AGG 0.631596 3_4:-57961590 Msa0509550:CDS
AGATGGAAGAGCATACTGAA+AGG 0.631710 3_4:-57960852 Msa0509550:CDS
TCTCGAGGAAGATCCATTGG+TGG 0.646313 3_4:+57963714 None:intergenic
CAAGGCTATGATGATGCCTG+AGG 0.659696 3_4:-57961286 Msa0509550:CDS
AAACTCTCCTCTAAACCCCA+AGG 0.665850 3_4:-57961304 Msa0509550:CDS
AGAGCATACTGAAAGGCGAA+AGG 0.668122 3_4:-57960845 Msa0509550:CDS
TGCAAGCCACCTCATCTCGG+CGG 0.669010 3_4:+57961461 None:intergenic
AAGCGTGATGATGATGTCGC+GGG 0.670483 3_4:+57963746 None:intergenic
TGCAACCAAAAGGATTGTGG+AGG 0.672791 3_4:-57962180 Msa0509550:CDS
TATGTAGAATAAAGTATGTG+TGG 0.674808 3_4:-57960580 Msa0509550:three_prime_UTR
GCTTCCTTAACCGATTCGAA+CGG 0.677120 3_4:+57963538 None:intergenic
CAAGCGTGATGATGATGTCG+CGG 0.678325 3_4:+57963745 None:intergenic
GCCAAATGCTTCGAGCACTG+AGG 0.688437 3_4:-57960813 Msa0509550:CDS
AATTCAACATGAGATGATGG+TGG 0.691633 3_4:+57961618 None:intergenic
GAGCGATCAAAAGCAGCCTG+TGG 0.701282 3_4:-57960749 Msa0509550:CDS
TCTGCGGATATGGATACCGG+AGG 0.701435 3_4:-57961079 Msa0509550:CDS
ATGCTGCCAGGGAAGCTCTG+CGG 0.717658 3_4:-57961095 Msa0509550:CDS
AAAAGCAGCCTGTGGCACCG+AGG 0.735993 3_4:-57960741 Msa0509550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAATTTATTTATAT+AGG + chr3_4:57963805-57963824 None:intergenic 0.0%
!!! AAATAAATTTATATTTTTTT+TGG - chr3_4:57963809-57963828 Msa0509550:five_prime_UTR 0.0%
!!! TAAATTTATATTTTTTTTGG+AGG - chr3_4:57963812-57963831 Msa0509550:five_prime_UTR 10.0%
!!! AAATTTATATTTTTTTTGGA+GGG - chr3_4:57963813-57963832 Msa0509550:five_prime_UTR 10.0%
!!! ATTGATAATTTTCACTATAT+TGG - chr3_4:57960789-57960808 Msa0509550:CDS 15.0%
!!! TTGATAATTTTCACTATATT+GGG - chr3_4:57960790-57960809 Msa0509550:CDS 15.0%
!! TTAACTTATTATTAGAGAAA+TGG - chr3_4:57961305-57961324 Msa0509550:CDS 15.0%
!! TAACTTATTATTAGAGAAAT+GGG - chr3_4:57961306-57961325 Msa0509550:CDS 15.0%
!! TCTAAAAATCATTAATTGTT+TGG - chr3_4:57961390-57961409 Msa0509550:CDS 15.0%
!! TTTATTTATATAGGTACAAA+TGG + chr3_4:57963796-57963815 None:intergenic 15.0%
!! TGAAGAAAAGAAAAAGAAAA+GGG + chr3_4:57960338-57960357 None:intergenic 20.0%
!!! AAATATTAAGCTTAAGTTGT+TGG - chr3_4:57960866-57960885 Msa0509550:CDS 20.0%
!!! AATATTAAGCTTAAGTTGTT+GGG - chr3_4:57960867-57960886 Msa0509550:CDS 20.0%
!! AGTTAAAAACCAAATACTTA+TGG + chr3_4:57960971-57960990 None:intergenic 20.0%
!! AAATACATATAACCTTACAA+GGG + chr3_4:57961004-57961023 None:intergenic 20.0%
!! TAAATACATATAACCTTACA+AGG + chr3_4:57961005-57961024 None:intergenic 20.0%
!! TATTTATAGAGAAGTTAGAA+AGG - chr3_4:57961019-57961038 Msa0509550:CDS 20.0%
!! ATTTATAGAGAAGTTAGAAA+GGG - chr3_4:57961020-57961039 Msa0509550:CDS 20.0%
!! CATGAAAAGAAAAATTGAAA+AGG + chr3_4:57961137-57961156 None:intergenic 20.0%
!!! CTTTTCAATTTTTCTTTTCA+TGG - chr3_4:57961135-57961154 Msa0509550:CDS 20.0%
!!! TATCTGAACTTTTTTTTTTG+TGG - chr3_4:57961177-57961196 Msa0509550:CDS 20.0%
!! AACTTATTATTAGAGAAATG+GGG - chr3_4:57961307-57961326 Msa0509550:CDS 20.0%
!!! CAATTAATGATTTTTAGAGA+TGG + chr3_4:57961388-57961407 None:intergenic 20.0%
!! TTAAATAGATCAATCATACA+GGG + chr3_4:57961730-57961749 None:intergenic 20.0%
!! TTTAAATAGATCAATCATAC+AGG + chr3_4:57961731-57961750 None:intergenic 20.0%
!!! AGATTTTGATATAAAGAAAG+TGG - chr3_4:57961844-57961863 Msa0509550:CDS 20.0%
!! TGTTCATTAGAATTTAAATC+TGG + chr3_4:57962016-57962035 None:intergenic 20.0%
!! AGATTTAAATTCTAATGAAC+AGG - chr3_4:57962015-57962034 Msa0509550:CDS 20.0%
!! AGATGAATAAAGAAACTAAT+GGG - chr3_4:57962059-57962078 Msa0509550:CDS 20.0%
!! TTTAAATGAAAAGATGAAGA+AGG - chr3_4:57962237-57962256 Msa0509550:CDS 20.0%
!! CTTTATTCTACATAAATAAC+AGG + chr3_4:57963537-57963556 None:intergenic 20.0%
!! AAAACTTGTATAAATACCAT+TGG - chr3_4:57963767-57963786 Msa0509550:five_prime_UTR 20.0%
! GTGAAGAAAAGAAAAAGAAA+AGG + chr3_4:57960339-57960358 None:intergenic 25.0%
! AGTGAAAATTATCAATAGTC+TGG + chr3_4:57960785-57960804 None:intergenic 25.0%
! GCTATAATCTAATGAGTATT+AGG - chr3_4:57960834-57960853 Msa0509550:CDS 25.0%
!! TTTTTATGTGATGATCTAGT+TGG - chr3_4:57960907-57960926 Msa0509550:CDS 25.0%
!!! AGTATTTGGTTTTTAACTTG+AGG - chr3_4:57960973-57960992 Msa0509550:CDS 25.0%
! AATCTCAGCACAAAAATAAA+TGG + chr3_4:57961286-57961305 None:intergenic 25.0%
! ATATACCTCTAACATAAAGA+AGG - chr3_4:57961438-57961457 Msa0509550:CDS 25.0%
! AATTACCTTCTTTATGTTAG+AGG + chr3_4:57961446-57961465 None:intergenic 25.0%
! AAAGAGAATAAATGATTTCC+AGG + chr3_4:57961687-57961706 None:intergenic 25.0%
!! TTTTGATATAAAGAAAGTGG+AGG - chr3_4:57961847-57961866 Msa0509550:CDS 25.0%
! TTAAATTCTAATGAACAGGT+TGG - chr3_4:57962019-57962038 Msa0509550:CDS 25.0%
! TTATTCATCTCCTTAATAAC+AGG + chr3_4:57962049-57962068 None:intergenic 25.0%
! GAGATGAATAAAGAAACTAA+TGG - chr3_4:57962058-57962077 Msa0509550:CDS 25.0%
!! ATCACCTGATATGATTTTAA+TGG - chr3_4:57962141-57962160 Msa0509550:CDS 25.0%
! AAGTCCATTAAAATCATATC+AGG + chr3_4:57962148-57962167 None:intergenic 25.0%
! TATTACTATGAATGAACTTG+AGG - chr3_4:57962192-57962211 Msa0509550:CDS 25.0%
!! TTGATAATCATGCAAATATG+AGG - chr3_4:57962383-57962402 Msa0509550:intron 25.0%
! AAATACGAGGAATTTCAATT+GGG - chr3_4:57962546-57962565 Msa0509550:intron 25.0%
! CGTTATTCATGATTCATTAT+TGG - chr3_4:57963495-57963514 Msa0509550:CDS 25.0%
! TATGTAGAATAAAGTATGTG+TGG - chr3_4:57963543-57963562 Msa0509550:CDS 25.0%
! TAGATTATGTTGTTCTCATT+GGG - chr3_4:57963654-57963673 Msa0509550:five_prime_UTR 25.0%
! TAGTCTGATTGTAAAATTGT+TGG - chr3_4:57963734-57963753 Msa0509550:five_prime_UTR 25.0%
AAAAGGGAAAAGCTTTCATT+TGG + chr3_4:57960322-57960341 None:intergenic 30.0%
!!! CTTCACTGAGTTTTTTAACT+CGG - chr3_4:57960353-57960372 Msa0509550:three_prime_UTR 30.0%
!! GTAGTAATAGAGTACTGAAA+TGG - chr3_4:57960812-57960831 Msa0509550:CDS 30.0%
!! TTGGATTAGTTTCTAGCTTA+TGG - chr3_4:57960926-57960945 Msa0509550:CDS 30.0%
! ACTATGCCTCAACATTTTAA+AGG + chr3_4:57961048-57961067 None:intergenic 30.0%
! TTTAAAATGTTGAGGCATAG+TGG - chr3_4:57961047-57961066 Msa0509550:CDS 30.0%
ACTTCGAGTCTTCTAAATTA+TGG + chr3_4:57961096-57961115 None:intergenic 30.0%
TTAGAGATGGTCAAGTTATA+TGG + chr3_4:57961375-57961394 None:intergenic 30.0%
TGCAATATCTGCAATGATTT+GGG - chr3_4:57961479-57961498 Msa0509550:CDS 30.0%
!! CAACTTCTTTAAGATGCTAA+CGG - chr3_4:57961583-57961602 Msa0509550:CDS 30.0%
TCAGCAAGTAAACTAACAAA+GGG + chr3_4:57961788-57961807 None:intergenic 30.0%
ATCAGCAAGTAAACTAACAA+AGG + chr3_4:57961789-57961808 None:intergenic 30.0%
! AGAATTTAAATCTGGAGTTG+CGG + chr3_4:57962008-57962027 None:intergenic 30.0%
AGTAATACCAAGATTCACTT+TGG + chr3_4:57962179-57962198 None:intergenic 30.0%
CAAATACGAGGAATTTCAAT+TGG - chr3_4:57962545-57962564 Msa0509550:intron 30.0%
! TTTCATGTCCTTTTCTTACT+TGG + chr3_4:57963450-57963469 None:intergenic 30.0%
!! GAAGATGTATATTCTGAAAC+TGG - chr3_4:57963615-57963634 Msa0509550:CDS 30.0%
!!! ATATTCTGAAACTGGCTTTT+TGG - chr3_4:57963623-57963642 Msa0509550:CDS 30.0%
!!! TATTCTGAAACTGGCTTTTT+GGG - chr3_4:57963624-57963643 Msa0509550:CDS 30.0%
GTAGATTATGTTGTTCTCAT+TGG - chr3_4:57963653-57963672 Msa0509550:five_prime_UTR 30.0%
TTTACAATCAGACTAACCAA+TGG + chr3_4:57963729-57963748 None:intergenic 30.0%
TCGAAAAGAGTGATGAAGAT+TGG + chr3_4:57960437-57960456 None:intergenic 35.0%
TTCTCTTCTTTCCATGGAAA+TGG - chr3_4:57960482-57960501 Msa0509550:three_prime_UTR 35.0%
ACTCAACTGCCATAAGTATT+TGG - chr3_4:57960959-57960978 Msa0509550:CDS 35.0%
TGTCATACTGAACTCTAGTT+AGG + chr3_4:57961211-57961230 None:intergenic 35.0%
TAACTAGAGTTCAGTATGAC+AGG - chr3_4:57961210-57961229 Msa0509550:CDS 35.0%
GTGCAATATCTGCAATGATT+TGG - chr3_4:57961478-57961497 Msa0509550:CDS 35.0%
TCCTCTGATAGATACGATAA+TGG + chr3_4:57961552-57961571 None:intergenic 35.0%
TGATATCCTTTCAGAATCAG+AGG - chr3_4:57961638-57961657 Msa0509550:CDS 35.0%
GATATCCTTTCAGAATCAGA+GGG - chr3_4:57961639-57961658 Msa0509550:CDS 35.0%
CAAGTAAACTAACAAAGGGA+AGG + chr3_4:57961784-57961803 None:intergenic 35.0%
AAACAAGCCAAAGTGAATCT+TGG - chr3_4:57962169-57962188 Msa0509550:CDS 35.0%
! GAAGAAGGAGAAAGTTTTTC+TGG - chr3_4:57962252-57962271 Msa0509550:CDS 35.0%
GAATTCACCATCATCTAATG+TGG - chr3_4:57962351-57962370 Msa0509550:intron 35.0%
GTGAATTCCACATTAGATGA+TGG + chr3_4:57962361-57962380 None:intergenic 35.0%
TGCTCTTGATACACAGATAA+AGG + chr3_4:57962472-57962491 None:intergenic 35.0%
! AATTCAACATGAGATGATGG+TGG + chr3_4:57962508-57962527 None:intergenic 35.0%
GTGAATTCAACATGAGATGA+TGG + chr3_4:57962511-57962530 None:intergenic 35.0%
! TTGATAATCCTGCAAATACG+AGG - chr3_4:57962533-57962552 Msa0509550:intron 35.0%
TTGAAATTCCTCGTATTTGC+AGG + chr3_4:57962544-57962563 None:intergenic 35.0%
TATTGCTCTTGCTGAAATCA+AGG - chr3_4:57962723-57962742 Msa0509550:intron 35.0%
AGAGATCATTTGAATTCGCT+CGG - chr3_4:57962761-57962780 Msa0509550:intron 35.0%
CGAATCTATTACCTTCTTCA+TGG + chr3_4:57962869-57962888 None:intergenic 35.0%
!! GCTGACTATTTTGAAAAAGC+TGG - chr3_4:57962921-57962940 Msa0509550:intron 35.0%
!! GACTATTTTGAAAAAGCTGG+AGG - chr3_4:57962924-57962943 Msa0509550:intron 35.0%
!! TATTTTGAAAAAGCTGGAGG+AGG - chr3_4:57962927-57962946 Msa0509550:intron 35.0%
!!! ATTTTTTCCTGTTGTTGACC+TGG + chr3_4:57963163-57963182 None:intergenic 35.0%
ATAATCAAAAGCCTGTTTCG+AGG - chr3_4:57963181-57963200 Msa0509550:intron 35.0%
ACATCTCTCATTGAAGTTGT+TGG + chr3_4:57963207-57963226 None:intergenic 35.0%
TAGTCATAGGGAGTGATATA+TGG + chr3_4:57963425-57963444 None:intergenic 35.0%
ATATATCACTCCCTATGACT+AGG - chr3_4:57963424-57963443 Msa0509550:intron 35.0%
!!! ATTCTGAAACTGGCTTTTTG+GGG - chr3_4:57963625-57963644 Msa0509550:CDS 35.0%
TGCTGTGTTTATTCTCTACA+GGG - chr3_4:57963690-57963709 Msa0509550:five_prime_UTR 35.0%
TGTTTATTCTCTACAGGGTA+TGG - chr3_4:57963695-57963714 Msa0509550:five_prime_UTR 35.0%
TAGGTACAAATGGTAACCAA+TGG + chr3_4:57963786-57963805 None:intergenic 35.0%
! TGTATGAGTGTGTGCTTTTC+TGG + chr3_4:57960299-57960318 None:intergenic 40.0%
GCTTGCATAAATTCCACCAA+TGG - chr3_4:57960396-57960415 Msa0509550:three_prime_UTR 40.0%
TTTGCGTTCTCTTCTTTCCA+TGG - chr3_4:57960476-57960495 Msa0509550:three_prime_UTR 40.0%
AGTCTGTAAAGAGGAATCCA+AGG + chr3_4:57960636-57960655 None:intergenic 40.0%
TGGATTCCTCTTTACAGACT+TGG - chr3_4:57960636-57960655 Msa0509550:three_prime_UTR 40.0%
!! AGGGAGCCTTTAAAATGTTG+AGG - chr3_4:57961039-57961058 Msa0509550:CDS 40.0%
CGAAGTCATTGCAGATATGT+AGG - chr3_4:57961110-57961129 Msa0509550:CDS 40.0%
GTATTGTCCACAAGCTCAAA+AGG + chr3_4:57961252-57961271 None:intergenic 40.0%
GCCATTATCGTATCTATCAG+AGG - chr3_4:57961548-57961567 Msa0509550:CDS 40.0%
AGATGCTAACGGCTATTTAG+AGG - chr3_4:57961594-57961613 Msa0509550:CDS 40.0%
GATGCTAACGGCTATTTAGA+GGG - chr3_4:57961595-57961614 Msa0509550:CDS 40.0%
TAACGGCTATTTAGAGGGAT+TGG - chr3_4:57961600-57961619 Msa0509550:CDS 40.0%
ATTTCCAGGACAAATGCGAA+TGG + chr3_4:57961673-57961692 None:intergenic 40.0%
! TCATACAGGGAAAGTACAAG+TGG + chr3_4:57961717-57961736 None:intergenic 40.0%
AAGAACTAGGTGCAACCAAA+AGG - chr3_4:57961933-57961952 Msa0509550:CDS 40.0%
! TAAGTCCTCCACAATCCTTT+TGG + chr3_4:57961951-57961970 None:intergenic 40.0%
GGTTGGAACTCCTGTTATTA+AGG - chr3_4:57962036-57962055 Msa0509550:CDS 40.0%
GATGACATAGAGCATGAACT+TGG + chr3_4:57962124-57962143 None:intergenic 40.0%
TGCTCGTCATACACAGATAA+GGG + chr3_4:57962625-57962644 None:intergenic 40.0%
! TGCAGCTTCTTCCATCTTTT+TGG + chr3_4:57962689-57962708 None:intergenic 40.0%
AAAGATGGAAGAAGCTGCAA+AGG - chr3_4:57962690-57962709 Msa0509550:intron 40.0%
AAAGCAAAAGTGACTTTCCG+AGG + chr3_4:57962793-57962812 None:intergenic 40.0%
TTCTTCATGGTTGAATCCTC+AGG + chr3_4:57962856-57962875 None:intergenic 40.0%
TGAGGATTCAACCATGAAGA+AGG - chr3_4:57962855-57962874 Msa0509550:intron 40.0%
ATAGAAAACAACATGCTGCC+AGG - chr3_4:57963016-57963035 Msa0509550:intron 40.0%
TAGAAAACAACATGCTGCCA+GGG - chr3_4:57963017-57963036 Msa0509550:intron 40.0%
CTTCTTTACCAGATGTAACC+AGG - chr3_4:57963142-57963161 Msa0509550:intron 40.0%
TTTCTTGCAGCATATCCTTC+AGG + chr3_4:57963249-57963268 None:intergenic 40.0%
TGAAGGATATGCTGCAAGAA+AGG - chr3_4:57963248-57963267 Msa0509550:intron 40.0%
ATATGCTGCAAGAAAGGAGA+TGG - chr3_4:57963254-57963273 Msa0509550:intron 40.0%
! AGATGGAAGAGCATACTGAA+AGG - chr3_4:57963271-57963290 Msa0509550:intron 40.0%
!! TTTCTCGGCTTTTGGTGATA+GGG + chr3_4:57963346-57963365 None:intergenic 40.0%
! TCATGATCTTTCTCGGCTTT+TGG + chr3_4:57963354-57963373 None:intergenic 40.0%
ATCGCTCTCATGATCTTTCT+CGG + chr3_4:57963361-57963380 None:intergenic 40.0%
ATGAACCCAAACTTCTTCCT+CGG + chr3_4:57963402-57963421 None:intergenic 40.0%
TCTTACTTGGCCTAGTCATA+GGG + chr3_4:57963437-57963456 None:intergenic 40.0%
TTCTTACTTGGCCTAGTCAT+AGG + chr3_4:57963438-57963457 None:intergenic 40.0%
TGACTAGGCCAAGTAAGAAA+AGG - chr3_4:57963439-57963458 Msa0509550:intron 40.0%
TAAAGTATGTGTGGTGTGAC+TGG - chr3_4:57963552-57963571 Msa0509550:CDS 40.0%
GTGCTGTGTTTATTCTCTAC+AGG - chr3_4:57963689-57963708 Msa0509550:five_prime_UTR 40.0%
TTATTCTCTACAGGGTATGG+AGG - chr3_4:57963698-57963717 Msa0509550:five_prime_UTR 40.0%
! ATGAGTGTGTGCTTTTCTGG+TGG + chr3_4:57960296-57960315 None:intergenic 45.0%
TGATGAAGATTGGAGTCTCG+AGG + chr3_4:57960427-57960446 None:intergenic 45.0%
!! GCTTCCTTAACCGATTCGAA+CGG + chr3_4:57960588-57960607 None:intergenic 45.0%
AAGGAAGCTGTCACTCGTTT+CGG - chr3_4:57960600-57960619 Msa0509550:three_prime_UTR 45.0%
GCTTCTCCAAGTCTGTAAAG+AGG + chr3_4:57960645-57960664 None:intergenic 45.0%
!! CTTATGGCAGTTGAGTTGAG+AGG + chr3_4:57960955-57960974 None:intergenic 45.0%
CTTGAGGAAAAGCCCTTGTA+AGG - chr3_4:57960989-57961008 Msa0509550:CDS 45.0%
AATCGATCTCTAGTCCACCA+AGG - chr3_4:57961338-57961357 Msa0509550:CDS 45.0%
ATATGGTATCAGATCCGCCT+TGG + chr3_4:57961358-57961377 None:intergenic 45.0%
GCAATCCCTCTGATTCTGAA+AGG + chr3_4:57961647-57961666 None:intergenic 45.0%
CTTGATGTGCTCGAAGAACT+AGG - chr3_4:57961920-57961939 Msa0509550:CDS 45.0%
AGGTGCAACCAAAAGGATTG+TGG - chr3_4:57961940-57961959 Msa0509550:CDS 45.0%
TGCAACCAAAAGGATTGTGG+AGG - chr3_4:57961943-57961962 Msa0509550:CDS 45.0%
TTCTGAGCAGCACAGTAGAA+TGG - chr3_4:57962420-57962439 Msa0509550:intron 45.0%
CTGTGTATCAAGAGCAAGCA+AGG - chr3_4:57962476-57962495 Msa0509550:intron 45.0%
GTGCTCGTCATACACAGATA+AGG + chr3_4:57962626-57962645 None:intergenic 45.0%
GCTGAAATCAAGGCTCTATC+TGG - chr3_4:57962733-57962752 Msa0509550:intron 45.0%
AAAGTGACTTTCCGAGGTTC+AGG + chr3_4:57962787-57962806 None:intergenic 45.0%
AAACTCTCCTCTAAACCCCA+AGG - chr3_4:57962819-57962838 Msa0509550:intron 45.0%
! ATCATAGCCTTGGGGTTTAG+AGG + chr3_4:57962829-57962848 None:intergenic 45.0%
TCAGGCATCATCATAGCCTT+GGG + chr3_4:57962838-57962857 None:intergenic 45.0%
! GATACCGGAGGTTGATCTAA+GGG - chr3_4:57963056-57963075 Msa0509550:intron 45.0%
TTCTCCCTTAGATCAACCTC+CGG + chr3_4:57963063-57963082 None:intergenic 45.0%
GTTGTTGACCTGGTTACATC+TGG + chr3_4:57963153-57963172 None:intergenic 45.0%
GATGTAACCAGGTCAACAAC+AGG - chr3_4:57963153-57963172 Msa0509550:intron 45.0%
AGCAGAAAGCAAGTTCCTGA+AGG - chr3_4:57963231-57963250 Msa0509550:intron 45.0%
AGAGCATACTGAAAGGCGAA+AGG - chr3_4:57963278-57963297 Msa0509550:intron 45.0%
!! CTTTCTCGGCTTTTGGTGAT+AGG + chr3_4:57963347-57963366 None:intergenic 45.0%
TCTCATTGGGTGCATTAGAG+TGG - chr3_4:57963667-57963686 Msa0509550:five_prime_UTR 45.0%
! AAGCGTGATGATGATGTCGC+GGG + chr3_4:57960380-57960399 None:intergenic 50.0%
! CAAGCGTGATGATGATGTCG+CGG + chr3_4:57960381-57960400 None:intergenic 50.0%
TCTCGAGGAAGATCCATTGG+TGG + chr3_4:57960412-57960431 None:intergenic 50.0%
GAGTCTCGAGGAAGATCCAT+TGG + chr3_4:57960415-57960434 None:intergenic 50.0%
!! TCCTTAACCGATTCGAACGG+CGG + chr3_4:57960585-57960604 None:intergenic 50.0%
! GCAAGAGCCTTTTGAGCTTG+TGG - chr3_4:57961242-57961261 Msa0509550:CDS 50.0%
CACTCCATTCGCATTTGTCC+TGG - chr3_4:57961666-57961685 Msa0509550:CDS 50.0%
! ACAAGCAGCTGAGTTGGAGA+AGG - chr3_4:57961871-57961890 Msa0509550:CDS 50.0%
AGCTGTGTCTGCTCAAGAGA+AGG - chr3_4:57962309-57962328 Msa0509550:intron 50.0%
! GTGGCTTGCAGCCAAAAAGA+TGG - chr3_4:57962675-57962694 Msa0509550:intron 50.0%
! CAGGCATCATCATAGCCTTG+GGG + chr3_4:57962837-57962856 None:intergenic 50.0%
CTCAGGCATCATCATAGCCT+TGG + chr3_4:57962839-57962858 None:intergenic 50.0%
! CAAGGCTATGATGATGCCTG+AGG - chr3_4:57962837-57962856 Msa0509550:intron 50.0%
AGCTCTGCGGATATGGATAC+CGG - chr3_4:57963041-57963060 Msa0509550:intron 50.0%
! GGATACCGGAGGTTGATCTA+AGG - chr3_4:57963055-57963074 Msa0509550:intron 50.0%
! GAAGTTGTTGGCCTCGAAAC+AGG + chr3_4:57963195-57963214 None:intergenic 50.0%
!! CCAAATGCTTCGAGCACTGA+GGG - chr3_4:57963311-57963330 Msa0509550:intron 50.0%
! TGGCACCGAGGAAGAAGTTT+GGG - chr3_4:57963394-57963413 Msa0509550:intron 50.0%
GGGTATGGAGGTCTTACCAT+TGG - chr3_4:57963710-57963729 Msa0509550:five_prime_UTR 50.0%
GCGAGTTTCGGCCATTTCCA+TGG + chr3_4:57960496-57960515 None:intergenic 55.0%
TACATCGCCGCCGTTCGAAT+CGG - chr3_4:57960575-57960594 Msa0509550:three_prime_UTR 55.0%
GAAGCTGTCACTCGTTTCGG+TGG - chr3_4:57960603-57960622 Msa0509550:three_prime_UTR 55.0%
GTCACTCGTTTCGGTGGAAG+TGG - chr3_4:57960609-57960628 Msa0509550:three_prime_UTR 55.0%
GTTTCGGTGGAAGTGGACCT+TGG - chr3_4:57960616-57960635 Msa0509550:three_prime_UTR 55.0%
CGATCTCTAGTCCACCAAGG+CGG - chr3_4:57961341-57961360 Msa0509550:CDS 55.0%
TGGTATCAGATCCGCCTTGG+TGG + chr3_4:57961355-57961374 None:intergenic 55.0%
GGAGGAACAAGCAGCTGAGT+TGG - chr3_4:57961865-57961884 Msa0509550:CDS 55.0%
GTGTTAAGACCGCCGAGATG+AGG - chr3_4:57962653-57962672 Msa0509550:intron 55.0%
TTAAGACCGCCGAGATGAGG+TGG - chr3_4:57962656-57962675 Msa0509550:intron 55.0%
AATTCGCTCGGCCTGAACCT+CGG - chr3_4:57962773-57962792 Msa0509550:intron 55.0%
TCTGCGGATATGGATACCGG+AGG - chr3_4:57963044-57963063 Msa0509550:intron 55.0%
! GCCAAATGCTTCGAGCACTG+AGG - chr3_4:57963310-57963329 Msa0509550:intron 55.0%
! CCCTCAGTGCTCGAAGCATT+TGG + chr3_4:57963314-57963333 None:intergenic 55.0%
GAGCGATCAAAAGCAGCCTG+TGG - chr3_4:57963374-57963393 Msa0509550:intron 55.0%
!! AACTTCTTCCTCGGTGCCAC+AGG + chr3_4:57963393-57963412 None:intergenic 55.0%
! GTGGCACCGAGGAAGAAGTT+TGG - chr3_4:57963393-57963412 Msa0509550:intron 55.0%
ATGGCCGAAACTCGCGATGC+CGG - chr3_4:57960501-57960520 Msa0509550:three_prime_UTR 60.0%
CCTAATTCCGCTCCCCGTCT+CGG + chr3_4:57960529-57960548 None:intergenic 60.0%
GACGGGGAGCGGAATTAGGA+AGG - chr3_4:57960530-57960549 Msa0509550:three_prime_UTR 60.0%
GCCGCCGTTCGAATCGGTTA+AGG - chr3_4:57960581-57960600 Msa0509550:three_prime_UTR 60.0%
TGCAAGCCACCTCATCTCGG+CGG + chr3_4:57962665-57962684 None:intergenic 60.0%
GGCTGCAAGCCACCTCATCT+CGG + chr3_4:57962668-57962687 None:intergenic 60.0%
ATGCTGCCAGGGAAGCTCTG+CGG - chr3_4:57963028-57963047 Msa0509550:intron 60.0%
CCATATCCGCAGAGCTTCCC+TGG + chr3_4:57963037-57963056 None:intergenic 60.0%
CCAGGGAAGCTCTGCGGATA+TGG - chr3_4:57963034-57963053 Msa0509550:intron 60.0%
AAAAGCAGCCTGTGGCACCG+AGG - chr3_4:57963382-57963401 Msa0509550:intron 60.0%
CCGAGACGGGGAGCGGAATT+AGG - chr3_4:57960526-57960545 Msa0509550:three_prime_UTR 65.0%
!! GGCGCCGGCATCGCGAGTTT+CGG + chr3_4:57960508-57960527 None:intergenic 70.0%
! TCGCGATGCCGGCGCCGAGA+CGG - chr3_4:57960512-57960531 Msa0509550:three_prime_UTR 75.0%
!! CGCGATGCCGGCGCCGAGAC+GGG - chr3_4:57960513-57960532 Msa0509550:three_prime_UTR 80.0%
!! GCGATGCCGGCGCCGAGACG+GGG - chr3_4:57960514-57960533 Msa0509550:three_prime_UTR 80.0%
! TCCGCTCCCCGTCTCGGCGC+CGG + chr3_4:57960523-57960542 None:intergenic 80.0%
!! GCCGGCGCCGAGACGGGGAG+CGG - chr3_4:57960519-57960538 Msa0509550:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 57960289 57963856 57960289 ID=Msa0509550;Name=Msa0509550
chr3_4 mRNA 57960289 57963856 57960289 ID=Msa0509550-mRNA-1;Parent=Msa0509550;Name=Msa0509550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=206|1|1|1|1|1|2|389|602
chr3_4 exon 57960289 57962312 57960289 ID=Msa0509550-mRNA-1:exon:13319;Parent=Msa0509550-mRNA-1
chr3_4 exon 57963477 57963856 57963477 ID=Msa0509550-mRNA-1:exon:13318;Parent=Msa0509550-mRNA-1
chr3_4 five_prime_UTR 57963651 57963856 57963651 ID=Msa0509550-mRNA-1:five_prime_utr;Parent=Msa0509550-mRNA-1
chr3_4 CDS 57963477 57963650 57963477 ID=Msa0509550-mRNA-1:cds;Parent=Msa0509550-mRNA-1
chr3_4 CDS 57960678 57962312 57960678 ID=Msa0509550-mRNA-1:cds;Parent=Msa0509550-mRNA-1
chr3_4 three_prime_UTR 57960289 57960677 57960289 ID=Msa0509550-mRNA-1:three_prime_utr;Parent=Msa0509550-mRNA-1
Gene Sequence

>Msa0509550

ATGGAAATGGCCGAAACTCGCGATGCCGGCGCCGAGACGGGGAGCGGAATTAGGAAGGTGAATTATCGAGCTGAGATTGATACATCGCCGCCGTTCGAATCGGTTAAGGAAGCTGTCACTCGTTTCGGTGGAAGTGGACCTTGGATTCCTCTTTACAGACTTGGAGAAGCTTTTAACAACTTTGAAGATTTTGATATAAAGAAAGTGGAGGAACAAGCAGCTGAGTTGGAGAAGGATTTGATTGTCAAAGAACTTGAAACACTTGATGTGCTCGAAGAACTAGGTGCAACCAAAAGGATTGTGGAGGACTTAAAGCAGCAGCTACAAAAAGAAGCATTGAAATTATCCGCAACTCCAGATTTAAATTCTAATGAACAGGTTGGAACTCCTGTTATTAAGGAGATGAATAAAGAAACTAATGGGAATAATGTCAACAACAATCAAGAACAGACATTGCATATTCCAAGTTCATGCTCTATGTCATCACCTGATATGATTTTAATGGACTTGAAACAAGCCAAAGTGAATCTTGGTATTACTATGAATGAACTTGAGGCGATACAATCGTCTGTTGAATCTTTAAATGAAAAGATGAAGAAGGAGAAAGTTTTTCTGGAGCAGACACGTGAAAAGCTAGCATCAAAGTTTGCAGCTGTGTCTGCTCAAGAGAAGGAACAAGATCAAGCAAGATTGAATTCACCATCATCTAATGTGGAATTCACTTTTGATAATCATGCAAATATGAGGAATTTCAATTGTGATTCTGAGCAGCACAGTAGAATGGTTGAGACAAGATCTGAAGTTTCAAAGCCTTTATCTGTGTATCAAGAGCAAGCAAGGTTGAGTCCACCATCATCTCATGTTGAATTCACTTTTGATAATCCTGCAAATACGAGGAATTTCAATTGGGATTATGAGAAGCACAATAGAATAGTTGAGACAAGAAGATCTGAAGATTCAAATCCCTTATCTGTGTATGACGAGCACAGTTTTAGTGTTAAGACCGCCGAGATGAGGTGGCTTGCAGCCAAAAAGATGGAAGAAGCTGCAAAGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTGGCGCTGAGAGATCATTTGAATTCGCTCGGCCTGAACCTCGGAAAGTCACTTTTGCTTTAGCAGAAAACTCTCCTCTAAACCCCAAGGCTATGATGATGCCTGAGGATTCAACCATGAAGAAGGTAATAGATTCGAAGTTTCAAATTGATGAAACAAATATTTCTAAGCTGACTATTTTGAAAAAGCTGGAGGAGGCATCTGAAGAAATTTTACAAAGCAAACAAGTCTTAACTGATGCTTTAAACAGAATTGAATCTGCAAATAGAAAACAACATGCTGCCAGGGAAGCTCTGCGGATATGGATACCGGAGGTTGATCTAAGGGAGAAAGCAGTGTATAACTCTTTTAACTTTGACAAGTTTAATCAAGCTAGAATTCGTCGAGATTCTTCTTTACCAGATGTAACCAGGTCAACAACAGGAAAAAATAATCAAAAGCCTGTTTCGAGGCCAACAACTTCAATGAGAGATGTACTTAGCAGAAAGCAAGTTCCTGAAGGATATGCTGCAAGAAAGGAGATGGAAGAGCATACTGAAAGGCGAAAGGTAGCATTGAGCCAAATGCTTCGAGCACTGAGGGAAGATCTAACCCTATCACCAAAAGCCGAGAAAGATCATGAGAGCGATCAAAAGCAGCCTGTGGCACCGAGGAAGAAGTTTGGGTTCATCCATATATCACTCCCTATGACTAGGCCAAGTAAGAAAAGGACATGA

Protein sequence

>Msa0509550

MEMAETRDAGAETGSGIRKVNYRAEIDTSPPFESVKEAVTRFGGSGPWIPLYRLGEAFNNFEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALKLSATPDLNSNEQVGTPVIKEMNKETNGNNVNNNQEQTLHIPSSCSMSSPDMILMDLKQAKVNLGITMNELEAIQSSVESLNEKMKKEKVFLEQTREKLASKFAAVSAQEKEQDQARLNSPSSNVEFTFDNHANMRNFNCDSEQHSRMVETRSEVSKPLSVYQEQARLSPPSSHVEFTFDNPANTRNFNWDYEKHNRIVETRRSEDSNPLSVYDEHSFSVKTAEMRWLAAKKMEEAAKAAEAIALAEIKALSGAERSFEFARPEPRKVTFALAENSPLNPKAMMMPEDSTMKKVIDSKFQIDETNISKLTILKKLEEASEEILQSKQVLTDALNRIESANRKQHAAREALRIWIPEVDLREKAVYNSFNFDKFNQARIRRDSSLPDVTRSTTGKNNQKPVSRPTTSMRDVLSRKQVPEGYAARKEMEEHTERRKVALSQMLRALREDLTLSPKAEKDHESDQKQPVAPRKKFGFIHISLPMTRPSKKRT*