Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171760 | XP_003601279.1 | 97.610 | 795 | 18 | 1 | 1 | 794 | 1 | 795 | 0.0 | 1588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171760 | sp|F4HSX9|KLCR3_ARATH | 65.809 | 544 | 174 | 4 | 248 | 783 | 103 | 642 | 0.0 | 730 |
| Msa1171760 | sp|F4HSX9|KLCR3_ARATH | 48.148 | 81 | 42 | 0 | 81 | 161 | 14 | 94 | 1.63e-14 | 81.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171760 | G7J5H3 | 97.610 | 795 | 18 | 1 | 1 | 794 | 1 | 795 | 0.0 | 1588 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0055070 | Msa1171760 | 0.820170 | 7.902551e-53 | -8.615850e-47 |
| Msa0101020 | Msa1171760 | 0.820812 | 5.627962e-53 | -8.615850e-47 |
| Msa0119320 | Msa1171760 | 0.823971 | 1.039261e-53 | -8.615850e-47 |
| Msa0615550 | Msa1171760 | 0.810566 | 1.081382e-50 | -8.615850e-47 |
| Msa0698440 | Msa1171760 | 0.800792 | 1.220680e-48 | -8.615850e-47 |
| Msa0750250 | Msa1171760 | 0.809138 | 2.193929e-50 | -8.615850e-47 |
| Msa0794840 | Msa1171760 | 0.820094 | 8.223784e-53 | -8.615850e-47 |
| Msa0820890 | Msa1171760 | 0.811130 | 8.165635e-51 | -8.615850e-47 |
| Msa0145110 | Msa1171760 | 0.830536 | 2.778555e-55 | -8.615850e-47 |
| Msa0164460 | Msa1171760 | 0.815413 | 9.364990e-52 | -8.615850e-47 |
| Msa0193540 | Msa1171760 | 0.821980 | 3.026100e-53 | -8.615850e-47 |
| Msa0229940 | Msa1171760 | 0.800735 | 1.253628e-48 | -8.615850e-47 |
| Msa0235470 | Msa1171760 | 0.805736 | 1.155834e-49 | -8.615850e-47 |
| Msa0429090 | Msa1171760 | 0.805744 | 1.151482e-49 | -8.615850e-47 |
| Msa0465470 | Msa1171760 | 0.914731 | 1.358366e-84 | -8.615850e-47 |
| Msa0475500 | Msa1171760 | 0.801540 | 8.581597e-49 | -8.615850e-47 |
| Msa1010460 | Msa1171760 | 0.836448 | 9.301981e-57 | -8.615850e-47 |
| Msa1096550 | Msa1171760 | 0.828430 | 9.027725e-55 | -8.615850e-47 |
| Msa0274630 | Msa1171760 | 0.826269 | 2.975793e-54 | -8.615850e-47 |
| Msa0314060 | Msa1171760 | 0.807721 | 4.401100e-50 | -8.615850e-47 |
| Msa0339280 | Msa1171760 | 0.808035 | 3.774591e-50 | -8.615850e-47 |
| Msa1128330 | Msa1171760 | 0.807651 | 4.555575e-50 | -8.615850e-47 |
| Msa1133570 | Msa1171760 | 0.802180 | 6.341193e-49 | -8.615850e-47 |
| Msa1171760 | Msa1297960 | 0.802962 | 4.374113e-49 | -8.615850e-47 |
| Msa1171760 | Msa1330780 | 0.801223 | 9.965442e-49 | -8.615850e-47 |
| Msa1171760 | Msa1400070 | 0.805178 | 1.512969e-49 | -8.615850e-47 |
| Msa1171760 | Msa1445220 | 0.807468 | 4.980890e-50 | -8.615850e-47 |
| Msa1171760 | Msa1458030 | 0.830930 | 2.224506e-55 | -8.615850e-47 |
| Msa0511330 | Msa1171760 | 0.945114 | 5.587023e-104 | -8.615850e-47 |
| Msa0511420 | Msa1171760 | 0.867165 | 1.673063e-65 | -8.615850e-47 |
| Msa0573040 | Msa1171760 | 0.808575 | 2.895204e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171760 | MtrunA17_Chr3g0117701 | 98.175 | 767 | 14 | 0 | 28 | 794 | 1 | 767 | 0.0 | 1545 |
| Msa1171760 | MtrunA17_Chr4g0059101 | 71.773 | 581 | 162 | 2 | 203 | 781 | 88 | 668 | 0.0 | 853 |
| Msa1171760 | MtrunA17_Chr6g0450741 | 64.875 | 558 | 181 | 5 | 240 | 793 | 152 | 698 | 0.0 | 734 |
| Msa1171760 | MtrunA17_Chr6g0450741 | 51.724 | 116 | 45 | 3 | 44 | 149 | 8 | 122 | 4.13e-20 | 95.5 |
| Msa1171760 | MtrunA17_Chr8g0388631 | 62.795 | 508 | 188 | 1 | 279 | 785 | 64 | 571 | 0.0 | 691 |
| Msa1171760 | MtrunA17_Chr8g0346601 | 60.990 | 505 | 195 | 1 | 280 | 784 | 52 | 554 | 0.0 | 654 |
| Msa1171760 | MtrunA17_Chr1g0184181 | 26.523 | 509 | 358 | 6 | 272 | 773 | 83 | 582 | 1.03e-42 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171760 | AT1G27500.2 | 65.809 | 544 | 174 | 4 | 248 | 783 | 114 | 653 | 0.0 | 730 |
| Msa1171760 | AT1G27500.2 | 48.148 | 81 | 42 | 0 | 81 | 161 | 25 | 105 | 1.58e-15 | 81.3 |
| Msa1171760 | AT1G27500.1 | 65.809 | 544 | 174 | 4 | 248 | 783 | 103 | 642 | 0.0 | 730 |
| Msa1171760 | AT1G27500.1 | 48.148 | 81 | 42 | 0 | 81 | 161 | 14 | 94 | 1.66e-15 | 81.3 |
| Msa1171760 | AT3G27960.1 | 63.419 | 544 | 188 | 3 | 256 | 788 | 114 | 657 | 0.0 | 710 |
| Msa1171760 | AT3G27960.1 | 43.182 | 132 | 51 | 5 | 40 | 170 | 4 | 112 | 3.88e-12 | 70.5 |
| Msa1171760 | AT3G27960.3 | 63.419 | 544 | 188 | 3 | 256 | 788 | 114 | 657 | 0.0 | 710 |
| Msa1171760 | AT3G27960.3 | 43.182 | 132 | 51 | 5 | 40 | 170 | 4 | 112 | 3.88e-12 | 70.5 |
| Msa1171760 | AT4G10840.1 | 57.739 | 575 | 224 | 6 | 222 | 785 | 25 | 591 | 0.0 | 668 |
| Msa1171760 | AT3G27960.2 | 63.617 | 481 | 164 | 3 | 256 | 725 | 114 | 594 | 0.0 | 637 |
| Msa1171760 | AT3G27960.2 | 43.182 | 132 | 51 | 5 | 40 | 170 | 4 | 112 | 3.45e-12 | 70.5 |
| Msa1171760 | AT4G10840.2 | 57.087 | 515 | 202 | 6 | 222 | 725 | 25 | 531 | 0.0 | 590 |
| Msa1171760 | AT2G31240.1 | 26.916 | 509 | 359 | 6 | 272 | 773 | 101 | 603 | 8.97e-40 | 156 |
Find 223 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGTCCAGAGGCATATTT+TGG | 0.153258 | 8_1:-1687361 | Msa1171760:CDS |
| AAAGAATCAAGTTTCTTTAA+AGG | 0.155018 | 8_1:+1685675 | None:intergenic |
| CTATATACTCCAAGCGTTTC+AGG | 0.160309 | 8_1:+1686451 | None:intergenic |
| TTGATTCTTTGATGCTTTAC+AGG | 0.208801 | 8_1:-1685662 | Msa1171760:three_prime_UTR |
| ATTTGTTGTCACAGGTATTC+TGG | 0.218490 | 8_1:-1688531 | Msa1171760:intron |
| TTGACGAGTGTTATACTTAA+TGG | 0.224583 | 8_1:-1685577 | Msa1171760:three_prime_UTR |
| CAGATGCCACTTCGGCTTCT+TGG | 0.257689 | 8_1:+1687088 | None:intergenic |
| TGGTATTGCTCTTAATCAAC+TGG | 0.262779 | 8_1:-1686569 | Msa1171760:CDS |
| AGAGGAGGTGGAGGTGGAGG+GGG | 0.264395 | 8_1:-1688156 | Msa1171760:CDS |
| TTATACTTAATGGGGTAAAA+TGG | 0.275982 | 8_1:-1685567 | Msa1171760:three_prime_UTR |
| GGAAGAGGAGGTGGAGGTGG+AGG | 0.285387 | 8_1:-1688159 | Msa1171760:CDS |
| ATGAAACTGTTTGAGAAGTT+TGG | 0.293874 | 8_1:-1687621 | Msa1171760:CDS |
| TGAGGAAGCAAAGAGTGTTT+TGG | 0.304839 | 8_1:-1686497 | Msa1171760:CDS |
| AATGAGTCGCGTTGAGAATT+CGG | 0.307148 | 8_1:-1687757 | Msa1171760:CDS |
| GAGAAGAAATCATCCTTCTT+TGG | 0.307647 | 8_1:-1686589 | Msa1171760:CDS |
| ACCCCATCATCCTGGAAATT+AGG | 0.314654 | 8_1:+1688344 | None:intergenic |
| AAGGTTGAGTGATTTGTTAA+AGG | 0.318973 | 8_1:-1685802 | Msa1171760:CDS |
| TGACGAGTGTTATACTTAAT+GGG | 0.321421 | 8_1:-1685576 | Msa1171760:three_prime_UTR |
| CTTTAAAGGAAATCCTTATC+AGG | 0.322334 | 8_1:+1685689 | None:intergenic |
| CGGAATTGCACCATTTGGTT+GGG | 0.324212 | 8_1:-1688208 | Msa1171760:CDS |
| TCAGCAGCTTCTTCAATAGA+TGG | 0.329233 | 8_1:+1687207 | None:intergenic |
| ATCACAAAACTTCGTGCTAT+TGG | 0.329949 | 8_1:-1686613 | Msa1171760:CDS |
| TGGATGATTCTCTCCTTTGC+TGG | 0.330223 | 8_1:+1686975 | None:intergenic |
| TGTTGACTTTCCCCGATATC+AGG | 0.331061 | 8_1:+1687483 | None:intergenic |
| AATGGAAGAGGAGGTGGAGG+TGG | 0.332230 | 8_1:-1688162 | Msa1171760:CDS |
| TGGTGAAACTTGTCGGTATT+TGG | 0.339201 | 8_1:-1687319 | Msa1171760:CDS |
| CATGCTCTTGCTAAATTTGC+CGG | 0.339227 | 8_1:-1687459 | Msa1171760:CDS |
| GAGGAGGTGGAGGTGGAGGG+GGG | 0.339394 | 8_1:-1688155 | Msa1171760:CDS |
| AAACAAACTAGAGGAGTTAA+TGG | 0.352716 | 8_1:-1687822 | Msa1171760:CDS |
| TGCGAGCGTCGCCGTCAAAA+AGG | 0.357744 | 8_1:+1685736 | None:intergenic |
| CTTGCTTGCTTTAGTAATAT+CGG | 0.357866 | 8_1:+1687702 | None:intergenic |
| GATGAGGGAGCTGGAGATAA+TGG | 0.359970 | 8_1:-1688180 | Msa1171760:CDS |
| GAATTCAAAGAATTCTCCTT+TGG | 0.361948 | 8_1:-1687793 | Msa1171760:CDS |
| ACCCCGTTTGTAACAATTCC+CGG | 0.363264 | 8_1:+1688485 | None:intergenic |
| TCGATTGAGATTCCTGATAT+CGG | 0.368583 | 8_1:-1687495 | Msa1171760:CDS |
| AAGAGGAGGTGGAGGTGGAG+GGG | 0.369474 | 8_1:-1688157 | Msa1171760:CDS |
| GGAGTATATAGTAATCTTGC+AGG | 0.374241 | 8_1:-1686439 | Msa1171760:CDS |
| GAACTCCTTGGAGACTTGAT+TGG | 0.374643 | 8_1:+1688398 | None:intergenic |
| AGGGTCGGTCTTTGTACGTT+TGG | 0.381995 | 8_1:-1686947 | Msa1171760:CDS |
| GTTTGGCTGACTTGTATAAC+AGG | 0.382339 | 8_1:-1686930 | Msa1171760:CDS |
| CTGTCTGAAACTCTTTGATA+TGG | 0.391161 | 8_1:-1685386 | Msa1171760:three_prime_UTR |
| TCTAGTGGGGAAACATCTTC+TGG | 0.391241 | 8_1:-1688113 | Msa1171760:CDS |
| TTGTCAAACCACTGAATTCA+AGG | 0.391923 | 8_1:-1687938 | Msa1171760:CDS |
| ATTGTTACAAACGGGGTTCA+TGG | 0.395239 | 8_1:-1688479 | Msa1171760:CDS |
| TGGTAATGGGAAGCCGAGTT+TGG | 0.395609 | 8_1:-1687601 | Msa1171760:CDS |
| GTGTGCAGCGTTATGCCTTA+AGG | 0.399879 | 8_1:-1686537 | Msa1171760:CDS |
| TGATTCGGAATTGCACCATT+TGG | 0.399915 | 8_1:-1688213 | Msa1171760:CDS |
| GGAGATAATGGAAGAGGAGG+TGG | 0.401440 | 8_1:-1688168 | Msa1171760:CDS |
| TCGCCCTCGAGACAAAGTTT+TGG | 0.402595 | 8_1:-1688260 | Msa1171760:CDS |
| CGATTGAGATTCCTGATATC+GGG | 0.404768 | 8_1:-1687494 | Msa1171760:CDS |
| TGGGAAGCCGAGTTTGGAAT+TGG | 0.408392 | 8_1:-1687595 | Msa1171760:CDS |
| AATTCAAAGAATTCTCCTTT+GGG | 0.410118 | 8_1:-1687792 | Msa1171760:CDS |
| TGGAGCACGTTGTTAGTATG+AGG | 0.413215 | 8_1:-1685872 | Msa1171760:CDS |
| TGCCGGGAATTGTTACAAAC+GGG | 0.416439 | 8_1:-1688487 | Msa1171760:CDS |
| GTCCTAATTTCCAGGATGAT+GGG | 0.417051 | 8_1:-1688346 | Msa1171760:CDS |
| GCTATTGTTCCTTGCTGACC+AGG | 0.418541 | 8_1:+1686715 | None:intergenic |
| CTCTCCAGAGGAGCTTTAGC+AGG | 0.418882 | 8_1:+1687867 | None:intergenic |
| AGTAATATCGGTGCTCGCTC+TGG | 0.418974 | 8_1:+1687714 | None:intergenic |
| GCAAGAGATCTTATGTCAAC+TGG | 0.419614 | 8_1:-1687684 | Msa1171760:CDS |
| GGATGATGCAATTCTAACTT+TGG | 0.420399 | 8_1:-1685892 | Msa1171760:CDS |
| AAGCGTTGGTCCTAATTTCC+AGG | 0.424656 | 8_1:-1688354 | Msa1171760:CDS |
| TCCTCCTGCTAAAGCTCCTC+TGG | 0.425124 | 8_1:-1687871 | Msa1171760:CDS |
| CTCAATCGAACGCTCAAGAA+TGG | 0.425249 | 8_1:+1687509 | None:intergenic |
| GGTCCTAATTTCCAGGATGA+TGG | 0.425860 | 8_1:-1688347 | Msa1171760:CDS |
| TGTTTGAGAAGTTTGGTAAT+GGG | 0.426594 | 8_1:-1687614 | Msa1171760:CDS |
| CTGTTTGAGAAGTTTGGTAA+TGG | 0.428608 | 8_1:-1687615 | Msa1171760:CDS |
| CGACAAGTTTCACCAACTCT+TGG | 0.428964 | 8_1:+1687327 | None:intergenic |
| TTTATCTGATGATAAGAAGT+TGG | 0.431998 | 8_1:-1688081 | Msa1171760:CDS |
| TCAATAATGTTCTACACTGC+TGG | 0.436270 | 8_1:-1687387 | Msa1171760:CDS |
| TGTGCAGCGTTATGCCTTAA+GGG | 0.442956 | 8_1:-1686536 | Msa1171760:CDS |
| TAACAGGACAGGGAAGATAA+AGG | 0.443611 | 8_1:-1686914 | Msa1171760:CDS |
| GTCAATGAATGAGGTTGATC+AGG | 0.448692 | 8_1:-1686782 | Msa1171760:CDS |
| TAATTCTATAGCTTCCCTTA+AGG | 0.449230 | 8_1:+1686522 | None:intergenic |
| CTTGTCATCAAGGCCTGATA+AGG | 0.452876 | 8_1:-1685702 | Msa1171760:exon |
| CGCAGCAATATATTGCAGCC+TGG | 0.453642 | 8_1:-1687553 | Msa1171760:CDS |
| GAAGAGGAGGTGGAGGTGGA+GGG | 0.453852 | 8_1:-1688158 | Msa1171760:CDS |
| CATATATGAAACGAAACAAA+GGG | 0.454124 | 8_1:+1685417 | None:intergenic |
| GATAATGGAAGAGGAGGTGG+AGG | 0.458491 | 8_1:-1688165 | Msa1171760:CDS |
| TGGAGTTAAACTTTCCTTAG+TGG | 0.459596 | 8_1:+1688418 | None:intergenic |
| GCAGGCACGTACGACGCAAT+TGG | 0.460085 | 8_1:-1686421 | Msa1171760:CDS |
| TCGGAATTGCACCATTTGGT+TGG | 0.461069 | 8_1:-1688209 | Msa1171760:CDS |
| TATATACTCCAAGCGTTTCA+GGG | 0.461186 | 8_1:+1686452 | None:intergenic |
| TTTAAACAACCTTGTCATCA+AGG | 0.463538 | 8_1:-1685712 | Msa1171760:CDS |
| GGTCTTATATGTGAAACAAA+GGG | 0.464250 | 8_1:-1687171 | Msa1171760:CDS |
| GACAAGTTTCACCAACTCTT+GGG | 0.466081 | 8_1:+1687328 | None:intergenic |
| TCCCCACTAGAACTCTCTCC+TGG | 0.466231 | 8_1:+1688125 | None:intergenic |
| GGGGTTATGTATTACATGTT+GGG | 0.468336 | 8_1:-1686673 | Msa1171760:CDS |
| CAAACCACTGAATTCAAGGT+TGG | 0.471026 | 8_1:-1687934 | Msa1171760:CDS |
| TCATCACAAAGAATGTTCAT+TGG | 0.472722 | 8_1:+1688904 | None:intergenic |
| GGAAGCTATAGAATTATTTG+AGG | 0.473262 | 8_1:-1686515 | Msa1171760:CDS |
| TGATGATAAGAAGTTGGATA+TGG | 0.475057 | 8_1:-1688075 | Msa1171760:CDS |
| GTCTCCAAGTTGCATGTGAC+CGG | 0.476378 | 8_1:+1687440 | None:intergenic |
| CTATTGAAGAAGCTGCTGAT+AGG | 0.478081 | 8_1:-1687203 | Msa1171760:CDS |
| TGGAGACACCTATGCTATGT+TGG | 0.481996 | 8_1:-1687424 | Msa1171760:CDS |
| CACATAACCAATTCCAAACT+CGG | 0.483673 | 8_1:+1687588 | None:intergenic |
| TGATGAGTCTAGAATTGATT+CGG | 0.484230 | 8_1:-1688228 | Msa1171760:CDS |
| AGCATGGCAATGGTTGCAAA+TGG | 0.484872 | 8_1:-1687111 | Msa1171760:CDS |
| CAGCCTCGTCATATCGAGAC+AGG | 0.487359 | 8_1:+1687034 | None:intergenic |
| GGGGAAACATCTTCTGGAAT+GGG | 0.488806 | 8_1:-1688107 | Msa1171760:CDS |
| GGAGCTGGAGATAATGGAAG+AGG | 0.489221 | 8_1:-1688174 | Msa1171760:CDS |
| GCTCAACAACCCCATCATCC+TGG | 0.489936 | 8_1:+1688336 | None:intergenic |
| ATTAAGAGCAATACCAAAGA+AGG | 0.492243 | 8_1:+1686576 | None:intergenic |
| CAGCAGCTTCTTCAATAGAT+GGG | 0.492737 | 8_1:+1687208 | None:intergenic |
| ACAAACGGGGTTCATGGCGA+TGG | 0.494013 | 8_1:-1688473 | Msa1171760:CDS |
| GGTATTGCTCTTAATCAACT+GGG | 0.495438 | 8_1:-1686568 | Msa1171760:CDS |
| CAAGAGTTGGTGAAACTTGT+CGG | 0.496966 | 8_1:-1687326 | Msa1171760:CDS |
| CCGGTGATTGAGATTCAATC+TGG | 0.498243 | 8_1:-1688023 | Msa1171760:CDS |
| CTTATCAGGCCTTGATGACA+AGG | 0.498399 | 8_1:+1685703 | None:intergenic |
| GGAGTTAAACTTTCCTTAGT+GGG | 0.499590 | 8_1:+1688419 | None:intergenic |
| ATGCCGGGAATTGTTACAAA+CGG | 0.499833 | 8_1:-1688488 | Msa1171760:CDS |
| CCAAGCGTTTCAGGGTGATA+AGG | 0.500209 | 8_1:+1686460 | None:intergenic |
| TGGGGAAACATCTTCTGGAA+TGG | 0.500676 | 8_1:-1688108 | Msa1171760:CDS |
| TTTGCCGGTCACATGCAACT+TGG | 0.500974 | 8_1:-1687444 | Msa1171760:CDS |
| AGACCGCTAGCAATCTCCTC+TGG | 0.501919 | 8_1:+1686829 | None:intergenic |
| TGTGGACTCATTGAACTCCT+TGG | 0.504396 | 8_1:+1688386 | None:intergenic |
| GGAATTGCACCATTTGGTTG+GGG | 0.505497 | 8_1:-1688207 | Msa1171760:CDS |
| CAAACGGGGTTCATGGCGAT+GGG | 0.505611 | 8_1:-1688472 | Msa1171760:CDS |
| ACAAAGACCGACCCTACTGC+TGG | 0.507046 | 8_1:+1686955 | None:intergenic |
| TTTCTCCCAAAATATGCCTC+TGG | 0.508008 | 8_1:+1687355 | None:intergenic |
| TCAATCGAACGCTCAAGAAT+GGG | 0.508874 | 8_1:+1687510 | None:intergenic |
| TTTGACAATTACATATATGT+TGG | 0.510684 | 8_1:-1685356 | Msa1171760:three_prime_UTR |
| AAAATGGAATCATTGAAAAG+TGG | 0.511725 | 8_1:-1685551 | Msa1171760:three_prime_UTR |
| GCATCTGTTGACTGCAGCAT+TGG | 0.511790 | 8_1:-1687072 | Msa1171760:CDS |
| GGAGACACCTATGCTATGTT+GGG | 0.514722 | 8_1:-1687423 | Msa1171760:CDS |
| TATTGTCTATTAACACTGTC+GGG | 0.516937 | 8_1:+1685603 | None:intergenic |
| CTATTGTTCCTTGCTGACCA+GGG | 0.516960 | 8_1:+1686716 | None:intergenic |
| GCTGACTTGTATAACAGGAC+AGG | 0.521984 | 8_1:-1686925 | Msa1171760:CDS |
| ATATATGAGAATCCAATGCC+TGG | 0.522080 | 8_1:-1686859 | Msa1171760:CDS |
| TCAATCTGGTAGTAAAAGTC+CGG | 0.522430 | 8_1:-1688009 | Msa1171760:CDS |
| TCAATCTGGTAGTAAAAGTC+CGG | 0.522430 | 8_1:-1688042 | Msa1171760:CDS |
| AAACCACTGAATTCAAGGTT+GGG | 0.523272 | 8_1:-1687933 | Msa1171760:CDS |
| GGAGAGAATCATCCAGCAGT+AGG | 0.523946 | 8_1:-1686967 | Msa1171760:CDS |
| ATGGTGGCTGAGATTCAATC+TGG | 0.526317 | 8_1:-1688056 | Msa1171760:CDS |
| GAATTCGAAGCAGAAAAGTC+AGG | 0.526447 | 8_1:-1685770 | Msa1171760:CDS |
| TCCTAATTTCCAGGATGATG+GGG | 0.527955 | 8_1:-1688345 | Msa1171760:CDS |
| AGTGATTTGTTAAAGGAAGC+CGG | 0.532534 | 8_1:-1685795 | Msa1171760:CDS |
| CCTTATCACCCTGAAACGCT+TGG | 0.533024 | 8_1:-1686460 | Msa1171760:CDS |
| ATCTCCTCTGGAGTAACTCC+AGG | 0.533475 | 8_1:+1686841 | None:intergenic |
| ACGATCTAGTAGTAAAAGTC+CGG | 0.534457 | 8_1:-1687976 | Msa1171760:CDS |
| TGTGAACAATTCTCCCACTA+AGG | 0.536500 | 8_1:-1688432 | Msa1171760:CDS |
| AGCTGCTGATAGGAGGCTCA+TGG | 0.537279 | 8_1:-1687193 | Msa1171760:CDS |
| TCTGAGAGAATTAAAGATGC+CGG | 0.537446 | 8_1:-1688504 | Msa1171760:CDS |
| AGCAGAGGAGATCTGTCAAA+TGG | 0.537766 | 8_1:-1687262 | Msa1171760:CDS |
| GGTCAGCAAGGAACAATAGC+AGG | 0.538063 | 8_1:-1686712 | Msa1171760:CDS |
| ATATTGTCTATTAACACTGT+CGG | 0.538572 | 8_1:+1685602 | None:intergenic |
| CAAGTTACTGCAGAAAGCAT+TGG | 0.539243 | 8_1:-1686755 | Msa1171760:CDS |
| CTGAGAGAATTAAAGATGCC+GGG | 0.540648 | 8_1:-1688503 | Msa1171760:CDS |
| TCTGGAGTAACTCCAGGCAT+TGG | 0.542481 | 8_1:+1686847 | None:intergenic |
| GGGTCTTATATGTGAAACAA+AGG | 0.545385 | 8_1:-1687172 | Msa1171760:CDS |
| AATAGCAGGAATCGAAGCTC+AGG | 0.546276 | 8_1:-1686698 | Msa1171760:CDS |
| GAGCCCAACCTTGAATTCAG+TGG | 0.557395 | 8_1:+1687930 | None:intergenic |
| GGAGCACGTTGTTAGTATGA+GGG | 0.558173 | 8_1:-1685871 | Msa1171760:CDS |
| CATTCATAGAGAAAATAGTT+CGG | 0.559898 | 8_1:-1687232 | Msa1171760:CDS |
| AGGCCAGGAGAGAGTTCTAG+TGG | 0.560737 | 8_1:-1688128 | Msa1171760:CDS |
| TCATATATGAAACGAAACAA+AGG | 0.563522 | 8_1:+1685416 | None:intergenic |
| CTAGATCGTGTCTTAACCAC+CGG | 0.564205 | 8_1:+1687990 | None:intergenic |
| TTTGCAATTTAATGAAGCAG+AGG | 0.566998 | 8_1:-1687277 | Msa1171760:CDS |
| TCATAAAGCTGCTCGATCGA+AGG | 0.567443 | 8_1:+1688314 | None:intergenic |
| GCTGGAGATAATGGAAGAGG+AGG | 0.567552 | 8_1:-1688171 | Msa1171760:CDS |
| TGATCATTCTTTCTCTCCAG+AGG | 0.571551 | 8_1:+1687855 | None:intergenic |
| GGAGAAACAGACCCAAGAGT+TGG | 0.572030 | 8_1:-1687339 | Msa1171760:CDS |
| GCAGCAATATATTGCAGCCT+GGG | 0.572631 | 8_1:-1687552 | Msa1171760:CDS |
| TTGAAGAAGCTGCTGATAGG+AGG | 0.574364 | 8_1:-1687200 | Msa1171760:CDS |
| GAGAGAATCATCCAGCAGTA+GGG | 0.578129 | 8_1:-1686966 | Msa1171760:CDS |
| AATGATGCCCCTGGTCAGCA+AGG | 0.578324 | 8_1:-1686724 | Msa1171760:CDS |
| GAGATATATAATGATGCCCC+TGG | 0.582463 | 8_1:-1686733 | Msa1171760:CDS |
| CCAGATTGAATCTCAATCAC+CGG | 0.584520 | 8_1:+1688023 | None:intergenic |
| TATTGTTCCTTGCTGACCAG+GGG | 0.586144 | 8_1:+1686717 | None:intergenic |
| TATCTATGAGTCAATGAATG+AGG | 0.586376 | 8_1:-1686791 | Msa1171760:CDS |
| GAATTGCACCATTTGGTTGG+GGG | 0.586590 | 8_1:-1688206 | Msa1171760:CDS |
| ACATTATTGAATTCTCAAGC+TGG | 0.587320 | 8_1:+1687400 | None:intergenic |
| TCCGCACAAAGCTCTTGAGT+TGG | 0.592177 | 8_1:-1687655 | Msa1171760:CDS |
| GATCCAAAACTTTGTCTCGA+GGG | 0.596211 | 8_1:+1688257 | None:intergenic |
| TAACTCCAATCAAGTCTCCA+AGG | 0.600870 | 8_1:-1688403 | Msa1171760:CDS |
| GGCCAGGAGAGAGTTCTAGT+GGG | 0.601609 | 8_1:-1688127 | Msa1171760:CDS |
| AGCAGGAATCGAAGCTCAGG+TGG | 0.603399 | 8_1:-1686695 | Msa1171760:CDS |
| GACGAGTGTTATACTTAATG+GGG | 0.604411 | 8_1:-1685575 | Msa1171760:three_prime_UTR |
| GTATGAGGGAGGAAAAGCTC+GGG | 0.605021 | 8_1:-1685857 | Msa1171760:CDS |
| GTATTGCTCTTAATCAACTG+GGG | 0.605860 | 8_1:-1686567 | Msa1171760:CDS |
| GCACGTACGACGCAATTGGA+AGG | 0.606386 | 8_1:-1686417 | Msa1171760:intron |
| GCTGCTGATAGGAGGCTCAT+GGG | 0.606688 | 8_1:-1687192 | Msa1171760:CDS |
| TTGCCATGCTCGCTAAAACA+AGG | 0.608900 | 8_1:+1687124 | None:intergenic |
| AGGAATCGAAGCTCAGGTGG+GGG | 0.609143 | 8_1:-1686692 | Msa1171760:CDS |
| GCAGGAATCGAAGCTCAGGT+GGG | 0.614855 | 8_1:-1686694 | Msa1171760:CDS |
| AGATCCAAAACTTTGTCTCG+AGG | 0.615616 | 8_1:+1688256 | None:intergenic |
| CCACAGAGACGTCAAAGCGT+TGG | 0.622035 | 8_1:-1688368 | Msa1171760:CDS |
| ACGTGGATGATGAAAAGAGA+AGG | 0.622587 | 8_1:-1685821 | Msa1171760:CDS |
| CTGACTTGTATAACAGGACA+GGG | 0.625190 | 8_1:-1686924 | Msa1171760:CDS |
| GCAGTCAACAGATGCCACTT+CGG | 0.626708 | 8_1:+1687080 | None:intergenic |
| AAGCTGGCCCAACATAGCAT+AGG | 0.627553 | 8_1:+1687416 | None:intergenic |
| CAGGAATCGAAGCTCAGGTG+GGG | 0.630903 | 8_1:-1686693 | Msa1171760:CDS |
| TCCAGAGGAGCTTTAGCAGG+AGG | 0.631409 | 8_1:+1687870 | None:intergenic |
| AGCAGCTTCTTCAATAGATG+GGG | 0.635291 | 8_1:+1687209 | None:intergenic |
| AGTATGAGGGAGGAAAAGCT+CGG | 0.639421 | 8_1:-1685858 | Msa1171760:CDS |
| GATTGAGATTCCTGATATCG+GGG | 0.642295 | 8_1:-1687493 | Msa1171760:CDS |
| GAATCATCCAGCAGTAGGGT+CGG | 0.642771 | 8_1:-1686962 | Msa1171760:CDS |
| TTGCCTCACTATATCGACCC+AGG | 0.644043 | 8_1:+1687535 | None:intergenic |
| TATATGAAACGAAACAAAGG+GGG | 0.644259 | 8_1:+1685419 | None:intergenic |
| AAATGGCCAAGAAGCCGAAG+TGG | 0.644324 | 8_1:-1687094 | Msa1171760:CDS |
| CCAACGCTTTGACGTCTCTG+TGG | 0.647529 | 8_1:+1688368 | None:intergenic |
| ATCTGGTAGTAAAAGTCCGG+TGG | 0.648715 | 8_1:-1688006 | Msa1171760:CDS |
| ATTGACACTGACTTTCCCAA+AGG | 0.649299 | 8_1:+1687777 | None:intergenic |
| TGATAAGAAGTTGGATATGG+TGG | 0.651245 | 8_1:-1688072 | Msa1171760:CDS |
| AAACGGGGTTCATGGCGATG+GGG | 0.651726 | 8_1:-1688471 | Msa1171760:CDS |
| CAGCCTGGGTCGATATAGTG+AGG | 0.655422 | 8_1:-1687538 | Msa1171760:CDS |
| GCCAACTCAAGAGCTTTGTG+CGG | 0.657377 | 8_1:+1687654 | None:intergenic |
| GTCTTATATGTGAAACAAAG+GGG | 0.658004 | 8_1:-1687170 | Msa1171760:CDS |
| GGCATCTTTAATTCTCTCAG+AGG | 0.663417 | 8_1:+1688506 | None:intergenic |
| GCCAGGAGAGAGTTCTAGTG+GGG | 0.664478 | 8_1:-1688126 | Msa1171760:CDS |
| ATCCCTGTCTCGATATGACG+AGG | 0.670357 | 8_1:-1687037 | Msa1171760:CDS |
| ATAAAAGTAGAAGAAGCCAA+AGG | 0.672919 | 8_1:-1688871 | Msa1171760:intron |
| TCACCAAGATCAAAACCCAA+AGG | 0.673652 | 8_1:-1687900 | Msa1171760:CDS |
| GCACGTTGTTAGTATGAGGG+AGG | 0.676380 | 8_1:-1685868 | Msa1171760:CDS |
| CAGGCTGCAATATATTGCTG+CGG | 0.679348 | 8_1:+1687554 | None:intergenic |
| ATATATGAAACGAAACAAAG+GGG | 0.685382 | 8_1:+1685418 | None:intergenic |
| GCCGGGAATTGTTACAAACG+GGG | 0.687272 | 8_1:-1688486 | Msa1171760:CDS |
| TAAGGCATAACGCTGCACAC+AGG | 0.688937 | 8_1:+1686540 | None:intergenic |
| CCTTTGAGAAAACAAACTAG+AGG | 0.692430 | 8_1:-1687831 | Msa1171760:CDS |
| AGCCTCGTCATATCGAGACA+GGG | 0.693208 | 8_1:+1687035 | None:intergenic |
| CGGGACAGCGAATCCCGACG+TGG | 0.696066 | 8_1:-1685838 | Msa1171760:CDS |
| ACTCCAGAGGAGATTGCTAG+CGG | 0.697838 | 8_1:-1686832 | Msa1171760:CDS |
| ATATGAAACGAAACAAAGGG+GGG | 0.718488 | 8_1:+1685420 | None:intergenic |
| AATGCCTGGAGTTACTCCAG+AGG | 0.727468 | 8_1:-1686845 | Msa1171760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTTAAATTCATTATTT+TGG | - | chr8_1:1688095-1688114 | Msa1171760:CDS | 10.0% |
| !!! | CGAAAAAAAATTTGTATTTT+TGG | + | chr8_1:1685621-1685640 | None:intergenic | 15.0% |
| !!! | AACTTTTACTAATAAAAAGA+AGG | + | chr8_1:1688082-1688101 | None:intergenic | 15.0% |
| !! | AAAGAATCAAGTTTCTTTAA+AGG | + | chr8_1:1688558-1688577 | None:intergenic | 20.0% |
| !! | ACATTGTGAAAAAAAATGAA+GGG | - | chr8_1:1688594-1688613 | Msa1171760:intron | 20.0% |
| !! | ATGTTGTACACAAAAATAAA+GGG | + | chr8_1:1688787-1688806 | None:intergenic | 20.0% |
| !! | AATGTTGTACACAAAAATAA+AGG | + | chr8_1:1688788-1688807 | None:intergenic | 20.0% |
| !! | TTTGACAATTACATATATGT+TGG | - | chr8_1:1688874-1688893 | Msa1171760:CDS | 20.0% |
| ! | ACTTTGACTATTGCAAATTA+TGG | - | chr8_1:1685391-1685410 | Msa1171760:three_prime_UTR | 25.0% |
| ! | TTTATCTGATGATAAGAAGT+TGG | - | chr8_1:1686149-1686168 | Msa1171760:intron | 25.0% |
| ! | AATTCAAAGAATTCTCCTTT+GGG | - | chr8_1:1686438-1686457 | Msa1171760:CDS | 25.0% |
| ! | CATTCATAGAGAAAATAGTT+CGG | - | chr8_1:1686998-1687017 | Msa1171760:CDS | 25.0% |
| ! | ACAATACCTTGGTAAATTAA+AGG | + | chr8_1:1687916-1687935 | None:intergenic | 25.0% |
| ! | ATGTGAAATGATAACTGATT+CGG | - | chr8_1:1688007-1688026 | Msa1171760:CDS | 25.0% |
| ! | CTTGGATAATCATAATCTAA+AGG | + | chr8_1:1688259-1688278 | None:intergenic | 25.0% |
| ! | GATTATGATTATCCAAGATA+TGG | - | chr8_1:1688262-1688281 | Msa1171760:CDS | 25.0% |
| ! | CACATTGTGAAAAAAAATGA+AGG | - | chr8_1:1688593-1688612 | Msa1171760:intron | 25.0% |
| ! | ATATTGTCTATTAACACTGT+CGG | + | chr8_1:1688631-1688650 | None:intergenic | 25.0% |
| ! | TTATACTTAATGGGGTAAAA+TGG | - | chr8_1:1688663-1688682 | Msa1171760:intron | 25.0% |
| ! | AAAATGGAATCATTGAAAAG+TGG | - | chr8_1:1688679-1688698 | Msa1171760:intron | 25.0% |
| ! | ATATATGAAACGAAACAAAG+GGG | + | chr8_1:1688815-1688834 | None:intergenic | 25.0% |
| ! | CATATATGAAACGAAACAAA+GGG | + | chr8_1:1688816-1688835 | None:intergenic | 25.0% |
| ! | TCATATATGAAACGAAACAA+AGG | + | chr8_1:1688817-1688836 | None:intergenic | 25.0% |
| ATAAAAGTAGAAGAAGCCAA+AGG | - | chr8_1:1685359-1685378 | Msa1171760:three_prime_UTR | 30.0% | |
| ! | TCAAAGTTTTTCTTCACCTT+TGG | + | chr8_1:1685378-1685397 | None:intergenic | 30.0% |
| ACAGACAACATTTGATCAAA+TGG | + | chr8_1:1685530-1685549 | None:intergenic | 30.0% | |
| !! | TGTTTGATATTTGTTGTCAC+AGG | - | chr8_1:1685691-1685710 | Msa1171760:exon | 30.0% |
| ! | TGATGAGTCTAGAATTGATT+CGG | - | chr8_1:1686002-1686021 | Msa1171760:intron | 30.0% |
| TGATGATAAGAAGTTGGATA+TGG | - | chr8_1:1686155-1686174 | Msa1171760:intron | 30.0% | |
| !!! | ACAATTTTTTCTGAGGAAAC+CGG | + | chr8_1:1686276-1686295 | None:intergenic | 30.0% |
| !!! | TGGTTTGACAATTTTTTCTG+AGG | + | chr8_1:1686283-1686302 | None:intergenic | 30.0% |
| AAACAAACTAGAGGAGTTAA+TGG | - | chr8_1:1686408-1686427 | Msa1171760:intron | 30.0% | |
| GAATTCAAAGAATTCTCCTT+TGG | - | chr8_1:1686437-1686456 | Msa1171760:CDS | 30.0% | |
| CTTGCTTGCTTTAGTAATAT+CGG | + | chr8_1:1686531-1686550 | None:intergenic | 30.0% | |
| ATGAAACTGTTTGAGAAGTT+TGG | - | chr8_1:1686609-1686628 | Msa1171760:CDS | 30.0% | |
| ! | TGTTTGAGAAGTTTGGTAAT+GGG | - | chr8_1:1686616-1686635 | Msa1171760:CDS | 30.0% |
| ACATTATTGAATTCTCAAGC+TGG | + | chr8_1:1686833-1686852 | None:intergenic | 30.0% | |
| TTTGCAATTTAATGAAGCAG+AGG | - | chr8_1:1686953-1686972 | Msa1171760:CDS | 30.0% | |
| ! | GGTCTTATATGTGAAACAAA+GGG | - | chr8_1:1687059-1687078 | Msa1171760:CDS | 30.0% |
| GTCTTATATGTGAAACAAAG+GGG | - | chr8_1:1687060-1687079 | Msa1171760:CDS | 30.0% | |
| TATCTATGAGTCAATGAATG+AGG | - | chr8_1:1687439-1687458 | Msa1171760:CDS | 30.0% | |
| ATTAAGAGCAATACCAAAGA+AGG | + | chr8_1:1687657-1687676 | None:intergenic | 30.0% | |
| TAATTCTATAGCTTCCCTTA+AGG | + | chr8_1:1687711-1687730 | None:intergenic | 30.0% | |
| GGAAGCTATAGAATTATTTG+AGG | - | chr8_1:1687715-1687734 | Msa1171760:CDS | 30.0% | |
| !! | AAAAGATTTGCTAGAAGAAG+CGG | + | chr8_1:1687869-1687888 | None:intergenic | 30.0% |
| AAAGATTTCATAGTTCCACA+AGG | + | chr8_1:1688210-1688229 | None:intergenic | 30.0% | |
| TGATTATCCAAGATATGGTT+TGG | - | chr8_1:1688267-1688286 | Msa1171760:CDS | 30.0% | |
| !! | AAGGTTGAGTGATTTGTTAA+AGG | - | chr8_1:1688428-1688447 | Msa1171760:CDS | 30.0% |
| TTTAAACAACCTTGTCATCA+AGG | - | chr8_1:1688518-1688537 | Msa1171760:CDS | 30.0% | |
| ! | CTTTAAAGGAAATCCTTATC+AGG | + | chr8_1:1688544-1688563 | None:intergenic | 30.0% |
| TTGATTCTTTGATGCTTTAC+AGG | - | chr8_1:1688568-1688587 | Msa1171760:intron | 30.0% | |
| TGTGAAAAAAAATGAAGGGA+TGG | - | chr8_1:1688598-1688617 | Msa1171760:intron | 30.0% | |
| GTGAAAAAAAATGAAGGGAT+GGG | - | chr8_1:1688599-1688618 | Msa1171760:intron | 30.0% | |
| TATTGTCTATTAACACTGTC+GGG | + | chr8_1:1688630-1688649 | None:intergenic | 30.0% | |
| TTGACGAGTGTTATACTTAA+TGG | - | chr8_1:1688653-1688672 | Msa1171760:intron | 30.0% | |
| TGACGAGTGTTATACTTAAT+GGG | - | chr8_1:1688654-1688673 | Msa1171760:intron | 30.0% | |
| TATATGAAACGAAACAAAGG+GGG | + | chr8_1:1688814-1688833 | None:intergenic | 30.0% | |
| !!! | TTTTTTCGCCTTCTCTTTGT+TGG | - | chr8_1:1685633-1685652 | Msa1171760:three_prime_UTR | 35.0% |
| !! | ATTTGTTGTCACAGGTATTC+TGG | - | chr8_1:1685699-1685718 | Msa1171760:exon | 35.0% |
| TCTGAGAGAATTAAAGATGC+CGG | - | chr8_1:1685726-1685745 | Msa1171760:CDS | 35.0% | |
| GGAGTTAAACTTTCCTTAGT+GGG | + | chr8_1:1685814-1685833 | None:intergenic | 35.0% | |
| TGGAGTTAAACTTTCCTTAG+TGG | + | chr8_1:1685815-1685834 | None:intergenic | 35.0% | |
| !!! | AGACAAAGTTTTGGATCTGA+CGG | - | chr8_1:1685979-1685998 | Msa1171760:intron | 35.0% |
| TGATAAGAAGTTGGATATGG+TGG | - | chr8_1:1686158-1686177 | Msa1171760:intron | 35.0% | |
| TCAATCTGGTAGTAAAAGTC+CGG | - | chr8_1:1686188-1686207 | Msa1171760:intron | 35.0% | |
| TCAATCTGGTAGTAAAAGTC+CGG | - | chr8_1:1686188-1686207 | Msa1171760:intron | 35.0% | |
| ACGATCTAGTAGTAAAAGTC+CGG | - | chr8_1:1686254-1686273 | Msa1171760:intron | 35.0% | |
| TTGTCAAACCACTGAATTCA+AGG | - | chr8_1:1686292-1686311 | Msa1171760:intron | 35.0% | |
| AAACCACTGAATTCAAGGTT+GGG | - | chr8_1:1686297-1686316 | Msa1171760:intron | 35.0% | |
| !! | TTTCCTTTGGGTTTTGATCT+TGG | + | chr8_1:1686336-1686355 | None:intergenic | 35.0% |
| !!! | CCTCTAGTTTGTTTTCTCAA+AGG | + | chr8_1:1686402-1686421 | None:intergenic | 35.0% |
| ! | CCTTTGAGAAAACAAACTAG+AGG | - | chr8_1:1686399-1686418 | Msa1171760:intron | 35.0% |
| CTGTTTGAGAAGTTTGGTAA+TGG | - | chr8_1:1686615-1686634 | Msa1171760:CDS | 35.0% | |
| CACATAACCAATTCCAAACT+CGG | + | chr8_1:1686645-1686664 | None:intergenic | 35.0% | |
| TCGATTGAGATTCCTGATAT+CGG | - | chr8_1:1686735-1686754 | Msa1171760:CDS | 35.0% | |
| TCAATAATGTTCTACACTGC+TGG | - | chr8_1:1686843-1686862 | Msa1171760:CDS | 35.0% | |
| ! | GGGTCTTATATGTGAAACAA+AGG | - | chr8_1:1687058-1687077 | Msa1171760:CDS | 35.0% |
| ATATATGAGAATCCAATGCC+TGG | - | chr8_1:1687371-1687390 | Msa1171760:CDS | 35.0% | |
| GGGGTTATGTATTACATGTT+GGG | - | chr8_1:1687557-1687576 | Msa1171760:CDS | 35.0% | |
| ATCACAAAACTTCGTGCTAT+TGG | - | chr8_1:1687617-1687636 | Msa1171760:CDS | 35.0% | |
| GAGAAGAAATCATCCTTCTT+TGG | - | chr8_1:1687641-1687660 | Msa1171760:CDS | 35.0% | |
| TGGTATTGCTCTTAATCAAC+TGG | - | chr8_1:1687661-1687680 | Msa1171760:CDS | 35.0% | |
| GGTATTGCTCTTAATCAACT+GGG | - | chr8_1:1687662-1687681 | Msa1171760:CDS | 35.0% | |
| GTATTGCTCTTAATCAACTG+GGG | - | chr8_1:1687663-1687682 | Msa1171760:CDS | 35.0% | |
| !!! | AGTGTTTTGGAACATGAGTT+GGG | - | chr8_1:1687746-1687765 | Msa1171760:CDS | 35.0% |
| TATATACTCCAAGCGTTTCA+GGG | + | chr8_1:1687781-1687800 | None:intergenic | 35.0% | |
| GGAGTATATAGTAATCTTGC+AGG | - | chr8_1:1687791-1687810 | Msa1171760:CDS | 35.0% | |
| ! | TCAGCACCTTTAATTTACCA+AGG | - | chr8_1:1687907-1687926 | Msa1171760:CDS | 35.0% |
| CAGTTATCATTTCACATGAG+TGG | + | chr8_1:1688004-1688023 | None:intergenic | 35.0% | |
| ! | GAAGTTCTTTTCTCCTTACA+GGG | - | chr8_1:1688294-1688313 | Msa1171760:CDS | 35.0% |
| ATAGAAGATCAAACCCTGTA+AGG | + | chr8_1:1688310-1688329 | None:intergenic | 35.0% | |
| AGGGTTTGATCTTCTATTTC+AGG | - | chr8_1:1688313-1688332 | Msa1171760:CDS | 35.0% | |
| TTTGATCTTCTATTTCAGGC+TGG | - | chr8_1:1688317-1688336 | Msa1171760:CDS | 35.0% | |
| GGATGATGCAATTCTAACTT+TGG | - | chr8_1:1688338-1688357 | Msa1171760:CDS | 35.0% | |
| !! | AGTGATTTGTTAAAGGAAGC+CGG | - | chr8_1:1688435-1688454 | Msa1171760:CDS | 35.0% |
| ! | TTTTCTGCTTCGAATTCTAC+CGG | + | chr8_1:1688457-1688476 | None:intergenic | 35.0% |
| ! | TCACTAGAGAACCTTTTTGA+CGG | - | chr8_1:1688483-1688502 | Msa1171760:CDS | 35.0% |
| GACGAGTGTTATACTTAATG+GGG | - | chr8_1:1688655-1688674 | Msa1171760:intron | 35.0% | |
| ATATGAAACGAAACAAAGGG+GGG | + | chr8_1:1688813-1688832 | None:intergenic | 35.0% | |
| ! | CTGTCTGAAACTCTTTGATA+TGG | - | chr8_1:1688844-1688863 | Msa1171760:intron | 35.0% |
| GGCATCTTTAATTCTCTCAG+AGG | + | chr8_1:1685727-1685746 | None:intergenic | 40.0% | |
| CTGAGAGAATTAAAGATGCC+GGG | - | chr8_1:1685727-1685746 | Msa1171760:CDS | 40.0% | |
| ATGCCGGGAATTGTTACAAA+CGG | - | chr8_1:1685742-1685761 | Msa1171760:CDS | 40.0% | |
| ATTGTTACAAACGGGGTTCA+TGG | - | chr8_1:1685751-1685770 | Msa1171760:CDS | 40.0% | |
| TGTGAACAATTCTCCCACTA+AGG | - | chr8_1:1685798-1685817 | Msa1171760:CDS | 40.0% | |
| TAACTCCAATCAAGTCTCCA+AGG | - | chr8_1:1685827-1685846 | Msa1171760:CDS | 40.0% | |
| GTCCTAATTTCCAGGATGAT+GGG | - | chr8_1:1685884-1685903 | Msa1171760:CDS | 40.0% | |
| TCCTAATTTCCAGGATGATG+GGG | - | chr8_1:1685885-1685904 | Msa1171760:CDS | 40.0% | |
| GATCCAAAACTTTGTCTCGA+GGG | + | chr8_1:1685976-1685995 | None:intergenic | 40.0% | |
| AGATCCAAAACTTTGTCTCG+AGG | + | chr8_1:1685977-1685996 | None:intergenic | 40.0% | |
| ! | TGATTCGGAATTGCACCATT+TGG | - | chr8_1:1686017-1686036 | Msa1171760:intron | 40.0% |
| CCAGATTGAATCTCAATCAC+CGG | + | chr8_1:1686210-1686229 | None:intergenic | 40.0% | |
| CAAACCACTGAATTCAAGGT+TGG | - | chr8_1:1686296-1686315 | Msa1171760:intron | 40.0% | |
| TCACCAAGATCAAAACCCAA+AGG | - | chr8_1:1686330-1686349 | Msa1171760:intron | 40.0% | |
| TGATCATTCTTTCTCTCCAG+AGG | + | chr8_1:1686378-1686397 | None:intergenic | 40.0% | |
| !! | ATTGACACTGACTTTCCCAA+AGG | + | chr8_1:1686456-1686475 | None:intergenic | 40.0% |
| AATGAGTCGCGTTGAGAATT+CGG | - | chr8_1:1686473-1686492 | Msa1171760:CDS | 40.0% | |
| GCAAGAGATCTTATGTCAAC+TGG | - | chr8_1:1686546-1686565 | Msa1171760:CDS | 40.0% | |
| TCAATCGAACGCTCAAGAAT+GGG | + | chr8_1:1686723-1686742 | None:intergenic | 40.0% | |
| CGATTGAGATTCCTGATATC+GGG | - | chr8_1:1686736-1686755 | Msa1171760:CDS | 40.0% | |
| GATTGAGATTCCTGATATCG+GGG | - | chr8_1:1686737-1686756 | Msa1171760:CDS | 40.0% | |
| CATGCTCTTGCTAAATTTGC+CGG | - | chr8_1:1686771-1686790 | Msa1171760:CDS | 40.0% | |
| !! | TGAAGTCCAGAGGCATATTT+TGG | - | chr8_1:1686869-1686888 | Msa1171760:CDS | 40.0% |
| !! | GAAGTCCAGAGGCATATTTT+GGG | - | chr8_1:1686870-1686889 | Msa1171760:CDS | 40.0% |
| TTTCTCCCAAAATATGCCTC+TGG | + | chr8_1:1686878-1686897 | None:intergenic | 40.0% | |
| GACAAGTTTCACCAACTCTT+GGG | + | chr8_1:1686905-1686924 | None:intergenic | 40.0% | |
| !! | CAAGAGTTGGTGAAACTTGT+CGG | - | chr8_1:1686904-1686923 | Msa1171760:CDS | 40.0% |
| TGGTGAAACTTGTCGGTATT+TGG | - | chr8_1:1686911-1686930 | Msa1171760:CDS | 40.0% | |
| AGCAGCTTCTTCAATAGATG+GGG | + | chr8_1:1687024-1687043 | None:intergenic | 40.0% | |
| CAGCAGCTTCTTCAATAGAT+GGG | + | chr8_1:1687025-1687044 | None:intergenic | 40.0% | |
| TCAGCAGCTTCTTCAATAGA+TGG | + | chr8_1:1687026-1687045 | None:intergenic | 40.0% | |
| CTATTGAAGAAGCTGCTGAT+AGG | - | chr8_1:1687027-1687046 | Msa1171760:CDS | 40.0% | |
| !! | GTTTGGCTGACTTGTATAAC+AGG | - | chr8_1:1687300-1687319 | Msa1171760:CDS | 40.0% |
| ! | CTGACTTGTATAACAGGACA+GGG | - | chr8_1:1687306-1687325 | Msa1171760:CDS | 40.0% |
| TAACAGGACAGGGAAGATAA+AGG | - | chr8_1:1687316-1687335 | Msa1171760:CDS | 40.0% | |
| ! | GTCAATGAATGAGGTTGATC+AGG | - | chr8_1:1687448-1687467 | Msa1171760:CDS | 40.0% |
| ! | CAAGTTACTGCAGAAAGCAT+TGG | - | chr8_1:1687475-1687494 | Msa1171760:CDS | 40.0% |
| GAGATATATAATGATGCCCC+TGG | - | chr8_1:1687497-1687516 | Msa1171760:CDS | 40.0% | |
| GGGGGTTATGTATTACATGT+TGG | - | chr8_1:1687556-1687575 | Msa1171760:CDS | 40.0% | |
| !!! | TGAGGAAGCAAAGAGTGTTT+TGG | - | chr8_1:1687733-1687752 | Msa1171760:CDS | 40.0% |
| !!! | GAGTGTTTTGGAACATGAGT+TGG | - | chr8_1:1687745-1687764 | Msa1171760:CDS | 40.0% |
| !!! | GTGTTTTGGAACATGAGTTG+GGG | - | chr8_1:1687747-1687766 | Msa1171760:CDS | 40.0% |
| CTATATACTCCAAGCGTTTC+AGG | + | chr8_1:1687782-1687801 | None:intergenic | 40.0% | |
| !! | GATAACTGATTCGGCATTCA+TGG | - | chr8_1:1688016-1688035 | Msa1171760:CDS | 40.0% |
| TTCTTGGGGTCTAGTATAAG+TGG | + | chr8_1:1688154-1688173 | None:intergenic | 40.0% | |
| ATACTAGACCCCAAGAAAGA+AGG | - | chr8_1:1688157-1688176 | Msa1171760:CDS | 40.0% | |
| TACTAGACCCCAAGAAAGAA+GGG | - | chr8_1:1688158-1688177 | Msa1171760:CDS | 40.0% | |
| ! | GGAGTTTGATTCACCTTTTG+AGG | - | chr8_1:1688184-1688203 | Msa1171760:CDS | 40.0% |
| TTCGACACCAAACCATATCT+TGG | + | chr8_1:1688277-1688296 | None:intergenic | 40.0% | |
| ! | CGAAGTTCTTTTCTCCTTAC+AGG | - | chr8_1:1688293-1688312 | Msa1171760:CDS | 40.0% |
| ! | TCTCTTTTCATCATCCACGT+CGG | + | chr8_1:1688409-1688428 | None:intergenic | 40.0% |
| ACGTGGATGATGAAAAGAGA+AGG | - | chr8_1:1688409-1688428 | Msa1171760:CDS | 40.0% | |
| GAATTCGAAGCAGAAAAGTC+AGG | - | chr8_1:1688460-1688479 | Msa1171760:CDS | 40.0% | |
| CCACAGATCCAACAAAGAGA+AGG | + | chr8_1:1685644-1685663 | None:intergenic | 45.0% | |
| CCTTCTCTTTGTTGGATCTG+TGG | - | chr8_1:1685641-1685660 | Msa1171760:three_prime_UTR | 45.0% | |
| TCTCTTTGTTGGATCTGTGG+TGG | - | chr8_1:1685644-1685663 | Msa1171760:three_prime_UTR | 45.0% | |
| CTCTTTGTTGGATCTGTGGT+GGG | - | chr8_1:1685645-1685664 | Msa1171760:three_prime_UTR | 45.0% | |
| TGCCGGGAATTGTTACAAAC+GGG | - | chr8_1:1685743-1685762 | Msa1171760:CDS | 45.0% | |
| ACCCCGTTTGTAACAATTCC+CGG | + | chr8_1:1685748-1685767 | None:intergenic | 45.0% | |
| GAACTCCTTGGAGACTTGAT+TGG | + | chr8_1:1685835-1685854 | None:intergenic | 45.0% | |
| TGTGGACTCATTGAACTCCT+TGG | + | chr8_1:1685847-1685866 | None:intergenic | 45.0% | |
| !! | AAGCGTTGGTCCTAATTTCC+AGG | - | chr8_1:1685876-1685895 | Msa1171760:CDS | 45.0% |
| GGTCCTAATTTCCAGGATGA+TGG | - | chr8_1:1685883-1685902 | Msa1171760:CDS | 45.0% | |
| ACCCCATCATCCTGGAAATT+AGG | + | chr8_1:1685889-1685908 | None:intergenic | 45.0% | |
| TCATAAAGCTGCTCGATCGA+AGG | + | chr8_1:1685919-1685938 | None:intergenic | 45.0% | |
| TCGGAATTGCACCATTTGGT+TGG | - | chr8_1:1686021-1686040 | Msa1171760:intron | 45.0% | |
| CGGAATTGCACCATTTGGTT+GGG | - | chr8_1:1686022-1686041 | Msa1171760:intron | 45.0% | |
| GGAATTGCACCATTTGGTTG+GGG | - | chr8_1:1686023-1686042 | Msa1171760:intron | 45.0% | |
| GAATTGCACCATTTGGTTGG+GGG | - | chr8_1:1686024-1686043 | Msa1171760:intron | 45.0% | |
| TCTAGTGGGGAAACATCTTC+TGG | - | chr8_1:1686117-1686136 | Msa1171760:intron | 45.0% | |
| ! | TGGGGAAACATCTTCTGGAA+TGG | - | chr8_1:1686122-1686141 | Msa1171760:intron | 45.0% |
| !! | GGGGAAACATCTTCTGGAAT+GGG | - | chr8_1:1686123-1686142 | Msa1171760:intron | 45.0% |
| ATGGTGGCTGAGATTCAATC+TGG | - | chr8_1:1686174-1686193 | Msa1171760:intron | 45.0% | |
| CCGGTGATTGAGATTCAATC+TGG | - | chr8_1:1686207-1686226 | Msa1171760:intron | 45.0% | |
| ATCTGGTAGTAAAAGTCCGG+TGG | - | chr8_1:1686191-1686210 | Msa1171760:intron | 45.0% | |
| CTAGATCGTGTCTTAACCAC+CGG | + | chr8_1:1686243-1686262 | None:intergenic | 45.0% | |
| !! | GCAGGAGGACTTTTTCCTTT+GGG | + | chr8_1:1686348-1686367 | None:intergenic | 45.0% |
| !! | AGCAGGAGGACTTTTTCCTT+TGG | + | chr8_1:1686349-1686368 | None:intergenic | 45.0% |
| CAGGCTGCAATATATTGCTG+CGG | + | chr8_1:1686679-1686698 | None:intergenic | 45.0% | |
| GCAGCAATATATTGCAGCCT+GGG | - | chr8_1:1686678-1686697 | Msa1171760:CDS | 45.0% | |
| CTCAATCGAACGCTCAAGAA+TGG | + | chr8_1:1686724-1686743 | None:intergenic | 45.0% | |
| !! | TGTTGACTTTCCCCGATATC+AGG | + | chr8_1:1686750-1686769 | None:intergenic | 45.0% |
| TGGAGACACCTATGCTATGT+TGG | - | chr8_1:1686806-1686825 | Msa1171760:CDS | 45.0% | |
| GGAGACACCTATGCTATGTT+GGG | - | chr8_1:1686807-1686826 | Msa1171760:CDS | 45.0% | |
| CGACAAGTTTCACCAACTCT+TGG | + | chr8_1:1686906-1686925 | None:intergenic | 45.0% | |
| AGCAGAGGAGATCTGTCAAA+TGG | - | chr8_1:1686968-1686987 | Msa1171760:CDS | 45.0% | |
| TTGAAGAAGCTGCTGATAGG+AGG | - | chr8_1:1687030-1687049 | Msa1171760:CDS | 45.0% | |
| !!! | ACACCTTGTTTTAGCGAGCA+TGG | - | chr8_1:1687103-1687122 | Msa1171760:CDS | 45.0% |
| TTGCCATGCTCGCTAAAACA+AGG | + | chr8_1:1687109-1687128 | None:intergenic | 45.0% | |
| !!! | TGTTTTAGCGAGCATGGCAA+TGG | - | chr8_1:1687109-1687128 | Msa1171760:CDS | 45.0% |
| AGCATGGCAATGGTTGCAAA+TGG | - | chr8_1:1687119-1687138 | Msa1171760:CDS | 45.0% | |
| !! | GCAGTTTTCAAGACCAGCAA+AGG | - | chr8_1:1687242-1687261 | Msa1171760:CDS | 45.0% |
| TGGATGATTCTCTCCTTTGC+TGG | + | chr8_1:1687258-1687277 | None:intergenic | 45.0% | |
| GAGAGAATCATCCAGCAGTA+GGG | - | chr8_1:1687264-1687283 | Msa1171760:CDS | 45.0% | |
| !! | GCTGACTTGTATAACAGGAC+AGG | - | chr8_1:1687305-1687324 | Msa1171760:CDS | 45.0% |
| TATTGTTCCTTGCTGACCAG+GGG | + | chr8_1:1687516-1687535 | None:intergenic | 45.0% | |
| CTATTGTTCCTTGCTGACCA+GGG | + | chr8_1:1687517-1687536 | None:intergenic | 45.0% | |
| AATAGCAGGAATCGAAGCTC+AGG | - | chr8_1:1687532-1687551 | Msa1171760:CDS | 45.0% | |
| TGTGCAGCGTTATGCCTTAA+GGG | - | chr8_1:1687694-1687713 | Msa1171760:CDS | 45.0% | |
| GAAGAAGCGGAAACACAGAA+GGG | + | chr8_1:1687856-1687875 | None:intergenic | 45.0% | |
| AGAAGAAGCGGAAACACAGA+AGG | + | chr8_1:1687857-1687876 | None:intergenic | 45.0% | |
| !! | ACCAAGGTATTGTGTGAAGC+AGG | - | chr8_1:1687923-1687942 | Msa1171760:CDS | 45.0% |
| TGGGGTCTAGTATAAGTGGT+TGG | + | chr8_1:1688150-1688169 | None:intergenic | 45.0% | |
| !!! | ATTCACCTTTTGAGGCCTTG+TGG | - | chr8_1:1688192-1688211 | Msa1171760:CDS | 45.0% |
| TAGTTCCACAAGGCCTCAAA+AGG | + | chr8_1:1688200-1688219 | None:intergenic | 45.0% | |
| TGGAGCACGTTGTTAGTATG+AGG | - | chr8_1:1688358-1688377 | Msa1171760:CDS | 45.0% | |
| GGAGCACGTTGTTAGTATGA+GGG | - | chr8_1:1688359-1688378 | Msa1171760:CDS | 45.0% | |
| AGTATGAGGGAGGAAAAGCT+CGG | - | chr8_1:1688372-1688391 | Msa1171760:CDS | 45.0% | |
| ! | CTCTTTTCATCATCCACGTC+GGG | + | chr8_1:1688408-1688427 | None:intergenic | 45.0% |
| ! | CTTATCAGGCCTTGATGACA+AGG | + | chr8_1:1688530-1688549 | None:intergenic | 45.0% |
| CTTGTCATCAAGGCCTGATA+AGG | - | chr8_1:1688528-1688547 | Msa1171760:intron | 45.0% | |
| GCCGGGAATTGTTACAAACG+GGG | - | chr8_1:1685744-1685763 | Msa1171760:CDS | 50.0% | |
| ! | TCGCCCTCGAGACAAAGTTT+TGG | - | chr8_1:1685970-1685989 | Msa1171760:intron | 50.0% |
| GATGAGGGAGCTGGAGATAA+TGG | - | chr8_1:1686050-1686069 | Msa1171760:intron | 50.0% | |
| !! | GGAGCTGGAGATAATGGAAG+AGG | - | chr8_1:1686056-1686075 | Msa1171760:intron | 50.0% |
| !! | GCTGGAGATAATGGAAGAGG+AGG | - | chr8_1:1686059-1686078 | Msa1171760:intron | 50.0% |
| !! | GGAGATAATGGAAGAGGAGG+TGG | - | chr8_1:1686062-1686081 | Msa1171760:intron | 50.0% |
| !! | GATAATGGAAGAGGAGGTGG+AGG | - | chr8_1:1686065-1686084 | Msa1171760:intron | 50.0% |
| GAGCCCAACCTTGAATTCAG+TGG | + | chr8_1:1686303-1686322 | None:intergenic | 50.0% | |
| ! | AGTAATATCGGTGCTCGCTC+TGG | + | chr8_1:1686519-1686538 | None:intergenic | 50.0% |
| TCCGCACAAAGCTCTTGAGT+TGG | - | chr8_1:1686575-1686594 | Msa1171760:CDS | 50.0% | |
| ! | GCCAACTCAAGAGCTTTGTG+CGG | + | chr8_1:1686579-1686598 | None:intergenic | 50.0% |
| !! | TGGTAATGGGAAGCCGAGTT+TGG | - | chr8_1:1686629-1686648 | Msa1171760:CDS | 50.0% |
| ! | TGGGAAGCCGAGTTTGGAAT+TGG | - | chr8_1:1686635-1686654 | Msa1171760:CDS | 50.0% |
| CGCAGCAATATATTGCAGCC+TGG | - | chr8_1:1686677-1686696 | Msa1171760:CDS | 50.0% | |
| TTGCCTCACTATATCGACCC+AGG | + | chr8_1:1686698-1686717 | None:intergenic | 50.0% | |
| TTTGCCGGTCACATGCAACT+TGG | - | chr8_1:1686786-1686805 | Msa1171760:CDS | 50.0% | |
| GTCTCCAAGTTGCATGTGAC+CGG | + | chr8_1:1686793-1686812 | None:intergenic | 50.0% | |
| AAGCTGGCCCAACATAGCAT+AGG | + | chr8_1:1686817-1686836 | None:intergenic | 50.0% | |
| !!! | CTGCTGGTTTTGAAGTCCAG+AGG | - | chr8_1:1686859-1686878 | Msa1171760:CDS | 50.0% |
| GGAGAAACAGACCCAAGAGT+TGG | - | chr8_1:1686891-1686910 | Msa1171760:CDS | 50.0% | |
| AAATGGCCAAGAAGCCGAAG+TGG | - | chr8_1:1687136-1687155 | Msa1171760:CDS | 50.0% | |
| ! | GCAGTCAACAGATGCCACTT+CGG | + | chr8_1:1687153-1687172 | None:intergenic | 50.0% |
| ! | GCATCTGTTGACTGCAGCAT+TGG | - | chr8_1:1687158-1687177 | Msa1171760:CDS | 50.0% |
| ATCCCTGTCTCGATATGACG+AGG | - | chr8_1:1687193-1687212 | Msa1171760:CDS | 50.0% | |
| AGCCTCGTCATATCGAGACA+GGG | + | chr8_1:1687198-1687217 | None:intergenic | 50.0% | |
| GGAGAGAATCATCCAGCAGT+AGG | - | chr8_1:1687263-1687282 | Msa1171760:CDS | 50.0% | |
| GAATCATCCAGCAGTAGGGT+CGG | - | chr8_1:1687268-1687287 | Msa1171760:CDS | 50.0% | |
| AGGGTCGGTCTTTGTACGTT+TGG | - | chr8_1:1687283-1687302 | Msa1171760:CDS | 50.0% | |
| ! | TCTGGAGTAACTCCAGGCAT+TGG | + | chr8_1:1687386-1687405 | None:intergenic | 50.0% |
| AATGCCTGGAGTTACTCCAG+AGG | - | chr8_1:1687385-1687404 | Msa1171760:CDS | 50.0% | |
| !! | ATCTCCTCTGGAGTAACTCC+AGG | + | chr8_1:1687392-1687411 | None:intergenic | 50.0% |
| ACTCCAGAGGAGATTGCTAG+CGG | - | chr8_1:1687398-1687417 | Msa1171760:CDS | 50.0% | |
| GCTATTGTTCCTTGCTGACC+AGG | + | chr8_1:1687518-1687537 | None:intergenic | 50.0% | |
| GGTCAGCAAGGAACAATAGC+AGG | - | chr8_1:1687518-1687537 | Msa1171760:CDS | 50.0% | |
| TAAGGCATAACGCTGCACAC+AGG | + | chr8_1:1687693-1687712 | None:intergenic | 50.0% | |
| GTGTGCAGCGTTATGCCTTA+AGG | - | chr8_1:1687693-1687712 | Msa1171760:CDS | 50.0% | |
| CCAAGCGTTTCAGGGTGATA+AGG | + | chr8_1:1687773-1687792 | None:intergenic | 50.0% | |
| CCTTATCACCCTGAAACGCT+TGG | - | chr8_1:1687770-1687789 | Msa1171760:CDS | 50.0% | |
| GCCTGCTTCACACAATACCT+TGG | + | chr8_1:1687927-1687946 | None:intergenic | 50.0% | |
| ATGAGTGGCATGACTCGATC+AGG | + | chr8_1:1687989-1688008 | None:intergenic | 50.0% | |
| TAGACCCCAAGAAAGAAGGG+TGG | - | chr8_1:1688161-1688180 | Msa1171760:CDS | 50.0% | |
| AGACCCCAAGAAAGAAGGGT+GGG | - | chr8_1:1688162-1688181 | Msa1171760:CDS | 50.0% | |
| ACTCCCCACCCTTCTTTCTT+GGG | + | chr8_1:1688169-1688188 | None:intergenic | 50.0% | |
| AACTCCCCACCCTTCTTTCT+TGG | + | chr8_1:1688170-1688189 | None:intergenic | 50.0% | |
| GCACGTTGTTAGTATGAGGG+AGG | - | chr8_1:1688362-1688381 | Msa1171760:CDS | 50.0% | |
| GTATGAGGGAGGAAAAGCTC+GGG | - | chr8_1:1688373-1688392 | Msa1171760:CDS | 50.0% | |
| ACAAACGGGGTTCATGGCGA+TGG | - | chr8_1:1685757-1685776 | Msa1171760:CDS | 55.0% | |
| CAAACGGGGTTCATGGCGAT+GGG | - | chr8_1:1685758-1685777 | Msa1171760:CDS | 55.0% | |
| AAACGGGGTTCATGGCGATG+GGG | - | chr8_1:1685759-1685778 | Msa1171760:CDS | 55.0% | |
| CCAACGCTTTGACGTCTCTG+TGG | + | chr8_1:1685865-1685884 | None:intergenic | 55.0% | |
| CCACAGAGACGTCAAAGCGT+TGG | - | chr8_1:1685862-1685881 | Msa1171760:CDS | 55.0% | |
| GCTCAACAACCCCATCATCC+TGG | + | chr8_1:1685897-1685916 | None:intergenic | 55.0% | |
| TGCACCATTTGGTTGGGGGA+CGG | - | chr8_1:1686028-1686047 | Msa1171760:intron | 55.0% | |
| TCATCCGTCCCCCAACCAAA+TGG | + | chr8_1:1686035-1686054 | None:intergenic | 55.0% | |
| ATTTGGTTGGGGGACGGATG+AGG | - | chr8_1:1686034-1686053 | Msa1171760:intron | 55.0% | |
| TTTGGTTGGGGGACGGATGA+GGG | - | chr8_1:1686035-1686054 | Msa1171760:intron | 55.0% | |
| AATGGAAGAGGAGGTGGAGG+TGG | - | chr8_1:1686068-1686087 | Msa1171760:intron | 55.0% | |
| ! | AGGCCAGGAGAGAGTTCTAG+TGG | - | chr8_1:1686102-1686121 | Msa1171760:intron | 55.0% |
| ! | GGCCAGGAGAGAGTTCTAGT+GGG | - | chr8_1:1686103-1686122 | Msa1171760:intron | 55.0% |
| ! | GCCAGGAGAGAGTTCTAGTG+GGG | - | chr8_1:1686104-1686123 | Msa1171760:intron | 55.0% |
| TCCCCACTAGAACTCTCTCC+TGG | + | chr8_1:1686108-1686127 | None:intergenic | 55.0% | |
| TCCTCCTGCTAAAGCTCCTC+TGG | - | chr8_1:1686359-1686378 | Msa1171760:intron | 55.0% | |
| ! | TCCAGAGGAGCTTTAGCAGG+AGG | + | chr8_1:1686363-1686382 | None:intergenic | 55.0% |
| ! | CTCTCCAGAGGAGCTTTAGC+AGG | + | chr8_1:1686366-1686385 | None:intergenic | 55.0% |
| CAGCCTGGGTCGATATAGTG+AGG | - | chr8_1:1686692-1686711 | Msa1171760:CDS | 55.0% | |
| AGCTGCTGATAGGAGGCTCA+TGG | - | chr8_1:1687037-1687056 | Msa1171760:CDS | 55.0% | |
| GCTGCTGATAGGAGGCTCAT+GGG | - | chr8_1:1687038-1687057 | Msa1171760:CDS | 55.0% | |
| ! | CAGATGCCACTTCGGCTTCT+TGG | + | chr8_1:1687145-1687164 | None:intergenic | 55.0% |
| CAGCCTCGTCATATCGAGAC+AGG | + | chr8_1:1687199-1687218 | None:intergenic | 55.0% | |
| ACAAAGACCGACCCTACTGC+TGG | + | chr8_1:1687278-1687297 | None:intergenic | 55.0% | |
| AGACCGCTAGCAATCTCCTC+TGG | + | chr8_1:1687404-1687423 | None:intergenic | 55.0% | |
| AATGATGCCCCTGGTCAGCA+AGG | - | chr8_1:1687506-1687525 | Msa1171760:CDS | 55.0% | |
| AGCAGGAATCGAAGCTCAGG+TGG | - | chr8_1:1687535-1687554 | Msa1171760:CDS | 55.0% | |
| GCAGGAATCGAAGCTCAGGT+GGG | - | chr8_1:1687536-1687555 | Msa1171760:CDS | 55.0% | |
| CAGGAATCGAAGCTCAGGTG+GGG | - | chr8_1:1687537-1687556 | Msa1171760:CDS | 55.0% | |
| AGGAATCGAAGCTCAGGTGG+GGG | - | chr8_1:1687538-1687557 | Msa1171760:CDS | 55.0% | |
| GCACGTACGACGCAATTGGA+AGG | - | chr8_1:1687813-1687832 | Msa1171760:CDS | 55.0% | |
| GACCCCAAGAAAGAAGGGTG+GGG | - | chr8_1:1688163-1688182 | Msa1171760:CDS | 55.0% | |
| CTCCCCACCCTTCTTTCTTG+GGG | + | chr8_1:1688168-1688187 | None:intergenic | 55.0% | |
| GAAGAGGAGGTGGAGGTGGA+GGG | - | chr8_1:1686072-1686091 | Msa1171760:intron | 60.0% | |
| AAGAGGAGGTGGAGGTGGAG+GGG | - | chr8_1:1686073-1686092 | Msa1171760:intron | 60.0% | |
| GCAGGCACGTACGACGCAAT+TGG | - | chr8_1:1687809-1687828 | Msa1171760:CDS | 60.0% | |
| ! | TGCGAGCGTCGCCGTCAAAA+AGG | + | chr8_1:1688497-1688516 | None:intergenic | 60.0% |
| GGAAGAGGAGGTGGAGGTGG+AGG | - | chr8_1:1686071-1686090 | Msa1171760:intron | 65.0% | |
| AGAGGAGGTGGAGGTGGAGG+GGG | - | chr8_1:1686074-1686093 | Msa1171760:intron | 65.0% | |
| TGGAGGTGGAGGGGGGAAGA+AGG | - | chr8_1:1686082-1686101 | Msa1171760:intron | 65.0% | |
| TGGGGGACGGATGAGGGAGC+TGG | - | chr8_1:1686041-1686060 | Msa1171760:intron | 70.0% | |
| GAGGAGGTGGAGGTGGAGGG+GGG | - | chr8_1:1686075-1686094 | Msa1171760:intron | 70.0% | |
| GTGGAGGGGGGAAGAAGGCC+AGG | - | chr8_1:1686087-1686106 | Msa1171760:intron | 70.0% | |
| CGGGACAGCGAATCCCGACG+TGG | - | chr8_1:1688392-1688411 | Msa1171760:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 1685329 | 1688923 | 1685329 | ID=Msa1171760;Name=Msa1171760 |
| chr8_1 | mRNA | 1685329 | 1688923 | 1685329 | ID=Msa1171760-mRNA-1;Parent=Msa1171760;Name=Msa1171760-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.5|0.33|1|1|1|3|378|794 |
| chr8_1 | exon | 1685329 | 1685917 | 1685329 | ID=Msa1171760-mRNA-1:exon:615;Parent=Msa1171760-mRNA-1 |
| chr8_1 | exon | 1686418 | 1688539 | 1686418 | ID=Msa1171760-mRNA-1:exon:614;Parent=Msa1171760-mRNA-1 |
| chr8_1 | exon | 1688872 | 1688923 | 1688872 | ID=Msa1171760-mRNA-1:exon:613;Parent=Msa1171760-mRNA-1 |
| chr8_1 | CDS | 1688872 | 1688923 | 1688872 | ID=Msa1171760-mRNA-1:cds;Parent=Msa1171760-mRNA-1 |
| chr8_1 | CDS | 1686418 | 1688539 | 1686418 | ID=Msa1171760-mRNA-1:cds;Parent=Msa1171760-mRNA-1 |
| chr8_1 | CDS | 1685707 | 1685917 | 1685707 | ID=Msa1171760-mRNA-1:cds;Parent=Msa1171760-mRNA-1 |
| chr8_1 | three_prime_UTR | 1685329 | 1685706 | 1685329 | ID=Msa1171760-mRNA-1:three_prime_utr;Parent=Msa1171760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
