Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465470 | XP_003601279.1 | 97.736 | 795 | 17 | 1 | 1 | 794 | 1 | 795 | 0.0 | 1589 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465470 | sp|F4HSX9|KLCR3_ARATH | 65.809 | 544 | 174 | 4 | 248 | 783 | 103 | 642 | 0.0 | 730 |
Msa0465470 | sp|F4HSX9|KLCR3_ARATH | 48.148 | 81 | 42 | 0 | 81 | 161 | 14 | 94 | 1.58e-14 | 81.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465470 | G7J5H3 | 97.736 | 795 | 17 | 1 | 1 | 794 | 1 | 795 | 0.0 | 1589 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0164460 | Msa0465470 | 0.812920 | 3.325006e-51 | -8.615850e-47 |
Msa0465470 | Msa0511330 | 0.938235 | 9.405370e-99 | -8.615850e-47 |
Msa0465470 | Msa0511420 | 0.960253 | 2.386230e-118 | -8.615850e-47 |
Msa0465470 | Msa0616430 | 0.800305 | 1.533825e-48 | -8.615850e-47 |
Msa0465470 | Msa0699760 | 0.803057 | 4.179286e-49 | -8.615850e-47 |
Msa0465470 | Msa1171760 | 0.914731 | 1.358366e-84 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465470 | MtrunA17_Chr3g0117701 | 98.305 | 767 | 13 | 0 | 28 | 794 | 1 | 767 | 0.0 | 1546 |
Msa0465470 | MtrunA17_Chr4g0059101 | 71.945 | 581 | 161 | 2 | 203 | 781 | 88 | 668 | 0.0 | 854 |
Msa0465470 | MtrunA17_Chr6g0450741 | 65.054 | 558 | 180 | 5 | 240 | 793 | 152 | 698 | 0.0 | 735 |
Msa0465470 | MtrunA17_Chr6g0450741 | 51.724 | 116 | 45 | 3 | 44 | 149 | 8 | 122 | 4.09e-20 | 95.5 |
Msa0465470 | MtrunA17_Chr8g0388631 | 62.992 | 508 | 187 | 1 | 279 | 785 | 64 | 571 | 0.0 | 692 |
Msa0465470 | MtrunA17_Chr8g0346601 | 60.990 | 505 | 195 | 1 | 280 | 784 | 52 | 554 | 0.0 | 654 |
Msa0465470 | MtrunA17_Chr1g0184181 | 26.523 | 509 | 358 | 6 | 272 | 773 | 83 | 582 | 1.11e-42 | 164 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465470 | AT1G27500.2 | 65.809 | 544 | 174 | 4 | 248 | 783 | 114 | 653 | 0.0 | 730 |
Msa0465470 | AT1G27500.2 | 48.148 | 81 | 42 | 0 | 81 | 161 | 25 | 105 | 1.58e-15 | 81.3 |
Msa0465470 | AT1G27500.1 | 65.809 | 544 | 174 | 4 | 248 | 783 | 103 | 642 | 0.0 | 730 |
Msa0465470 | AT1G27500.1 | 48.148 | 81 | 42 | 0 | 81 | 161 | 14 | 94 | 1.60e-15 | 81.3 |
Msa0465470 | AT3G27960.1 | 63.603 | 544 | 187 | 3 | 256 | 788 | 114 | 657 | 0.0 | 711 |
Msa0465470 | AT3G27960.1 | 43.182 | 132 | 51 | 5 | 40 | 170 | 4 | 112 | 4.12e-12 | 70.5 |
Msa0465470 | AT3G27960.3 | 63.603 | 544 | 187 | 3 | 256 | 788 | 114 | 657 | 0.0 | 711 |
Msa0465470 | AT3G27960.3 | 43.182 | 132 | 51 | 5 | 40 | 170 | 4 | 112 | 4.12e-12 | 70.5 |
Msa0465470 | AT4G10840.1 | 57.913 | 575 | 223 | 6 | 222 | 785 | 25 | 591 | 0.0 | 669 |
Msa0465470 | AT3G27960.2 | 63.825 | 481 | 163 | 3 | 256 | 725 | 114 | 594 | 0.0 | 638 |
Msa0465470 | AT3G27960.2 | 43.182 | 132 | 51 | 5 | 40 | 170 | 4 | 112 | 3.39e-12 | 70.5 |
Msa0465470 | AT4G10840.2 | 57.282 | 515 | 201 | 6 | 222 | 725 | 25 | 531 | 0.0 | 591 |
Msa0465470 | AT2G31240.1 | 26.916 | 509 | 359 | 6 | 272 | 773 | 101 | 603 | 9.93e-40 | 156 |
Find 225 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGTCCAGAGGCATATTT+TGG | 0.153258 | 3_3:-65879764 | Msa0465470:CDS |
AAAGAATCAAGTTTCTTTAA+AGG | 0.155018 | 3_3:+65878078 | None:intergenic |
CTATATACTCCAAGCGTTTC+AGG | 0.160309 | 3_3:+65878854 | None:intergenic |
TTGATTCTTTGATGCTTTAC+AGG | 0.208801 | 3_3:-65878065 | Msa0465470:three_prime_UTR |
ATTTGTTGTCACAGGTATTC+TGG | 0.218490 | 3_3:-65880934 | Msa0465470:intron |
TTGACGAGTGTTATACTTAA+TGG | 0.224583 | 3_3:-65877980 | Msa0465470:three_prime_UTR |
CAGATGCCACTTCCGCTTCT+TGG | 0.253038 | 3_3:+65879491 | None:intergenic |
TGGTATTGCTCTTAATCAAC+TGG | 0.262779 | 3_3:-65878972 | Msa0465470:CDS |
AGAGGAGGTGGAGGTGGAGG+GGG | 0.264395 | 3_3:-65880559 | Msa0465470:CDS |
TTATACTTAATGGGGTAAAA+TGG | 0.275982 | 3_3:-65877970 | Msa0465470:three_prime_UTR |
GGAAGAGGAGGTGGAGGTGG+AGG | 0.285387 | 3_3:-65880562 | Msa0465470:CDS |
ATGAAACTGTTTGAGAAGTT+TGG | 0.293874 | 3_3:-65880024 | Msa0465470:CDS |
TGAGGAAGCAAAGAGTGTTT+TGG | 0.304839 | 3_3:-65878900 | Msa0465470:CDS |
AATGAGTCGCGTTGAGAATT+CGG | 0.307148 | 3_3:-65880160 | Msa0465470:CDS |
GAGAAGAAATCATCCTTCTT+TGG | 0.307647 | 3_3:-65878992 | Msa0465470:CDS |
ACCCCATCATCCTGGAAATT+AGG | 0.314654 | 3_3:+65880747 | None:intergenic |
AAGGTTGAGTGATTTGTTAA+AGG | 0.318973 | 3_3:-65878205 | Msa0465470:CDS |
TGACGAGTGTTATACTTAAT+GGG | 0.321421 | 3_3:-65877979 | Msa0465470:three_prime_UTR |
CTTTAAAGGAAATCCTTATC+AGG | 0.322334 | 3_3:+65878092 | None:intergenic |
CGGAATTGCACCATTTGGTT+GGG | 0.324212 | 3_3:-65880611 | Msa0465470:CDS |
TCAGCAGCTTCTTCAATAGA+TGG | 0.329233 | 3_3:+65879610 | None:intergenic |
ATCACAAAACTTCGTGCTAT+TGG | 0.329949 | 3_3:-65879016 | Msa0465470:CDS |
TGGATGATTCTCTCCTTTGC+TGG | 0.330223 | 3_3:+65879378 | None:intergenic |
TGTTGACTTTCCCCGATATC+AGG | 0.331061 | 3_3:+65879886 | None:intergenic |
AATGGAAGAGGAGGTGGAGG+TGG | 0.332230 | 3_3:-65880565 | Msa0465470:CDS |
TGGTGAAACTTGTCGGTATT+TGG | 0.339201 | 3_3:-65879722 | Msa0465470:CDS |
CATGCTCTTGCTAAATTTGC+CGG | 0.339227 | 3_3:-65879862 | Msa0465470:CDS |
GAGGAGGTGGAGGTGGAGGG+GGG | 0.339394 | 3_3:-65880558 | Msa0465470:CDS |
AAACAAACTAGAGGAGTTAA+TGG | 0.352716 | 3_3:-65880225 | Msa0465470:CDS |
TGCGAGCGTCGCCGTCAAAA+AGG | 0.357744 | 3_3:+65878139 | None:intergenic |
CTTGCTTGCTTTAGTAATAT+CGG | 0.357866 | 3_3:+65880105 | None:intergenic |
GATGAGGGAGCTGGAGATAA+TGG | 0.359970 | 3_3:-65880583 | Msa0465470:CDS |
GAATTCAAAGAATTCTCCTT+TGG | 0.361948 | 3_3:-65880196 | Msa0465470:CDS |
ACCCCGTTTGTAACAATTCC+CGG | 0.363264 | 3_3:+65880888 | None:intergenic |
TCGATTGAGATTCCTGATAT+CGG | 0.368583 | 3_3:-65879898 | Msa0465470:CDS |
AAGAGGAGGTGGAGGTGGAG+GGG | 0.369474 | 3_3:-65880560 | Msa0465470:CDS |
GGAGTATATAGTAATCTTGC+AGG | 0.374241 | 3_3:-65878842 | Msa0465470:CDS |
GAACTCCTTGGAGACTTGAT+TGG | 0.374643 | 3_3:+65880801 | None:intergenic |
AGGGTCGGTCTTTGTACGTT+TGG | 0.381995 | 3_3:-65879350 | Msa0465470:CDS |
GTTTGGCTGACTTGTATAAC+AGG | 0.382339 | 3_3:-65879333 | Msa0465470:CDS |
CTGTCTGAAACTCTTTGATA+TGG | 0.391161 | 3_3:-65877789 | Msa0465470:three_prime_UTR |
TCTAGTGGGGAAACATCTTC+TGG | 0.391241 | 3_3:-65880516 | Msa0465470:CDS |
TTGTCAAACCACTGAATTCA+AGG | 0.391923 | 3_3:-65880341 | Msa0465470:CDS |
ATTGTTACAAACGGGGTTCA+TGG | 0.395239 | 3_3:-65880882 | Msa0465470:CDS |
TGGTAATGGGAAGCCGAGTT+TGG | 0.395609 | 3_3:-65880004 | Msa0465470:CDS |
GTGTGCAGCGTTATGCCTTA+AGG | 0.399879 | 3_3:-65878940 | Msa0465470:CDS |
TGATTCGGAATTGCACCATT+TGG | 0.399915 | 3_3:-65880616 | Msa0465470:CDS |
GGAGATAATGGAAGAGGAGG+TGG | 0.401440 | 3_3:-65880571 | Msa0465470:CDS |
TCGCCCTCGAGACAAAGTTT+TGG | 0.402595 | 3_3:-65880663 | Msa0465470:CDS |
CGATTGAGATTCCTGATATC+GGG | 0.404768 | 3_3:-65879897 | Msa0465470:CDS |
TGGGAAGCCGAGTTTGGAAT+TGG | 0.408392 | 3_3:-65879998 | Msa0465470:CDS |
AATTCAAAGAATTCTCCTTT+GGG | 0.410118 | 3_3:-65880195 | Msa0465470:CDS |
TGGAGCACGTTGTTAGTATG+AGG | 0.413215 | 3_3:-65878275 | Msa0465470:CDS |
TGCCGGGAATTGTTACAAAC+GGG | 0.416439 | 3_3:-65880890 | Msa0465470:CDS |
ATTTGCAACCATTGCCATGC+TGG | 0.416716 | 3_3:+65879516 | None:intergenic |
GTCCTAATTTCCAGGATGAT+GGG | 0.417051 | 3_3:-65880749 | Msa0465470:CDS |
GCTATTGTTCCTTGCTGACC+AGG | 0.418541 | 3_3:+65879118 | None:intergenic |
CTCTCCAGAGGAGCTTTAGC+AGG | 0.418882 | 3_3:+65880270 | None:intergenic |
AGTAATATCGGTGCTCGCTC+TGG | 0.418974 | 3_3:+65880117 | None:intergenic |
GCAAGAGATCTTATGTCAAC+TGG | 0.419614 | 3_3:-65880087 | Msa0465470:CDS |
GGATGATGCAATTCTAACTT+TGG | 0.420399 | 3_3:-65878295 | Msa0465470:CDS |
AAGCGTTGGTCCTAATTTCC+AGG | 0.424656 | 3_3:-65880757 | Msa0465470:CDS |
TCCTCCTGCTAAAGCTCCTC+TGG | 0.425124 | 3_3:-65880274 | Msa0465470:CDS |
CTCAATCGAACGCTCAAGAA+TGG | 0.425249 | 3_3:+65879912 | None:intergenic |
GGTCCTAATTTCCAGGATGA+TGG | 0.425860 | 3_3:-65880750 | Msa0465470:CDS |
TGTTTGAGAAGTTTGGTAAT+GGG | 0.426594 | 3_3:-65880017 | Msa0465470:CDS |
CTGTTTGAGAAGTTTGGTAA+TGG | 0.428608 | 3_3:-65880018 | Msa0465470:CDS |
CGACAAGTTTCACCAACTCT+TGG | 0.428964 | 3_3:+65879730 | None:intergenic |
TTTATCTGATGATAAGAAGT+TGG | 0.431998 | 3_3:-65880484 | Msa0465470:CDS |
TCAATAATGTTCTACACTGC+TGG | 0.436270 | 3_3:-65879790 | Msa0465470:CDS |
TGTGCAGCGTTATGCCTTAA+GGG | 0.442956 | 3_3:-65878939 | Msa0465470:CDS |
TAACAGGACAGGGAAGATAA+AGG | 0.443611 | 3_3:-65879317 | Msa0465470:CDS |
GTCAATGAATGAGGTTGATC+AGG | 0.448692 | 3_3:-65879185 | Msa0465470:CDS |
TAATTCTATAGCTTCCCTTA+AGG | 0.449230 | 3_3:+65878925 | None:intergenic |
CTTGTCATCAAGGCCTGATA+AGG | 0.452876 | 3_3:-65878105 | Msa0465470:exon |
CGCAGCAATATATTGCAGCC+TGG | 0.453642 | 3_3:-65879956 | Msa0465470:CDS |
GAAGAGGAGGTGGAGGTGGA+GGG | 0.453852 | 3_3:-65880561 | Msa0465470:CDS |
CATATATGAAACGAAACAAA+GGG | 0.454124 | 3_3:+65877820 | None:intergenic |
GATAATGGAAGAGGAGGTGG+AGG | 0.458491 | 3_3:-65880568 | Msa0465470:CDS |
TGGAGTTAAACTTTCCTTAG+TGG | 0.459596 | 3_3:+65880821 | None:intergenic |
GCAGGCACGTACGACGCAAT+TGG | 0.460085 | 3_3:-65878824 | Msa0465470:CDS |
TCGGAATTGCACCATTTGGT+TGG | 0.461069 | 3_3:-65880612 | Msa0465470:CDS |
TATATACTCCAAGCGTTTCA+GGG | 0.461186 | 3_3:+65878855 | None:intergenic |
TTTAAACAACCTTGTCATCA+AGG | 0.463538 | 3_3:-65878115 | Msa0465470:CDS |
GGTCTTATATGTGAAACAAA+GGG | 0.464250 | 3_3:-65879574 | Msa0465470:CDS |
GACAAGTTTCACCAACTCTT+GGG | 0.466081 | 3_3:+65879731 | None:intergenic |
TCCCCACTAGAACTCTCTCC+TGG | 0.466231 | 3_3:+65880528 | None:intergenic |
GGGGTTATGTATTACATGTT+GGG | 0.468336 | 3_3:-65879076 | Msa0465470:CDS |
CAAACCACTGAATTCAAGGT+TGG | 0.471026 | 3_3:-65880337 | Msa0465470:CDS |
TCATCACAAAGAATGTTCAT+TGG | 0.472722 | 3_3:+65881306 | None:intergenic |
GGAAGCTATAGAATTATTTG+AGG | 0.473262 | 3_3:-65878918 | Msa0465470:CDS |
TGATGATAAGAAGTTGGATA+TGG | 0.475057 | 3_3:-65880478 | Msa0465470:CDS |
GTCTCCAAGTTGCATGTGAC+CGG | 0.476378 | 3_3:+65879843 | None:intergenic |
CTATTGAAGAAGCTGCTGAT+AGG | 0.478081 | 3_3:-65879606 | Msa0465470:CDS |
TGGAGACACCTATGCTATGT+TGG | 0.481996 | 3_3:-65879827 | Msa0465470:CDS |
CACATAACCAATTCCAAACT+CGG | 0.483673 | 3_3:+65879991 | None:intergenic |
TGATGAGTCTAGAATTGATT+CGG | 0.484230 | 3_3:-65880631 | Msa0465470:CDS |
AGCATGGCAATGGTTGCAAA+TGG | 0.484872 | 3_3:-65879514 | Msa0465470:CDS |
CAGCCTCGTCATATCGAGAC+AGG | 0.487359 | 3_3:+65879437 | None:intergenic |
GGGGAAACATCTTCTGGAAT+GGG | 0.488806 | 3_3:-65880510 | Msa0465470:CDS |
CAAGTTACTGCAGAAGGCAT+TGG | 0.489151 | 3_3:-65879158 | Msa0465470:CDS |
GGAGCTGGAGATAATGGAAG+AGG | 0.489221 | 3_3:-65880577 | Msa0465470:CDS |
GCTCAACAACCCCATCATCC+TGG | 0.489936 | 3_3:+65880739 | None:intergenic |
ATTAAGAGCAATACCAAAGA+AGG | 0.492243 | 3_3:+65878979 | None:intergenic |
CAGCAGCTTCTTCAATAGAT+GGG | 0.492737 | 3_3:+65879611 | None:intergenic |
ACAAACGGGGTTCATGGCGA+TGG | 0.494013 | 3_3:-65880876 | Msa0465470:CDS |
GGTATTGCTCTTAATCAACT+GGG | 0.495438 | 3_3:-65878971 | Msa0465470:CDS |
AGCAGAGGAGCTCTGTCAAA+TGG | 0.496719 | 3_3:-65879665 | Msa0465470:CDS |
CAAGAGTTGGTGAAACTTGT+CGG | 0.496966 | 3_3:-65879729 | Msa0465470:CDS |
CCGGTGATTGAGATTCAATC+TGG | 0.498243 | 3_3:-65880426 | Msa0465470:CDS |
CTTATCAGGCCTTGATGACA+AGG | 0.498399 | 3_3:+65878106 | None:intergenic |
GGAGTTAAACTTTCCTTAGT+GGG | 0.499590 | 3_3:+65880822 | None:intergenic |
ATGCCGGGAATTGTTACAAA+CGG | 0.499833 | 3_3:-65880891 | Msa0465470:CDS |
CCAAGCGTTTCAGGGTGATA+AGG | 0.500209 | 3_3:+65878863 | None:intergenic |
TGGGGAAACATCTTCTGGAA+TGG | 0.500676 | 3_3:-65880511 | Msa0465470:CDS |
TTTGCCGGTCACATGCAACT+TGG | 0.500974 | 3_3:-65879847 | Msa0465470:CDS |
AGACCGCTAGCAATCTCCTC+TGG | 0.501919 | 3_3:+65879232 | None:intergenic |
TGTGGACTCATTGAACTCCT+TGG | 0.504396 | 3_3:+65880789 | None:intergenic |
GGAATTGCACCATTTGGTTG+GGG | 0.505497 | 3_3:-65880610 | Msa0465470:CDS |
CAAACGGGGTTCATGGCGAT+GGG | 0.505611 | 3_3:-65880875 | Msa0465470:CDS |
ACAAAGACCGACCCTACTGC+TGG | 0.507046 | 3_3:+65879358 | None:intergenic |
TTTCTCCCAAAATATGCCTC+TGG | 0.508008 | 3_3:+65879758 | None:intergenic |
TCAATCGAACGCTCAAGAAT+GGG | 0.508874 | 3_3:+65879913 | None:intergenic |
TTTGACAATTACATATATGT+TGG | 0.510684 | 3_3:-65877759 | Msa0465470:three_prime_UTR |
AAAATGGAATCATTGAAAAG+TGG | 0.511725 | 3_3:-65877954 | Msa0465470:three_prime_UTR |
GCATCTGTTGACTGCAGCAT+TGG | 0.511790 | 3_3:-65879475 | Msa0465470:CDS |
GGAGACACCTATGCTATGTT+GGG | 0.514722 | 3_3:-65879826 | Msa0465470:CDS |
TATTGTCTATTAACACTGTC+GGG | 0.516937 | 3_3:+65878006 | None:intergenic |
CTATTGTTCCTTGCTGACCA+GGG | 0.516960 | 3_3:+65879119 | None:intergenic |
GCTGACTTGTATAACAGGAC+AGG | 0.521984 | 3_3:-65879328 | Msa0465470:CDS |
ATATATGAGAATCCAATGCC+TGG | 0.522080 | 3_3:-65879262 | Msa0465470:CDS |
TCAATCTGGTAGTAAAAGTC+CGG | 0.522430 | 3_3:-65880412 | Msa0465470:CDS |
TCAATCTGGTAGTAAAAGTC+CGG | 0.522430 | 3_3:-65880445 | Msa0465470:CDS |
AAACCACTGAATTCAAGGTT+GGG | 0.523272 | 3_3:-65880336 | Msa0465470:CDS |
GGAGAGAATCATCCAGCAGT+AGG | 0.523946 | 3_3:-65879370 | Msa0465470:CDS |
ATGGTGGCTGAGATTCAATC+TGG | 0.526317 | 3_3:-65880459 | Msa0465470:CDS |
GAATTCGAAGCAGAAAAGTC+AGG | 0.526447 | 3_3:-65878173 | Msa0465470:CDS |
TCCTAATTTCCAGGATGATG+GGG | 0.527955 | 3_3:-65880748 | Msa0465470:CDS |
AGTGATTTGTTAAAGGAAGC+CGG | 0.532534 | 3_3:-65878198 | Msa0465470:CDS |
CCTTATCACCCTGAAACGCT+TGG | 0.533024 | 3_3:-65878863 | Msa0465470:CDS |
ATCTCCTCTGGAGTAACTCC+AGG | 0.533475 | 3_3:+65879244 | None:intergenic |
ACGATCTAGTAGTAAAAGTC+CGG | 0.534457 | 3_3:-65880379 | Msa0465470:CDS |
AAATGGCCAAGAAGCGGAAG+TGG | 0.534737 | 3_3:-65879497 | Msa0465470:CDS |
TGTGAACAATTCTCCCACTA+AGG | 0.536500 | 3_3:-65880835 | Msa0465470:CDS |
AGCTGCTGATAGGAGGCTCA+TGG | 0.537279 | 3_3:-65879596 | Msa0465470:CDS |
TCTGAGAGAATTAAAGATGC+CGG | 0.537446 | 3_3:-65880907 | Msa0465470:CDS |
GGTCAGCAAGGAACAATAGC+AGG | 0.538063 | 3_3:-65879115 | Msa0465470:CDS |
ATATTGTCTATTAACACTGT+CGG | 0.538572 | 3_3:+65878005 | None:intergenic |
CTGAGAGAATTAAAGATGCC+GGG | 0.540648 | 3_3:-65880906 | Msa0465470:CDS |
TCTGGAGTAACTCCAGGCAT+TGG | 0.542481 | 3_3:+65879250 | None:intergenic |
GGGTCTTATATGTGAAACAA+AGG | 0.545385 | 3_3:-65879575 | Msa0465470:CDS |
AATAGCAGGAATCGAAGCTC+AGG | 0.546276 | 3_3:-65879101 | Msa0465470:CDS |
GGCACTCAAGTTACTGCAGA+AGG | 0.552539 | 3_3:-65879164 | Msa0465470:CDS |
GAGCCCAACCTTGAATTCAG+TGG | 0.557395 | 3_3:+65880333 | None:intergenic |
GGAGCACGTTGTTAGTATGA+GGG | 0.558173 | 3_3:-65878274 | Msa0465470:CDS |
CATTCATAGAGAAAATAGTT+CGG | 0.559898 | 3_3:-65879635 | Msa0465470:CDS |
AGGCCAGGAGAGAGTTCTAG+TGG | 0.560737 | 3_3:-65880531 | Msa0465470:CDS |
TCATATATGAAACGAAACAA+AGG | 0.563522 | 3_3:+65877819 | None:intergenic |
CTAGATCGTGTCTTAACCAC+CGG | 0.564205 | 3_3:+65880393 | None:intergenic |
TCATAAAGCTGCTCGATCGA+AGG | 0.567443 | 3_3:+65880717 | None:intergenic |
GCTGGAGATAATGGAAGAGG+AGG | 0.567552 | 3_3:-65880574 | Msa0465470:CDS |
TGATCATTCTTTCTCTCCAG+AGG | 0.571551 | 3_3:+65880258 | None:intergenic |
GGAGAAACAGACCCAAGAGT+TGG | 0.572030 | 3_3:-65879742 | Msa0465470:CDS |
GCAGCAATATATTGCAGCCT+GGG | 0.572631 | 3_3:-65879955 | Msa0465470:CDS |
TTGAAGAAGCTGCTGATAGG+AGG | 0.574364 | 3_3:-65879603 | Msa0465470:CDS |
GAGAGAATCATCCAGCAGTA+GGG | 0.578129 | 3_3:-65879369 | Msa0465470:CDS |
AATGATGCCCCTGGTCAGCA+AGG | 0.578324 | 3_3:-65879127 | Msa0465470:CDS |
GAGATATATAATGATGCCCC+TGG | 0.582463 | 3_3:-65879136 | Msa0465470:CDS |
CCAGATTGAATCTCAATCAC+CGG | 0.584520 | 3_3:+65880426 | None:intergenic |
TATTGTTCCTTGCTGACCAG+GGG | 0.586144 | 3_3:+65879120 | None:intergenic |
TATCTATGAGTCAATGAATG+AGG | 0.586376 | 3_3:-65879194 | Msa0465470:CDS |
GAATTGCACCATTTGGTTGG+GGG | 0.586590 | 3_3:-65880609 | Msa0465470:CDS |
ACATTATTGAATTCTCAAGC+TGG | 0.587320 | 3_3:+65879803 | None:intergenic |
TTTGCAATTTAATGAAGCAG+AGG | 0.589536 | 3_3:-65879680 | Msa0465470:CDS |
TCCGCACAAAGCTCTTGAGT+TGG | 0.592177 | 3_3:-65880058 | Msa0465470:CDS |
GATCCAAAACTTTGTCTCGA+GGG | 0.596211 | 3_3:+65880660 | None:intergenic |
TAACTCCAATCAAGTCTCCA+AGG | 0.600870 | 3_3:-65880806 | Msa0465470:CDS |
GGCCAGGAGAGAGTTCTAGT+GGG | 0.601609 | 3_3:-65880530 | Msa0465470:CDS |
AGCAGGAATCGAAGCTCAGG+TGG | 0.603399 | 3_3:-65879098 | Msa0465470:CDS |
GACGAGTGTTATACTTAATG+GGG | 0.604411 | 3_3:-65877978 | Msa0465470:three_prime_UTR |
GTATGAGGGAGGAAAAGCTC+GGG | 0.605021 | 3_3:-65878260 | Msa0465470:CDS |
GTATTGCTCTTAATCAACTG+GGG | 0.605860 | 3_3:-65878970 | Msa0465470:CDS |
GCACGTACGACGCAATTGGA+AGG | 0.606386 | 3_3:-65878820 | Msa0465470:intron |
GCTGCTGATAGGAGGCTCAT+GGG | 0.606688 | 3_3:-65879595 | Msa0465470:CDS |
AGGAATCGAAGCTCAGGTGG+GGG | 0.609143 | 3_3:-65879095 | Msa0465470:CDS |
GCAGGAATCGAAGCTCAGGT+GGG | 0.614855 | 3_3:-65879097 | Msa0465470:CDS |
AGATCCAAAACTTTGTCTCG+AGG | 0.615616 | 3_3:+65880659 | None:intergenic |
CCACAGAGACGTCAAAGCGT+TGG | 0.622035 | 3_3:-65880771 | Msa0465470:CDS |
ACGTGGATGATGAAAAGAGA+AGG | 0.622587 | 3_3:-65878224 | Msa0465470:CDS |
CTGACTTGTATAACAGGACA+GGG | 0.625190 | 3_3:-65879327 | Msa0465470:CDS |
GGTTGCAAATGGCCAAGAAG+CGG | 0.627233 | 3_3:-65879503 | Msa0465470:CDS |
AAGCTGGCCCAACATAGCAT+AGG | 0.627553 | 3_3:+65879819 | None:intergenic |
TTGCCATGCTGGCTAAAACA+AGG | 0.628402 | 3_3:+65879527 | None:intergenic |
CAGGAATCGAAGCTCAGGTG+GGG | 0.630903 | 3_3:-65879096 | Msa0465470:CDS |
TCCAGAGGAGCTTTAGCAGG+AGG | 0.631409 | 3_3:+65880273 | None:intergenic |
AGCAGCTTCTTCAATAGATG+GGG | 0.635291 | 3_3:+65879612 | None:intergenic |
AGTATGAGGGAGGAAAAGCT+CGG | 0.639421 | 3_3:-65878261 | Msa0465470:CDS |
GATTGAGATTCCTGATATCG+GGG | 0.642295 | 3_3:-65879896 | Msa0465470:CDS |
GAATCATCCAGCAGTAGGGT+CGG | 0.642771 | 3_3:-65879365 | Msa0465470:CDS |
TTGCCTCACTATATCGACCC+AGG | 0.644043 | 3_3:+65879938 | None:intergenic |
TATATGAAACGAAACAAAGG+GGG | 0.644259 | 3_3:+65877822 | None:intergenic |
CCAACGCTTTGACGTCTCTG+TGG | 0.647529 | 3_3:+65880771 | None:intergenic |
ATCTGGTAGTAAAAGTCCGG+TGG | 0.648715 | 3_3:-65880409 | Msa0465470:CDS |
ATTGACACTGACTTTCCCAA+AGG | 0.649299 | 3_3:+65880180 | None:intergenic |
TGATAAGAAGTTGGATATGG+TGG | 0.651245 | 3_3:-65880475 | Msa0465470:CDS |
AAACGGGGTTCATGGCGATG+GGG | 0.651726 | 3_3:-65880874 | Msa0465470:CDS |
CAGCCTGGGTCGATATAGTG+AGG | 0.655422 | 3_3:-65879941 | Msa0465470:CDS |
GCCAACTCAAGAGCTTTGTG+CGG | 0.657377 | 3_3:+65880057 | None:intergenic |
GTCTTATATGTGAAACAAAG+GGG | 0.658004 | 3_3:-65879573 | Msa0465470:CDS |
GGCATCTTTAATTCTCTCAG+AGG | 0.663417 | 3_3:+65880909 | None:intergenic |
GCCAGGAGAGAGTTCTAGTG+GGG | 0.664478 | 3_3:-65880529 | Msa0465470:CDS |
ATCCCTGTCTCGATATGACG+AGG | 0.670357 | 3_3:-65879440 | Msa0465470:CDS |
ATAAAAGTAGAAGAAGCCAA+AGG | 0.672919 | 3_3:-65881273 | Msa0465470:intron |
TCACCAAGATCAAAACCCAA+AGG | 0.673652 | 3_3:-65880303 | Msa0465470:CDS |
GCACGTTGTTAGTATGAGGG+AGG | 0.676380 | 3_3:-65878271 | Msa0465470:CDS |
CAGGCTGCAATATATTGCTG+CGG | 0.679348 | 3_3:+65879957 | None:intergenic |
ATATATGAAACGAAACAAAG+GGG | 0.685382 | 3_3:+65877821 | None:intergenic |
GCCGGGAATTGTTACAAACG+GGG | 0.687272 | 3_3:-65880889 | Msa0465470:CDS |
TAAGGCATAACGCTGCACAC+AGG | 0.688937 | 3_3:+65878943 | None:intergenic |
CCTTTGAGAAAACAAACTAG+AGG | 0.692430 | 3_3:-65880234 | Msa0465470:CDS |
AGCCTCGTCATATCGAGACA+GGG | 0.693208 | 3_3:+65879438 | None:intergenic |
CGGGACAGCGAATCCCGACG+TGG | 0.696066 | 3_3:-65878241 | Msa0465470:CDS |
ACTCCAGAGGAGATTGCTAG+CGG | 0.697838 | 3_3:-65879235 | Msa0465470:CDS |
ATATGAAACGAAACAAAGGG+GGG | 0.718488 | 3_3:+65877823 | None:intergenic |
AATGCCTGGAGTTACTCCAG+AGG | 0.727468 | 3_3:-65879248 | Msa0465470:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAGTTAAATTCATTATTT+TGG | - | chr3_3:65880497-65880516 | Msa0465470:CDS | 10.0% |
!!! | AACTTTTACTAATAAAAAGA+AGG | + | chr3_3:65880484-65880503 | None:intergenic | 15.0% |
!!! | GCGAAAAAAAATTGTATTTT+TGG | + | chr3_3:65878024-65878043 | None:intergenic | 20.0% |
!! | AAAGAATCAAGTTTCTTTAA+AGG | + | chr3_3:65880960-65880979 | None:intergenic | 20.0% |
!! | ACATTGTGAAAAAAAATGAA+GGG | - | chr3_3:65880996-65881015 | Msa0465470:intron | 20.0% |
!! | ATGTTGTACACAAAAATAAA+GGG | + | chr3_3:65881189-65881208 | None:intergenic | 20.0% |
!! | AATGTTGTACACAAAAATAA+AGG | + | chr3_3:65881190-65881209 | None:intergenic | 20.0% |
!! | TTTGACAATTACATATATGT+TGG | - | chr3_3:65881276-65881295 | Msa0465470:CDS | 20.0% |
! | ACTTTGACTATTGCAAATTA+TGG | - | chr3_3:65877794-65877813 | Msa0465470:three_prime_UTR | 25.0% |
! | TTTATCTGATGATAAGAAGT+TGG | - | chr3_3:65878551-65878570 | Msa0465470:intron | 25.0% |
! | AATTCAAAGAATTCTCCTTT+GGG | - | chr3_3:65878840-65878859 | Msa0465470:CDS | 25.0% |
! | CATTCATAGAGAAAATAGTT+CGG | - | chr3_3:65879400-65879419 | Msa0465470:CDS | 25.0% |
! | ACAATACCTTGGTAAATTAA+AGG | + | chr3_3:65880318-65880337 | None:intergenic | 25.0% |
! | ATGTGAAATGATAACTGATT+CGG | - | chr3_3:65880409-65880428 | Msa0465470:CDS | 25.0% |
! | CTTGGATAATCATAATCTAA+AGG | + | chr3_3:65880661-65880680 | None:intergenic | 25.0% |
! | GATTATGATTATCCAAGATA+TGG | - | chr3_3:65880664-65880683 | Msa0465470:CDS | 25.0% |
! | CACATTGTGAAAAAAAATGA+AGG | - | chr3_3:65880995-65881014 | Msa0465470:intron | 25.0% |
! | ATATTGTCTATTAACACTGT+CGG | + | chr3_3:65881033-65881052 | None:intergenic | 25.0% |
! | TTATACTTAATGGGGTAAAA+TGG | - | chr3_3:65881065-65881084 | Msa0465470:intron | 25.0% |
! | AAAATGGAATCATTGAAAAG+TGG | - | chr3_3:65881081-65881100 | Msa0465470:intron | 25.0% |
! | ATATATGAAACGAAACAAAG+GGG | + | chr3_3:65881217-65881236 | None:intergenic | 25.0% |
! | CATATATGAAACGAAACAAA+GGG | + | chr3_3:65881218-65881237 | None:intergenic | 25.0% |
! | TCATATATGAAACGAAACAA+AGG | + | chr3_3:65881219-65881238 | None:intergenic | 25.0% |
ATAAAAGTAGAAGAAGCCAA+AGG | - | chr3_3:65877762-65877781 | Msa0465470:three_prime_UTR | 30.0% | |
! | TCAAAGTTTTTCTTCACCTT+TGG | + | chr3_3:65877781-65877800 | None:intergenic | 30.0% |
ACAGACAACATTTGATCAAA+TGG | + | chr3_3:65877933-65877952 | None:intergenic | 30.0% | |
!! | TGTTTGATATTTGTTGTCAC+AGG | - | chr3_3:65878093-65878112 | Msa0465470:exon | 30.0% |
! | TGATGAGTCTAGAATTGATT+CGG | - | chr3_3:65878404-65878423 | Msa0465470:intron | 30.0% |
TGATGATAAGAAGTTGGATA+TGG | - | chr3_3:65878557-65878576 | Msa0465470:intron | 30.0% | |
!!! | ACAATTTTTTCTGAGGAAAC+CGG | + | chr3_3:65878678-65878697 | None:intergenic | 30.0% |
!!! | TGGTTTGACAATTTTTTCTG+AGG | + | chr3_3:65878685-65878704 | None:intergenic | 30.0% |
AAACAAACTAGAGGAGTTAA+TGG | - | chr3_3:65878810-65878829 | Msa0465470:intron | 30.0% | |
GAATTCAAAGAATTCTCCTT+TGG | - | chr3_3:65878839-65878858 | Msa0465470:CDS | 30.0% | |
CTTGCTTGCTTTAGTAATAT+CGG | + | chr3_3:65878933-65878952 | None:intergenic | 30.0% | |
ATGAAACTGTTTGAGAAGTT+TGG | - | chr3_3:65879011-65879030 | Msa0465470:CDS | 30.0% | |
! | TGTTTGAGAAGTTTGGTAAT+GGG | - | chr3_3:65879018-65879037 | Msa0465470:CDS | 30.0% |
ACATTATTGAATTCTCAAGC+TGG | + | chr3_3:65879235-65879254 | None:intergenic | 30.0% | |
TTTGCAATTTAATGAAGCAG+AGG | - | chr3_3:65879355-65879374 | Msa0465470:CDS | 30.0% | |
! | GGTCTTATATGTGAAACAAA+GGG | - | chr3_3:65879461-65879480 | Msa0465470:CDS | 30.0% |
GTCTTATATGTGAAACAAAG+GGG | - | chr3_3:65879462-65879481 | Msa0465470:CDS | 30.0% | |
TATCTATGAGTCAATGAATG+AGG | - | chr3_3:65879841-65879860 | Msa0465470:CDS | 30.0% | |
ATTAAGAGCAATACCAAAGA+AGG | + | chr3_3:65880059-65880078 | None:intergenic | 30.0% | |
TAATTCTATAGCTTCCCTTA+AGG | + | chr3_3:65880113-65880132 | None:intergenic | 30.0% | |
GGAAGCTATAGAATTATTTG+AGG | - | chr3_3:65880117-65880136 | Msa0465470:CDS | 30.0% | |
!! | AAAAGATTTGCTAGAAGAAG+CGG | + | chr3_3:65880271-65880290 | None:intergenic | 30.0% |
AAAGATTTCATAGTTCCACA+AGG | + | chr3_3:65880612-65880631 | None:intergenic | 30.0% | |
TGATTATCCAAGATATGGTT+TGG | - | chr3_3:65880669-65880688 | Msa0465470:CDS | 30.0% | |
!! | AAGGTTGAGTGATTTGTTAA+AGG | - | chr3_3:65880830-65880849 | Msa0465470:CDS | 30.0% |
TTTAAACAACCTTGTCATCA+AGG | - | chr3_3:65880920-65880939 | Msa0465470:CDS | 30.0% | |
! | CTTTAAAGGAAATCCTTATC+AGG | + | chr3_3:65880946-65880965 | None:intergenic | 30.0% |
TTGATTCTTTGATGCTTTAC+AGG | - | chr3_3:65880970-65880989 | Msa0465470:intron | 30.0% | |
TGTGAAAAAAAATGAAGGGA+TGG | - | chr3_3:65881000-65881019 | Msa0465470:intron | 30.0% | |
GTGAAAAAAAATGAAGGGAT+GGG | - | chr3_3:65881001-65881020 | Msa0465470:intron | 30.0% | |
TATTGTCTATTAACACTGTC+GGG | + | chr3_3:65881032-65881051 | None:intergenic | 30.0% | |
TTGACGAGTGTTATACTTAA+TGG | - | chr3_3:65881055-65881074 | Msa0465470:intron | 30.0% | |
TGACGAGTGTTATACTTAAT+GGG | - | chr3_3:65881056-65881075 | Msa0465470:intron | 30.0% | |
TATATGAAACGAAACAAAGG+GGG | + | chr3_3:65881216-65881235 | None:intergenic | 30.0% | |
!!! | TTTTTTCGCCTTCTCTTTGT+TGG | - | chr3_3:65878035-65878054 | Msa0465470:three_prime_UTR | 35.0% |
!! | ATTTGTTGTCACAGGTATTC+TGG | - | chr3_3:65878101-65878120 | Msa0465470:exon | 35.0% |
TCTGAGAGAATTAAAGATGC+CGG | - | chr3_3:65878128-65878147 | Msa0465470:CDS | 35.0% | |
GGAGTTAAACTTTCCTTAGT+GGG | + | chr3_3:65878216-65878235 | None:intergenic | 35.0% | |
TGGAGTTAAACTTTCCTTAG+TGG | + | chr3_3:65878217-65878236 | None:intergenic | 35.0% | |
!!! | AGACAAAGTTTTGGATCTGA+CGG | - | chr3_3:65878381-65878400 | Msa0465470:intron | 35.0% |
TGATAAGAAGTTGGATATGG+TGG | - | chr3_3:65878560-65878579 | Msa0465470:intron | 35.0% | |
TCAATCTGGTAGTAAAAGTC+CGG | - | chr3_3:65878590-65878609 | Msa0465470:intron | 35.0% | |
TCAATCTGGTAGTAAAAGTC+CGG | - | chr3_3:65878590-65878609 | Msa0465470:intron | 35.0% | |
ACGATCTAGTAGTAAAAGTC+CGG | - | chr3_3:65878656-65878675 | Msa0465470:intron | 35.0% | |
TTGTCAAACCACTGAATTCA+AGG | - | chr3_3:65878694-65878713 | Msa0465470:intron | 35.0% | |
AAACCACTGAATTCAAGGTT+GGG | - | chr3_3:65878699-65878718 | Msa0465470:intron | 35.0% | |
!! | TTTCCTTTGGGTTTTGATCT+TGG | + | chr3_3:65878738-65878757 | None:intergenic | 35.0% |
!!! | CCTCTAGTTTGTTTTCTCAA+AGG | + | chr3_3:65878804-65878823 | None:intergenic | 35.0% |
! | CCTTTGAGAAAACAAACTAG+AGG | - | chr3_3:65878801-65878820 | Msa0465470:intron | 35.0% |
CTGTTTGAGAAGTTTGGTAA+TGG | - | chr3_3:65879017-65879036 | Msa0465470:CDS | 35.0% | |
CACATAACCAATTCCAAACT+CGG | + | chr3_3:65879047-65879066 | None:intergenic | 35.0% | |
TCGATTGAGATTCCTGATAT+CGG | - | chr3_3:65879137-65879156 | Msa0465470:CDS | 35.0% | |
TCAATAATGTTCTACACTGC+TGG | - | chr3_3:65879245-65879264 | Msa0465470:CDS | 35.0% | |
! | GGGTCTTATATGTGAAACAA+AGG | - | chr3_3:65879460-65879479 | Msa0465470:CDS | 35.0% |
ATATATGAGAATCCAATGCC+TGG | - | chr3_3:65879773-65879792 | Msa0465470:CDS | 35.0% | |
GGGGTTATGTATTACATGTT+GGG | - | chr3_3:65879959-65879978 | Msa0465470:CDS | 35.0% | |
ATCACAAAACTTCGTGCTAT+TGG | - | chr3_3:65880019-65880038 | Msa0465470:CDS | 35.0% | |
GAGAAGAAATCATCCTTCTT+TGG | - | chr3_3:65880043-65880062 | Msa0465470:CDS | 35.0% | |
TGGTATTGCTCTTAATCAAC+TGG | - | chr3_3:65880063-65880082 | Msa0465470:CDS | 35.0% | |
GGTATTGCTCTTAATCAACT+GGG | - | chr3_3:65880064-65880083 | Msa0465470:CDS | 35.0% | |
GTATTGCTCTTAATCAACTG+GGG | - | chr3_3:65880065-65880084 | Msa0465470:CDS | 35.0% | |
!!! | AGTGTTTTGGAACATGAGTT+GGG | - | chr3_3:65880148-65880167 | Msa0465470:CDS | 35.0% |
TATATACTCCAAGCGTTTCA+GGG | + | chr3_3:65880183-65880202 | None:intergenic | 35.0% | |
GGAGTATATAGTAATCTTGC+AGG | - | chr3_3:65880193-65880212 | Msa0465470:CDS | 35.0% | |
! | TCAGCACCTTTAATTTACCA+AGG | - | chr3_3:65880309-65880328 | Msa0465470:CDS | 35.0% |
CAGTTATCATTTCACATGAG+TGG | + | chr3_3:65880406-65880425 | None:intergenic | 35.0% | |
! | GAAGTTCTTTTCTCCTTACA+GGG | - | chr3_3:65880696-65880715 | Msa0465470:CDS | 35.0% |
ATAGAAGATCAAACCCTGTA+AGG | + | chr3_3:65880712-65880731 | None:intergenic | 35.0% | |
AGGGTTTGATCTTCTATTTC+AGG | - | chr3_3:65880715-65880734 | Msa0465470:CDS | 35.0% | |
TTTGATCTTCTATTTCAGGC+TGG | - | chr3_3:65880719-65880738 | Msa0465470:CDS | 35.0% | |
GGATGATGCAATTCTAACTT+TGG | - | chr3_3:65880740-65880759 | Msa0465470:CDS | 35.0% | |
!! | AGTGATTTGTTAAAGGAAGC+CGG | - | chr3_3:65880837-65880856 | Msa0465470:CDS | 35.0% |
! | TTTTCTGCTTCGAATTCTAC+CGG | + | chr3_3:65880859-65880878 | None:intergenic | 35.0% |
! | TCACTAGAGAACCTTTTTGA+CGG | - | chr3_3:65880885-65880904 | Msa0465470:CDS | 35.0% |
GACGAGTGTTATACTTAATG+GGG | - | chr3_3:65881057-65881076 | Msa0465470:intron | 35.0% | |
ATATGAAACGAAACAAAGGG+GGG | + | chr3_3:65881215-65881234 | None:intergenic | 35.0% | |
! | CTGTCTGAAACTCTTTGATA+TGG | - | chr3_3:65881246-65881265 | Msa0465470:intron | 35.0% |
GGCATCTTTAATTCTCTCAG+AGG | + | chr3_3:65878129-65878148 | None:intergenic | 40.0% | |
CTGAGAGAATTAAAGATGCC+GGG | - | chr3_3:65878129-65878148 | Msa0465470:CDS | 40.0% | |
ATGCCGGGAATTGTTACAAA+CGG | - | chr3_3:65878144-65878163 | Msa0465470:CDS | 40.0% | |
ATTGTTACAAACGGGGTTCA+TGG | - | chr3_3:65878153-65878172 | Msa0465470:CDS | 40.0% | |
TGTGAACAATTCTCCCACTA+AGG | - | chr3_3:65878200-65878219 | Msa0465470:CDS | 40.0% | |
TAACTCCAATCAAGTCTCCA+AGG | - | chr3_3:65878229-65878248 | Msa0465470:CDS | 40.0% | |
GTCCTAATTTCCAGGATGAT+GGG | - | chr3_3:65878286-65878305 | Msa0465470:CDS | 40.0% | |
TCCTAATTTCCAGGATGATG+GGG | - | chr3_3:65878287-65878306 | Msa0465470:CDS | 40.0% | |
GATCCAAAACTTTGTCTCGA+GGG | + | chr3_3:65878378-65878397 | None:intergenic | 40.0% | |
AGATCCAAAACTTTGTCTCG+AGG | + | chr3_3:65878379-65878398 | None:intergenic | 40.0% | |
! | TGATTCGGAATTGCACCATT+TGG | - | chr3_3:65878419-65878438 | Msa0465470:intron | 40.0% |
CCAGATTGAATCTCAATCAC+CGG | + | chr3_3:65878612-65878631 | None:intergenic | 40.0% | |
CAAACCACTGAATTCAAGGT+TGG | - | chr3_3:65878698-65878717 | Msa0465470:intron | 40.0% | |
TCACCAAGATCAAAACCCAA+AGG | - | chr3_3:65878732-65878751 | Msa0465470:intron | 40.0% | |
TGATCATTCTTTCTCTCCAG+AGG | + | chr3_3:65878780-65878799 | None:intergenic | 40.0% | |
!! | ATTGACACTGACTTTCCCAA+AGG | + | chr3_3:65878858-65878877 | None:intergenic | 40.0% |
AATGAGTCGCGTTGAGAATT+CGG | - | chr3_3:65878875-65878894 | Msa0465470:CDS | 40.0% | |
GCAAGAGATCTTATGTCAAC+TGG | - | chr3_3:65878948-65878967 | Msa0465470:CDS | 40.0% | |
TCAATCGAACGCTCAAGAAT+GGG | + | chr3_3:65879125-65879144 | None:intergenic | 40.0% | |
CGATTGAGATTCCTGATATC+GGG | - | chr3_3:65879138-65879157 | Msa0465470:CDS | 40.0% | |
GATTGAGATTCCTGATATCG+GGG | - | chr3_3:65879139-65879158 | Msa0465470:CDS | 40.0% | |
CATGCTCTTGCTAAATTTGC+CGG | - | chr3_3:65879173-65879192 | Msa0465470:CDS | 40.0% | |
!! | TGAAGTCCAGAGGCATATTT+TGG | - | chr3_3:65879271-65879290 | Msa0465470:CDS | 40.0% |
!! | GAAGTCCAGAGGCATATTTT+GGG | - | chr3_3:65879272-65879291 | Msa0465470:CDS | 40.0% |
TTTCTCCCAAAATATGCCTC+TGG | + | chr3_3:65879280-65879299 | None:intergenic | 40.0% | |
GACAAGTTTCACCAACTCTT+GGG | + | chr3_3:65879307-65879326 | None:intergenic | 40.0% | |
!! | CAAGAGTTGGTGAAACTTGT+CGG | - | chr3_3:65879306-65879325 | Msa0465470:CDS | 40.0% |
TGGTGAAACTTGTCGGTATT+TGG | - | chr3_3:65879313-65879332 | Msa0465470:CDS | 40.0% | |
AGCAGCTTCTTCAATAGATG+GGG | + | chr3_3:65879426-65879445 | None:intergenic | 40.0% | |
CAGCAGCTTCTTCAATAGAT+GGG | + | chr3_3:65879427-65879446 | None:intergenic | 40.0% | |
TCAGCAGCTTCTTCAATAGA+TGG | + | chr3_3:65879428-65879447 | None:intergenic | 40.0% | |
CTATTGAAGAAGCTGCTGAT+AGG | - | chr3_3:65879429-65879448 | Msa0465470:CDS | 40.0% | |
!! | GTTTGGCTGACTTGTATAAC+AGG | - | chr3_3:65879702-65879721 | Msa0465470:CDS | 40.0% |
! | CTGACTTGTATAACAGGACA+GGG | - | chr3_3:65879708-65879727 | Msa0465470:CDS | 40.0% |
TAACAGGACAGGGAAGATAA+AGG | - | chr3_3:65879718-65879737 | Msa0465470:CDS | 40.0% | |
! | GTCAATGAATGAGGTTGATC+AGG | - | chr3_3:65879850-65879869 | Msa0465470:CDS | 40.0% |
GAGATATATAATGATGCCCC+TGG | - | chr3_3:65879899-65879918 | Msa0465470:CDS | 40.0% | |
GGGGGTTATGTATTACATGT+TGG | - | chr3_3:65879958-65879977 | Msa0465470:CDS | 40.0% | |
!!! | TGAGGAAGCAAAGAGTGTTT+TGG | - | chr3_3:65880135-65880154 | Msa0465470:CDS | 40.0% |
!!! | GAGTGTTTTGGAACATGAGT+TGG | - | chr3_3:65880147-65880166 | Msa0465470:CDS | 40.0% |
!!! | GTGTTTTGGAACATGAGTTG+GGG | - | chr3_3:65880149-65880168 | Msa0465470:CDS | 40.0% |
CTATATACTCCAAGCGTTTC+AGG | + | chr3_3:65880184-65880203 | None:intergenic | 40.0% | |
!! | GATAACTGATTCGGCATTCA+TGG | - | chr3_3:65880418-65880437 | Msa0465470:CDS | 40.0% |
TTCTTGGGGTCTAGTATAAG+TGG | + | chr3_3:65880556-65880575 | None:intergenic | 40.0% | |
ATACTAGACCCCAAGAAAGA+AGG | - | chr3_3:65880559-65880578 | Msa0465470:CDS | 40.0% | |
TACTAGACCCCAAGAAAGAA+GGG | - | chr3_3:65880560-65880579 | Msa0465470:CDS | 40.0% | |
! | GGAGTTTGATTCACCTTTTG+AGG | - | chr3_3:65880586-65880605 | Msa0465470:CDS | 40.0% |
TTCGACACCAAACCATATCT+TGG | + | chr3_3:65880679-65880698 | None:intergenic | 40.0% | |
! | CGAAGTTCTTTTCTCCTTAC+AGG | - | chr3_3:65880695-65880714 | Msa0465470:CDS | 40.0% |
! | TCTCTTTTCATCATCCACGT+CGG | + | chr3_3:65880811-65880830 | None:intergenic | 40.0% |
ACGTGGATGATGAAAAGAGA+AGG | - | chr3_3:65880811-65880830 | Msa0465470:CDS | 40.0% | |
GAATTCGAAGCAGAAAAGTC+AGG | - | chr3_3:65880862-65880881 | Msa0465470:CDS | 40.0% | |
CCACAGATCCAACAAAGAGA+AGG | + | chr3_3:65878046-65878065 | None:intergenic | 45.0% | |
CCTTCTCTTTGTTGGATCTG+TGG | - | chr3_3:65878043-65878062 | Msa0465470:three_prime_UTR | 45.0% | |
TCTCTTTGTTGGATCTGTGG+TGG | - | chr3_3:65878046-65878065 | Msa0465470:three_prime_UTR | 45.0% | |
CTCTTTGTTGGATCTGTGGT+GGG | - | chr3_3:65878047-65878066 | Msa0465470:three_prime_UTR | 45.0% | |
TGCCGGGAATTGTTACAAAC+GGG | - | chr3_3:65878145-65878164 | Msa0465470:CDS | 45.0% | |
ACCCCGTTTGTAACAATTCC+CGG | + | chr3_3:65878150-65878169 | None:intergenic | 45.0% | |
GAACTCCTTGGAGACTTGAT+TGG | + | chr3_3:65878237-65878256 | None:intergenic | 45.0% | |
TGTGGACTCATTGAACTCCT+TGG | + | chr3_3:65878249-65878268 | None:intergenic | 45.0% | |
!! | AAGCGTTGGTCCTAATTTCC+AGG | - | chr3_3:65878278-65878297 | Msa0465470:CDS | 45.0% |
GGTCCTAATTTCCAGGATGA+TGG | - | chr3_3:65878285-65878304 | Msa0465470:CDS | 45.0% | |
ACCCCATCATCCTGGAAATT+AGG | + | chr3_3:65878291-65878310 | None:intergenic | 45.0% | |
TCATAAAGCTGCTCGATCGA+AGG | + | chr3_3:65878321-65878340 | None:intergenic | 45.0% | |
TCGGAATTGCACCATTTGGT+TGG | - | chr3_3:65878423-65878442 | Msa0465470:intron | 45.0% | |
CGGAATTGCACCATTTGGTT+GGG | - | chr3_3:65878424-65878443 | Msa0465470:intron | 45.0% | |
GGAATTGCACCATTTGGTTG+GGG | - | chr3_3:65878425-65878444 | Msa0465470:intron | 45.0% | |
GAATTGCACCATTTGGTTGG+GGG | - | chr3_3:65878426-65878445 | Msa0465470:intron | 45.0% | |
TCTAGTGGGGAAACATCTTC+TGG | - | chr3_3:65878519-65878538 | Msa0465470:intron | 45.0% | |
! | TGGGGAAACATCTTCTGGAA+TGG | - | chr3_3:65878524-65878543 | Msa0465470:intron | 45.0% |
!! | GGGGAAACATCTTCTGGAAT+GGG | - | chr3_3:65878525-65878544 | Msa0465470:intron | 45.0% |
ATGGTGGCTGAGATTCAATC+TGG | - | chr3_3:65878576-65878595 | Msa0465470:intron | 45.0% | |
CCGGTGATTGAGATTCAATC+TGG | - | chr3_3:65878609-65878628 | Msa0465470:intron | 45.0% | |
ATCTGGTAGTAAAAGTCCGG+TGG | - | chr3_3:65878593-65878612 | Msa0465470:intron | 45.0% | |
CTAGATCGTGTCTTAACCAC+CGG | + | chr3_3:65878645-65878664 | None:intergenic | 45.0% | |
!! | GCAGGAGGACTTTTTCCTTT+GGG | + | chr3_3:65878750-65878769 | None:intergenic | 45.0% |
!! | AGCAGGAGGACTTTTTCCTT+TGG | + | chr3_3:65878751-65878770 | None:intergenic | 45.0% |
CAGGCTGCAATATATTGCTG+CGG | + | chr3_3:65879081-65879100 | None:intergenic | 45.0% | |
GCAGCAATATATTGCAGCCT+GGG | - | chr3_3:65879080-65879099 | Msa0465470:CDS | 45.0% | |
CTCAATCGAACGCTCAAGAA+TGG | + | chr3_3:65879126-65879145 | None:intergenic | 45.0% | |
!! | TGTTGACTTTCCCCGATATC+AGG | + | chr3_3:65879152-65879171 | None:intergenic | 45.0% |
TGGAGACACCTATGCTATGT+TGG | - | chr3_3:65879208-65879227 | Msa0465470:CDS | 45.0% | |
GGAGACACCTATGCTATGTT+GGG | - | chr3_3:65879209-65879228 | Msa0465470:CDS | 45.0% | |
CGACAAGTTTCACCAACTCT+TGG | + | chr3_3:65879308-65879327 | None:intergenic | 45.0% | |
TTGAAGAAGCTGCTGATAGG+AGG | - | chr3_3:65879432-65879451 | Msa0465470:CDS | 45.0% | |
!!! | ACACCTTGTTTTAGCCAGCA+TGG | - | chr3_3:65879505-65879524 | Msa0465470:CDS | 45.0% |
! | TTGCCATGCTGGCTAAAACA+AGG | + | chr3_3:65879511-65879530 | None:intergenic | 45.0% |
!!! | TGTTTTAGCCAGCATGGCAA+TGG | - | chr3_3:65879511-65879530 | Msa0465470:CDS | 45.0% |
ATTTGCAACCATTGCCATGC+TGG | + | chr3_3:65879522-65879541 | None:intergenic | 45.0% | |
AGCATGGCAATGGTTGCAAA+TGG | - | chr3_3:65879521-65879540 | Msa0465470:CDS | 45.0% | |
!! | GCAGTTTTCAAGACCAGCAA+AGG | - | chr3_3:65879644-65879663 | Msa0465470:CDS | 45.0% |
TGGATGATTCTCTCCTTTGC+TGG | + | chr3_3:65879660-65879679 | None:intergenic | 45.0% | |
GAGAGAATCATCCAGCAGTA+GGG | - | chr3_3:65879666-65879685 | Msa0465470:CDS | 45.0% | |
!! | GCTGACTTGTATAACAGGAC+AGG | - | chr3_3:65879707-65879726 | Msa0465470:CDS | 45.0% |
! | CAAGTTACTGCAGAAGGCAT+TGG | - | chr3_3:65879877-65879896 | Msa0465470:CDS | 45.0% |
TATTGTTCCTTGCTGACCAG+GGG | + | chr3_3:65879918-65879937 | None:intergenic | 45.0% | |
CTATTGTTCCTTGCTGACCA+GGG | + | chr3_3:65879919-65879938 | None:intergenic | 45.0% | |
AATAGCAGGAATCGAAGCTC+AGG | - | chr3_3:65879934-65879953 | Msa0465470:CDS | 45.0% | |
TGTGCAGCGTTATGCCTTAA+GGG | - | chr3_3:65880096-65880115 | Msa0465470:CDS | 45.0% | |
GAAGAAGCGGAAACACAGAA+GGG | + | chr3_3:65880258-65880277 | None:intergenic | 45.0% | |
AGAAGAAGCGGAAACACAGA+AGG | + | chr3_3:65880259-65880278 | None:intergenic | 45.0% | |
!! | ACCAAGGTATTGTGTGAAGC+AGG | - | chr3_3:65880325-65880344 | Msa0465470:CDS | 45.0% |
TGGGGTCTAGTATAAGTGGT+TGG | + | chr3_3:65880552-65880571 | None:intergenic | 45.0% | |
!!! | ATTCACCTTTTGAGGCCTTG+TGG | - | chr3_3:65880594-65880613 | Msa0465470:CDS | 45.0% |
TAGTTCCACAAGGCCTCAAA+AGG | + | chr3_3:65880602-65880621 | None:intergenic | 45.0% | |
TGGAGCACGTTGTTAGTATG+AGG | - | chr3_3:65880760-65880779 | Msa0465470:CDS | 45.0% | |
GGAGCACGTTGTTAGTATGA+GGG | - | chr3_3:65880761-65880780 | Msa0465470:CDS | 45.0% | |
AGTATGAGGGAGGAAAAGCT+CGG | - | chr3_3:65880774-65880793 | Msa0465470:CDS | 45.0% | |
! | CTCTTTTCATCATCCACGTC+GGG | + | chr3_3:65880810-65880829 | None:intergenic | 45.0% |
! | CTTATCAGGCCTTGATGACA+AGG | + | chr3_3:65880932-65880951 | None:intergenic | 45.0% |
CTTGTCATCAAGGCCTGATA+AGG | - | chr3_3:65880930-65880949 | Msa0465470:intron | 45.0% | |
GCCGGGAATTGTTACAAACG+GGG | - | chr3_3:65878146-65878165 | Msa0465470:CDS | 50.0% | |
! | TCGCCCTCGAGACAAAGTTT+TGG | - | chr3_3:65878372-65878391 | Msa0465470:intron | 50.0% |
GATGAGGGAGCTGGAGATAA+TGG | - | chr3_3:65878452-65878471 | Msa0465470:intron | 50.0% | |
!! | GGAGCTGGAGATAATGGAAG+AGG | - | chr3_3:65878458-65878477 | Msa0465470:intron | 50.0% |
!! | GCTGGAGATAATGGAAGAGG+AGG | - | chr3_3:65878461-65878480 | Msa0465470:intron | 50.0% |
!! | GGAGATAATGGAAGAGGAGG+TGG | - | chr3_3:65878464-65878483 | Msa0465470:intron | 50.0% |
!! | GATAATGGAAGAGGAGGTGG+AGG | - | chr3_3:65878467-65878486 | Msa0465470:intron | 50.0% |
GAGCCCAACCTTGAATTCAG+TGG | + | chr3_3:65878705-65878724 | None:intergenic | 50.0% | |
! | AGTAATATCGGTGCTCGCTC+TGG | + | chr3_3:65878921-65878940 | None:intergenic | 50.0% |
TCCGCACAAAGCTCTTGAGT+TGG | - | chr3_3:65878977-65878996 | Msa0465470:CDS | 50.0% | |
! | GCCAACTCAAGAGCTTTGTG+CGG | + | chr3_3:65878981-65879000 | None:intergenic | 50.0% |
!! | TGGTAATGGGAAGCCGAGTT+TGG | - | chr3_3:65879031-65879050 | Msa0465470:CDS | 50.0% |
! | TGGGAAGCCGAGTTTGGAAT+TGG | - | chr3_3:65879037-65879056 | Msa0465470:CDS | 50.0% |
CGCAGCAATATATTGCAGCC+TGG | - | chr3_3:65879079-65879098 | Msa0465470:CDS | 50.0% | |
TTGCCTCACTATATCGACCC+AGG | + | chr3_3:65879100-65879119 | None:intergenic | 50.0% | |
TTTGCCGGTCACATGCAACT+TGG | - | chr3_3:65879188-65879207 | Msa0465470:CDS | 50.0% | |
GTCTCCAAGTTGCATGTGAC+CGG | + | chr3_3:65879195-65879214 | None:intergenic | 50.0% | |
AAGCTGGCCCAACATAGCAT+AGG | + | chr3_3:65879219-65879238 | None:intergenic | 50.0% | |
!!! | CTGCTGGTTTTGAAGTCCAG+AGG | - | chr3_3:65879261-65879280 | Msa0465470:CDS | 50.0% |
GGAGAAACAGACCCAAGAGT+TGG | - | chr3_3:65879293-65879312 | Msa0465470:CDS | 50.0% | |
AGCAGAGGAGCTCTGTCAAA+TGG | - | chr3_3:65879370-65879389 | Msa0465470:CDS | 50.0% | |
GGTTGCAAATGGCCAAGAAG+CGG | - | chr3_3:65879532-65879551 | Msa0465470:CDS | 50.0% | |
AAATGGCCAAGAAGCGGAAG+TGG | - | chr3_3:65879538-65879557 | Msa0465470:CDS | 50.0% | |
! | GCATCTGTTGACTGCAGCAT+TGG | - | chr3_3:65879560-65879579 | Msa0465470:CDS | 50.0% |
ATCCCTGTCTCGATATGACG+AGG | - | chr3_3:65879595-65879614 | Msa0465470:CDS | 50.0% | |
AGCCTCGTCATATCGAGACA+GGG | + | chr3_3:65879600-65879619 | None:intergenic | 50.0% | |
GGAGAGAATCATCCAGCAGT+AGG | - | chr3_3:65879665-65879684 | Msa0465470:CDS | 50.0% | |
GAATCATCCAGCAGTAGGGT+CGG | - | chr3_3:65879670-65879689 | Msa0465470:CDS | 50.0% | |
AGGGTCGGTCTTTGTACGTT+TGG | - | chr3_3:65879685-65879704 | Msa0465470:CDS | 50.0% | |
! | TCTGGAGTAACTCCAGGCAT+TGG | + | chr3_3:65879788-65879807 | None:intergenic | 50.0% |
AATGCCTGGAGTTACTCCAG+AGG | - | chr3_3:65879787-65879806 | Msa0465470:CDS | 50.0% | |
!! | ATCTCCTCTGGAGTAACTCC+AGG | + | chr3_3:65879794-65879813 | None:intergenic | 50.0% |
ACTCCAGAGGAGATTGCTAG+CGG | - | chr3_3:65879800-65879819 | Msa0465470:CDS | 50.0% | |
GGCACTCAAGTTACTGCAGA+AGG | - | chr3_3:65879871-65879890 | Msa0465470:CDS | 50.0% | |
GCTATTGTTCCTTGCTGACC+AGG | + | chr3_3:65879920-65879939 | None:intergenic | 50.0% | |
GGTCAGCAAGGAACAATAGC+AGG | - | chr3_3:65879920-65879939 | Msa0465470:CDS | 50.0% | |
TAAGGCATAACGCTGCACAC+AGG | + | chr3_3:65880095-65880114 | None:intergenic | 50.0% | |
GTGTGCAGCGTTATGCCTTA+AGG | - | chr3_3:65880095-65880114 | Msa0465470:CDS | 50.0% | |
CCAAGCGTTTCAGGGTGATA+AGG | + | chr3_3:65880175-65880194 | None:intergenic | 50.0% | |
CCTTATCACCCTGAAACGCT+TGG | - | chr3_3:65880172-65880191 | Msa0465470:CDS | 50.0% | |
GCCTGCTTCACACAATACCT+TGG | + | chr3_3:65880329-65880348 | None:intergenic | 50.0% | |
ATGAGTGGCATGACTCGATC+AGG | + | chr3_3:65880391-65880410 | None:intergenic | 50.0% | |
TAGACCCCAAGAAAGAAGGG+TGG | - | chr3_3:65880563-65880582 | Msa0465470:CDS | 50.0% | |
AGACCCCAAGAAAGAAGGGT+GGG | - | chr3_3:65880564-65880583 | Msa0465470:CDS | 50.0% | |
ACTCCCCACCCTTCTTTCTT+GGG | + | chr3_3:65880571-65880590 | None:intergenic | 50.0% | |
AACTCCCCACCCTTCTTTCT+TGG | + | chr3_3:65880572-65880591 | None:intergenic | 50.0% | |
GCACGTTGTTAGTATGAGGG+AGG | - | chr3_3:65880764-65880783 | Msa0465470:CDS | 50.0% | |
GTATGAGGGAGGAAAAGCTC+GGG | - | chr3_3:65880775-65880794 | Msa0465470:CDS | 50.0% | |
ACAAACGGGGTTCATGGCGA+TGG | - | chr3_3:65878159-65878178 | Msa0465470:CDS | 55.0% | |
CAAACGGGGTTCATGGCGAT+GGG | - | chr3_3:65878160-65878179 | Msa0465470:CDS | 55.0% | |
AAACGGGGTTCATGGCGATG+GGG | - | chr3_3:65878161-65878180 | Msa0465470:CDS | 55.0% | |
CCAACGCTTTGACGTCTCTG+TGG | + | chr3_3:65878267-65878286 | None:intergenic | 55.0% | |
CCACAGAGACGTCAAAGCGT+TGG | - | chr3_3:65878264-65878283 | Msa0465470:CDS | 55.0% | |
GCTCAACAACCCCATCATCC+TGG | + | chr3_3:65878299-65878318 | None:intergenic | 55.0% | |
TGCACCATTTGGTTGGGGGA+CGG | - | chr3_3:65878430-65878449 | Msa0465470:intron | 55.0% | |
TCATCCGTCCCCCAACCAAA+TGG | + | chr3_3:65878437-65878456 | None:intergenic | 55.0% | |
ATTTGGTTGGGGGACGGATG+AGG | - | chr3_3:65878436-65878455 | Msa0465470:intron | 55.0% | |
TTTGGTTGGGGGACGGATGA+GGG | - | chr3_3:65878437-65878456 | Msa0465470:intron | 55.0% | |
AATGGAAGAGGAGGTGGAGG+TGG | - | chr3_3:65878470-65878489 | Msa0465470:intron | 55.0% | |
! | AGGCCAGGAGAGAGTTCTAG+TGG | - | chr3_3:65878504-65878523 | Msa0465470:intron | 55.0% |
! | GGCCAGGAGAGAGTTCTAGT+GGG | - | chr3_3:65878505-65878524 | Msa0465470:intron | 55.0% |
! | GCCAGGAGAGAGTTCTAGTG+GGG | - | chr3_3:65878506-65878525 | Msa0465470:intron | 55.0% |
TCCCCACTAGAACTCTCTCC+TGG | + | chr3_3:65878510-65878529 | None:intergenic | 55.0% | |
TCCTCCTGCTAAAGCTCCTC+TGG | - | chr3_3:65878761-65878780 | Msa0465470:intron | 55.0% | |
! | TCCAGAGGAGCTTTAGCAGG+AGG | + | chr3_3:65878765-65878784 | None:intergenic | 55.0% |
! | CTCTCCAGAGGAGCTTTAGC+AGG | + | chr3_3:65878768-65878787 | None:intergenic | 55.0% |
CAGCCTGGGTCGATATAGTG+AGG | - | chr3_3:65879094-65879113 | Msa0465470:CDS | 55.0% | |
AGCTGCTGATAGGAGGCTCA+TGG | - | chr3_3:65879439-65879458 | Msa0465470:CDS | 55.0% | |
GCTGCTGATAGGAGGCTCAT+GGG | - | chr3_3:65879440-65879459 | Msa0465470:CDS | 55.0% | |
! | CAGATGCCACTTCCGCTTCT+TGG | + | chr3_3:65879547-65879566 | None:intergenic | 55.0% |
CAGCCTCGTCATATCGAGAC+AGG | + | chr3_3:65879601-65879620 | None:intergenic | 55.0% | |
ACAAAGACCGACCCTACTGC+TGG | + | chr3_3:65879680-65879699 | None:intergenic | 55.0% | |
AGACCGCTAGCAATCTCCTC+TGG | + | chr3_3:65879806-65879825 | None:intergenic | 55.0% | |
AATGATGCCCCTGGTCAGCA+AGG | - | chr3_3:65879908-65879927 | Msa0465470:CDS | 55.0% | |
AGCAGGAATCGAAGCTCAGG+TGG | - | chr3_3:65879937-65879956 | Msa0465470:CDS | 55.0% | |
GCAGGAATCGAAGCTCAGGT+GGG | - | chr3_3:65879938-65879957 | Msa0465470:CDS | 55.0% | |
CAGGAATCGAAGCTCAGGTG+GGG | - | chr3_3:65879939-65879958 | Msa0465470:CDS | 55.0% | |
AGGAATCGAAGCTCAGGTGG+GGG | - | chr3_3:65879940-65879959 | Msa0465470:CDS | 55.0% | |
GCACGTACGACGCAATTGGA+AGG | - | chr3_3:65880215-65880234 | Msa0465470:CDS | 55.0% | |
GACCCCAAGAAAGAAGGGTG+GGG | - | chr3_3:65880565-65880584 | Msa0465470:CDS | 55.0% | |
CTCCCCACCCTTCTTTCTTG+GGG | + | chr3_3:65880570-65880589 | None:intergenic | 55.0% | |
GAAGAGGAGGTGGAGGTGGA+GGG | - | chr3_3:65878474-65878493 | Msa0465470:intron | 60.0% | |
AAGAGGAGGTGGAGGTGGAG+GGG | - | chr3_3:65878475-65878494 | Msa0465470:intron | 60.0% | |
GCAGGCACGTACGACGCAAT+TGG | - | chr3_3:65880211-65880230 | Msa0465470:CDS | 60.0% | |
! | TGCGAGCGTCGCCGTCAAAA+AGG | + | chr3_3:65880899-65880918 | None:intergenic | 60.0% |
GGAAGAGGAGGTGGAGGTGG+AGG | - | chr3_3:65878473-65878492 | Msa0465470:intron | 65.0% | |
AGAGGAGGTGGAGGTGGAGG+GGG | - | chr3_3:65878476-65878495 | Msa0465470:intron | 65.0% | |
TGGAGGTGGAGGGGGGAAGA+AGG | - | chr3_3:65878484-65878503 | Msa0465470:intron | 65.0% | |
TGGGGGACGGATGAGGGAGC+TGG | - | chr3_3:65878443-65878462 | Msa0465470:intron | 70.0% | |
GAGGAGGTGGAGGTGGAGGG+GGG | - | chr3_3:65878477-65878496 | Msa0465470:intron | 70.0% | |
GTGGAGGGGGGAAGAAGGCC+AGG | - | chr3_3:65878489-65878508 | Msa0465470:intron | 70.0% | |
CGGGACAGCGAATCCCGACG+TGG | - | chr3_3:65880794-65880813 | Msa0465470:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 65877732 | 65881325 | 65877732 | ID=Msa0465470;Name=Msa0465470 |
chr3_3 | mRNA | 65877732 | 65881325 | 65877732 | ID=Msa0465470-mRNA-1;Parent=Msa0465470;Name=Msa0465470-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.5|0.33|1|1|1|3|378|794 |
chr3_3 | exon | 65877732 | 65878320 | 65877732 | ID=Msa0465470-mRNA-1:exon:14771;Parent=Msa0465470-mRNA-1 |
chr3_3 | exon | 65878821 | 65880942 | 65878821 | ID=Msa0465470-mRNA-1:exon:14770;Parent=Msa0465470-mRNA-1 |
chr3_3 | exon | 65881274 | 65881325 | 65881274 | ID=Msa0465470-mRNA-1:exon:14769;Parent=Msa0465470-mRNA-1 |
chr3_3 | CDS | 65881274 | 65881325 | 65881274 | ID=Msa0465470-mRNA-1:cds;Parent=Msa0465470-mRNA-1 |
chr3_3 | CDS | 65878821 | 65880942 | 65878821 | ID=Msa0465470-mRNA-1:cds;Parent=Msa0465470-mRNA-1 |
chr3_3 | CDS | 65878110 | 65878320 | 65878110 | ID=Msa0465470-mRNA-1:cds;Parent=Msa0465470-mRNA-1 |
chr3_3 | three_prime_UTR | 65877732 | 65878109 | 65877732 | ID=Msa0465470-mRNA-1:three_prime_utr;Parent=Msa0465470-mRNA-1 |
Gene Sequence |
Protein sequence |