Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317270 | XP_003594249.1 | 98.913 | 460 | 3 | 1 | 1 | 458 | 1 | 460 | 0.0 | 914 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317270 | sp|O22193|PUB4_ARATH | 51.761 | 284 | 136 | 1 | 168 | 451 | 538 | 820 | 2.41e-82 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0317270 | 0.803419 | 3.517859e-49 | -8.615850e-47 |
| Msa0003300 | Msa0317270 | 0.835870 | 1.304403e-56 | -8.615850e-47 |
| Msa0005000 | Msa0317270 | -0.818332 | 2.071403e-52 | -8.615850e-47 |
| Msa0008290 | Msa0317270 | 0.831670 | 1.463367e-55 | -8.615850e-47 |
| Msa0011930 | Msa0317270 | 0.823663 | 1.226875e-53 | -8.615850e-47 |
| Msa0014570 | Msa0317270 | 0.831245 | 1.861697e-55 | -8.615850e-47 |
| Msa0022750 | Msa0317270 | -0.849630 | 2.859104e-60 | -8.615850e-47 |
| Msa0029850 | Msa0317270 | 0.808172 | 3.528881e-50 | -8.615850e-47 |
| Msa0032320 | Msa0317270 | 0.851233 | 1.014174e-60 | -8.615850e-47 |
| Msa0039250 | Msa0317270 | 0.809857 | 1.537622e-50 | -8.615850e-47 |
| Msa0039570 | Msa0317270 | 0.811677 | 6.212291e-51 | -8.615850e-47 |
| Msa0045550 | Msa0317270 | 0.801807 | 7.564697e-49 | -8.615850e-47 |
| Msa0050930 | Msa0317270 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
| Msa0053050 | Msa0317270 | -0.810275 | 1.249641e-50 | -8.615850e-47 |
| Msa0055070 | Msa0317270 | 0.850491 | 1.640708e-60 | -8.615850e-47 |
| Msa0056450 | Msa0317270 | 0.809507 | 1.828596e-50 | -8.615850e-47 |
| Msa0057300 | Msa0317270 | 0.806015 | 1.009647e-49 | -8.615850e-47 |
| Msa0077450 | Msa0317270 | 0.838766 | 2.366718e-57 | -8.615850e-47 |
| Msa0094600 | Msa0317270 | -0.811251 | 7.684958e-51 | -8.615850e-47 |
| Msa0098390 | Msa0317270 | -0.814973 | 1.172612e-51 | -8.615850e-47 |
| Msa0101020 | Msa0317270 | 0.844656 | 6.604420e-59 | -8.615850e-47 |
| Msa0101880 | Msa0317270 | 0.803676 | 3.111709e-49 | -8.615850e-47 |
| Msa0108390 | Msa0317270 | 0.845672 | 3.508331e-59 | -8.615850e-47 |
| Msa0116790 | Msa0317270 | 0.821336 | 4.262536e-53 | -8.615850e-47 |
| Msa0119320 | Msa0317270 | 0.853946 | 1.707202e-61 | -8.615850e-47 |
| Msa0125050 | Msa0317270 | 0.800318 | 1.524707e-48 | -8.615850e-47 |
| Msa0133720 | Msa0317270 | 0.816501 | 5.353259e-52 | -8.615850e-47 |
| Msa0133820 | Msa0317270 | 0.813099 | 3.037742e-51 | -8.615850e-47 |
| Msa0134000 | Msa0317270 | 0.856793 | 2.529177e-62 | -8.615850e-47 |
| Msa0142460 | Msa0317270 | 0.860143 | 2.536053e-63 | -8.615850e-47 |
| Msa0144790 | Msa0317270 | 0.803702 | 3.072627e-49 | -8.615850e-47 |
| Msa0145110 | Msa0317270 | 0.838332 | 3.061908e-57 | -8.615850e-47 |
| Msa0154440 | Msa0317270 | 0.829399 | 5.261099e-55 | -8.615850e-47 |
| Msa0162790 | Msa0317270 | -0.811027 | 8.594983e-51 | -8.615850e-47 |
| Msa0169820 | Msa0317270 | 0.815884 | 7.354878e-52 | -8.615850e-47 |
| Msa0170140 | Msa0317270 | 0.818330 | 2.074125e-52 | -8.615850e-47 |
| Msa0178510 | Msa0317270 | 0.803916 | 2.773781e-49 | -8.615850e-47 |
| Msa0181000 | Msa0317270 | 0.869659 | 2.623822e-66 | -8.615850e-47 |
| Msa0181230 | Msa0317270 | 0.806156 | 9.431674e-50 | -8.615850e-47 |
| Msa0183010 | Msa0317270 | -0.807330 | 5.329498e-50 | -8.615850e-47 |
| Msa0187030 | Msa0317270 | 0.843685 | 1.203585e-58 | -8.615850e-47 |
| Msa0191890 | Msa0317270 | 0.819328 | 1.230172e-52 | -8.615850e-47 |
| Msa0193540 | Msa0317270 | 0.817177 | 3.774669e-52 | -8.615850e-47 |
| Msa0196340 | Msa0317270 | 0.827391 | 1.605369e-54 | -8.615850e-47 |
| Msa0200560 | Msa0317270 | 0.801059 | 1.076611e-48 | -8.615850e-47 |
| Msa0207350 | Msa0317270 | 0.816901 | 4.354097e-52 | -8.615850e-47 |
| Msa0225640 | Msa0317270 | 0.806298 | 8.803865e-50 | -8.615850e-47 |
| Msa0227230 | Msa0317270 | 0.813045 | 3.122198e-51 | -8.615850e-47 |
| Msa0230370 | Msa0317270 | 0.856998 | 2.200932e-62 | -8.615850e-47 |
| Msa0235470 | Msa0317270 | 0.800755 | 1.241960e-48 | -8.615850e-47 |
| Msa0236700 | Msa0317270 | -0.815444 | 9.215152e-52 | -8.615850e-47 |
| Msa0238230 | Msa0317270 | 0.835379 | 1.736429e-56 | -8.615850e-47 |
| Msa0251050 | Msa0317270 | 0.817850 | 2.662805e-52 | -8.615850e-47 |
| Msa0261160 | Msa0317270 | 0.801589 | 8.386388e-49 | -8.615850e-47 |
| Msa0274630 | Msa0317270 | 0.815959 | 7.074788e-52 | -8.615850e-47 |
| Msa0277420 | Msa0317270 | 0.964554 | 1.791875e-123 | -8.615850e-47 |
| Msa0279260 | Msa0317270 | 0.805364 | 1.383735e-49 | -8.615850e-47 |
| Msa0312530 | Msa0317270 | 0.846151 | 2.601026e-59 | -8.615850e-47 |
| Msa0314060 | Msa0317270 | 0.807206 | 5.660314e-50 | -8.615850e-47 |
| Msa0317270 | Msa0341230 | 0.804716 | 1.889991e-49 | -8.615850e-47 |
| Msa0317270 | Msa0343420 | 0.815902 | 7.288058e-52 | -8.615850e-47 |
| Msa0317270 | Msa0379710 | 0.827055 | 1.932249e-54 | -8.615850e-47 |
| Msa0317270 | Msa0390960 | 0.809660 | 1.695829e-50 | -8.615850e-47 |
| Msa0317270 | Msa0394260 | 0.805096 | 1.574315e-49 | -8.615850e-47 |
| Msa0317270 | Msa0403660 | 0.843455 | 1.387012e-58 | -8.615850e-47 |
| Msa0317270 | Msa0429090 | 0.846198 | 2.525567e-59 | -8.615850e-47 |
| Msa0317270 | Msa0432160 | 0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0317270 | Msa0432670 | 0.807413 | 5.117485e-50 | -8.615850e-47 |
| Msa0317270 | Msa0436370 | 0.840686 | 7.486878e-58 | -8.615850e-47 |
| Msa0317270 | Msa0475500 | 0.843793 | 1.125880e-58 | -8.615850e-47 |
| Msa0317270 | Msa0506790 | 0.808557 | 2.921196e-50 | -8.615850e-47 |
| Msa0317270 | Msa0506800 | 0.813216 | 2.863207e-51 | -8.615850e-47 |
| Msa0317270 | Msa0526940 | 0.840035 | 1.107720e-57 | -8.615850e-47 |
| Msa0317270 | Msa0556010 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
| Msa0317270 | Msa0559500 | 0.802890 | 4.526908e-49 | -8.615850e-47 |
| Msa0317270 | Msa0572420 | 0.818131 | 2.300755e-52 | -8.615850e-47 |
| Msa0317270 | Msa0572480 | 0.821540 | 3.824409e-53 | -8.615850e-47 |
| Msa0317270 | Msa0573040 | 0.803962 | 2.714061e-49 | -8.615850e-47 |
| Msa0317270 | Msa0576890 | 0.829781 | 4.248078e-55 | -8.615850e-47 |
| Msa0317270 | Msa0577200 | -0.807122 | 5.898079e-50 | -8.615850e-47 |
| Msa0317270 | Msa0579660 | 0.816232 | 6.148195e-52 | -8.615850e-47 |
| Msa0317270 | Msa0580180 | 0.816544 | 5.236623e-52 | -8.615850e-47 |
| Msa0317270 | Msa0581690 | 0.802119 | 6.525399e-49 | -8.615850e-47 |
| Msa0317270 | Msa0588220 | 0.848923 | 4.498117e-60 | -8.615850e-47 |
| Msa0317270 | Msa0613710 | 0.801099 | 1.056376e-48 | -8.615850e-47 |
| Msa0317270 | Msa0616550 | 0.810903 | 9.145500e-51 | -8.615850e-47 |
| Msa0317270 | Msa0638350 | 0.802481 | 5.497757e-49 | -8.615850e-47 |
| Msa0317270 | Msa0638360 | 0.819160 | 1.344003e-52 | -8.615850e-47 |
| Msa0317270 | Msa0648520 | 0.812689 | 3.737121e-51 | -8.615850e-47 |
| Msa0317270 | Msa0654930 | -0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa0317270 | Msa0689760 | 0.840544 | 8.157659e-58 | -8.615850e-47 |
| Msa0317270 | Msa0691050 | 0.825967 | 3.511416e-54 | -8.615850e-47 |
| Msa0317270 | Msa0716410 | 0.807777 | 4.283367e-50 | -8.615850e-47 |
| Msa0317270 | Msa0716860 | 0.839148 | 1.883781e-57 | -8.615850e-47 |
| Msa0317270 | Msa0727260 | 0.801401 | 9.160413e-49 | -8.615850e-47 |
| Msa0317270 | Msa0740720 | 0.840758 | 7.169512e-58 | -8.615850e-47 |
| Msa0317270 | Msa0747650 | 0.822884 | 1.865564e-53 | -8.615850e-47 |
| Msa0317270 | Msa0747720 | -0.829364 | 5.365878e-55 | -8.615850e-47 |
| Msa0317270 | Msa0750250 | 0.843721 | 1.177133e-58 | -8.615850e-47 |
| Msa0317270 | Msa0751260 | 0.826574 | 2.518090e-54 | -8.615850e-47 |
| Msa0317270 | Msa0757800 | 0.830237 | 3.289232e-55 | -8.615850e-47 |
| Msa0317270 | Msa0795070 | 0.830687 | 2.551637e-55 | -8.615850e-47 |
| Msa0317270 | Msa0820890 | 0.803547 | 3.309877e-49 | -8.615850e-47 |
| Msa0317270 | Msa0837410 | 0.813410 | 2.595845e-51 | -8.615850e-47 |
| Msa0317270 | Msa0861450 | 0.843349 | 1.480212e-58 | -8.615850e-47 |
| Msa0317270 | Msa0870650 | 0.800420 | 1.453148e-48 | -8.615850e-47 |
| Msa0317270 | Msa0981310 | 0.809890 | 1.512923e-50 | -8.615850e-47 |
| Msa0317270 | Msa0982240 | 0.806529 | 7.872018e-50 | -8.615850e-47 |
| Msa0317270 | Msa1008750 | 0.833480 | 5.206945e-56 | -8.615850e-47 |
| Msa0317270 | Msa1009390 | 0.808892 | 2.476988e-50 | -8.615850e-47 |
| Msa0317270 | Msa1021510 | 0.819354 | 1.214021e-52 | -8.615850e-47 |
| Msa0317270 | Msa1040520 | 0.842121 | 3.137239e-58 | -8.615850e-47 |
| Msa0317270 | Msa1050700 | 0.823599 | 1.270380e-53 | -8.615850e-47 |
| Msa0317270 | Msa1070840 | 0.816661 | 4.929540e-52 | -8.615850e-47 |
| Msa0317270 | Msa1096060 | 0.807972 | 3.892885e-50 | -8.615850e-47 |
| Msa0317270 | Msa1098270 | 0.845889 | 3.064658e-59 | -8.615850e-47 |
| Msa0317270 | Msa1098290 | 0.821207 | 4.563469e-53 | -8.615850e-47 |
| Msa0317270 | Msa1105500 | 0.820532 | 6.525187e-53 | -8.615850e-47 |
| Msa0317270 | Msa1118610 | 0.825632 | 4.216835e-54 | -8.615850e-47 |
| Msa0317270 | Msa1118760 | 0.844462 | 7.447974e-59 | -8.615850e-47 |
| Msa0317270 | Msa1127770 | 0.862601 | 4.515333e-64 | -8.615850e-47 |
| Msa0317270 | Msa1133220 | 0.843172 | 1.649492e-58 | -8.615850e-47 |
| Msa0317270 | Msa1133570 | 0.800483 | 1.411016e-48 | -8.615850e-47 |
| Msa0317270 | Msa1138320 | 0.824287 | 8.759850e-54 | -8.615850e-47 |
| Msa0317270 | Msa1152950 | 0.814558 | 1.449595e-51 | -8.615850e-47 |
| Msa0317270 | Msa1158660 | 0.835402 | 1.713950e-56 | -8.615850e-47 |
| Msa0317270 | Msa1168550 | 0.861671 | 8.706889e-64 | -8.615850e-47 |
| Msa0317270 | Msa1168590 | 0.875339 | 3.331364e-68 | -8.615850e-47 |
| Msa0317270 | Msa1169720 | 0.823349 | 1.453390e-53 | -8.615850e-47 |
| Msa0317270 | Msa1177780 | 0.842476 | 2.526607e-58 | -8.615850e-47 |
| Msa0317270 | Msa1204100 | -0.833210 | 6.078075e-56 | -8.615850e-47 |
| Msa0317270 | Msa1214320 | 0.800589 | 1.342667e-48 | -8.615850e-47 |
| Msa0317270 | Msa1262960 | 0.812540 | 4.027407e-51 | -8.615850e-47 |
| Msa0317270 | Msa1264420 | 0.808138 | 3.588231e-50 | -8.615850e-47 |
| Msa0317270 | Msa1302060 | 0.841793 | 3.829443e-58 | -8.615850e-47 |
| Msa0317270 | Msa1307550 | 0.801086 | 1.062784e-48 | -8.615850e-47 |
| Msa0317270 | Msa1319820 | 0.848199 | 7.136108e-60 | -8.615850e-47 |
| Msa0317270 | Msa1323690 | 0.804277 | 2.334051e-49 | -8.615850e-47 |
| Msa0317270 | Msa1329050 | -0.831196 | 1.914178e-55 | -8.615850e-47 |
| Msa0317270 | Msa1338830 | 0.801333 | 9.459870e-49 | -8.615850e-47 |
| Msa0317270 | Msa1349450 | 0.800132 | 1.663523e-48 | -8.615850e-47 |
| Msa0317270 | Msa1359920 | 0.864493 | 1.169168e-64 | -8.615850e-47 |
| Msa0317270 | Msa1366300 | 0.851761 | 7.191160e-61 | -8.615850e-47 |
| Msa0317270 | Msa1379590 | 0.938008 | 1.365252e-98 | -8.615850e-47 |
| Msa0317270 | Msa1379850 | 0.841353 | 5.004495e-58 | -8.615850e-47 |
| Msa0317270 | Msa1396780 | 0.852167 | 5.511871e-61 | -8.615850e-47 |
| Msa0317270 | Msa1399140 | 0.809337 | 1.989105e-50 | -8.615850e-47 |
| Msa0317270 | Msa1400070 | 0.800508 | 1.394437e-48 | -8.615850e-47 |
| Msa0317270 | Msa1401270 | 0.819349 | 1.217234e-52 | -8.615850e-47 |
| Msa0317270 | Msa1410420 | 0.824482 | 7.883514e-54 | -8.615850e-47 |
| Msa0317270 | Msa1418240 | 0.801332 | 9.465488e-49 | -8.615850e-47 |
| Msa0317270 | Msa1418440 | 0.810498 | 1.118798e-50 | -8.615850e-47 |
| Msa0317270 | Msa1420250 | 0.839893 | 1.206687e-57 | -8.615850e-47 |
| Msa0317270 | Msa1422910 | 0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa0317270 | Msa1424640 | 0.938171 | 1.045423e-98 | -8.615850e-47 |
| Msa0317270 | Msa1433220 | 0.854982 | 8.559998e-62 | -8.615850e-47 |
| Msa0317270 | Msa1435400 | 0.819917 | 9.030360e-53 | -8.615850e-47 |
| Msa0317270 | Msa1445220 | 0.802526 | 5.380709e-49 | -8.615850e-47 |
| Msa0317270 | Msa1447150 | 0.820938 | 5.264738e-53 | -8.615850e-47 |
| Msa0317270 | Msa1450060 | 0.801240 | 9.886588e-49 | -8.615850e-47 |
| Msa0317270 | Msa1453360 | 0.822700 | 2.058846e-53 | -8.615850e-47 |
| Msa0317270 | Msa1454530 | 0.828114 | 1.076278e-54 | -8.615850e-47 |
| Msa0317270 | Msa1456230 | 0.808249 | 3.398777e-50 | -8.615850e-47 |
| Msa0317270 | Msa1458340 | 0.820298 | 7.384422e-53 | -8.615850e-47 |
| Msa0317270 | Msa1459050 | 0.855825 | 4.864498e-62 | -8.615850e-47 |
| Msa0317270 | Msa1465570 | 0.804629 | 1.971215e-49 | -8.615850e-47 |
| Msa0317270 | Msa1465750 | 0.840412 | 8.834040e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317270 | MtrunA17_Chr2g0290151 | 98.913 | 460 | 3 | 1 | 1 | 458 | 1 | 460 | 0.0 | 914 |
| Msa0317270 | MtrunA17_Chr1g0152561 | 52.878 | 278 | 131 | 0 | 173 | 450 | 61 | 338 | 1.03e-91 | 281 |
| Msa0317270 | MtrunA17_Chr3g0134761 | 48.693 | 306 | 141 | 3 | 154 | 455 | 44 | 337 | 3.63e-90 | 278 |
| Msa0317270 | MtrunA17_Chr1g0183781 | 52.330 | 279 | 132 | 1 | 177 | 455 | 444 | 721 | 5.03e-82 | 268 |
| Msa0317270 | MtrunA17_Chr3g0106931 | 43.717 | 382 | 183 | 6 | 99 | 451 | 452 | 830 | 1.76e-76 | 255 |
| Msa0317270 | MtrunA17_Chr7g0261371 | 50.000 | 278 | 138 | 1 | 177 | 454 | 518 | 794 | 1.10e-75 | 252 |
| Msa0317270 | MtrunA17_Chr4g0044411 | 44.444 | 279 | 155 | 0 | 173 | 451 | 373 | 651 | 6.18e-68 | 228 |
| Msa0317270 | MtrunA17_Chr4g0031431 | 47.547 | 265 | 139 | 0 | 188 | 452 | 368 | 632 | 8.85e-68 | 228 |
| Msa0317270 | MtrunA17_Chr1g0199321 | 47.518 | 282 | 148 | 0 | 173 | 454 | 345 | 626 | 2.28e-67 | 226 |
| Msa0317270 | MtrunA17_Chr7g0237931 | 44.944 | 267 | 145 | 1 | 180 | 446 | 341 | 605 | 5.49e-61 | 209 |
| Msa0317270 | MtrunA17_Chr7g0248251 | 39.721 | 287 | 173 | 0 | 165 | 451 | 359 | 645 | 1.09e-57 | 201 |
| Msa0317270 | MtrunA17_Chr5g0437411 | 40.532 | 301 | 173 | 5 | 152 | 446 | 383 | 683 | 2.60e-52 | 187 |
| Msa0317270 | MtrunA17_Chr2g0282351 | 75.238 | 105 | 17 | 2 | 1 | 105 | 1 | 96 | 1.99e-42 | 145 |
| Msa0317270 | MtrunA17_Chr2g0284461 | 35.762 | 302 | 182 | 8 | 154 | 447 | 377 | 674 | 2.29e-35 | 139 |
| Msa0317270 | MtrunA17_Chr5g0429231 | 35.959 | 292 | 182 | 4 | 172 | 458 | 33 | 324 | 1.57e-34 | 132 |
| Msa0317270 | MtrunA17_Chr8g0377151 | 34.783 | 276 | 169 | 6 | 188 | 454 | 443 | 716 | 6.71e-30 | 123 |
| Msa0317270 | MtrunA17_Chr3g0118001 | 32.472 | 271 | 178 | 2 | 180 | 447 | 218 | 486 | 1.81e-27 | 115 |
| Msa0317270 | MtrunA17_Chr7g0275081 | 34.783 | 276 | 170 | 6 | 182 | 449 | 180 | 453 | 2.10e-27 | 114 |
| Msa0317270 | MtrunA17_Chr6g0449461 | 33.793 | 290 | 179 | 7 | 177 | 457 | 6 | 291 | 3.52e-26 | 108 |
| Msa0317270 | MtrunA17_Chr4g0059201 | 31.636 | 275 | 181 | 6 | 188 | 455 | 437 | 711 | 2.05e-25 | 109 |
| Msa0317270 | MtrunA17_Chr3g0122721 | 33.086 | 269 | 164 | 8 | 194 | 451 | 448 | 711 | 1.08e-24 | 107 |
| Msa0317270 | MtrunA17_Chr4g0048811 | 33.333 | 204 | 129 | 5 | 247 | 447 | 121 | 320 | 6.25e-24 | 102 |
| Msa0317270 | MtrunA17_Chr7g0234671 | 30.142 | 282 | 184 | 8 | 175 | 447 | 173 | 450 | 1.91e-23 | 102 |
| Msa0317270 | MtrunA17_Chr5g0435041 | 30.800 | 250 | 134 | 5 | 205 | 453 | 92 | 303 | 7.97e-22 | 96.7 |
| Msa0317270 | MtrunA17_Chr2g0280671 | 31.698 | 265 | 165 | 5 | 194 | 451 | 128 | 383 | 7.65e-21 | 94.0 |
| Msa0317270 | MtrunA17_Chr1g0199031 | 38.333 | 120 | 57 | 1 | 247 | 366 | 15 | 117 | 9.06e-20 | 85.1 |
| Msa0317270 | MtrunA17_Chr1g0189811 | 33.333 | 273 | 161 | 8 | 188 | 446 | 171 | 436 | 9.08e-20 | 91.3 |
| Msa0317270 | MtrunA17_Chr6g0451581 | 29.469 | 207 | 144 | 1 | 177 | 383 | 242 | 446 | 1.10e-19 | 91.7 |
| Msa0317270 | MtrunA17_Chr3g0111451 | 32.389 | 247 | 126 | 5 | 205 | 449 | 113 | 320 | 5.35e-19 | 88.6 |
| Msa0317270 | MtrunA17_Chr1g0149941 | 29.412 | 272 | 178 | 7 | 188 | 447 | 189 | 458 | 1.34e-18 | 88.6 |
| Msa0317270 | MtrunA17_Chr3g0137061 | 28.859 | 298 | 198 | 7 | 162 | 447 | 99 | 394 | 1.71e-18 | 87.8 |
| Msa0317270 | MtrunA17_Chr3g0117851 | 28.782 | 271 | 143 | 8 | 188 | 448 | 393 | 623 | 1.62e-17 | 85.5 |
| Msa0317270 | MtrunA17_Chr4g0013091 | 31.900 | 279 | 145 | 10 | 194 | 447 | 439 | 697 | 1.20e-16 | 82.8 |
| Msa0317270 | MtrunA17_Chr5g0413681 | 30.877 | 285 | 189 | 6 | 180 | 456 | 390 | 674 | 6.93e-15 | 77.0 |
| Msa0317270 | MtrunA17_Chr8g0353271 | 27.740 | 292 | 193 | 8 | 172 | 446 | 7 | 297 | 3.16e-13 | 70.9 |
| Msa0317270 | MtrunA17_Chr5g0394261 | 27.698 | 278 | 181 | 10 | 187 | 449 | 118 | 390 | 1.19e-12 | 70.1 |
| Msa0317270 | MtrunA17_Chr5g0394261 | 28.436 | 211 | 145 | 3 | 171 | 379 | 197 | 403 | 3.92e-11 | 65.5 |
| Msa0317270 | MtrunA17_Chr5g0404311 | 28.889 | 180 | 115 | 6 | 281 | 450 | 537 | 713 | 1.56e-12 | 69.7 |
| Msa0317270 | MtrunA17_Chr8g0350681 | 27.530 | 247 | 168 | 7 | 213 | 453 | 238 | 479 | 1.96e-12 | 69.3 |
| Msa0317270 | MtrunA17_Chr8g0373031 | 27.778 | 180 | 121 | 3 | 280 | 452 | 536 | 713 | 5.13e-12 | 68.2 |
| Msa0317270 | MtrunA17_Chr1g0205751 | 26.756 | 299 | 199 | 10 | 171 | 454 | 105 | 398 | 8.48e-12 | 67.4 |
| Msa0317270 | MtrunA17_Chr1g0205751 | 27.778 | 216 | 150 | 3 | 171 | 384 | 200 | 411 | 1.85e-11 | 66.2 |
| Msa0317270 | MtrunA17_Chr7g0259851 | 26.697 | 221 | 154 | 4 | 177 | 394 | 189 | 404 | 1.18e-11 | 67.0 |
| Msa0317270 | MtrunA17_Chr3g0084371 | 30.818 | 159 | 109 | 1 | 188 | 345 | 271 | 429 | 3.73e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317270 | AT4G16490.1 | 71.882 | 473 | 115 | 8 | 1 | 457 | 1 | 471 | 0.0 | 610 |
| Msa0317270 | AT3G01400.1 | 45.013 | 371 | 171 | 2 | 81 | 450 | 4 | 342 | 1.11e-92 | 285 |
| Msa0317270 | AT5G58680.1 | 43.666 | 371 | 175 | 5 | 82 | 450 | 3 | 341 | 2.65e-86 | 268 |
| Msa0317270 | AT2G23140.3 | 49.355 | 310 | 148 | 3 | 150 | 451 | 323 | 631 | 3.38e-85 | 274 |
| Msa0317270 | AT2G23140.5 | 49.355 | 310 | 148 | 3 | 150 | 451 | 323 | 631 | 3.38e-85 | 274 |
| Msa0317270 | AT2G23140.1 | 51.761 | 284 | 136 | 1 | 168 | 451 | 541 | 823 | 2.42e-83 | 273 |
| Msa0317270 | AT2G23140.2 | 51.761 | 284 | 136 | 1 | 168 | 451 | 538 | 820 | 2.45e-83 | 273 |
| Msa0317270 | AT2G23140.4 | 51.761 | 284 | 136 | 1 | 168 | 451 | 538 | 820 | 2.45e-83 | 273 |
| Msa0317270 | AT5G67340.1 | 49.828 | 291 | 144 | 2 | 162 | 451 | 412 | 701 | 1.99e-77 | 255 |
| Msa0317270 | AT5G67340.2 | 49.828 | 291 | 144 | 2 | 162 | 451 | 412 | 701 | 1.99e-77 | 255 |
| Msa0317270 | AT3G54790.2 | 48.929 | 280 | 140 | 3 | 172 | 450 | 438 | 715 | 1.14e-68 | 232 |
| Msa0317270 | AT3G54790.3 | 48.929 | 280 | 140 | 3 | 172 | 450 | 474 | 751 | 2.43e-68 | 232 |
| Msa0317270 | AT3G54790.1 | 48.929 | 280 | 140 | 3 | 172 | 450 | 474 | 751 | 2.43e-68 | 232 |
| Msa0317270 | AT3G46510.1 | 46.691 | 272 | 144 | 1 | 188 | 458 | 369 | 640 | 4.04e-66 | 224 |
| Msa0317270 | AT1G23030.1 | 44.286 | 280 | 155 | 1 | 173 | 451 | 333 | 612 | 7.07e-66 | 223 |
| Msa0317270 | AT1G71020.2 | 44.326 | 282 | 155 | 2 | 173 | 452 | 195 | 476 | 1.55e-64 | 216 |
| Msa0317270 | AT3G54850.1 | 45.196 | 281 | 154 | 0 | 177 | 457 | 351 | 631 | 2.02e-63 | 216 |
| Msa0317270 | AT1G71020.1 | 44.803 | 279 | 152 | 2 | 173 | 449 | 343 | 621 | 2.46e-63 | 216 |
| Msa0317270 | AT2G28830.1 | 43.382 | 272 | 151 | 3 | 188 | 456 | 300 | 571 | 6.72e-60 | 206 |
| Msa0317270 | AT5G42340.1 | 41.694 | 307 | 175 | 2 | 148 | 451 | 354 | 659 | 1.27e-56 | 199 |
| Msa0317270 | AT1G29340.1 | 35.759 | 316 | 181 | 9 | 154 | 456 | 389 | 695 | 5.13e-33 | 132 |
| Msa0317270 | AT3G07360.5 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.3 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.9 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.6 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.2 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.8 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.10 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.7 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.4 | 33.566 | 286 | 178 | 8 | 180 | 456 | 43 | 325 | 1.08e-31 | 124 |
| Msa0317270 | AT3G07360.1 | 34.296 | 277 | 170 | 8 | 182 | 449 | 180 | 453 | 5.86e-31 | 124 |
| Msa0317270 | AT1G67530.2 | 34.432 | 273 | 169 | 6 | 194 | 458 | 447 | 717 | 6.98e-31 | 126 |
| Msa0317270 | AT1G67530.1 | 34.432 | 273 | 169 | 6 | 194 | 458 | 447 | 717 | 6.98e-31 | 126 |
| Msa0317270 | AT1G67530.4 | 34.432 | 273 | 169 | 6 | 194 | 458 | 447 | 717 | 6.98e-31 | 126 |
| Msa0317270 | AT4G12710.1 | 35.424 | 271 | 166 | 6 | 191 | 452 | 65 | 335 | 7.46e-30 | 120 |
| Msa0317270 | AT5G62560.1 | 34.109 | 258 | 163 | 3 | 195 | 447 | 258 | 513 | 1.01e-27 | 116 |
| Msa0317270 | AT1G24330.1 | 32.971 | 276 | 172 | 8 | 185 | 451 | 438 | 709 | 1.59e-27 | 116 |
| Msa0317270 | AT1G24330.2 | 32.971 | 276 | 172 | 8 | 185 | 451 | 438 | 709 | 1.59e-27 | 116 |
| Msa0317270 | AT4G21350.1 | 34.701 | 268 | 169 | 4 | 181 | 446 | 104 | 367 | 1.58e-25 | 107 |
| Msa0317270 | AT3G03440.1 | 32.331 | 266 | 171 | 4 | 191 | 449 | 84 | 347 | 1.55e-24 | 105 |
| Msa0317270 | AT5G65200.1 | 28.322 | 286 | 192 | 3 | 174 | 448 | 227 | 510 | 5.89e-24 | 105 |
| Msa0317270 | AT5G40140.1 | 28.179 | 291 | 202 | 5 | 161 | 447 | 219 | 506 | 1.12e-22 | 101 |
| Msa0317270 | AT5G14510.1 | 34.440 | 241 | 144 | 8 | 218 | 448 | 44 | 280 | 1.51e-22 | 98.6 |
| Msa0317270 | AT1G27910.1 | 30.519 | 308 | 201 | 6 | 159 | 455 | 406 | 711 | 9.83e-22 | 99.0 |
| Msa0317270 | AT5G01830.1 | 30.303 | 330 | 186 | 11 | 128 | 447 | 349 | 644 | 5.07e-19 | 90.5 |
| Msa0317270 | AT3G47820.1 | 31.298 | 262 | 170 | 5 | 194 | 447 | 228 | 487 | 8.98e-19 | 89.4 |
| Msa0317270 | AT1G08315.1 | 26.962 | 293 | 193 | 8 | 172 | 444 | 8 | 299 | 5.41e-18 | 85.1 |
| Msa0317270 | AT4G31890.3 | 27.653 | 311 | 197 | 9 | 161 | 447 | 122 | 428 | 2.98e-17 | 84.7 |
| Msa0317270 | AT4G31890.2 | 27.653 | 311 | 197 | 9 | 161 | 447 | 122 | 428 | 2.98e-17 | 84.7 |
| Msa0317270 | AT4G31890.1 | 27.653 | 311 | 197 | 9 | 161 | 447 | 122 | 428 | 2.98e-17 | 84.7 |
| Msa0317270 | AT2G25130.1 | 28.996 | 269 | 173 | 8 | 193 | 447 | 131 | 395 | 3.99e-17 | 84.0 |
| Msa0317270 | AT5G18320.1 | 29.391 | 279 | 182 | 6 | 182 | 447 | 171 | 447 | 7.07e-17 | 83.2 |
| Msa0317270 | AT1G10560.1 | 29.391 | 279 | 183 | 9 | 191 | 457 | 408 | 684 | 4.66e-16 | 81.3 |
| Msa0317270 | AT1G60190.1 | 28.520 | 277 | 185 | 9 | 191 | 454 | 394 | 670 | 2.89e-15 | 79.0 |
| Msa0317270 | AT2G27430.1 | 28.990 | 307 | 193 | 9 | 159 | 450 | 63 | 359 | 6.57e-13 | 70.9 |
Find 158 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAGAAACTTGTAATATTT+TGG | 0.122061 | 2_4:-14917261 | Msa0317270:three_prime_UTR |
| GCCAAAATATTACAAGTTTC+TGG | 0.142504 | 2_4:+14917260 | None:intergenic |
| CTTTGAGCCTTTGGTTGATT+AGG | 0.218183 | 2_4:-14917727 | Msa0317270:three_prime_UTR |
| AGAGAAGTAATTGCGTATTT+TGG | 0.241782 | 2_4:-14918108 | Msa0317270:three_prime_UTR |
| GGTACAGATGACCCTAGTTT+TGG | 0.260031 | 2_4:-14917689 | Msa0317270:three_prime_UTR |
| TTCCAATTTGTTGTGTTTCC+AGG | 0.266426 | 2_4:-14917893 | Msa0317270:three_prime_UTR |
| TACAGTGTGCTAAACATTCT+TGG | 0.282556 | 2_4:-14918018 | Msa0317270:three_prime_UTR |
| AAAAGCTCAATTGGAGCTTC+AGG | 0.285745 | 2_4:-14919272 | Msa0317270:CDS |
| ATGAAATGAAATGAAATTAA+AGG | 0.299143 | 2_4:+14920347 | None:intergenic |
| TGTGTATATAGCGGCTTTGC+TGG | 0.309929 | 2_4:-14918045 | Msa0317270:three_prime_UTR |
| TTGATTTATGTATTGAAAAC+AGG | 0.316588 | 2_4:-14919359 | Msa0317270:CDS |
| CTGTAACGAATTTGAGATTA+GGG | 0.318885 | 2_4:+14920176 | None:intergenic |
| CATGGTTGTCTTTGAGCCTT+TGG | 0.326356 | 2_4:-14917736 | Msa0317270:three_prime_UTR |
| AATAGATGAATGATATTGAT+AGG | 0.337033 | 2_4:+14920078 | None:intergenic |
| TAATGGAAAACGATTTGAAT+TGG | 0.343954 | 2_4:+14920108 | None:intergenic |
| CGATACACAGGTGGATCTTT+CGG | 0.345517 | 2_4:+14919967 | None:intergenic |
| CCTAGTACTTCACTGCTATC+TGG | 0.346490 | 2_4:-14917598 | Msa0317270:three_prime_UTR |
| CTCCTGGAAACACAACAAAT+TGG | 0.354614 | 2_4:+14917891 | None:intergenic |
| GAAGAGAATAAAAGCTCAAT+TGG | 0.364861 | 2_4:-14919281 | Msa0317270:CDS |
| TTGGTTTCGCTTCTGTTGAA+TGG | 0.365664 | 2_4:-14919236 | Msa0317270:CDS |
| GTTATCTTCATCGAAGATAC+TGG | 0.372226 | 2_4:+14920006 | None:intergenic |
| ACTGTAACGAATTTGAGATT+AGG | 0.373810 | 2_4:+14920175 | None:intergenic |
| GAATGTTTAGAAGTAAAATA+TGG | 0.377983 | 2_4:-14917321 | Msa0317270:three_prime_UTR |
| AACAGATGAAGCTGAGTAAC+TGG | 0.382820 | 2_4:+14917484 | None:intergenic |
| GGAGTTACATGGCGTGTGTT+TGG | 0.383146 | 2_4:-14917872 | Msa0317270:three_prime_UTR |
| GAGTATCAGATATGGTATTC+TGG | 0.386243 | 2_4:+14917375 | None:intergenic |
| AGCTAGTGACACGGTGGATT+CGG | 0.390998 | 2_4:+14917843 | None:intergenic |
| CTTTGCTTGTTCCTTTGCTT+CGG | 0.403894 | 2_4:-14919487 | Msa0317270:CDS |
| TCTGTGTCCATAGCTCCTTT+TGG | 0.406665 | 2_4:-14917569 | Msa0317270:three_prime_UTR |
| AAGACAACCATGCTTGTGTT+TGG | 0.417373 | 2_4:+14917747 | None:intergenic |
| ACCGCGTGCTCTTGCGTCCA+TGG | 0.417759 | 2_4:+14919455 | None:intergenic |
| GGTGAAGCCGTTGGTGGAGC+TGG | 0.424429 | 2_4:-14919123 | Msa0317270:CDS |
| TGGTGAACACTGAAATATAA+AGG | 0.425112 | 2_4:+14917120 | None:intergenic |
| TTTCACAGACCCATCTTCAA+TGG | 0.425894 | 2_4:+14918980 | None:intergenic |
| CTTGTCGCTCTTTCGCAGAA+TGG | 0.428040 | 2_4:-14918864 | Msa0317270:CDS |
| CCGGAGTGTGACGGTGGAGG+TGG | 0.439004 | 2_4:-14919755 | Msa0317270:CDS |
| TCTAGAGAAACCATTGTTGA+AGG | 0.439249 | 2_4:+14920142 | None:intergenic |
| CTTGTGGAAGCCATTGAAGA+TGG | 0.441589 | 2_4:-14918990 | Msa0317270:CDS |
| TTGTGTTTCCAGGAGTTACA+TGG | 0.452715 | 2_4:-14917883 | Msa0317270:three_prime_UTR |
| CCAGATAGCAGTGAAGTACT+AGG | 0.455977 | 2_4:+14917598 | None:intergenic |
| TATCTGATCTTTCAATAGCT+TGG | 0.456089 | 2_4:+14917100 | None:intergenic |
| CTGGTGGCTGAGCAAGGGAA+TGG | 0.460644 | 2_4:-14919104 | Msa0317270:CDS |
| GACGGTGGAGGTGGAGGTGA+TGG | 0.463543 | 2_4:-14919746 | Msa0317270:CDS |
| TCACGAAATATCAGTTTGAA+TGG | 0.464611 | 2_4:-14917350 | Msa0317270:three_prime_UTR |
| TGCATGAATATAGCTAGGTT+TGG | 0.466969 | 2_4:-14917933 | Msa0317270:three_prime_UTR |
| TTCAGGGGCGATTCCACCGT+TGG | 0.467013 | 2_4:-14919255 | Msa0317270:CDS |
| GTGGAGCTGGTGGCTGAGCA+AGG | 0.473173 | 2_4:-14919110 | Msa0317270:CDS |
| TCGTGACAGAGTATCAGATA+TGG | 0.474276 | 2_4:+14917367 | None:intergenic |
| CGAAGGGAAGGAAGCGATTG+TGG | 0.476287 | 2_4:-14919033 | Msa0317270:CDS |
| AACACACGCCATGTAACTCC+TGG | 0.489743 | 2_4:+14917875 | None:intergenic |
| AAAGCTCAATTGGAGCTTCA+GGG | 0.489989 | 2_4:-14919271 | Msa0317270:CDS |
| AAGATCTAGAAGGTCTTGTT+CGG | 0.492431 | 2_4:+14919862 | None:intergenic |
| GATTGCTTGTTAGAGAAGGT+GGG | 0.496800 | 2_4:-14918896 | Msa0317270:CDS |
| AGCTATATTCATGCATCTAA+AGG | 0.498385 | 2_4:+14917941 | None:intergenic |
| AAAGAGAGAGCGGTGAGTGC+TGG | 0.499031 | 2_4:-14919149 | Msa0317270:CDS |
| AAGGAAGCGATTGTGGAAGA+AGG | 0.502557 | 2_4:-14919026 | Msa0317270:CDS |
| GAGTGTGACGGTGGAGGTGG+AGG | 0.503322 | 2_4:-14919752 | Msa0317270:CDS |
| AAGCTTGAGAAAGATCTAGA+AGG | 0.504088 | 2_4:+14919852 | None:intergenic |
| CAAGCTCCAATTTAACCAAA+AGG | 0.504254 | 2_4:+14917554 | None:intergenic |
| TTAGATGCATGAATATAGCT+AGG | 0.505666 | 2_4:-14917938 | Msa0317270:three_prime_UTR |
| TATGTGTTCTTGACAAAAGC+AGG | 0.509013 | 2_4:-14917286 | Msa0317270:three_prime_UTR |
| TGCTTCGGTGTAGTGATCCA+TGG | 0.509667 | 2_4:-14919472 | Msa0317270:CDS |
| TCAAAATCACAGCGAAACAT+AGG | 0.512047 | 2_4:-14920052 | Msa0317270:CDS |
| AATGAAATGAAATTAAAGGC+TGG | 0.513835 | 2_4:+14920351 | None:intergenic |
| GTTGAACCTGAGCCTTGCAT+GGG | 0.513964 | 2_4:-14919710 | Msa0317270:CDS |
| CTTCTTCAGTGGCTGTGAAA+CGG | 0.515156 | 2_4:-14919589 | Msa0317270:CDS |
| ACTGGATCTTCTTGTTCGCA+TGG | 0.518937 | 2_4:+14920024 | None:intergenic |
| GAAACCATTGTTGAAGGTGA+AGG | 0.521147 | 2_4:+14920148 | None:intergenic |
| GGATTGCTTGTTAGAGAAGG+TGG | 0.521997 | 2_4:-14918897 | Msa0317270:CDS |
| GTGGTGTTGAATAGCTTAGC+TGG | 0.523643 | 2_4:-14919062 | Msa0317270:CDS |
| GCTTCCAAGAATCACAAATC+CGG | 0.526706 | 2_4:-14919899 | Msa0317270:CDS |
| TGGTGGCTGAGCAAGGGAAT+GGG | 0.526822 | 2_4:-14919103 | Msa0317270:CDS |
| ACGGTGAAGCTTTGTGTGGA+TGG | 0.533537 | 2_4:-14919620 | Msa0317270:CDS |
| CGCTAACCTCTGAAGCTCAC+CGG | 0.536075 | 2_4:+14919790 | None:intergenic |
| AATTTAACCAAAAGGAGCTA+TGG | 0.536811 | 2_4:+14917562 | None:intergenic |
| TCTGACAATTTCCAGTTGTG+TGG | 0.537237 | 2_4:+14917231 | None:intergenic |
| CTCCGCACTTTCACAACAAG+TGG | 0.537755 | 2_4:+14917628 | None:intergenic |
| CGAAAGATCCACCTGTGTAT+CGG | 0.539755 | 2_4:-14919966 | Msa0317270:CDS |
| GGAACCTTCACCTTCAACAA+TGG | 0.539901 | 2_4:-14920152 | Msa0317270:exon |
| GAAGCGATTGTGGAAGAAGG+TGG | 0.540304 | 2_4:-14919023 | Msa0317270:CDS |
| TGGTTTACAGTCTTCTTCAG+TGG | 0.541588 | 2_4:-14919600 | Msa0317270:CDS |
| AAGAAACTGATATTTAATGC+TGG | 0.543549 | 2_4:-14919395 | Msa0317270:CDS |
| GGTCTGCAGCGGCGAAATTG+AGG | 0.543913 | 2_4:-14919568 | Msa0317270:CDS |
| ATTGAAGATGGGTCTGTGAA+AGG | 0.544960 | 2_4:-14918978 | Msa0317270:CDS |
| GCGAGTCTGTAAATTCAGTC+AGG | 0.546237 | 2_4:-14917143 | Msa0317270:three_prime_UTR |
| GACGCAAGAGCACGCGGTGA+CGG | 0.550538 | 2_4:-14919450 | Msa0317270:CDS |
| TGAGCAAGGGAATGGGATGA+TGG | 0.551467 | 2_4:-14919096 | Msa0317270:CDS |
| TCTATCGTCGACCTCCGTCT+CGG | 0.551730 | 2_4:-14919929 | Msa0317270:CDS |
| GTTAGCGACGCTGCCGTCAC+CGG | 0.552112 | 2_4:-14919774 | Msa0317270:CDS |
| TGTTGAACCTGAGCCTTGCA+TGG | 0.552713 | 2_4:-14919711 | Msa0317270:CDS |
| TCACCGGAGTGTGACGGTGG+AGG | 0.558234 | 2_4:-14919758 | Msa0317270:CDS |
| TGTTGAATGGTTCTAACAGA+GGG | 0.562029 | 2_4:-14919223 | Msa0317270:CDS |
| ACCGTCGGTTGAAGATCCTC+CGG | 0.563481 | 2_4:+14919638 | None:intergenic |
| AACTCCTCGAGCTAAGCATA+AGG | 0.564045 | 2_4:-14918841 | Msa0317270:intron |
| AGGTGGAATCGCGGCGCTTG+TGG | 0.566826 | 2_4:-14919006 | Msa0317270:CDS |
| ATTGATTATTGTGTATATAG+CGG | 0.568579 | 2_4:-14918054 | Msa0317270:three_prime_UTR |
| TGGTGTGGTGAAGCCGTTGG+TGG | 0.571210 | 2_4:-14919129 | Msa0317270:CDS |
| TGCTGGTGTGGTGAAGCCGT+TGG | 0.572004 | 2_4:-14919132 | Msa0317270:CDS |
| ACGGAGGTCGACGATAGAAT+CGG | 0.572944 | 2_4:+14919934 | None:intergenic |
| TTGTGGAAGCCATTGAAGAT+GGG | 0.575508 | 2_4:-14918989 | Msa0317270:CDS |
| ATATCTCCGGTGAGCTTCAG+AGG | 0.576091 | 2_4:-14919796 | Msa0317270:CDS |
| AGAGGATTGCTTGTTAGAGA+AGG | 0.577133 | 2_4:-14918900 | Msa0317270:CDS |
| TGCGAAAGAGCGACAAGAGG+AGG | 0.579038 | 2_4:+14918870 | None:intergenic |
| GCTTGTGTTTGGTCCTGCGT+CGG | 0.580698 | 2_4:+14917758 | None:intergenic |
| GGCTGTGAAACGGTCTGCAG+CGG | 0.585635 | 2_4:-14919579 | Msa0317270:CDS |
| AGCTGGAATTGACGAAGGGA+AGG | 0.585870 | 2_4:-14919045 | Msa0317270:CDS |
| TGATTTATGTATTGAAAACA+GGG | 0.586738 | 2_4:-14919358 | Msa0317270:CDS |
| CCACCGTCACACTCCGGTGA+CGG | 0.588930 | 2_4:+14919761 | None:intergenic |
| CGAAGCAAAGGAACAAGCAA+AGG | 0.589643 | 2_4:+14919488 | None:intergenic |
| GATTATTGAGAGTATTTCGC+CGG | 0.592143 | 2_4:-14919657 | Msa0317270:CDS |
| AGATGGGTCTGTGAAAGGAA+AGG | 0.595034 | 2_4:-14918973 | Msa0317270:CDS |
| TGGAGGTGGAGGTGATGGTG+TGG | 0.595135 | 2_4:-14919741 | Msa0317270:CDS |
| GCTTGTAGTAGTGATATCTC+CGG | 0.597721 | 2_4:-14919809 | Msa0317270:CDS |
| GTGTGCTAAACATTCTTGGA+AGG | 0.599413 | 2_4:-14918014 | Msa0317270:three_prime_UTR |
| GCCGGAGGATCTTCAACCGA+CGG | 0.599927 | 2_4:-14919639 | Msa0317270:CDS |
| CCACCTCCACCGTCACACTC+CGG | 0.602701 | 2_4:+14919755 | None:intergenic |
| AACACAACAAATTGGAACAA+GGG | 0.602875 | 2_4:+14917899 | None:intergenic |
| TGGGATGATGGAGAAAGCAA+TGG | 0.603285 | 2_4:-14919084 | Msa0317270:CDS |
| CACTTTCACAACAAGTGGGA+AGG | 0.605662 | 2_4:+14917633 | None:intergenic |
| TCCCACTTGTTGTGAAAGTG+CGG | 0.608019 | 2_4:-14917630 | Msa0317270:three_prime_UTR |
| AGCTTAGCTGGAATTGACGA+AGG | 0.609188 | 2_4:-14919050 | Msa0317270:CDS |
| CGCAGGACCAAACACAAGCA+TGG | 0.612428 | 2_4:-14917754 | Msa0317270:three_prime_UTR |
| AAGCTCAATTGGAGCTTCAG+GGG | 0.614032 | 2_4:-14919270 | Msa0317270:CDS |
| GCTGAAAGTGTTACAAACAG+AGG | 0.615497 | 2_4:-14918918 | Msa0317270:CDS |
| CTGCCGTCACCGGAGTGTGA+CGG | 0.618794 | 2_4:-14919764 | Msa0317270:CDS |
| TTTACCTTATGCTTAGCTCG+AGG | 0.620491 | 2_4:+14918837 | None:intergenic |
| GAAGCCGTTGGTGGAGCTGG+TGG | 0.620509 | 2_4:-14919120 | Msa0317270:CDS |
| TCATGCTTCAACTACATCCA+CGG | 0.621756 | 2_4:-14917791 | Msa0317270:three_prime_UTR |
| GGATCACTACACCGAAGCAA+AGG | 0.624246 | 2_4:+14919476 | None:intergenic |
| GCAAAGAGAGAATTTCTCGA+CGG | 0.627327 | 2_4:-14919681 | Msa0317270:CDS |
| TATTGAGAGTATTTCGCCGG+AGG | 0.627403 | 2_4:-14919654 | Msa0317270:CDS |
| TGGAGCTGGTGGCTGAGCAA+GGG | 0.629086 | 2_4:-14919109 | Msa0317270:CDS |
| TAATCTCAAATTCGTTACAG+TGG | 0.630869 | 2_4:-14920173 | Msa0317270:five_prime_UTR |
| CTGTTGAATGGTTCTAACAG+AGG | 0.632453 | 2_4:-14919224 | Msa0317270:CDS |
| TGGAAGCGAGTTCTCCGAGA+CGG | 0.633050 | 2_4:+14919915 | None:intergenic |
| CGGTGAATGCTTACCGACGC+AGG | 0.638951 | 2_4:-14917771 | Msa0317270:three_prime_UTR |
| TTGAACCTGAGCCTTGCATG+GGG | 0.643044 | 2_4:-14919709 | Msa0317270:CDS |
| AAACACAACAAATTGGAACA+AGG | 0.643203 | 2_4:+14917898 | None:intergenic |
| TCAGCCACCAGCTCCACCAA+CGG | 0.648002 | 2_4:+14919116 | None:intergenic |
| CCGTCACCGGAGTGTGACGG+TGG | 0.648753 | 2_4:-14919761 | Msa0317270:CDS |
| TCCACACAAAGCTTCACCGT+CGG | 0.651858 | 2_4:+14919623 | None:intergenic |
| TCCATGGACGCAAGAGCACG+CGG | 0.655560 | 2_4:-14919456 | Msa0317270:CDS |
| ACCGACGGTGAAGCTTTGTG+TGG | 0.656075 | 2_4:-14919624 | Msa0317270:CDS |
| TGTGGAAGAAGGTGGAATCG+CGG | 0.656823 | 2_4:-14919015 | Msa0317270:CDS |
| GAGAGCGGTGAGTGCTGGTG+TGG | 0.665360 | 2_4:-14919144 | Msa0317270:CDS |
| TTCTGCGAAAGAGCGACAAG+AGG | 0.665494 | 2_4:+14918867 | None:intergenic |
| GCTTAGCTGGAATTGACGAA+GGG | 0.668649 | 2_4:-14919049 | Msa0317270:CDS |
| CACGCAGTGAGCTAGTGACA+CGG | 0.672430 | 2_4:+14917834 | None:intergenic |
| TTCAACAGAAGCGAAACCAA+CGG | 0.673733 | 2_4:+14919239 | None:intergenic |
| GATGATGGAGAAAGCAATGG+TGG | 0.677671 | 2_4:-14919081 | Msa0317270:CDS |
| TCCGCACTTTCACAACAAGT+GGG | 0.679803 | 2_4:+14917629 | None:intergenic |
| TAAGCAGAACAAAGAGAGAG+CGG | 0.683784 | 2_4:-14919159 | Msa0317270:CDS |
| AAGCGAGTTCTCCGAGACGG+AGG | 0.695212 | 2_4:+14919918 | None:intergenic |
| AACAGAAGCGAAACCAACGG+TGG | 0.719199 | 2_4:+14919242 | None:intergenic |
| AGAGACTTCTAAGCAGAACG+CGG | 0.724526 | 2_4:-14919333 | Msa0317270:CDS |
| CGTGTCACTAGCTCACTGCG+TGG | 0.734195 | 2_4:-14917833 | Msa0317270:three_prime_UTR |
| GCAGTGAGCTAGTGACACGG+TGG | 0.777874 | 2_4:+14917837 | None:intergenic |
| GCGTCGGTAAGCATTCACCG+TGG | 0.796363 | 2_4:+14917774 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTAATCTTTATAATAAT+AGG | + | chr2_4:14919004-14919023 | None:intergenic | 10.0% |
| !! | ATGAAATGAAATGAAATTAA+AGG | + | chr2_4:14917098-14917117 | None:intergenic | 15.0% |
| !! | GTATAATATATATACACAAT+AGG | + | chr2_4:14918840-14918859 | None:intergenic | 15.0% |
| !!! | ATTAGGTTTTTAAATTTCTT+TGG | - | chr2_4:14919732-14919751 | Msa0317270:CDS | 15.0% |
| !! | AATAGATGAATGATATTGAT+AGG | + | chr2_4:14917367-14917386 | None:intergenic | 20.0% |
| !! | TTGATTTATGTATTGAAAAC+AGG | - | chr2_4:14918083-14918102 | Msa0317270:three_prime_UTR | 20.0% |
| !! | TGATTTATGTATTGAAAACA+GGG | - | chr2_4:14918084-14918103 | Msa0317270:three_prime_UTR | 20.0% |
| !! | CATTTCATGATTAGAATAAA+GGG | + | chr2_4:14918750-14918769 | None:intergenic | 20.0% |
| !! | ACATTTCATGATTAGAATAA+AGG | + | chr2_4:14918751-14918770 | None:intergenic | 20.0% |
| !!! | ATAAAGTATTCTAATTGATG+TGG | - | chr2_4:14919046-14919065 | Msa0317270:CDS | 20.0% |
| !!! | TAATCCTTGAATTTTTCTTT+AGG | - | chr2_4:14919091-14919110 | Msa0317270:CDS | 20.0% |
| !! | ATTGATTATTGTGTATATAG+CGG | - | chr2_4:14919388-14919407 | Msa0317270:CDS | 20.0% |
| !! | GAATGTTTAGAAGTAAAATA+TGG | - | chr2_4:14920121-14920140 | Msa0317270:CDS | 20.0% |
| ! | AATGAAATGAAATTAAAGGC+TGG | + | chr2_4:14917094-14917113 | None:intergenic | 25.0% |
| ! | TAATGGAAAACGATTTGAAT+TGG | + | chr2_4:14917337-14917356 | None:intergenic | 25.0% |
| !!! | TATTGATAGGTTTTTGGTAA+TGG | + | chr2_4:14917354-14917373 | None:intergenic | 25.0% |
| !! | GAATGATATTGATAGGTTTT+TGG | + | chr2_4:14917360-14917379 | None:intergenic | 25.0% |
| ! | AAGAAACTGATATTTAATGC+TGG | - | chr2_4:14918047-14918066 | Msa0317270:three_prime_UTR | 25.0% |
| !! | AATAAACCTTTTGAATCCTA+TGG | + | chr2_4:14918657-14918676 | None:intergenic | 25.0% |
| ! | TCAAGATATCTTAAATAACC+AGG | + | chr2_4:14918713-14918732 | None:intergenic | 25.0% |
| ! | ATATACATATGAGGAAAAAC+AGG | + | chr2_4:14918785-14918804 | None:intergenic | 25.0% |
| ! | TTTCAGCATATATACATATG+AGG | + | chr2_4:14918794-14918813 | None:intergenic | 25.0% |
| ! | AATGCCTAAAGAAAAATTCA+AGG | + | chr2_4:14919098-14919117 | None:intergenic | 25.0% |
| ! | AGAGAACTTAATGAATTAAC+AGG | + | chr2_4:14919239-14919258 | None:intergenic | 25.0% |
| !!! | ATTTTGGTTATTAGTTAGGA+AGG | - | chr2_4:14919350-14919369 | Msa0317270:CDS | 25.0% |
| ! | TTAAAAACCTAATCAACCAA+AGG | + | chr2_4:14919725-14919744 | None:intergenic | 25.0% |
| !! | ACCAGAAACTTGTAATATTT+TGG | - | chr2_4:14920181-14920200 | Msa0317270:five_prime_UTR | 25.0% |
| ! | CTGTAACGAATTTGAGATTA+GGG | + | chr2_4:14917269-14917288 | None:intergenic | 30.0% |
| ! | ACTGTAACGAATTTGAGATT+AGG | + | chr2_4:14917270-14917289 | None:intergenic | 30.0% |
| TAATCTCAAATTCGTTACAG+TGG | - | chr2_4:14917269-14917288 | Msa0317270:three_prime_UTR | 30.0% | |
| GAAGAGAATAAAAGCTCAAT+TGG | - | chr2_4:14918161-14918180 | Msa0317270:CDS | 30.0% | |
| TTCATACCATAGGATTCAAA+AGG | - | chr2_4:14918648-14918667 | Msa0317270:intron | 30.0% | |
| ! | TTAGTAATTTTATGACCACC+TGG | - | chr2_4:14918692-14918711 | Msa0317270:intron | 30.0% |
| AGATATCTTAAATAACCAGG+TGG | + | chr2_4:14918710-14918729 | None:intergenic | 30.0% | |
| ATATCTTGACTTTGAGTGTT+TGG | - | chr2_4:14918724-14918743 | Msa0317270:intron | 30.0% | |
| TAATAAACCTCGACAAGAAA+AGG | - | chr2_4:14918873-14918892 | Msa0317270:CDS | 30.0% | |
| AATAAACCTCGACAAGAAAA+GGG | - | chr2_4:14918874-14918893 | Msa0317270:CDS | 30.0% | |
| ! | TTTTTGTGGAAGAATAGATC+TGG | - | chr2_4:14919195-14919214 | Msa0317270:CDS | 30.0% |
| ! | AGAGAAGTAATTGCGTATTT+TGG | - | chr2_4:14919334-14919353 | Msa0317270:CDS | 30.0% |
| !!! | GCGTATTTTGGTTATTAGTT+AGG | - | chr2_4:14919346-14919365 | Msa0317270:CDS | 30.0% |
| AGCTATATTCATGCATCTAA+AGG | + | chr2_4:14919504-14919523 | None:intergenic | 30.0% | |
| TTAGATGCATGAATATAGCT+AGG | - | chr2_4:14919504-14919523 | Msa0317270:CDS | 30.0% | |
| AACACAACAAATTGGAACAA+GGG | + | chr2_4:14919546-14919565 | None:intergenic | 30.0% | |
| AAACACAACAAATTGGAACA+AGG | + | chr2_4:14919547-14919566 | None:intergenic | 30.0% | |
| AATTTAACCAAAAGGAGCTA+TGG | + | chr2_4:14919883-14919902 | None:intergenic | 30.0% | |
| !! | ATAGCTCCTTTTGGTTAAAT+TGG | - | chr2_4:14919882-14919901 | Msa0317270:CDS | 30.0% |
| ! | CAAACGTACACATATTTTCA+TGG | - | chr2_4:14920044-14920063 | Msa0317270:CDS | 30.0% |
| TCACGAAATATCAGTTTGAA+TGG | - | chr2_4:14920092-14920111 | Msa0317270:CDS | 30.0% | |
| GCCAAAATATTACAAGTTTC+TGG | + | chr2_4:14920185-14920204 | None:intergenic | 30.0% | |
| TGGTGAACACTGAAATATAA+AGG | + | chr2_4:14920325-14920344 | None:intergenic | 30.0% | |
| TATCTGATCTTTCAATAGCT+TGG | + | chr2_4:14920345-14920364 | None:intergenic | 30.0% | |
| ATAGTGAGAAAAAGTGAGTG+TGG | + | chr2_4:14917204-14917223 | None:intergenic | 35.0% | |
| TCTAGAGAAACCATTGTTGA+AGG | + | chr2_4:14917303-14917322 | None:intergenic | 35.0% | |
| TCAAAATCACAGCGAAACAT+AGG | - | chr2_4:14917390-14917409 | Msa0317270:three_prime_UTR | 35.0% | |
| GTTATCTTCATCGAAGATAC+TGG | + | chr2_4:14917439-14917458 | None:intergenic | 35.0% | |
| ! | TTTTCCGGATTTGTGATTCT+TGG | + | chr2_4:14917550-14917569 | None:intergenic | 35.0% |
| !!! | TTCGGAAGTTGATGATTTTC+CGG | + | chr2_4:14917565-14917584 | None:intergenic | 35.0% |
| !! | AAGATCTAGAAGGTCTTGTT+CGG | + | chr2_4:14917583-14917602 | None:intergenic | 35.0% |
| AAGCTTGAGAAAGATCTAGA+AGG | + | chr2_4:14917593-14917612 | None:intergenic | 35.0% | |
| !! | GATTATTGAGAGTATTTCGC+CGG | - | chr2_4:14917785-14917804 | Msa0317270:three_prime_UTR | 35.0% |
| !!! | GCTGATAATCGTGTTTTGAT+TGG | - | chr2_4:14917915-14917934 | Msa0317270:three_prime_UTR | 35.0% |
| !! | TGTTGAATGGTTCTAACAGA+GGG | - | chr2_4:14918219-14918238 | Msa0317270:intron | 35.0% |
| ! | TGCATTTTGCTTCATACCAT+AGG | - | chr2_4:14918638-14918657 | Msa0317270:intron | 35.0% |
| TTAACTGTCAGTCAACATCT+GGG | - | chr2_4:14918976-14918995 | Msa0317270:CDS | 35.0% | |
| TTTCTCTCTATCATTGCTCT+TGG | - | chr2_4:14919168-14919187 | Msa0317270:CDS | 35.0% | |
| !!! | TTGCTCTTGGCTATTTTTTG+TGG | - | chr2_4:14919181-14919200 | Msa0317270:CDS | 35.0% |
| !!! | AGTTCTCTGTTTTGTTTTGC+AGG | - | chr2_4:14919251-14919270 | Msa0317270:CDS | 35.0% |
| TACAGTGTGCTAAACATTCT+TGG | - | chr2_4:14919424-14919443 | Msa0317270:CDS | 35.0% | |
| TGCATGAATATAGCTAGGTT+TGG | - | chr2_4:14919509-14919528 | Msa0317270:CDS | 35.0% | |
| !! | TTCCAATTTGTTGTGTTTCC+AGG | - | chr2_4:14919549-14919568 | Msa0317270:CDS | 35.0% |
| ! | AAACCCTTTTCCCAAAACTA+GGG | + | chr2_4:14919767-14919786 | None:intergenic | 35.0% |
| CAAGCTCCAATTTAACCAAA+AGG | + | chr2_4:14919891-14919910 | None:intergenic | 35.0% | |
| GAGTATCAGATATGGTATTC+TGG | + | chr2_4:14920070-14920089 | None:intergenic | 35.0% | |
| TATGTGTTCTTGACAAAAGC+AGG | - | chr2_4:14920156-14920175 | Msa0317270:five_prime_UTR | 35.0% | |
| GAAACCATTGTTGAAGGTGA+AGG | + | chr2_4:14917297-14917316 | None:intergenic | 40.0% | |
| GCTTCCAAGAATCACAAATC+CGG | - | chr2_4:14917543-14917562 | Msa0317270:three_prime_UTR | 40.0% | |
| GCTTGTAGTAGTGATATCTC+CGG | - | chr2_4:14917633-14917652 | Msa0317270:three_prime_UTR | 40.0% | |
| GCAAAGAGAGAATTTCTCGA+CGG | - | chr2_4:14917761-14917780 | Msa0317270:three_prime_UTR | 40.0% | |
| TGGTTTACAGTCTTCTTCAG+TGG | - | chr2_4:14917842-14917861 | Msa0317270:three_prime_UTR | 40.0% | |
| !!! | CGTGTTTTGATTGGTGAATC+AGG | - | chr2_4:14917924-14917943 | Msa0317270:three_prime_UTR | 40.0% |
| CTTTGCTTGTTCCTTTGCTT+CGG | - | chr2_4:14917955-14917974 | Msa0317270:three_prime_UTR | 40.0% | |
| !!! | TGCTCTTTTGAGTTTAGCGT+TGG | - | chr2_4:14918136-14918155 | Msa0317270:CDS | 40.0% |
| !!! | TCTTTTGAGTTTAGCGTTGG+TGG | - | chr2_4:14918139-14918158 | Msa0317270:CDS | 40.0% |
| AAAAGCTCAATTGGAGCTTC+AGG | - | chr2_4:14918170-14918189 | Msa0317270:CDS | 40.0% | |
| AAAGCTCAATTGGAGCTTCA+GGG | - | chr2_4:14918171-14918190 | Msa0317270:CDS | 40.0% | |
| TTCAACAGAAGCGAAACCAA+CGG | + | chr2_4:14918206-14918225 | None:intergenic | 40.0% | |
| TTGGTTTCGCTTCTGTTGAA+TGG | - | chr2_4:14918206-14918225 | Msa0317270:intron | 40.0% | |
| !! | CTGTTGAATGGTTCTAACAG+AGG | - | chr2_4:14918218-14918237 | Msa0317270:intron | 40.0% |
| TAAGCAGAACAAAGAGAGAG+CGG | - | chr2_4:14918283-14918302 | Msa0317270:intron | 40.0% | |
| TTGTGGAAGCCATTGAAGAT+GGG | - | chr2_4:14918453-14918472 | Msa0317270:intron | 40.0% | |
| TTTCACAGACCCATCTTCAA+TGG | + | chr2_4:14918465-14918484 | None:intergenic | 40.0% | |
| ATTGAAGATGGGTCTGTGAA+AGG | - | chr2_4:14918464-14918483 | Msa0317270:intron | 40.0% | |
| !! | GCTGAAAGTGTTACAAACAG+AGG | - | chr2_4:14918524-14918543 | Msa0317270:intron | 40.0% |
| ! | AGAGGATTGCTTGTTAGAGA+AGG | - | chr2_4:14918542-14918561 | Msa0317270:intron | 40.0% |
| ! | GATTGCTTGTTAGAGAAGGT+GGG | - | chr2_4:14918546-14918565 | Msa0317270:intron | 40.0% |
| TTTACCTTATGCTTAGCTCG+AGG | + | chr2_4:14918608-14918627 | None:intergenic | 40.0% | |
| CTTAACTGTCAGTCAACATC+TGG | - | chr2_4:14918975-14918994 | Msa0317270:CDS | 40.0% | |
| CTAATTGATGTGGCTGAATG+AGG | - | chr2_4:14919056-14919075 | Msa0317270:CDS | 40.0% | |
| GTGTGCTAAACATTCTTGGA+AGG | - | chr2_4:14919428-14919447 | Msa0317270:CDS | 40.0% | |
| CTCCTGGAAACACAACAAAT+TGG | + | chr2_4:14919554-14919573 | None:intergenic | 40.0% | |
| TTGTGTTTCCAGGAGTTACA+TGG | - | chr2_4:14919559-14919578 | Msa0317270:CDS | 40.0% | |
| TCATGCTTCAACTACATCCA+CGG | - | chr2_4:14919651-14919670 | Msa0317270:CDS | 40.0% | |
| AAGACAACCATGCTTGTGTT+TGG | + | chr2_4:14919698-14919717 | None:intergenic | 40.0% | |
| CTTTGAGCCTTTGGTTGATT+AGG | - | chr2_4:14919715-14919734 | Msa0317270:CDS | 40.0% | |
| !! | GTACAGATGACCCTAGTTTT+GGG | - | chr2_4:14919754-14919773 | Msa0317270:CDS | 40.0% |
| !!! | ATGACCCTAGTTTTGGGAAA+AGG | - | chr2_4:14919760-14919779 | Msa0317270:CDS | 40.0% |
| !!! | TGACCCTAGTTTTGGGAAAA+GGG | - | chr2_4:14919761-14919780 | Msa0317270:CDS | 40.0% |
| ! | GAAACCCTTTTCCCAAAACT+AGG | + | chr2_4:14919768-14919787 | None:intergenic | 40.0% |
| AACAGATGAAGCTGAGTAAC+TGG | + | chr2_4:14919961-14919980 | None:intergenic | 40.0% | |
| ! | TCGTGACAGAGTATCAGATA+TGG | + | chr2_4:14920078-14920097 | None:intergenic | 40.0% |
| ! | TTGGCATTTTTCCACACAAC+TGG | - | chr2_4:14920200-14920219 | Msa0317270:five_prime_UTR | 40.0% |
| TCTGACAATTTCCAGTTGTG+TGG | + | chr2_4:14920214-14920233 | None:intergenic | 40.0% | |
| GGAACCTTCACCTTCAACAA+TGG | - | chr2_4:14917290-14917309 | Msa0317270:three_prime_UTR | 45.0% | |
| ACTGGATCTTCTTGTTCGCA+TGG | + | chr2_4:14917421-14917440 | None:intergenic | 45.0% | |
| CGATACACAGGTGGATCTTT+CGG | + | chr2_4:14917478-14917497 | None:intergenic | 45.0% | |
| CGAAAGATCCACCTGTGTAT+CGG | - | chr2_4:14917476-14917495 | Msa0317270:three_prime_UTR | 45.0% | |
| ! | GAGATTTTCCGATACACAGG+TGG | + | chr2_4:14917487-14917506 | None:intergenic | 45.0% |
| ! | GGTGAGATTTTCCGATACAC+AGG | + | chr2_4:14917490-14917509 | None:intergenic | 45.0% |
| CTTTGCAAAAACCCCATGCA+AGG | + | chr2_4:14917747-14917766 | None:intergenic | 45.0% | |
| !! | TATTGAGAGTATTTCGCCGG+AGG | - | chr2_4:14917788-14917807 | Msa0317270:three_prime_UTR | 45.0% |
| CTTCTTCAGTGGCTGTGAAA+CGG | - | chr2_4:14917853-14917872 | Msa0317270:three_prime_UTR | 45.0% | |
| CGAAGCAAAGGAACAAGCAA+AGG | + | chr2_4:14917957-14917976 | None:intergenic | 45.0% | |
| AGAGACTTCTAAGCAGAACG+CGG | - | chr2_4:14918109-14918128 | Msa0317270:three_prime_UTR | 45.0% | |
| AAGCTCAATTGGAGCTTCAG+GGG | - | chr2_4:14918172-14918191 | Msa0317270:CDS | 45.0% | |
| !! | TGGGATGATGGAGAAAGCAA+TGG | - | chr2_4:14918358-14918377 | Msa0317270:intron | 45.0% |
| !! | GATGATGGAGAAAGCAATGG+TGG | - | chr2_4:14918361-14918380 | Msa0317270:intron | 45.0% |
| ! | GTGGTGTTGAATAGCTTAGC+TGG | - | chr2_4:14918380-14918399 | Msa0317270:intron | 45.0% |
| AGCTTAGCTGGAATTGACGA+AGG | - | chr2_4:14918392-14918411 | Msa0317270:intron | 45.0% | |
| GCTTAGCTGGAATTGACGAA+GGG | - | chr2_4:14918393-14918412 | Msa0317270:intron | 45.0% | |
| AAGGAAGCGATTGTGGAAGA+AGG | - | chr2_4:14918416-14918435 | Msa0317270:intron | 45.0% | |
| CTTGTGGAAGCCATTGAAGA+TGG | - | chr2_4:14918452-14918471 | Msa0317270:intron | 45.0% | |
| AGATGGGTCTGTGAAAGGAA+AGG | - | chr2_4:14918469-14918488 | Msa0317270:intron | 45.0% | |
| ! | GGATTGCTTGTTAGAGAAGG+TGG | - | chr2_4:14918545-14918564 | Msa0317270:intron | 45.0% |
| AACTCCTCGAGCTAAGCATA+AGG | - | chr2_4:14918601-14918620 | Msa0317270:intron | 45.0% | |
| ! | AGAAGACCCTTTTCTTGTCG+AGG | + | chr2_4:14918883-14918902 | None:intergenic | 45.0% |
| TGTGTATATAGCGGCTTTGC+TGG | - | chr2_4:14919397-14919416 | Msa0317270:CDS | 45.0% | |
| CATGGTTGTCTTTGAGCCTT+TGG | - | chr2_4:14919706-14919725 | Msa0317270:CDS | 45.0% | |
| ! | GGTACAGATGACCCTAGTTT+TGG | - | chr2_4:14919753-14919772 | Msa0317270:CDS | 45.0% |
| CACTTTCACAACAAGTGGGA+AGG | + | chr2_4:14919812-14919831 | None:intergenic | 45.0% | |
| !! | TCCCACTTGTTGTGAAAGTG+CGG | - | chr2_4:14919812-14919831 | Msa0317270:CDS | 45.0% |
| TCCGCACTTTCACAACAAGT+GGG | + | chr2_4:14919816-14919835 | None:intergenic | 45.0% | |
| ! | CCAGATAGCAGTGAAGTACT+AGG | + | chr2_4:14919847-14919866 | None:intergenic | 45.0% |
| CCTAGTACTTCACTGCTATC+TGG | - | chr2_4:14919844-14919863 | Msa0317270:CDS | 45.0% | |
| ! | TCTGTGTCCATAGCTCCTTT+TGG | - | chr2_4:14919873-14919892 | Msa0317270:CDS | 45.0% |
| GCGAGTCTGTAAATTCAGTC+AGG | - | chr2_4:14920299-14920318 | Msa0317270:five_prime_UTR | 45.0% | |
| ACGGAGGTCGACGATAGAAT+CGG | + | chr2_4:14917511-14917530 | None:intergenic | 50.0% | |
| ATATCTCCGGTGAGCTTCAG+AGG | - | chr2_4:14917646-14917665 | Msa0317270:three_prime_UTR | 50.0% | |
| TGTTGAACCTGAGCCTTGCA+TGG | - | chr2_4:14917731-14917750 | Msa0317270:three_prime_UTR | 50.0% | |
| GTTGAACCTGAGCCTTGCAT+GGG | - | chr2_4:14917732-14917751 | Msa0317270:three_prime_UTR | 50.0% | |
| TTGAACCTGAGCCTTGCATG+GGG | - | chr2_4:14917733-14917752 | Msa0317270:three_prime_UTR | 50.0% | |
| AAAAACCCCATGCAAGGCTC+AGG | + | chr2_4:14917741-14917760 | None:intergenic | 50.0% | |
| TCCACACAAAGCTTCACCGT+CGG | + | chr2_4:14917822-14917841 | None:intergenic | 50.0% | |
| ! | ACGGTGAAGCTTTGTGTGGA+TGG | - | chr2_4:14917822-14917841 | Msa0317270:three_prime_UTR | 50.0% |
| GGATCACTACACCGAAGCAA+AGG | + | chr2_4:14917969-14917988 | None:intergenic | 50.0% | |
| ! | TGCTTCGGTGTAGTGATCCA+TGG | - | chr2_4:14917970-14917989 | Msa0317270:three_prime_UTR | 50.0% |
| AACAGAAGCGAAACCAACGG+TGG | + | chr2_4:14918203-14918222 | None:intergenic | 50.0% | |
| TGAGCAAGGGAATGGGATGA+TGG | - | chr2_4:14918346-14918365 | Msa0317270:intron | 50.0% | |
| AGCTGGAATTGACGAAGGGA+AGG | - | chr2_4:14918397-14918416 | Msa0317270:intron | 50.0% | |
| GAAGCGATTGTGGAAGAAGG+TGG | - | chr2_4:14918419-14918438 | Msa0317270:intron | 50.0% | |
| TGTGGAAGAAGGTGGAATCG+CGG | - | chr2_4:14918427-14918446 | Msa0317270:intron | 50.0% | |
| TTCTGCGAAAGAGCGACAAG+AGG | + | chr2_4:14918578-14918597 | None:intergenic | 50.0% | |
| CTTGTCGCTCTTTCGCAGAA+TGG | - | chr2_4:14918578-14918597 | Msa0317270:intron | 50.0% | |
| AACACACGCCATGTAACTCC+TGG | + | chr2_4:14919570-14919589 | None:intergenic | 50.0% | |
| GGAGTTACATGGCGTGTGTT+TGG | - | chr2_4:14919570-14919589 | Msa0317270:CDS | 50.0% | |
| ! | AGCTAGTGACACGGTGGATT+CGG | + | chr2_4:14919602-14919621 | None:intergenic | 50.0% |
| CTCCGCACTTTCACAACAAG+TGG | + | chr2_4:14919817-14919836 | None:intergenic | 50.0% | |
| TCTATCGTCGACCTCCGTCT+CGG | - | chr2_4:14917513-14917532 | Msa0317270:three_prime_UTR | 55.0% | |
| TGGAAGCGAGTTCTCCGAGA+CGG | + | chr2_4:14917530-14917549 | None:intergenic | 55.0% | |
| !! | CGCTAACCTCTGAAGCTCAC+CGG | + | chr2_4:14917655-14917674 | None:intergenic | 55.0% |
| ! | ACCGTCGGTTGAAGATCCTC+CGG | + | chr2_4:14917807-14917826 | None:intergenic | 55.0% |
| ! | ACCGACGGTGAAGCTTTGTG+TGG | - | chr2_4:14917818-14917837 | Msa0317270:three_prime_UTR | 55.0% |
| AAAGAGAGAGCGGTGAGTGC+TGG | - | chr2_4:14918293-14918312 | Msa0317270:intron | 55.0% | |
| TGGTGGCTGAGCAAGGGAAT+GGG | - | chr2_4:14918339-14918358 | Msa0317270:intron | 55.0% | |
| CGAAGGGAAGGAAGCGATTG+TGG | - | chr2_4:14918409-14918428 | Msa0317270:intron | 55.0% | |
| TGCGAAAGAGCGACAAGAGG+AGG | + | chr2_4:14918575-14918594 | None:intergenic | 55.0% | |
| CACGCAGTGAGCTAGTGACA+CGG | + | chr2_4:14919611-14919630 | None:intergenic | 55.0% | |
| GCTTGTGTTTGGTCCTGCGT+CGG | + | chr2_4:14919687-14919706 | None:intergenic | 55.0% | |
| CGCAGGACCAAACACAAGCA+TGG | - | chr2_4:14919688-14919707 | Msa0317270:CDS | 55.0% | |
| AAGCGAGTTCTCCGAGACGG+AGG | + | chr2_4:14917527-14917546 | None:intergenic | 60.0% | |
| ! | TGGAGGTGGAGGTGATGGTG+TGG | - | chr2_4:14917701-14917720 | Msa0317270:three_prime_UTR | 60.0% |
| GCCGGAGGATCTTCAACCGA+CGG | - | chr2_4:14917803-14917822 | Msa0317270:three_prime_UTR | 60.0% | |
| GGCTGTGAAACGGTCTGCAG+CGG | - | chr2_4:14917863-14917882 | Msa0317270:three_prime_UTR | 60.0% | |
| GGTCTGCAGCGGCGAAATTG+AGG | - | chr2_4:14917874-14917893 | Msa0317270:three_prime_UTR | 60.0% | |
| ! | TCCATGGACGCAAGAGCACG+CGG | - | chr2_4:14917986-14918005 | Msa0317270:three_prime_UTR | 60.0% |
| TTCAGGGGCGATTCCACCGT+TGG | - | chr2_4:14918187-14918206 | Msa0317270:intron | 60.0% | |
| TGCTGGTGTGGTGAAGCCGT+TGG | - | chr2_4:14918310-14918329 | Msa0317270:intron | 60.0% | |
| TGGTGTGGTGAAGCCGTTGG+TGG | - | chr2_4:14918313-14918332 | Msa0317270:intron | 60.0% | |
| TCAGCCACCAGCTCCACCAA+CGG | + | chr2_4:14918329-14918348 | None:intergenic | 60.0% | |
| TGGAGCTGGTGGCTGAGCAA+GGG | - | chr2_4:14918333-14918352 | Msa0317270:intron | 60.0% | |
| CTGGTGGCTGAGCAAGGGAA+TGG | - | chr2_4:14918338-14918357 | Msa0317270:intron | 60.0% | |
| GCAGTGAGCTAGTGACACGG+TGG | + | chr2_4:14919608-14919627 | None:intergenic | 60.0% | |
| ! | CGTGTCACTAGCTCACTGCG+TGG | - | chr2_4:14919609-14919628 | Msa0317270:CDS | 60.0% |
| ! | GCGTCGGTAAGCATTCACCG+TGG | + | chr2_4:14919671-14919690 | None:intergenic | 60.0% |
| CGGTGAATGCTTACCGACGC+AGG | - | chr2_4:14919671-14919690 | Msa0317270:CDS | 60.0% | |
| GTTAGCGACGCTGCCGTCAC+CGG | - | chr2_4:14917668-14917687 | Msa0317270:three_prime_UTR | 65.0% | |
| CTGCCGTCACCGGAGTGTGA+CGG | - | chr2_4:14917678-14917697 | Msa0317270:three_prime_UTR | 65.0% | |
| CCACCGTCACACTCCGGTGA+CGG | + | chr2_4:14917684-14917703 | None:intergenic | 65.0% | |
| TCACCGGAGTGTGACGGTGG+AGG | - | chr2_4:14917684-14917703 | Msa0317270:three_prime_UTR | 65.0% | |
| CCACCTCCACCGTCACACTC+CGG | + | chr2_4:14917690-14917709 | None:intergenic | 65.0% | |
| GAGTGTGACGGTGGAGGTGG+AGG | - | chr2_4:14917690-14917709 | Msa0317270:three_prime_UTR | 65.0% | |
| GACGGTGGAGGTGGAGGTGA+TGG | - | chr2_4:14917696-14917715 | Msa0317270:three_prime_UTR | 65.0% | |
| ACCGCGTGCTCTTGCGTCCA+TGG | + | chr2_4:14917990-14918009 | None:intergenic | 65.0% | |
| ! | GACGCAAGAGCACGCGGTGA+CGG | - | chr2_4:14917992-14918011 | Msa0317270:three_prime_UTR | 65.0% |
| !! | GAGAGCGGTGAGTGCTGGTG+TGG | - | chr2_4:14918298-14918317 | Msa0317270:intron | 65.0% |
| ! | GGTGAAGCCGTTGGTGGAGC+TGG | - | chr2_4:14918319-14918338 | Msa0317270:intron | 65.0% |
| ! | GAAGCCGTTGGTGGAGCTGG+TGG | - | chr2_4:14918322-14918341 | Msa0317270:intron | 65.0% |
| GTGGAGCTGGTGGCTGAGCA+AGG | - | chr2_4:14918332-14918351 | Msa0317270:intron | 65.0% | |
| AGGTGGAATCGCGGCGCTTG+TGG | - | chr2_4:14918436-14918455 | Msa0317270:intron | 65.0% | |
| CCGTCACCGGAGTGTGACGG+TGG | - | chr2_4:14917681-14917700 | Msa0317270:three_prime_UTR | 70.0% | |
| CCGGAGTGTGACGGTGGAGG+TGG | - | chr2_4:14917687-14917706 | Msa0317270:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 14917079 | 14920385 | 14917079 | ID=Msa0317270;Name=Msa0317270 |
| chr2_4 | mRNA | 14917079 | 14920385 | 14917079 | ID=Msa0317270-mRNA-1;Parent=Msa0317270;Name=Msa0317270-mRNA-1;_AED=0.00;_eAED=0.00;_QI=230|1|1|1|1|1|2|1050|458 |
| chr2_4 | exon | 14917079 | 14918191 | 14917079 | ID=Msa0317270-mRNA-1:exon:5599;Parent=Msa0317270-mRNA-1 |
| chr2_4 | exon | 14918842 | 14920385 | 14918842 | ID=Msa0317270-mRNA-1:exon:5598;Parent=Msa0317270-mRNA-1 |
| chr2_4 | five_prime_UTR | 14920156 | 14920385 | 14920156 | ID=Msa0317270-mRNA-1:five_prime_utr;Parent=Msa0317270-mRNA-1 |
| chr2_4 | CDS | 14918842 | 14920155 | 14918842 | ID=Msa0317270-mRNA-1:cds;Parent=Msa0317270-mRNA-1 |
| chr2_4 | CDS | 14918129 | 14918191 | 14918129 | ID=Msa0317270-mRNA-1:cds;Parent=Msa0317270-mRNA-1 |
| chr2_4 | three_prime_UTR | 14917079 | 14918128 | 14917079 | ID=Msa0317270-mRNA-1:three_prime_utr;Parent=Msa0317270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
