Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162790 | XP_013467847.1 | 99.310 | 145 | 1 | 0 | 1 | 145 | 1 | 145 | 8.67e-101 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162790 | sp|Q9M1A8|RPB8B_ARATH | 61.702 | 141 | 53 | 1 | 5 | 145 | 7 | 146 | 3.35e-63 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162790 | I3SRI9 | 99.310 | 145 | 1 | 0 | 1 | 145 | 1 | 145 | 4.14e-101 | 295 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0162790 | Msa0183010 | 0.811325 | 7.409525e-51 | -8.615850e-47 |
| Msa0162790 | Msa0236700 | 0.828082 | 1.095691e-54 | -8.615850e-47 |
| Msa0162790 | Msa0277420 | -0.838715 | 2.438759e-57 | -8.615850e-47 |
| Msa0162790 | Msa0317270 | -0.811027 | 8.594983e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162790 | MtrunA17_Chr1g0177291 | 99.310 | 145 | 1 | 0 | 1 | 145 | 1 | 145 | 7.97e-105 | 295 |
| Msa0162790 | MtrunA17_Chr4g0075731 | 44.295 | 149 | 68 | 4 | 1 | 145 | 1 | 138 | 8.76e-34 | 115 |
| Msa0162790 | MtrunA17_Chr6g0487181 | 44.295 | 149 | 68 | 4 | 1 | 145 | 1 | 138 | 8.76e-34 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162790 | AT3G59600.1 | 61.702 | 141 | 53 | 1 | 5 | 145 | 7 | 146 | 3.40e-64 | 193 |
| Msa0162790 | AT1G54250.1 | 61.702 | 141 | 53 | 1 | 5 | 145 | 7 | 146 | 1.70e-63 | 191 |
Find 56 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTTCTGTCCCATCTTTA+AGG | 0.163307 | 1_4:+40235209 | None:intergenic |
| GATGATTTAAAACAAATATT+TGG | 0.195820 | 1_4:-40233081 | Msa0162790:three_prime_UTR |
| GGATTATAGTAGCCAGTATC+TGG | 0.234479 | 1_4:+40235147 | None:intergenic |
| TCACCGTTCCTTATCTTCTC+TGG | 0.270920 | 1_4:-40237169 | Msa0162790:five_prime_UTR |
| CACTTCTTGAAGATATCTTT+AGG | 0.284321 | 1_4:-40235450 | Msa0162790:CDS |
| AGGGAGTTGAATATTTCTTT+TGG | 0.310558 | 1_4:-40233296 | Msa0162790:CDS |
| AGAACAATGTATTTATTCAT+AGG | 0.330192 | 1_4:+40237263 | None:intergenic |
| ACTTCTTGAAGATATCTTTA+GGG | 0.337546 | 1_4:-40235449 | Msa0162790:CDS |
| CCTGATGGCACCCCAGATAC+TGG | 0.345604 | 1_4:-40235159 | Msa0162790:CDS |
| CAGCATGACTATCTAGTTTG+TGG | 0.355058 | 1_4:-40232985 | Msa0162790:three_prime_UTR |
| AATTTCTGTCCCATCTTTAA+GGG | 0.357752 | 1_4:+40235210 | None:intergenic |
| TCCAACCCCTCACTGATTCC+CGG | 0.400449 | 1_4:-40237207 | Msa0162790:five_prime_UTR |
| CCAGTATCTGGGGTGCCATC+AGG | 0.417512 | 1_4:+40235159 | None:intergenic |
| CACCGTTCCTTATCTTCTCT+GGG | 0.430082 | 1_4:-40237168 | Msa0162790:intron |
| AACTATGAATATGTCATGTA+TGG | 0.442578 | 1_4:-40234500 | Msa0162790:CDS |
| AAACAAGCTTTCTTCACTCT+TGG | 0.445244 | 1_4:+40233170 | None:intergenic |
| TACAGAGTAACAGAGGGTTC+AGG | 0.455659 | 1_4:-40234470 | Msa0162790:CDS |
| ATCAGTGAGGGGTTGGAGGA+AGG | 0.467684 | 1_4:+40237213 | None:intergenic |
| GATAGTCATGCTGCAATCCT+TGG | 0.470526 | 1_4:+40232995 | None:intergenic |
| GGTAATCATGAAGTAACTTC+CGG | 0.471518 | 1_4:-40233060 | Msa0162790:three_prime_UTR |
| TTGTTTCTAACATCAATGTA+TGG | 0.476810 | 1_4:-40233153 | Msa0162790:three_prime_UTR |
| TCAGTGAGGGGTTGGAGGAA+GGG | 0.477266 | 1_4:+40237214 | None:intergenic |
| TGAGCTATATCCCTTAAAGA+TGG | 0.478515 | 1_4:-40235220 | Msa0162790:CDS |
| GATTATAGTAGCCAGTATCT+GGG | 0.489343 | 1_4:+40235148 | None:intergenic |
| TGACTATCTAGTTTGTGGAT+TGG | 0.499748 | 1_4:-40232980 | Msa0162790:three_prime_UTR |
| GATAAGGAACGGTGACGGAT+AGG | 0.522552 | 1_4:+40237177 | None:intergenic |
| GCCGGGAATCAGTGAGGGGT+TGG | 0.527802 | 1_4:+40237206 | None:intergenic |
| TACCGTTTGTAATTCTAATG+TGG | 0.528373 | 1_4:-40233120 | Msa0162790:three_prime_UTR |
| AGATACTGGCTACTATAATC+CGG | 0.532782 | 1_4:-40235145 | Msa0162790:intron |
| GTGACGGATAGGAGCTGCGC+CGG | 0.537486 | 1_4:+40237188 | None:intergenic |
| GGGAATCAGTGAGGGGTTGG+AGG | 0.540631 | 1_4:+40237209 | None:intergenic |
| TGGGCTTCTGATGATGCTGA+AGG | 0.547894 | 1_4:-40233273 | Msa0162790:CDS |
| TGACTCACCCAGAGAAGATA+AGG | 0.550838 | 1_4:+40237161 | None:intergenic |
| ATCCACATTAGAATTACAAA+CGG | 0.550991 | 1_4:+40233118 | None:intergenic |
| GAGCTATATCCCTTAAAGAT+GGG | 0.563262 | 1_4:-40235219 | Msa0162790:CDS |
| AGTGAGCTGAACTGCTACAA+TGG | 0.571239 | 1_4:-40235479 | Msa0162790:exon |
| AATCCTTGGTCTGATATCAC+AGG | 0.579037 | 1_4:+40233009 | None:intergenic |
| GCTGCGCCGGGAATCAGTGA+GGG | 0.579296 | 1_4:+40237201 | None:intergenic |
| AGAGTAACAGAGGGTTCAGG+AGG | 0.579301 | 1_4:-40234467 | Msa0162790:CDS |
| ACAAGTTTGAGCTTGATCAA+AGG | 0.582436 | 1_4:-40233232 | Msa0162790:CDS |
| TGACGGATAGGAGCTGCGCC+GGG | 0.588610 | 1_4:+40237189 | None:intergenic |
| GGGCTTCTGATGATGCTGAA+GGG | 0.605774 | 1_4:-40233272 | Msa0162790:CDS |
| GAGAAGATAAGGAACGGTGA+CGG | 0.608615 | 1_4:+40237172 | None:intergenic |
| AAAGGTTGTATCTTCTGATG+AGG | 0.609382 | 1_4:-40233214 | Msa0162790:CDS |
| GTTCCAACACTCAATCCTGA+TGG | 0.623194 | 1_4:-40235174 | Msa0162790:CDS |
| GTAAACATGCATGAAAAGAA+CGG | 0.623774 | 1_4:+40232910 | None:intergenic |
| AGCTGCGCCGGGAATCAGTG+AGG | 0.624718 | 1_4:+40237200 | None:intergenic |
| CTGCGCCGGGAATCAGTGAG+GGG | 0.629726 | 1_4:+40237202 | None:intergenic |
| GTGCCATCAGGATTGAGTGT+TGG | 0.642346 | 1_4:+40235171 | None:intergenic |
| GAGCTGAACTGCTACAATGG+TGG | 0.645893 | 1_4:-40235476 | Msa0162790:exon |
| GAGTAACAGAGGGTTCAGGA+GGG | 0.649006 | 1_4:-40234466 | Msa0162790:CDS |
| CACCCAGAGAAGATAAGGAA+CGG | 0.651160 | 1_4:+40237166 | None:intergenic |
| AAGCTTTACAGAGTAACAGA+GGG | 0.656174 | 1_4:-40234476 | Msa0162790:CDS |
| AAAGCTTTACAGAGTAACAG+AGG | 0.672431 | 1_4:-40234477 | Msa0162790:CDS |
| ATTATAGTAGCCAGTATCTG+GGG | 0.679143 | 1_4:+40235149 | None:intergenic |
| ATTCCTGTGATATCAGACCA+AGG | 0.711879 | 1_4:-40233012 | Msa0162790:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATATTGTTTTTGATTTT+AGG | - | chr1_4:40233436-40233455 | Msa0162790:intron | 15.0% |
| !! | AAGATAAAATAAAGTTGAAT+TGG | - | chr1_4:40233562-40233581 | Msa0162790:intron | 15.0% |
| !!! | ATTTGAAATTTTGAGAAAAT+TGG | + | chr1_4:40234049-40234068 | None:intergenic | 15.0% |
| !!! | AGCATTTCTTAATATTTTTA+GGG | + | chr1_4:40234119-40234138 | None:intergenic | 15.0% |
| !! | CTATATAATAATCACTTAAT+AGG | - | chr1_4:40235279-40235298 | Msa0162790:CDS | 15.0% |
| !! | TAAATGTTTAATTACCAAAA+TGG | - | chr1_4:40235945-40235964 | Msa0162790:intron | 15.0% |
| !! | AAATGTTTAATTACCAAAAT+GGG | - | chr1_4:40235946-40235965 | Msa0162790:intron | 15.0% |
| !!! | CACTTTTTTTTAAATATCAT+AGG | + | chr1_4:40236192-40236211 | None:intergenic | 15.0% |
| !! | AATTTCATAAGAAATAGAAA+CGG | - | chr1_4:40236316-40236335 | Msa0162790:intron | 15.0% |
| !!! | TGTTCTTAATATATTACTTT+TGG | - | chr1_4:40236834-40236853 | Msa0162790:intron | 15.0% |
| !!! | GATGATTTAAAACAAATATT+TGG | - | chr1_4:40237073-40237092 | Msa0162790:intron | 15.0% |
| !! | AGAACAATGTATTTATTCAT+AGG | + | chr1_4:40232894-40232913 | None:intergenic | 20.0% |
| !!! | ACATTTGTTAATTGAGATTT+TGG | - | chr1_4:40233326-40233345 | Msa0162790:intron | 20.0% |
| !! | TTTATCTATAAGACTATGTT+AGG | + | chr1_4:40233863-40233882 | None:intergenic | 20.0% |
| !!! | TAATATTTTTAGGGTATGTT+TGG | + | chr1_4:40234110-40234129 | None:intergenic | 20.0% |
| !!! | CAGCATTTCTTAATATTTTT+AGG | + | chr1_4:40234120-40234139 | None:intergenic | 20.0% |
| !!! | CTTTTATTCAATTTAAGTGT+TGG | - | chr1_4:40234165-40234184 | Msa0162790:intron | 20.0% |
| !! | GAAACTTAAAAATAAGGTAA+AGG | + | chr1_4:40234655-40234674 | None:intergenic | 20.0% |
| !!! | TTATTTTTCGATTCTTTTAG+TGG | - | chr1_4:40234785-40234804 | Msa0162790:intron | 20.0% |
| !!! | TATTTTTCGATTCTTTTAGT+GGG | - | chr1_4:40234786-40234805 | Msa0162790:intron | 20.0% |
| !! | AAATAAGTTCAAATATCTTG+TGG | + | chr1_4:40235133-40235152 | None:intergenic | 20.0% |
| !! | AATAAGTTCAAAATAGCTTA+TGG | + | chr1_4:40235167-40235186 | None:intergenic | 20.0% |
| !!! | CAATTTTATTTTGCATTACT+TGG | + | chr1_4:40235514-40235533 | None:intergenic | 20.0% |
| !!! | TGCTAATTTTTTTATTTTCC+AGG | - | chr1_4:40235608-40235627 | Msa0162790:intron | 20.0% |
| !!! | GCTAATTTTTTTATTTTCCA+GGG | - | chr1_4:40235609-40235628 | Msa0162790:intron | 20.0% |
| !!! | TTTTATCAATTCATGTTGTT+TGG | - | chr1_4:40235899-40235918 | Msa0162790:intron | 20.0% |
| !!! | AGTATGTATGTATTTGTTTT+AGG | - | chr1_4:40235989-40236008 | Msa0162790:intron | 20.0% |
| !!! | ACATTGTTTCTGTAAAAAAA+AGG | - | chr1_4:40236102-40236121 | Msa0162790:intron | 20.0% |
| !! | AGTACTATAATGTTAATCAA+TGG | - | chr1_4:40236696-40236715 | Msa0162790:intron | 20.0% |
| !! | TCTTAAAAAAAAACTCTAAC+CGG | + | chr1_4:40236743-40236762 | None:intergenic | 20.0% |
| !!! | TTAATATATTACTTTTGGCA+GGG | - | chr1_4:40236839-40236858 | Msa0162790:intron | 20.0% |
| !!! | ATTTGTTTTAAATCATCATC+AGG | + | chr1_4:40237070-40237089 | None:intergenic | 20.0% |
| !!! | ATTTTGGTGCTTTTGTTTAT+TGG | - | chr1_4:40233342-40233361 | Msa0162790:intron | 25.0% |
| !!! | TTTTGGTGCTTTTGTTTATT+GGG | - | chr1_4:40233343-40233362 | Msa0162790:intron | 25.0% |
| ! | AATATTAAGAAATGCTGTCT+TGG | - | chr1_4:40234123-40234142 | Msa0162790:intron | 25.0% |
| !!! | CGGTTTTAGTGTTAAAAATA+CGG | - | chr1_4:40234319-40234338 | Msa0162790:intron | 25.0% |
| !!! | GGTTTTAGTGTTAAAAATAC+GGG | - | chr1_4:40234320-40234339 | Msa0162790:intron | 25.0% |
| !!! | CAAAGAAAATTGATTGGTTT+GGG | - | chr1_4:40234362-40234381 | Msa0162790:intron | 25.0% |
| ! | GTAGAGAATGAAATAAAGTA+GGG | + | chr1_4:40234450-40234469 | None:intergenic | 25.0% |
| ! | AGTAGAGAATGAAATAAAGT+AGG | + | chr1_4:40234451-40234470 | None:intergenic | 25.0% |
| ! | TAAACCAAAGACAAATCAAA+AGG | + | chr1_4:40234622-40234641 | None:intergenic | 25.0% |
| ! | ACTTAAAAATAAGGTAAAGG+TGG | + | chr1_4:40234652-40234671 | None:intergenic | 25.0% |
| ! | CTCACTGAAACTTAAAAATA+AGG | + | chr1_4:40234661-40234680 | None:intergenic | 25.0% |
| ! | ACTTCTTGAAGATATCTTTA+GGG | - | chr1_4:40234705-40234724 | Msa0162790:intron | 25.0% |
| ! | GACAAAAAGTTATTCGAAAA+AGG | - | chr1_4:40234748-40234767 | Msa0162790:intron | 25.0% |
| ! | ACGATTAATGAATGTAATAC+CGG | + | chr1_4:40235031-40235050 | None:intergenic | 25.0% |
| ! | TAACCAAATTTAGTACAGAT+AGG | + | chr1_4:40235447-40235466 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTCCAGGGTAAT+CGG | - | chr1_4:40235616-40235635 | Msa0162790:intron | 25.0% |
| ! | AACTATGAATATGTCATGTA+TGG | - | chr1_4:40235654-40235673 | Msa0162790:intron | 25.0% |
| !! | TGACAGAATTGATTTATGTT+TGG | - | chr1_4:40235855-40235874 | Msa0162790:intron | 25.0% |
| !! | TCTAGAGGTTTTTATATCAA+AGG | + | chr1_4:40236165-40236184 | None:intergenic | 25.0% |
| !! | AATATCATAGGTTTTTCTAG+AGG | + | chr1_4:40236180-40236199 | None:intergenic | 25.0% |
| ! | TATAAAACAAACTGTTACTG+CGG | - | chr1_4:40236225-40236244 | Msa0162790:intron | 25.0% |
| !!! | AAAGATAAAAGTGTTTAGGT+TGG | + | chr1_4:40236293-40236312 | None:intergenic | 25.0% |
| !!! | TTGCAAAGATAAAAGTGTTT+AGG | + | chr1_4:40236297-40236316 | None:intergenic | 25.0% |
| ! | CTTAAAAAAAAACTCTAACC+GGG | + | chr1_4:40236742-40236761 | None:intergenic | 25.0% |
| !!! | CTTAATATATTACTTTTGGC+AGG | - | chr1_4:40236838-40236857 | Msa0162790:intron | 25.0% |
| !! | AGTTGAATATTTCTTTTGGT+GGG | - | chr1_4:40236862-40236881 | Msa0162790:intron | 25.0% |
| !!! | TTGTTTCTAACATCAATGTA+TGG | - | chr1_4:40237001-40237020 | Msa0162790:intron | 25.0% |
| ! | ATCCACATTAGAATTACAAA+CGG | + | chr1_4:40237039-40237058 | None:intergenic | 25.0% |
| !! | TTTTTGTAGATAATTTCTGC+CGG | + | chr1_4:40237116-40237135 | None:intergenic | 25.0% |
| !!! | TTTTGATTTTAGGACCTGTT+TGG | - | chr1_4:40233446-40233465 | Msa0162790:intron | 30.0% |
| CATAAGTTGTTTATCCAAAC+AGG | + | chr1_4:40233463-40233482 | None:intergenic | 30.0% | |
| !! | AACACATACTAAGTTTTGTG+AGG | + | chr1_4:40233703-40233722 | None:intergenic | 30.0% |
| CACAAAACTTAGTATGTGTT+TGG | - | chr1_4:40233703-40233722 | Msa0162790:intron | 30.0% | |
| !! | TCAAAAAGTATCCAAATGTG+AGG | + | chr1_4:40233750-40233769 | None:intergenic | 30.0% |
| TAAGACTATGTTAGGCTTTA+TGG | + | chr1_4:40233855-40233874 | None:intergenic | 30.0% | |
| TTAGTGTTAAAAATACGGGT+TGG | - | chr1_4:40234324-40234343 | Msa0162790:intron | 30.0% | |
| !!! | AATTTTCTTTGGTTCGGTTT+GGG | + | chr1_4:40234353-40234372 | None:intergenic | 30.0% |
| ! | CCAATCAATTTTCTTTGGTT+CGG | + | chr1_4:40234359-40234378 | None:intergenic | 30.0% |
| ! | CCAAACCAATCAATTTTCTT+TGG | + | chr1_4:40234364-40234383 | None:intergenic | 30.0% |
| ! | CCAAAGAAAATTGATTGGTT+TGG | - | chr1_4:40234361-40234380 | Msa0162790:intron | 30.0% |
| !! | AAATTGATTGGTTTGGGTAT+TGG | - | chr1_4:40234368-40234387 | Msa0162790:intron | 30.0% |
| !! | AATTGATTGGTTTGGGTATT+GGG | - | chr1_4:40234369-40234388 | Msa0162790:intron | 30.0% |
| GGGATTTAGTAATTTACCAA+GGG | + | chr1_4:40234430-40234449 | None:intergenic | 30.0% | |
| AGGGATTTAGTAATTTACCA+AGG | + | chr1_4:40234431-40234450 | None:intergenic | 30.0% | |
| CACTTCTTGAAGATATCTTT+AGG | - | chr1_4:40234704-40234723 | Msa0162790:intron | 30.0% | |
| ! | CGAATAACTTTTTGTCATCT+GGG | + | chr1_4:40234744-40234763 | None:intergenic | 30.0% |
| ! | TCGAATAACTTTTTGTCATC+TGG | + | chr1_4:40234745-40234764 | None:intergenic | 30.0% |
| AATTTCTGTCCCATCTTTAA+GGG | + | chr1_4:40234947-40234966 | None:intergenic | 30.0% | |
| AAATTTCTGTCCCATCTTTA+AGG | + | chr1_4:40234948-40234967 | None:intergenic | 30.0% | |
| !!! | GTTTTTGGAACAATGTCAAA+GGG | - | chr1_4:40235387-40235406 | Msa0162790:intron | 30.0% |
| ATTACTTGGTTAAGAGCAAT+AGG | + | chr1_4:40235500-40235519 | None:intergenic | 30.0% | |
| ! | TTTTGCATATAGTGTGTGTT+TGG | - | chr1_4:40235778-40235797 | Msa0162790:intron | 30.0% |
| TGAGTTTGACAGAATTGATT+TGG | - | chr1_4:40235819-40235838 | Msa0162790:intron | 30.0% | |
| ! | ATCAATTCATGTTGTTTGGA+TGG | - | chr1_4:40235903-40235922 | Msa0162790:intron | 30.0% |
| !!! | CCAAGGTTGTATTTTGTTTT+TGG | + | chr1_4:40236138-40236157 | None:intergenic | 30.0% |
| CCAAAAACAAAATACAACCT+TGG | - | chr1_4:40236135-40236154 | Msa0162790:intron | 30.0% | |
| TTTATATCAAAGGTAAGCCA+AGG | + | chr1_4:40236155-40236174 | None:intergenic | 30.0% | |
| TTACTGCGGAAAAAATGAAT+GGG | - | chr1_4:40236239-40236258 | Msa0162790:intron | 30.0% | |
| GACTAAATTGAGAAATCACA+TGG | - | chr1_4:40236386-40236405 | Msa0162790:intron | 30.0% | |
| ! | CTCAAATCGATTCATATGAA+AGG | + | chr1_4:40236413-40236432 | None:intergenic | 30.0% |
| !! | CTTCAACTGGAATTGATTTT+GGG | - | chr1_4:40236458-40236477 | Msa0162790:intron | 30.0% |
| !! | TTCAACTGGAATTGATTTTG+GGG | - | chr1_4:40236459-40236478 | Msa0162790:intron | 30.0% |
| !! | GATCTTTTGATTGTGATACA+AGG | - | chr1_4:40236785-40236804 | Msa0162790:intron | 30.0% |
| !! | GTTGTACTATGATTGATTTG+TGG | - | chr1_4:40236807-40236826 | Msa0162790:intron | 30.0% |
| ! | AGGGAGTTGAATATTTCTTT+TGG | - | chr1_4:40236858-40236877 | Msa0162790:intron | 30.0% |
| ! | GAGTTGAATATTTCTTTTGG+TGG | - | chr1_4:40236861-40236880 | Msa0162790:intron | 30.0% |
| TACCGTTTGTAATTCTAATG+TGG | - | chr1_4:40237034-40237053 | Msa0162790:intron | 30.0% | |
| GTAAACATGCATGAAAAGAA+CGG | + | chr1_4:40237247-40237266 | None:intergenic | 30.0% | |
| GGGAAAAGGGTTGAAATATT+GGG | + | chr1_4:40233032-40233051 | None:intergenic | 35.0% | |
| AGGGAAAAGGGTTGAAATAT+TGG | + | chr1_4:40233033-40233052 | None:intergenic | 35.0% | |
| ! | ATGAAGTGAAGGTATAAGTG+GGG | + | chr1_4:40233072-40233091 | None:intergenic | 35.0% |
| ! | GATGAAGTGAAGGTATAAGT+GGG | + | chr1_4:40233073-40233092 | None:intergenic | 35.0% |
| !! | TAAGTTTTGTGAGGCTGTTT+GGG | + | chr1_4:40233694-40233713 | None:intergenic | 35.0% |
| !! | GGATACTTTTTGACGTGATT+TGG | - | chr1_4:40233757-40233776 | Msa0162790:intron | 35.0% |
| CAAACAAAAGTCGTTGGATT+GGG | + | chr1_4:40233895-40233914 | None:intergenic | 35.0% | |
| CTTTACCAAACAAAAGTCGT+TGG | + | chr1_4:40233901-40233920 | None:intergenic | 35.0% | |
| ATCACAATGAGAACTCTTCA+GGG | - | chr1_4:40233945-40233964 | Msa0162790:intron | 35.0% | |
| ! | TATGTTTGGAAGACAGGTTT+TGG | - | chr1_4:40233968-40233987 | Msa0162790:intron | 35.0% |
| ! | TATGTTTGGAAGTTGGGTTT+TGG | + | chr1_4:40234096-40234115 | None:intergenic | 35.0% |
| TTAGGGTATGTTTGGAAGTT+GGG | + | chr1_4:40234102-40234121 | None:intergenic | 35.0% | |
| ! | TTTAGGGTATGTTTGGAAGT+TGG | + | chr1_4:40234103-40234122 | None:intergenic | 35.0% |
| !!! | CAATTTTCTTTGGTTCGGTT+TGG | + | chr1_4:40234354-40234373 | None:intergenic | 35.0% |
| CCGAACCAAAGAAAATTGAT+TGG | - | chr1_4:40234356-40234375 | Msa0162790:intron | 35.0% | |
| !!! | ACGACCTTTTGATTTGTCTT+TGG | - | chr1_4:40234615-40234634 | Msa0162790:intron | 35.0% |
| TGAGCTATATCCCTTAAAGA+TGG | - | chr1_4:40234934-40234953 | Msa0162790:intron | 35.0% | |
| GAGCTATATCCCTTAAAGAT+GGG | - | chr1_4:40234935-40234954 | Msa0162790:intron | 35.0% | |
| ! | ACAGAAATTTTCTCTTGCAC+TGG | - | chr1_4:40234958-40234977 | Msa0162790:intron | 35.0% |
| ATTATAGTAGCCAGTATCTG+GGG | + | chr1_4:40235008-40235027 | None:intergenic | 35.0% | |
| GATTATAGTAGCCAGTATCT+GGG | + | chr1_4:40235009-40235028 | None:intergenic | 35.0% | |
| ! | AGATACTGGCTACTATAATC+CGG | - | chr1_4:40235009-40235028 | Msa0162790:intron | 35.0% |
| !! | CTTATTTTCATGAGCTCTCT+AGG | - | chr1_4:40235181-40235200 | Msa0162790:CDS | 35.0% |
| !!! | CGTTTTTGGAACAATGTCAA+AGG | - | chr1_4:40235386-40235405 | Msa0162790:intron | 35.0% |
| GAATACAGTGATGATTATCC+AGG | - | chr1_4:40235413-40235432 | Msa0162790:CDS | 35.0% | |
| GAGCCTATCTGTACTAAATT+TGG | - | chr1_4:40235441-40235460 | Msa0162790:CDS | 35.0% | |
| AAAGCTTTACAGAGTAACAG+AGG | - | chr1_4:40235677-40235696 | Msa0162790:intron | 35.0% | |
| AAGCTTTACAGAGTAACAGA+GGG | - | chr1_4:40235678-40235697 | Msa0162790:intron | 35.0% | |
| TGTAAACTGATACTCAAAGC+AGG | + | chr1_4:40235737-40235756 | None:intergenic | 35.0% | |
| GAGTATCAGTTTACAGAGAA+AGG | - | chr1_4:40235742-40235761 | Msa0162790:intron | 35.0% | |
| ! | ATGAACATTTGAGCCCATTT+TGG | + | chr1_4:40235962-40235981 | None:intergenic | 35.0% |
| GTTACTGCGGAAAAAATGAA+TGG | - | chr1_4:40236238-40236257 | Msa0162790:intron | 35.0% | |
| !! | TTGGAGAAGATAAGAGTACT+GGG | + | chr1_4:40236274-40236293 | None:intergenic | 35.0% |
| !! | ACCATGGTTGTTTTCTTCAA+AGG | - | chr1_4:40236364-40236383 | Msa0162790:intron | 35.0% |
| ! | TCCTTTGAAGAAAACAACCA+TGG | + | chr1_4:40236368-40236387 | None:intergenic | 35.0% |
| !! | GCTTCAACTGGAATTGATTT+TGG | - | chr1_4:40236457-40236476 | Msa0162790:intron | 35.0% |
| ! | GTCATTTAGAAGCTAGTTTC+TGG | - | chr1_4:40236609-40236628 | Msa0162790:intron | 35.0% |
| CACTTGAAAACAACATGCAT+CGG | + | chr1_4:40236635-40236654 | None:intergenic | 35.0% | |
| !!! | GTTTTTCTGAAACAACTTCC+CGG | - | chr1_4:40236721-40236740 | Msa0162790:intron | 35.0% |
| ACAAGTTTGAGCTTGATCAA+AGG | - | chr1_4:40236922-40236941 | Msa0162790:intron | 35.0% | |
| AAAGGTTGTATCTTCTGATG+AGG | - | chr1_4:40236940-40236959 | Msa0162790:intron | 35.0% | |
| AAACAAGCTTTCTTCACTCT+TGG | + | chr1_4:40236987-40237006 | None:intergenic | 35.0% | |
| GGTAATCATGAAGTAACTTC+CGG | - | chr1_4:40237094-40237113 | Msa0162790:intron | 35.0% | |
| ! | TGACTATCTAGTTTGTGGAT+TGG | - | chr1_4:40237174-40237193 | Msa0162790:five_prime_UTR | 35.0% |
| ! | AGGGTTGAAATATTGGGTTG+AGG | + | chr1_4:40233026-40233045 | None:intergenic | 40.0% |
| ! | CGATGAAGTGAAGGTATAAG+TGG | + | chr1_4:40233074-40233093 | None:intergenic | 40.0% |
| ACGATTTCTTCTACGACAAG+TGG | + | chr1_4:40233201-40233220 | None:intergenic | 40.0% | |
| !! | GTAGTTTTGCACTGCTTCTA+GGG | - | chr1_4:40233219-40233238 | Msa0162790:CDS | 40.0% |
| !! | CTAAGTTTTGTGAGGCTGTT+TGG | + | chr1_4:40233695-40233714 | None:intergenic | 40.0% |
| !! | GTTTTGGCCAGATGTGAAAA+AGG | - | chr1_4:40233827-40233846 | Msa0162790:intron | 40.0% |
| !! | TATGGCACCTTTTTCACATC+TGG | + | chr1_4:40233837-40233856 | None:intergenic | 40.0% |
| CCAAACAAAAGTCGTTGGAT+TGG | + | chr1_4:40233896-40233915 | None:intergenic | 40.0% | |
| ! | CCAATCCAACGACTTTTGTT+TGG | - | chr1_4:40233893-40233912 | Msa0162790:intron | 40.0% |
| GATCACAATGAGAACTCTTC+AGG | - | chr1_4:40233944-40233963 | Msa0162790:intron | 40.0% | |
| AGAACTCTTCAGGGTATGTT+TGG | - | chr1_4:40233954-40233973 | Msa0162790:intron | 40.0% | |
| !!! | AAGACAGGTTTTGGAGGAAA+AGG | - | chr1_4:40233977-40233996 | Msa0162790:intron | 40.0% |
| !!! | AGACAGGTTTTGGAGGAAAA+GGG | - | chr1_4:40233978-40233997 | Msa0162790:intron | 40.0% |
| AAGAAATGCTGTCTTGGTTG+AGG | - | chr1_4:40234129-40234148 | Msa0162790:intron | 40.0% | |
| AGAAATGCTGTCTTGGTTGA+GGG | - | chr1_4:40234130-40234149 | Msa0162790:intron | 40.0% | |
| TGTTCATGAGCTAGTTGGTT+CGG | - | chr1_4:40234299-40234318 | Msa0162790:intron | 40.0% | |
| !! | ATTGGTTTGGGTATTGGGTT+TGG | - | chr1_4:40234374-40234393 | Msa0162790:intron | 40.0% |
| !! | AATTTACCAAGGGTGTTCAC+AGG | + | chr1_4:40234420-40234439 | None:intergenic | 40.0% |
| TCCTCATGTAGAGAAGAGAA+GGG | - | chr1_4:40234472-40234491 | Msa0162790:CDS | 40.0% | |
| TGTGATCAGTATGTAGAGGT+TGG | + | chr1_4:40234509-40234528 | None:intergenic | 40.0% | |
| TGCTTGTGATCAGTATGTAG+AGG | + | chr1_4:40234513-40234532 | None:intergenic | 40.0% | |
| TTTCAGAACCGAAGTTACTG+AGG | + | chr1_4:40234540-40234559 | None:intergenic | 40.0% | |
| GGATTATAGTAGCCAGTATC+TGG | + | chr1_4:40235010-40235029 | None:intergenic | 40.0% | |
| ! | TTTGGAACAATGTCAAAGGG+AGG | - | chr1_4:40235390-40235409 | Msa0162790:intron | 40.0% |
| TTGGAACAATGTCAAAGGGA+GGG | - | chr1_4:40235391-40235410 | Msa0162790:intron | 40.0% | |
| AATTGCTACTACTGCACAGA+TGG | - | chr1_4:40235529-40235548 | Msa0162790:intron | 40.0% | |
| !! | ATAGTGTGTGTTTGGTTCTG+CGG | - | chr1_4:40235786-40235805 | Msa0162790:intron | 40.0% |
| ! | GTTGGAGAAGATAAGAGTAC+TGG | + | chr1_4:40236275-40236294 | None:intergenic | 40.0% |
| TAATTTCCCAATCGTGGCAA+CGG | + | chr1_4:40236342-40236361 | None:intergenic | 40.0% | |
| TGGTCATAATTTCCCAATCG+TGG | + | chr1_4:40236348-40236367 | None:intergenic | 40.0% | |
| CGATTGGGAAATTATGACCA+TGG | - | chr1_4:40236348-40236367 | Msa0162790:intron | 40.0% | |
| CGTGGGTCAAAATGATGTTT+GGG | + | chr1_4:40236511-40236530 | None:intergenic | 40.0% | |
| TCGTGGGTCAAAATGATGTT+TGG | + | chr1_4:40236512-40236531 | None:intergenic | 40.0% | |
| !!! | CGATGCATGTTGTTTTCAAG+TGG | - | chr1_4:40236633-40236652 | Msa0162790:intron | 40.0% |
| GATCGCTTTCAACTCTAACT+GGG | + | chr1_4:40236769-40236788 | None:intergenic | 40.0% | |
| AGATCGCTTTCAACTCTAAC+TGG | + | chr1_4:40236770-40236789 | None:intergenic | 40.0% | |
| ATTCCTGTGATATCAGACCA+AGG | - | chr1_4:40237142-40237161 | Msa0162790:intron | 40.0% | |
| AATCCTTGGTCTGATATCAC+AGG | + | chr1_4:40237148-40237167 | None:intergenic | 40.0% | |
| ! | CAGCATGACTATCTAGTTTG+TGG | - | chr1_4:40237169-40237188 | Msa0162790:five_prime_UTR | 40.0% |
| GAGAAGATAAGGAACGGTGA+CGG | + | chr1_4:40232985-40233004 | None:intergenic | 45.0% | |
| TCACCGTTCCTTATCTTCTC+TGG | - | chr1_4:40232985-40233004 | Msa0162790:three_prime_UTR | 45.0% | |
| CACCGTTCCTTATCTTCTCT+GGG | - | chr1_4:40232986-40233005 | Msa0162790:three_prime_UTR | 45.0% | |
| CACCCAGAGAAGATAAGGAA+CGG | + | chr1_4:40232991-40233010 | None:intergenic | 45.0% | |
| TGACTCACCCAGAGAAGATA+AGG | + | chr1_4:40232996-40233015 | None:intergenic | 45.0% | |
| TGAAGTGCGTAGAGGGAAAA+GGG | + | chr1_4:40233045-40233064 | None:intergenic | 45.0% | |
| ATGAAGTGCGTAGAGGGAAA+AGG | + | chr1_4:40233046-40233065 | None:intergenic | 45.0% | |
| GGGTAAATGAAGTGCGTAGA+GGG | + | chr1_4:40233052-40233071 | None:intergenic | 45.0% | |
| GAAGCGAATCGATGAAGTGA+AGG | + | chr1_4:40233083-40233102 | None:intergenic | 45.0% | |
| !! | CGTAGTTTTGCACTGCTTCT+AGG | - | chr1_4:40233218-40233237 | Msa0162790:CDS | 45.0% |
| !! | GCTGTTTTCACAAGCTGTCT+TGG | - | chr1_4:40233602-40233621 | Msa0162790:intron | 45.0% |
| AGTATCCAAATGTGAGGCAG+TGG | + | chr1_4:40233744-40233763 | None:intergenic | 45.0% | |
| AGAAACGTGAATTTGTGCCG+TGG | - | chr1_4:40233805-40233824 | Msa0162790:intron | 45.0% | |
| ! | GTGAATTTGTGCCGTGGTTT+TGG | - | chr1_4:40233811-40233830 | Msa0162790:intron | 45.0% |
| TTCACATCTGGCCAAAACCA+CGG | + | chr1_4:40233825-40233844 | None:intergenic | 45.0% | |
| TCAATACCTCACGCTTCTGT+TGG | - | chr1_4:40233922-40233941 | Msa0162790:intron | 45.0% | |
| TCAGGGTATGTTTGGAAGAC+AGG | - | chr1_4:40233962-40233981 | Msa0162790:intron | 45.0% | |
| !! | GTTTGGAAGACAGGTTTTGG+AGG | - | chr1_4:40233971-40233990 | Msa0162790:intron | 45.0% |
| !! | GTTTGGAAGTTGGGTTTTGG+AGG | + | chr1_4:40234093-40234112 | None:intergenic | 45.0% |
| GAACCAACTAGCTCATGAAC+AGG | + | chr1_4:40234300-40234319 | None:intergenic | 45.0% | |
| CTCCTCATGTAGAGAAGAGA+AGG | - | chr1_4:40234471-40234490 | Msa0162790:CDS | 45.0% | |
| ACCCTTCTCTTCTCTACATG+AGG | + | chr1_4:40234476-40234495 | None:intergenic | 45.0% | |
| AGTGAGCTGAACTGCTACAA+TGG | - | chr1_4:40234675-40234694 | Msa0162790:intron | 45.0% | |
| GTTCCAACACTCAATCCTGA+TGG | - | chr1_4:40234980-40234999 | Msa0162790:intron | 45.0% | |
| TACAGATAGGCTCAAACACC+TGG | + | chr1_4:40235434-40235453 | None:intergenic | 45.0% | |
| ! | CAATTGATTGCCGATTACCC+TGG | + | chr1_4:40235629-40235648 | None:intergenic | 45.0% |
| TACAGAGTAACAGAGGGTTC+AGG | - | chr1_4:40235684-40235703 | Msa0162790:intron | 45.0% | |
| TTTGAGTAGACGCAGAAGCT+AGG | - | chr1_4:40236427-40236446 | Msa0162790:intron | 45.0% | |
| ! | CTAGGAAAACTGGCTTCAAC+TGG | - | chr1_4:40236445-40236464 | Msa0162790:intron | 45.0% |
| TGTAGAACGCAGAACCAAAC+AGG | - | chr1_4:40236567-40236586 | Msa0162790:intron | 45.0% | |
| GTAGAACGCAGAACCAAACA+GGG | - | chr1_4:40236568-40236587 | Msa0162790:intron | 45.0% | |
| TAGAACGCAGAACCAAACAG+GGG | - | chr1_4:40236569-40236588 | Msa0162790:intron | 45.0% | |
| AACAAGACTATGCCCCTGTT+TGG | + | chr1_4:40236584-40236603 | None:intergenic | 45.0% | |
| !! | AGGGGCATAGTCTTGTTGAT+TGG | - | chr1_4:40236587-40236606 | Msa0162790:intron | 45.0% |
| GATAGTCATGCTGCAATCCT+TGG | + | chr1_4:40237162-40237181 | None:intergenic | 45.0% | |
| !!! | TTTGTAATTTTTTTTTTAAT+TGG | - | chr1_4:40233276-40233295 | Msa0162790:CDS | 5.0% |
| !! | TATAGTAATTAAAAATTAAT+CGG | - | chr1_4:40236062-40236081 | Msa0162790:intron | 5.0% |
| !! | GATAAGGAACGGTGACGGAT+AGG | + | chr1_4:40232980-40232999 | None:intergenic | 50.0% |
| GGGGTAAATGAAGTGCGTAG+AGG | + | chr1_4:40233053-40233072 | None:intergenic | 50.0% | |
| ! | TGTGATCCAACAGAAGCGTG+AGG | + | chr1_4:40233931-40233950 | None:intergenic | 50.0% |
| CAACTAGCTCATGAACAGGC+TGG | + | chr1_4:40234296-40234315 | None:intergenic | 50.0% | |
| CAGCCTGTTCATGAGCTAGT+TGG | - | chr1_4:40234294-40234313 | Msa0162790:intron | 50.0% | |
| !! | ACCAAGGGTGTTCACAGGTT+GGG | + | chr1_4:40234415-40234434 | None:intergenic | 50.0% |
| !! | TACCAAGGGTGTTCACAGGT+TGG | + | chr1_4:40234416-40234435 | None:intergenic | 50.0% |
| AGCACGCACCTCAGTAACTT+CGG | - | chr1_4:40234529-40234548 | Msa0162790:intron | 50.0% | |
| GAGCTGAACTGCTACAATGG+TGG | - | chr1_4:40234678-40234697 | Msa0162790:intron | 50.0% | |
| GTGCCATCAGGATTGAGTGT+TGG | + | chr1_4:40234986-40235005 | None:intergenic | 50.0% | |
| AACGCGTTCGCATGGAACTA+GGG | + | chr1_4:40235370-40235389 | None:intergenic | 50.0% | |
| AAACGCGTTCGCATGGAACT+AGG | + | chr1_4:40235371-40235390 | None:intergenic | 50.0% | |
| ! | GTTCCATGCGAACGCGTTTT+TGG | - | chr1_4:40235372-40235391 | Msa0162790:intron | 50.0% |
| GTTCCAAAAACGCGTTCGCA+TGG | + | chr1_4:40235378-40235397 | None:intergenic | 50.0% | |
| AGAGTAACAGAGGGTTCAGG+AGG | - | chr1_4:40235687-40235706 | Msa0162790:intron | 50.0% | |
| GAGTAACAGAGGGTTCAGGA+GGG | - | chr1_4:40235688-40235707 | Msa0162790:intron | 50.0% | |
| GACGCAGAAGCTAGGAAAAC+TGG | - | chr1_4:40236435-40236454 | Msa0162790:intron | 50.0% | |
| ! | TGGGCTTCTGATGATGCTGA+AGG | - | chr1_4:40236881-40236900 | Msa0162790:intron | 50.0% |
| ! | GGGCTTCTGATGATGCTGAA+GGG | - | chr1_4:40236882-40236901 | Msa0162790:intron | 50.0% |
| TCAGTGAGGGGTTGGAGGAA+GGG | + | chr1_4:40232943-40232962 | None:intergenic | 55.0% | |
| ATCAGTGAGGGGTTGGAGGA+AGG | + | chr1_4:40232944-40232963 | None:intergenic | 55.0% | |
| !! | TCCAACCCCTCACTGATTCC+CGG | - | chr1_4:40232947-40232966 | Msa0162790:three_prime_UTR | 55.0% |
| TGCTGCCACTGCCTCACATT+TGG | - | chr1_4:40233736-40233755 | Msa0162790:intron | 55.0% | |
| GCTCATGAACAGGCTGGACA+GGG | + | chr1_4:40234290-40234309 | None:intergenic | 55.0% | |
| AGCTCATGAACAGGCTGGAC+AGG | + | chr1_4:40234291-40234310 | None:intergenic | 55.0% | |
| ! | GGGTGTTCACAGGTTGGGTT+GGG | + | chr1_4:40234410-40234429 | None:intergenic | 55.0% |
| ! | AGGGTGTTCACAGGTTGGGT+TGG | + | chr1_4:40234411-40234430 | None:intergenic | 55.0% |
| ACCCAACCTGTGAACACCCT+TGG | - | chr1_4:40234411-40234430 | Msa0162790:intron | 55.0% | |
| CGCATGGAACTAGGGACTGA+GGG | + | chr1_4:40235362-40235381 | None:intergenic | 55.0% | |
| TCGCATGGAACTAGGGACTG+AGG | + | chr1_4:40235363-40235382 | None:intergenic | 55.0% | |
| !! | GTGTGTGTTTGGTTCTGCGG+TGG | - | chr1_4:40235789-40235808 | Msa0162790:intron | 55.0% |
| AAACGGCCGTTGCCACGATT+GGG | - | chr1_4:40236333-40236352 | Msa0162790:intron | 55.0% | |
| GTGGTCAAACGCGGTTTCGT+GGG | + | chr1_4:40236528-40236547 | None:intergenic | 55.0% | |
| CACGTTTGCGTGGTCAAACG+CGG | + | chr1_4:40236537-40236556 | None:intergenic | 55.0% | |
| ACCACGCAAACGTGCGTTTG+AGG | - | chr1_4:40236543-40236562 | Msa0162790:intron | 55.0% | |
| GGGAATCAGTGAGGGGTTGG+AGG | + | chr1_4:40232948-40232967 | None:intergenic | 60.0% | |
| ! | CCAGTATCTGGGGTGCCATC+AGG | + | chr1_4:40234998-40235017 | None:intergenic | 60.0% |
| CCTGATGGCACCCCAGATAC+TGG | - | chr1_4:40234995-40235014 | Msa0162790:intron | 60.0% | |
| GAAACGGCCGTTGCCACGAT+TGG | - | chr1_4:40236332-40236351 | Msa0162790:intron | 60.0% | |
| CGTGGTCAAACGCGGTTTCG+TGG | + | chr1_4:40236529-40236548 | None:intergenic | 60.0% | |
| GCCTCAAACGCACGTTTGCG+TGG | + | chr1_4:40236547-40236566 | None:intergenic | 60.0% | |
| GCCGGGAATCAGTGAGGGGT+TGG | + | chr1_4:40232951-40232970 | None:intergenic | 65.0% | |
| CTGCGCCGGGAATCAGTGAG+GGG | + | chr1_4:40232955-40232974 | None:intergenic | 65.0% | |
| GCTGCGCCGGGAATCAGTGA+GGG | + | chr1_4:40232956-40232975 | None:intergenic | 65.0% | |
| AGCTGCGCCGGGAATCAGTG+AGG | + | chr1_4:40232957-40232976 | None:intergenic | 65.0% | |
| ! | TGACGGATAGGAGCTGCGCC+GGG | + | chr1_4:40232968-40232987 | None:intergenic | 65.0% |
| !! | GTGACGGATAGGAGCTGCGC+CGG | + | chr1_4:40232969-40232988 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 40232881 | 40237295 | 40232881 | ID=Msa0162790;Name=Msa0162790 |
| chr1_4 | mRNA | 40232881 | 40237295 | 40232881 | ID=Msa0162790-mRNA-1;Parent=Msa0162790;Name=Msa0162790-mRNA-1;_AED=0.05;_eAED=0.05;_QI=144|1|1|1|0.75|0.6|5|324|145 |
| chr1_4 | exon | 40232881 | 40233316 | 40232881 | ID=Msa0162790-mRNA-1:exon:11665;Parent=Msa0162790-mRNA-1 |
| chr1_4 | exon | 40234455 | 40234546 | 40234455 | ID=Msa0162790-mRNA-1:exon:11664;Parent=Msa0162790-mRNA-1 |
| chr1_4 | exon | 40235146 | 40235303 | 40235146 | ID=Msa0162790-mRNA-1:exon:11663;Parent=Msa0162790-mRNA-1 |
| chr1_4 | exon | 40235407 | 40235499 | 40235407 | ID=Msa0162790-mRNA-1:exon:11662;Parent=Msa0162790-mRNA-1 |
| chr1_4 | exon | 40237169 | 40237295 | 40237169 | ID=Msa0162790-mRNA-1:exon:11661;Parent=Msa0162790-mRNA-1 |
| chr1_4 | five_prime_UTR | 40237169 | 40237295 | 40237169 | ID=Msa0162790-mRNA-1:five_prime_utr;Parent=Msa0162790-mRNA-1 |
| chr1_4 | five_prime_UTR | 40235483 | 40235499 | 40235483 | ID=Msa0162790-mRNA-1:five_prime_utr;Parent=Msa0162790-mRNA-1 |
| chr1_4 | CDS | 40235407 | 40235482 | 40235407 | ID=Msa0162790-mRNA-1:cds;Parent=Msa0162790-mRNA-1 |
| chr1_4 | CDS | 40235146 | 40235303 | 40235146 | ID=Msa0162790-mRNA-1:cds;Parent=Msa0162790-mRNA-1 |
| chr1_4 | CDS | 40234455 | 40234546 | 40234455 | ID=Msa0162790-mRNA-1:cds;Parent=Msa0162790-mRNA-1 |
| chr1_4 | CDS | 40233205 | 40233316 | 40233205 | ID=Msa0162790-mRNA-1:cds;Parent=Msa0162790-mRNA-1 |
| chr1_4 | three_prime_UTR | 40232881 | 40233204 | 40232881 | ID=Msa0162790-mRNA-1:three_prime_utr;Parent=Msa0162790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
