Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128260 | XP_024625358.1 | 98.171 | 164 | 3 | 0 | 12 | 175 | 1 | 164 | 3.60e-116 | 336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128260 | sp|Q9QYI7|DNJB8_MOUSE | 60.606 | 66 | 23 | 1 | 28 | 93 | 4 | 66 | 6.85e-21 | 88.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128260 | G7KWI3 | 98.171 | 164 | 3 | 0 | 12 | 175 | 1 | 164 | 1.72e-116 | 336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001810 | Msa1128260 | 0.841127 | 5.736731e-58 | -8.615850e-47 |
| Msa0024940 | Msa1128260 | 0.832739 | 7.960561e-56 | -8.615850e-47 |
| Msa0072430 | Msa1128260 | 0.821949 | 3.075647e-53 | -8.615850e-47 |
| Msa0074100 | Msa1128260 | 0.831012 | 2.124207e-55 | -8.615850e-47 |
| Msa0120870 | Msa1128260 | 0.829479 | 5.029741e-55 | -8.615850e-47 |
| Msa0166800 | Msa1128260 | 0.810783 | 9.709461e-51 | -8.615850e-47 |
| Msa0213980 | Msa1128260 | 0.811686 | 6.183870e-51 | -8.615850e-47 |
| Msa0376700 | Msa1128260 | 0.866460 | 2.806512e-65 | -8.615850e-47 |
| Msa0387830 | Msa1128260 | 0.813037 | 3.134441e-51 | -8.615850e-47 |
| Msa0420790 | Msa1128260 | 0.805522 | 1.281801e-49 | -8.615850e-47 |
| Msa0425830 | Msa1128260 | 0.856773 | 2.564270e-62 | -8.615850e-47 |
| Msa0438470 | Msa1128260 | 0.827624 | 1.411910e-54 | -8.615850e-47 |
| Msa0472290 | Msa1128260 | 0.821690 | 3.531645e-53 | -8.615850e-47 |
| Msa1039820 | Msa1128260 | 0.951033 | 4.782167e-109 | -8.615850e-47 |
| Msa1084030 | Msa1128260 | 0.855011 | 8.396945e-62 | -8.615850e-47 |
| Msa0254340 | Msa1128260 | 0.818489 | 1.908600e-52 | -8.615850e-47 |
| Msa0332410 | Msa1128260 | 0.801765 | 7.715853e-49 | -8.615850e-47 |
| Msa1128260 | Msa1411850 | 0.864651 | 1.043034e-64 | -8.615850e-47 |
| Msa1128260 | Msa1466740 | 0.813231 | 2.842423e-51 | -8.615850e-47 |
| Msa0512350 | Msa1128260 | 0.813803 | 2.127450e-51 | -8.615850e-47 |
| Msa0574910 | Msa1128260 | 0.827773 | 1.299970e-54 | -8.615850e-47 |
| Msa0930760 | Msa1128260 | 0.844083 | 9.416331e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128260 | MtrunA17_Chr7g0271891 | 98.171 | 164 | 3 | 0 | 12 | 175 | 1 | 164 | 3.31e-120 | 336 |
| Msa1128260 | MtrunA17_Chr4g0044331 | 60.360 | 111 | 42 | 1 | 33 | 141 | 18 | 128 | 1.87e-41 | 136 |
| Msa1128260 | MtrunA17_Chr8g0344721 | 45.113 | 133 | 66 | 4 | 19 | 145 | 2 | 133 | 2.97e-32 | 115 |
| Msa1128260 | MtrunA17_Chr3g0138471 | 53.030 | 66 | 28 | 1 | 28 | 93 | 5 | 67 | 9.83e-19 | 81.6 |
| Msa1128260 | MtrunA17_Chr2g0324921 | 53.030 | 66 | 28 | 1 | 28 | 93 | 5 | 67 | 1.28e-17 | 78.6 |
| Msa1128260 | MtrunA17_Chr4g0040501 | 48.485 | 66 | 31 | 1 | 28 | 93 | 5 | 67 | 5.89e-17 | 77.0 |
| Msa1128260 | MtrunA17_Chr2g0282741 | 46.970 | 66 | 32 | 1 | 28 | 93 | 5 | 67 | 9.08e-17 | 76.3 |
| Msa1128260 | MtrunA17_Chr4g0006391 | 53.030 | 66 | 28 | 1 | 28 | 93 | 5 | 67 | 1.21e-16 | 75.9 |
| Msa1128260 | MtrunA17_Chr4g0021141 | 45.946 | 74 | 36 | 1 | 20 | 93 | 15 | 84 | 2.68e-16 | 71.6 |
| Msa1128260 | MtrunA17_Chr2g0282761 | 48.485 | 66 | 31 | 1 | 28 | 93 | 5 | 67 | 5.99e-16 | 73.9 |
| Msa1128260 | MtrunA17_Chr4g0061421 | 45.588 | 68 | 37 | 0 | 27 | 94 | 8 | 75 | 6.00e-16 | 74.7 |
| Msa1128260 | MtrunA17_Chr1g0209551 | 40.000 | 90 | 50 | 1 | 12 | 101 | 1 | 86 | 6.37e-16 | 74.3 |
| Msa1128260 | MtrunA17_Chr5g0415731 | 44.286 | 70 | 35 | 1 | 28 | 93 | 6 | 75 | 6.80e-16 | 70.9 |
| Msa1128260 | MtrunA17_Chr7g0263971 | 48.529 | 68 | 32 | 1 | 28 | 95 | 370 | 434 | 6.96e-15 | 71.6 |
| Msa1128260 | MtrunA17_Chr1g0173931 | 41.379 | 87 | 47 | 2 | 7 | 93 | 18 | 100 | 1.99e-14 | 69.3 |
| Msa1128260 | MtrunA17_Chr3g0123861 | 50.000 | 66 | 28 | 2 | 28 | 93 | 83 | 143 | 2.81e-14 | 69.7 |
| Msa1128260 | MtrunA17_Chr6g0460461 | 44.776 | 67 | 36 | 1 | 28 | 93 | 3 | 69 | 3.59e-14 | 67.8 |
| Msa1128260 | MtrunA17_Chr7g0258061 | 50.769 | 65 | 28 | 2 | 29 | 93 | 24 | 84 | 5.87e-14 | 67.8 |
| Msa1128260 | MtrunA17_Chr7g0269841 | 48.485 | 66 | 30 | 2 | 28 | 93 | 27 | 88 | 3.47e-13 | 66.2 |
| Msa1128260 | MtrunA17_Chr6g0478651 | 46.970 | 66 | 30 | 2 | 28 | 93 | 69 | 129 | 4.99e-13 | 66.2 |
| Msa1128260 | MtrunA17_Chr8g0378161 | 46.970 | 66 | 33 | 1 | 28 | 93 | 61 | 124 | 1.04e-12 | 63.2 |
| Msa1128260 | MtrunA17_Chr6g0460381 | 43.284 | 67 | 37 | 1 | 28 | 93 | 4 | 70 | 1.10e-12 | 63.5 |
| Msa1128260 | MtrunA17_Chr4g0010781 | 48.485 | 66 | 30 | 1 | 28 | 93 | 87 | 148 | 1.50e-12 | 64.7 |
| Msa1128260 | MtrunA17_Chr5g0427221 | 43.836 | 73 | 37 | 1 | 23 | 95 | 44 | 112 | 1.75e-12 | 61.6 |
| Msa1128260 | MtrunA17_Chr6g0460411 | 43.284 | 67 | 37 | 1 | 28 | 93 | 3 | 69 | 1.89e-12 | 63.2 |
| Msa1128260 | MtrunA17_Chr3g0087741 | 46.970 | 66 | 31 | 1 | 28 | 93 | 90 | 151 | 1.99e-12 | 64.3 |
| Msa1128260 | MtrunA17_Chr2g0333221 | 46.377 | 69 | 32 | 2 | 25 | 93 | 68 | 131 | 2.64e-12 | 63.9 |
| Msa1128260 | MtrunA17_Chr5g0414471 | 37.975 | 79 | 45 | 1 | 29 | 107 | 27 | 101 | 3.66e-12 | 63.5 |
| Msa1128260 | MtrunA17_Chr5g0426951 | 43.939 | 66 | 33 | 1 | 28 | 93 | 84 | 145 | 5.04e-12 | 63.2 |
| Msa1128260 | MtrunA17_Chr8g0334811 | 39.080 | 87 | 45 | 1 | 16 | 102 | 3 | 81 | 1.40e-11 | 62.0 |
| Msa1128260 | MtrunA17_Chr4g0038931 | 41.463 | 82 | 32 | 1 | 29 | 94 | 956 | 1037 | 4.86e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128260 | AT1G56300.1 | 71.069 | 159 | 43 | 2 | 12 | 170 | 1 | 156 | 2.89e-71 | 212 |
| Msa1128260 | AT1G56300.2 | 77.679 | 112 | 22 | 2 | 12 | 123 | 1 | 109 | 1.52e-52 | 164 |
| Msa1128260 | AT1G71000.1 | 51.748 | 143 | 53 | 4 | 21 | 150 | 3 | 142 | 1.20e-39 | 132 |
| Msa1128260 | AT1G71000.2 | 44.025 | 159 | 80 | 4 | 21 | 174 | 3 | 157 | 1.04e-37 | 127 |
| Msa1128260 | AT3G14200.1 | 47.967 | 123 | 58 | 3 | 29 | 146 | 14 | 135 | 1.55e-32 | 116 |
| Msa1128260 | AT1G72416.1 | 40.816 | 98 | 56 | 2 | 29 | 126 | 7 | 102 | 2.07e-22 | 89.0 |
| Msa1128260 | AT1G72416.2 | 40.816 | 98 | 56 | 2 | 29 | 126 | 7 | 102 | 2.62e-22 | 89.0 |
| Msa1128260 | AT1G72416.3 | 40.816 | 98 | 56 | 2 | 29 | 126 | 7 | 102 | 5.42e-22 | 88.6 |
| Msa1128260 | AT1G72416.4 | 42.222 | 90 | 50 | 2 | 29 | 118 | 7 | 94 | 2.00e-21 | 86.7 |
| Msa1128260 | AT5G25530.2 | 37.594 | 133 | 67 | 3 | 28 | 160 | 5 | 121 | 2.09e-19 | 84.0 |
| Msa1128260 | AT1G10350.1 | 50.000 | 66 | 30 | 1 | 28 | 93 | 5 | 67 | 2.47e-17 | 78.2 |
| Msa1128260 | AT3G08910.1 | 53.030 | 66 | 28 | 1 | 28 | 93 | 5 | 67 | 3.18e-17 | 77.8 |
| Msa1128260 | AT4G28480.2 | 53.030 | 66 | 28 | 1 | 28 | 93 | 5 | 67 | 3.71e-17 | 77.4 |
| Msa1128260 | AT4G28480.1 | 53.030 | 66 | 28 | 1 | 28 | 93 | 5 | 67 | 5.78e-17 | 77.4 |
| Msa1128260 | AT1G59725.1 | 52.239 | 67 | 28 | 2 | 28 | 93 | 5 | 68 | 6.51e-17 | 77.0 |
| Msa1128260 | AT5G25530.1 | 35.461 | 141 | 67 | 4 | 28 | 160 | 5 | 129 | 1.02e-16 | 76.6 |
| Msa1128260 | AT2G20560.1 | 53.030 | 66 | 28 | 1 | 28 | 93 | 5 | 67 | 1.44e-16 | 76.3 |
| Msa1128260 | AT5G01390.3 | 50.000 | 66 | 30 | 1 | 28 | 93 | 5 | 67 | 3.44e-16 | 73.9 |
| Msa1128260 | AT5G01390.2 | 50.000 | 66 | 30 | 1 | 28 | 93 | 5 | 67 | 4.76e-16 | 73.9 |
| Msa1128260 | AT5G01390.4 | 50.000 | 66 | 30 | 1 | 28 | 93 | 5 | 67 | 6.00e-16 | 73.2 |
| Msa1128260 | AT5G01390.1 | 50.000 | 66 | 30 | 1 | 28 | 93 | 5 | 67 | 9.52e-16 | 73.9 |
| Msa1128260 | AT5G06910.1 | 43.956 | 91 | 42 | 2 | 3 | 93 | 10 | 91 | 1.95e-15 | 72.4 |
| Msa1128260 | AT3G47940.1 | 49.254 | 67 | 30 | 2 | 28 | 93 | 5 | 68 | 4.02e-15 | 72.0 |
| Msa1128260 | AT2G33735.1 | 38.298 | 94 | 54 | 1 | 28 | 121 | 23 | 112 | 1.85e-14 | 66.6 |
| Msa1128260 | AT2G33735.2 | 38.298 | 94 | 54 | 1 | 28 | 121 | 23 | 112 | 1.85e-14 | 66.6 |
| Msa1128260 | AT2G41000.1 | 43.478 | 69 | 38 | 1 | 28 | 95 | 4 | 72 | 2.14e-14 | 68.2 |
| Msa1128260 | AT5G16650.1 | 37.864 | 103 | 59 | 2 | 20 | 121 | 4 | 102 | 2.43e-14 | 66.6 |
| Msa1128260 | AT5G03160.1 | 45.205 | 73 | 37 | 1 | 23 | 95 | 366 | 435 | 4.04e-14 | 69.7 |
| Msa1128260 | AT2G41000.2 | 43.478 | 69 | 38 | 1 | 28 | 95 | 4 | 72 | 4.09e-14 | 67.8 |
| Msa1128260 | AT2G22360.1 | 48.485 | 66 | 29 | 2 | 28 | 93 | 87 | 147 | 7.20e-14 | 68.9 |
| Msa1128260 | AT3G12170.1 | 44.000 | 75 | 38 | 1 | 19 | 93 | 3 | 73 | 7.58e-14 | 67.8 |
| Msa1128260 | AT1G24120.1 | 37.975 | 79 | 45 | 1 | 29 | 107 | 22 | 96 | 7.95e-14 | 68.9 |
| Msa1128260 | AT5G16650.2 | 37.864 | 103 | 59 | 2 | 20 | 121 | 4 | 102 | 9.59e-14 | 65.9 |
| Msa1128260 | AT1G74250.1 | 41.026 | 78 | 45 | 1 | 18 | 94 | 2 | 79 | 1.28e-13 | 68.2 |
| Msa1128260 | AT1G68370.1 | 42.466 | 73 | 38 | 1 | 29 | 101 | 19 | 87 | 3.01e-13 | 67.0 |
| Msa1128260 | AT3G12170.2 | 44.000 | 75 | 38 | 1 | 19 | 93 | 39 | 109 | 3.10e-13 | 66.6 |
| Msa1128260 | AT4G39960.1 | 48.485 | 66 | 29 | 2 | 28 | 93 | 86 | 146 | 1.02e-12 | 65.5 |
| Msa1128260 | AT4G39960.2 | 48.485 | 66 | 29 | 2 | 28 | 93 | 86 | 146 | 1.02e-12 | 65.5 |
| Msa1128260 | AT3G62600.1 | 48.485 | 66 | 30 | 1 | 28 | 93 | 27 | 88 | 1.79e-12 | 64.7 |
| Msa1128260 | AT5G12430.1 | 46.154 | 91 | 27 | 4 | 29 | 103 | 1026 | 1110 | 4.94e-12 | 63.9 |
| Msa1128260 | AT1G59980.1 | 43.077 | 65 | 33 | 1 | 29 | 93 | 25 | 85 | 1.13e-11 | 62.4 |
| Msa1128260 | AT1G59980.2 | 43.077 | 65 | 33 | 1 | 29 | 93 | 25 | 85 | 1.15e-11 | 62.4 |
| Msa1128260 | AT5G48030.1 | 38.667 | 75 | 42 | 1 | 28 | 102 | 95 | 165 | 1.54e-11 | 62.0 |
| Msa1128260 | AT1G80030.4 | 42.424 | 66 | 33 | 2 | 28 | 93 | 76 | 136 | 3.50e-11 | 61.2 |
| Msa1128260 | AT1G80030.2 | 42.424 | 66 | 33 | 2 | 28 | 93 | 76 | 136 | 4.19e-11 | 60.8 |
| Msa1128260 | AT1G80030.3 | 42.424 | 66 | 33 | 2 | 28 | 93 | 76 | 136 | 4.19e-11 | 60.8 |
| Msa1128260 | AT1G80030.1 | 42.424 | 66 | 33 | 2 | 28 | 93 | 76 | 136 | 4.19e-11 | 60.8 |
| Msa1128260 | AT2G21510.3 | 41.429 | 70 | 37 | 1 | 24 | 93 | 3 | 68 | 6.09e-11 | 60.5 |
| Msa1128260 | AT2G21510.1 | 41.429 | 70 | 37 | 1 | 24 | 93 | 3 | 68 | 6.09e-11 | 60.5 |
| Msa1128260 | AT2G21510.2 | 41.429 | 70 | 37 | 1 | 24 | 93 | 3 | 68 | 7.08e-11 | 60.1 |
| Msa1128260 | AT2G21510.4 | 41.429 | 70 | 37 | 1 | 24 | 93 | 3 | 68 | 7.08e-11 | 60.1 |
| Msa1128260 | AT2G21510.5 | 41.429 | 70 | 37 | 1 | 24 | 93 | 3 | 68 | 7.64e-11 | 60.1 |
Find 48 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCTATTACTCTGTTCT+TGG | 0.198681 | 7_3:+80118567 | Msa1128260:CDS |
| GGATTTCGAGCGAATTTATC+AGG | 0.209743 | 7_3:-80118744 | None:intergenic |
| CAAATTCAAGAAGCATATTC+AGG | 0.256213 | 7_3:+80118801 | Msa1128260:CDS |
| TTGGCTTCTCCGGCAGTTGT+AGG | 0.330200 | 7_3:-80118765 | None:intergenic |
| TCTTCCCAGCCGTCTGATCT+TGG | 0.344100 | 7_3:-80119646 | None:intergenic |
| GCGGCAATGATTGCTGCGCT+TGG | 0.404589 | 7_3:-80119702 | None:intergenic |
| AATTTGCTGAAACCGTCGTT+TGG | 0.414220 | 7_3:-80118784 | None:intergenic |
| CCTTCCTGCCCATAAAATAA+AGG | 0.442744 | 7_3:+80119865 | Msa1128260:three_prime_UTR |
| TGCATTAAGAAATGAAGAAA+AGG | 0.443910 | 7_3:-80119768 | None:intergenic |
| GTTGAGATGGTAGGTGGAGA+TGG | 0.451612 | 7_3:+80119605 | Msa1128260:CDS |
| TTGCCGCTAGCGTGGTGTAC+TGG | 0.463060 | 7_3:+80119718 | Msa1128260:exon |
| ACAAAGGATGTTTGTTGAGA+TGG | 0.470153 | 7_3:+80119592 | Msa1128260:CDS |
| AAACCGTCGTTTGGCTTCTC+CGG | 0.481969 | 7_3:-80118775 | None:intergenic |
| CCTTCTTGATCCATCACCGT+TGG | 0.486869 | 7_3:-80118516 | None:intergenic |
| TTGAACCAAGATCAGACGGC+TGG | 0.499992 | 7_3:+80119641 | Msa1128260:CDS |
| AAAAGATCAATGTACGATGC+TGG | 0.500396 | 7_3:+80118934 | Msa1128260:CDS |
| TGCTTACCGCAAACTCGCTA+TGG | 0.507423 | 7_3:+80118626 | Msa1128260:CDS |
| GGAGGAGGATCCAACGGTGA+TGG | 0.526876 | 7_3:+80118506 | Msa1128260:intron |
| GATCAGACGGCTGGGAAGAG+AGG | 0.537894 | 7_3:+80119650 | Msa1128260:CDS |
| GTATTACCATAGCGAGTTTG+CGG | 0.546432 | 7_3:-80118632 | None:intergenic |
| GAAAAGGTTTACAAATACAT+AGG | 0.549549 | 7_3:-80119752 | None:intergenic |
| AGTGCGAATATCAGAGGAGG+AGG | 0.553290 | 7_3:-80118604 | None:intergenic |
| ACTTGGTCTTCTTCTTCAAG+AGG | 0.556126 | 7_3:-80118967 | None:intergenic |
| GCTCGAAATCCTACAACTGC+CGG | 0.560164 | 7_3:+80118756 | Msa1128260:CDS |
| GGTTTACAAATACATAGGAT+AGG | 0.565359 | 7_3:-80119747 | None:intergenic |
| GGGAAGAGAGGACGCTCAAG+TGG | 0.569154 | 7_3:+80119662 | Msa1128260:CDS |
| AGCAATCATTGCCGCTAGCG+TGG | 0.577623 | 7_3:+80119710 | Msa1128260:exon |
| TGATTTGAACCAAGATCAGA+CGG | 0.588129 | 7_3:+80119637 | Msa1128260:CDS |
| ATTGAAGTGAAATTCTACAC+AGG | 0.598105 | 7_3:+80119804 | Msa1128260:three_prime_UTR |
| AGAAGATCTACTACCACCGT+TGG | 0.599024 | 7_3:-80118547 | None:intergenic |
| GATGAATAATGTCAAAGATG+AGG | 0.606591 | 7_3:+80119419 | Msa1128260:CDS |
| GATTTCGAGCGAATTTATCA+GGG | 0.606606 | 7_3:-80118743 | None:intergenic |
| TGAACCAAGATCAGACGGCT+GGG | 0.607458 | 7_3:+80119642 | Msa1128260:CDS |
| CAAGAAGGAGGAGGATCCAA+CGG | 0.620400 | 7_3:+80118531 | Msa1128260:CDS |
| GGACGCTCAAGTGGATCAAG+AGG | 0.624597 | 7_3:+80119671 | Msa1128260:CDS |
| ATGTTTGTTGAGATGGTAGG+TGG | 0.628226 | 7_3:+80119599 | Msa1128260:CDS |
| TCATTAGGAGGAGGATCCAA+CGG | 0.632193 | 7_3:+80118500 | Msa1128260:intron |
| GTAAGCAGTGCGAATATCAG+AGG | 0.644250 | 7_3:-80118610 | None:intergenic |
| CCAACGGTGATGGATCAAGA+AGG | 0.647408 | 7_3:+80118516 | Msa1128260:CDS |
| AGGATGTTTGTTGAGATGGT+AGG | 0.652987 | 7_3:+80119596 | Msa1128260:CDS |
| AGCAGTGCGAATATCAGAGG+AGG | 0.654808 | 7_3:-80118607 | None:intergenic |
| GTGATGGATCAAGAAGGAGG+AGG | 0.667540 | 7_3:+80118522 | Msa1128260:CDS |
| TTGAAGTGAAATTCTACACA+GGG | 0.673644 | 7_3:+80119805 | Msa1128260:three_prime_UTR |
| ACGGTGATGGATCAAGAAGG+AGG | 0.684880 | 7_3:+80118519 | Msa1128260:CDS |
| ACAGTTTGGAGGATCTACAA+AGG | 0.691000 | 7_3:+80119576 | Msa1128260:CDS |
| CTGCCGGAGAAGCCAAACGA+CGG | 0.702205 | 7_3:+80118772 | Msa1128260:CDS |
| CATCCAGTACACCACGCTAG+CGG | 0.706919 | 7_3:-80119721 | None:intergenic |
| GAAGGAGGAGGATCCAACGG+TGG | 0.737111 | 7_3:+80118534 | Msa1128260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATAAAAATTAAAAA+AGG | - | chr7_3:80119154-80119173 | None:intergenic | 0.0% |
| !!! | TAATAAAATCTATTCTTTTA+AGG | + | chr7_3:80117915-80117934 | Msa1128260:intron | 10.0% |
| !! | AAATTCATTAAAAACAATAA+GGG | + | chr7_3:80117987-80118006 | Msa1128260:intron | 10.0% |
| !! | AAAATAGTTATAGTATTGTT+TGG | - | chr7_3:80117147-80117166 | None:intergenic | 15.0% |
| !!! | AAAATATTGATACTTTTGAA+AGG | + | chr7_3:80117221-80117240 | Msa1128260:intron | 15.0% |
| !! | CAAATTCATTAAAAACAATA+AGG | + | chr7_3:80117986-80118005 | Msa1128260:intron | 15.0% |
| !!! | AAATTCAAATTTTCTATAGA+TGG | + | chr7_3:80118832-80118851 | Msa1128260:intron | 15.0% |
| !!! | TCATTTTTTTTTACCAAAAA+AGG | - | chr7_3:80119469-80119488 | None:intergenic | 15.0% |
| !!! | TTTTTGGTAAAAAAAAATGA+AGG | + | chr7_3:80119469-80119488 | Msa1128260:intron | 15.0% |
| !!! | ATTAAAGTCTAATTTTGTAT+CGG | + | chr7_3:80119910-80119929 | Msa1128260:three_prime_UTR | 15.0% |
| !!! | ACTATTTTTTTACAGTACTA+TGG | + | chr7_3:80117159-80117178 | Msa1128260:intron | 20.0% |
| !! | ATAATATATCTCAGCATATT+TGG | - | chr7_3:80117276-80117295 | None:intergenic | 20.0% |
| !!! | TTTTTAAATGTACGACTAAA+TGG | + | chr7_3:80117398-80117417 | Msa1128260:intron | 20.0% |
| !!! | TTTTAAATGTACGACTAAAT+GGG | + | chr7_3:80117399-80117418 | Msa1128260:intron | 20.0% |
| !! | TAAATAAGTTACAAACAATG+TGG | + | chr7_3:80117558-80117577 | Msa1128260:intron | 20.0% |
| !! | ATGATTTATAGAACAAAACA+CGG | - | chr7_3:80118033-80118052 | None:intergenic | 20.0% |
| !!! | AAATATCTTGTCATACTTTT+GGG | - | chr7_3:80118323-80118342 | None:intergenic | 20.0% |
| !!! | AAAATATCTTGTCATACTTT+TGG | - | chr7_3:80118324-80118343 | None:intergenic | 20.0% |
| !! | GAAAGATATAAACAAATTGT+GGG | - | chr7_3:80118423-80118442 | None:intergenic | 20.0% |
| !! | AATATAAATGAGTAAAACGA+CGG | - | chr7_3:80118659-80118678 | None:intergenic | 20.0% |
| !! | ATATGAGATTGATTATTGAT+TGG | + | chr7_3:80118871-80118890 | Msa1128260:intron | 20.0% |
| !!! | TGGATTCTAATTCTAATTTT+AGG | + | chr7_3:80119337-80119356 | Msa1128260:intron | 20.0% |
| !!! | ACATTTGACCTTTATTTTAT+GGG | - | chr7_3:80119876-80119895 | None:intergenic | 20.0% |
| !!! | AACATTTGACCTTTATTTTA+TGG | - | chr7_3:80119877-80119896 | None:intergenic | 20.0% |
| !!! | TGGGTTTTATTTATGAGATT+CGG | + | chr7_3:80117418-80117437 | Msa1128260:intron | 25.0% |
| ! | AAATGTTAGCTCAAAGAAAT+AGG | + | chr7_3:80117479-80117498 | Msa1128260:intron | 25.0% |
| ! | AATGTTAGCTCAAAGAAATA+GGG | + | chr7_3:80117480-80117499 | Msa1128260:intron | 25.0% |
| ! | TATTTATACACTCAACAGTT+CGG | + | chr7_3:80117513-80117532 | Msa1128260:intron | 25.0% |
| ! | ACACTCTTAAGTAAAGATTA+GGG | - | chr7_3:80118096-80118115 | None:intergenic | 25.0% |
| ! | TACACTCTTAAGTAAAGATT+AGG | - | chr7_3:80118097-80118116 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTGCTAATGAAAA+TGG | - | chr7_3:80118231-80118250 | None:intergenic | 25.0% |
| ! | GGAAAGATATAAACAAATTG+TGG | - | chr7_3:80118424-80118443 | None:intergenic | 25.0% |
| ! | ATAGCAAAAGAAAACGAATT+GGG | - | chr7_3:80118452-80118471 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGCTTTGTTCATT+AGG | + | chr7_3:80118485-80118504 | Msa1128260:intron | 25.0% |
| ! | TTGTTGAATTTGAAAAGAGA+TGG | + | chr7_3:80118718-80118737 | Msa1128260:intron | 25.0% |
| !! | TTCTATAGATGGTAATGAAT+TGG | + | chr7_3:80118843-80118862 | Msa1128260:intron | 25.0% |
| !!! | TTGATTGGTTTTAATGTTGT+TGG | + | chr7_3:80118886-80118905 | Msa1128260:intron | 25.0% |
| ! | TTAAAAAAGGCAAAGCAAAT+GGG | - | chr7_3:80119141-80119160 | None:intergenic | 25.0% |
| ! | ATTAAAAAAGGCAAAGCAAA+TGG | - | chr7_3:80119142-80119161 | None:intergenic | 25.0% |
| ! | AAAAATATCTTGTGCATGTT+TGG | + | chr7_3:80119186-80119205 | Msa1128260:intron | 25.0% |
| ! | CAAAATTTGTGTTATAATGC+AGG | + | chr7_3:80119362-80119381 | Msa1128260:intron | 25.0% |
| !!! | GTTCTAATTGTTTCCTTTTT+TGG | + | chr7_3:80119453-80119472 | Msa1128260:intron | 25.0% |
| !!! | TTGGTATTTTCTGGTTATTT+AGG | + | chr7_3:80119550-80119569 | Msa1128260:intron | 25.0% |
| !!! | TGGTATTTTCTGGTTATTTA+GGG | + | chr7_3:80119551-80119570 | Msa1128260:intron | 25.0% |
| ! | GAAAAGGTTTACAAATACAT+AGG | - | chr7_3:80119755-80119774 | None:intergenic | 25.0% |
| ! | TGCATTAAGAAATGAAGAAA+AGG | - | chr7_3:80119771-80119790 | None:intergenic | 25.0% |
| TGGAGTAAAAAGAAAGACAA+AGG | - | chr7_3:80117127-80117146 | None:intergenic | 30.0% | |
| TCCAAATGTTCAAAACTCTA+GGG | - | chr7_3:80117193-80117212 | None:intergenic | 30.0% | |
| ! | TGAAGATGTTGGTTAGATAT+TGG | + | chr7_3:80117248-80117267 | Msa1128260:intron | 30.0% |
| ! | GAAGATGTTGGTTAGATATT+GGG | + | chr7_3:80117249-80117268 | Msa1128260:intron | 30.0% |
| !!! | GGGTTTTATTTATGAGATTC+GGG | + | chr7_3:80117419-80117438 | Msa1128260:intron | 30.0% |
| !!! | GGTTTTATTTATGAGATTCG+GGG | + | chr7_3:80117420-80117439 | Msa1128260:intron | 30.0% |
| ! | TAACATTTGAGATGATATCC+AGG | - | chr7_3:80117467-80117486 | None:intergenic | 30.0% |
| ATGAGATACGTCAAAATAGA+TGG | - | chr7_3:80117875-80117894 | None:intergenic | 30.0% | |
| TAATCTACAAATATCACAGC+AGG | + | chr7_3:80118146-80118165 | Msa1128260:intron | 30.0% | |
| AATATCTAAACTCTCATCAC+CGG | + | chr7_3:80118251-80118270 | Msa1128260:intron | 30.0% | |
| TTTAGAGAGAGAGAAAATTG+TGG | - | chr7_3:80118368-80118387 | None:intergenic | 30.0% | |
| AGATATAAACAAATTGTGGG+AGG | - | chr7_3:80118420-80118439 | None:intergenic | 30.0% | |
| TAGCAAAAGAAAACGAATTG+GGG | - | chr7_3:80118451-80118470 | None:intergenic | 30.0% | |
| CATAGCAAAAGAAAACGAAT+TGG | - | chr7_3:80118453-80118472 | None:intergenic | 30.0% | |
| ! | CAATTCGTTTTCTTTTGCTA+TGG | + | chr7_3:80118451-80118470 | Msa1128260:intron | 30.0% |
| ! | CAAATTCAAGAAGCATATTC+AGG | + | chr7_3:80118801-80118820 | Msa1128260:CDS | 30.0% |
| AAGAAGAATTGTTACGAACT+TGG | - | chr7_3:80118987-80119006 | None:intergenic | 30.0% | |
| !!! | GTTTTACCTCGTTTTGTTTA+CGG | - | chr7_3:80119051-80119070 | None:intergenic | 30.0% |
| ACAAGACGAGAAAAACAATA+GGG | - | chr7_3:80119098-80119117 | None:intergenic | 30.0% | |
| ! | AAACACGTGATTTTGTTGAA+AGG | + | chr7_3:80119218-80119237 | Msa1128260:intron | 30.0% |
| AGTTAGGTGCATTTGAATAT+TGG | + | chr7_3:80119317-80119336 | Msa1128260:intron | 30.0% | |
| GATGAATAATGTCAAAGATG+AGG | + | chr7_3:80119419-80119438 | Msa1128260:CDS | 30.0% | |
| TCAAAGATGAGGTATACTAT+TGG | + | chr7_3:80119430-80119449 | Msa1128260:intron | 30.0% | |
| CAAAGATGAGGTATACTATT+GGG | + | chr7_3:80119431-80119450 | Msa1128260:intron | 30.0% | |
| !! | ATGTATTGTTGATGATGTGA+TGG | + | chr7_3:80119521-80119540 | Msa1128260:intron | 30.0% |
| !! | TGTATTGTTGATGATGTGAT+GGG | + | chr7_3:80119522-80119541 | Msa1128260:intron | 30.0% |
| !!! | GGTATTTTCTGGTTATTTAG+GGG | + | chr7_3:80119552-80119571 | Msa1128260:intron | 30.0% |
| !!! | GTATTTTCTGGTTATTTAGG+GGG | + | chr7_3:80119553-80119572 | Msa1128260:intron | 30.0% |
| GGTTTACAAATACATAGGAT+AGG | - | chr7_3:80119750-80119769 | None:intergenic | 30.0% | |
| ATTGAAGTGAAATTCTACAC+AGG | + | chr7_3:80119804-80119823 | Msa1128260:three_prime_UTR | 30.0% | |
| TTGAAGTGAAATTCTACACA+GGG | + | chr7_3:80119805-80119824 | Msa1128260:three_prime_UTR | 30.0% | |
| ! | AGTCTAATTTTGTATCGGAT+TGG | + | chr7_3:80119915-80119934 | Msa1128260:three_prime_UTR | 30.0% |
| ! | AGGAAAGTATGCATACCAAT+GGG | - | chr7_3:80117107-80117126 | None:intergenic | 35.0% |
| ! | AAGGAAAGTATGCATACCAA+TGG | - | chr7_3:80117108-80117127 | None:intergenic | 35.0% |
| !!! | ACCCTAGAGTTTTGAACATT+TGG | + | chr7_3:80117189-80117208 | Msa1128260:intron | 35.0% |
| CTCCAAATGTTCAAAACTCT+AGG | - | chr7_3:80117194-80117213 | None:intergenic | 35.0% | |
| TGAAAGGTCTATGAAGATGT+TGG | + | chr7_3:80117237-80117256 | Msa1128260:intron | 35.0% | |
| TTATTTATGAGATTCGGGGT+TGG | + | chr7_3:80117424-80117443 | Msa1128260:intron | 35.0% | |
| ! | GGTTGGTTACCATGTTAAAT+AGG | + | chr7_3:80117441-80117460 | Msa1128260:intron | 35.0% |
| ATATCCAGGCCTATTTAACA+TGG | - | chr7_3:80117453-80117472 | None:intergenic | 35.0% | |
| CATATGCTTCCAATCATCAT+CGG | + | chr7_3:80117695-80117714 | Msa1128260:intron | 35.0% | |
| ! | AAAGTTCGAGAGAATTTTGC+CGG | - | chr7_3:80118273-80118292 | None:intergenic | 35.0% |
| TTTGTGGGAGATAGAAACAT+GGG | - | chr7_3:80118299-80118318 | None:intergenic | 35.0% | |
| ! | TTTTGTGGGAGATAGAAACA+TGG | - | chr7_3:80118300-80118319 | None:intergenic | 35.0% |
| !!! | GTCATACTTTTGGGTTTTGT+GGG | - | chr7_3:80118314-80118333 | None:intergenic | 35.0% |
| !!! | TGTCATACTTTTGGGTTTTG+TGG | - | chr7_3:80118315-80118334 | None:intergenic | 35.0% |
| AAGAAAACGAATTGGGGTAT+GGG | - | chr7_3:80118445-80118464 | None:intergenic | 35.0% | |
| AAAGAAAACGAATTGGGGTA+TGG | - | chr7_3:80118446-80118465 | None:intergenic | 35.0% | |
| !! | TGAAAGCTTTGTTCATTAGG+AGG | + | chr7_3:80118488-80118507 | Msa1128260:intron | 35.0% |
| !! | TCTTGCTATTACTCTGTTCT+TGG | + | chr7_3:80118567-80118586 | Msa1128260:CDS | 35.0% |
| GATTTCGAGCGAATTTATCA+GGG | - | chr7_3:80118746-80118765 | None:intergenic | 35.0% | |
| AAAAGATCAATGTACGATGC+TGG | + | chr7_3:80118934-80118953 | Msa1128260:CDS | 35.0% | |
| ! | ATTTTGCCGTAAACAAAACG+AGG | + | chr7_3:80119042-80119061 | Msa1128260:intron | 35.0% |
| CACAAGACGAGAAAAACAAT+AGG | - | chr7_3:80119099-80119118 | None:intergenic | 35.0% | |
| ATGGGAATCATGTATGTTAC+CGG | - | chr7_3:80119123-80119142 | None:intergenic | 35.0% | |
| ACAAAATCACGTGTTTACAG+TGG | - | chr7_3:80119214-80119233 | None:intergenic | 35.0% | |
| !! | GTATTGTTGATGATGTGATG+GGG | + | chr7_3:80119523-80119542 | Msa1128260:intron | 35.0% |
| !!! | TGGGGTATTTTGGTATTTTC+TGG | + | chr7_3:80119541-80119560 | Msa1128260:intron | 35.0% |
| ! | ACAAAGGATGTTTGTTGAGA+TGG | + | chr7_3:80119592-80119611 | Msa1128260:CDS | 35.0% |
| TGATTTGAACCAAGATCAGA+CGG | + | chr7_3:80119637-80119656 | Msa1128260:CDS | 35.0% | |
| !!! | CTTTATTTTATGGGCAGGAA+GGG | - | chr7_3:80119867-80119886 | None:intergenic | 35.0% |
| !!! | TTGACCTTTATTTTATGGGC+AGG | - | chr7_3:80119872-80119891 | None:intergenic | 35.0% |
| GTTACCATGTTAAATAGGCC+TGG | + | chr7_3:80117446-80117465 | Msa1128260:intron | 40.0% | |
| TTTATAGTCCCACATCTCTC+AGG | - | chr7_3:80117542-80117561 | None:intergenic | 40.0% | |
| CGACATGAGATTTCACAATG+TGG | + | chr7_3:80117648-80117667 | Msa1128260:intron | 40.0% | |
| !! | CGGCTCGATGTTACTTTATT+TGG | + | chr7_3:80117715-80117734 | Msa1128260:intron | 40.0% |
| GTCAAATTATCACTGCTTGC+AGG | + | chr7_3:80117737-80117756 | Msa1128260:intron | 40.0% | |
| AAATCAGCAACAACCAACTG+AGG | + | chr7_3:80117805-80117824 | Msa1128260:intron | 40.0% | |
| ! | GGTGAGACTAACTGATAATG+TGG | - | chr7_3:80117854-80117873 | None:intergenic | 40.0% |
| TCCTCATTTCACACGATTGT+GGG | - | chr7_3:80118173-80118192 | None:intergenic | 40.0% | |
| AGAGAGAGAAAATTGTGGAG+CGG | - | chr7_3:80118363-80118382 | None:intergenic | 40.0% | |
| !! | AAGCTTTGTTCATTAGGAGG+AGG | + | chr7_3:80118491-80118510 | Msa1128260:intron | 40.0% |
| GTATTACCATAGCGAGTTTG+CGG | - | chr7_3:80118635-80118654 | None:intergenic | 40.0% | |
| GGATTTCGAGCGAATTTATC+AGG | - | chr7_3:80118747-80118766 | None:intergenic | 40.0% | |
| !! | AATTTGCTGAAACCGTCGTT+TGG | - | chr7_3:80118787-80118806 | None:intergenic | 40.0% |
| ! | ACTTGGTCTTCTTCTTCAAG+AGG | - | chr7_3:80118970-80118989 | None:intergenic | 40.0% |
| !!! | GAGGTAAAACTGTGTCGTTT+TGG | + | chr7_3:80119061-80119080 | Msa1128260:intron | 40.0% |
| AGAAAAACAATAGGGTCGTC+TGG | - | chr7_3:80119090-80119109 | None:intergenic | 40.0% | |
| ! | TGTTTTTCTCGTCTTGTGTC+CGG | + | chr7_3:80119101-80119120 | Msa1128260:intron | 40.0% |
| !! | GATGATGTGATGGGGTATTT+TGG | + | chr7_3:80119531-80119550 | Msa1128260:intron | 40.0% |
| ACAGTTTGGAGGATCTACAA+AGG | + | chr7_3:80119576-80119595 | Msa1128260:CDS | 40.0% | |
| ! | AGGATGTTTGTTGAGATGGT+AGG | + | chr7_3:80119596-80119615 | Msa1128260:CDS | 40.0% |
| ! | ATGTTTGTTGAGATGGTAGG+TGG | + | chr7_3:80119599-80119618 | Msa1128260:CDS | 40.0% |
| !!! | CCTTTATTTTATGGGCAGGA+AGG | - | chr7_3:80119868-80119887 | None:intergenic | 40.0% |
| CCTTCCTGCCCATAAAATAA+AGG | + | chr7_3:80119865-80119884 | Msa1128260:three_prime_UTR | 40.0% | |
| ACATGATCACATCGACCCAT+TGG | + | chr7_3:80117089-80117108 | Msa1128260:intron | 45.0% | |
| TTCGGAAACCTGAGAGATGT+GGG | + | chr7_3:80117531-80117550 | Msa1128260:intron | 45.0% | |
| TGGATCCCTGTTATGCACTA+GGG | + | chr7_3:80117617-80117636 | Msa1128260:intron | 45.0% | |
| ATCCACCCTAGTGCATAACA+GGG | - | chr7_3:80117625-80117644 | None:intergenic | 45.0% | |
| TATCCACCCTAGTGCATAAC+AGG | - | chr7_3:80117626-80117645 | None:intergenic | 45.0% | |
| AACATCGAGCCGATGATGAT+TGG | - | chr7_3:80117707-80117726 | None:intergenic | 45.0% | |
| TCCCACAATCGTGTGAAATG+AGG | + | chr7_3:80118169-80118188 | Msa1128260:intron | 45.0% | |
| CTCCTCATTTCACACGATTG+TGG | - | chr7_3:80118174-80118193 | None:intergenic | 45.0% | |
| CAATCGTGTGAAATGAGGAG+TGG | + | chr7_3:80118174-80118193 | Msa1128260:intron | 45.0% | |
| AAAATTGTGGAGCGGTGAAG+AGG | - | chr7_3:80118355-80118374 | None:intergenic | 45.0% | |
| TCATTAGGAGGAGGATCCAA+CGG | + | chr7_3:80118500-80118519 | Msa1128260:intron | 45.0% | |
| AGAAGATCTACTACCACCGT+TGG | - | chr7_3:80118550-80118569 | None:intergenic | 45.0% | |
| GTAAGCAGTGCGAATATCAG+AGG | - | chr7_3:80118613-80118632 | None:intergenic | 45.0% | |
| TTCGTTTCAGTTGCAGAGCA+TGG | + | chr7_3:80119007-80119026 | Msa1128260:intron | 45.0% | |
| TCGTTTCAGTTGCAGAGCAT+GGG | + | chr7_3:80119008-80119027 | Msa1128260:intron | 45.0% | |
| CTTGTAGTGCAGCTCAAGTT+AGG | + | chr7_3:80119301-80119320 | Msa1128260:intron | 45.0% | |
| GGTTATTTAGGGGGACAGTT+TGG | + | chr7_3:80119562-80119581 | Msa1128260:intron | 45.0% | |
| TATTTAGGGGGACAGTTTGG+AGG | + | chr7_3:80119565-80119584 | Msa1128260:intron | 45.0% | |
| GTTCGGAAACCTGAGAGATG+TGG | + | chr7_3:80117530-80117549 | Msa1128260:intron | 50.0% | |
| ACCCACTTTCACGTCTAGTG+TGG | + | chr7_3:80117591-80117610 | Msa1128260:intron | 50.0% | |
| CCCACACTAGACGTGAAAGT+GGG | - | chr7_3:80117595-80117614 | None:intergenic | 50.0% | |
| CCCACTTTCACGTCTAGTGT+GGG | + | chr7_3:80117592-80117611 | Msa1128260:intron | 50.0% | |
| CTAGTGCATAACAGGGATCC+AGG | - | chr7_3:80117618-80117637 | None:intergenic | 50.0% | |
| CTGGATCCCTGTTATGCACT+AGG | + | chr7_3:80117616-80117635 | Msa1128260:intron | 50.0% | |
| ATCCCTGTTATGCACTAGGG+TGG | + | chr7_3:80117620-80117639 | Msa1128260:intron | 50.0% | |
| AGATTGTGAGCTGCCTCAGT+TGG | - | chr7_3:80117821-80117840 | None:intergenic | 50.0% | |
| TGAGGCAGCTCACAATCTTG+CGG | + | chr7_3:80117823-80117842 | Msa1128260:intron | 50.0% | |
| TGAAATGAGGAGTGGCACAG+CGG | + | chr7_3:80118182-80118201 | Msa1128260:intron | 50.0% | |
| CCTTCTTGATCCATCACCGT+TGG | - | chr7_3:80118519-80118538 | None:intergenic | 50.0% | |
| !! | CCAACGGTGATGGATCAAGA+AGG | + | chr7_3:80118516-80118535 | Msa1128260:CDS | 50.0% |
| !! | ACGGTGATGGATCAAGAAGG+AGG | + | chr7_3:80118519-80118538 | Msa1128260:CDS | 50.0% |
| !! | GTGATGGATCAAGAAGGAGG+AGG | + | chr7_3:80118522-80118541 | Msa1128260:CDS | 50.0% |
| CAAGAAGGAGGAGGATCCAA+CGG | + | chr7_3:80118531-80118550 | Msa1128260:CDS | 50.0% | |
| AGTGCGAATATCAGAGGAGG+AGG | - | chr7_3:80118607-80118626 | None:intergenic | 50.0% | |
| AGCAGTGCGAATATCAGAGG+AGG | - | chr7_3:80118610-80118629 | None:intergenic | 50.0% | |
| TGCTTACCGCAAACTCGCTA+TGG | + | chr7_3:80118626-80118645 | Msa1128260:CDS | 50.0% | |
| GCTCGAAATCCTACAACTGC+CGG | + | chr7_3:80118756-80118775 | Msa1128260:CDS | 50.0% | |
| ! | AAACCGTCGTTTGGCTTCTC+CGG | - | chr7_3:80118778-80118797 | None:intergenic | 50.0% |
| CGTTTCAGTTGCAGAGCATG+GGG | + | chr7_3:80119009-80119028 | Msa1128260:intron | 50.0% | |
| GTTGAGATGGTAGGTGGAGA+TGG | + | chr7_3:80119605-80119624 | Msa1128260:CDS | 50.0% | |
| TTGAACCAAGATCAGACGGC+TGG | + | chr7_3:80119641-80119660 | Msa1128260:CDS | 50.0% | |
| TGAACCAAGATCAGACGGCT+GGG | + | chr7_3:80119642-80119661 | Msa1128260:CDS | 50.0% | |
| GCCCACACTAGACGTGAAAG+TGG | - | chr7_3:80117596-80117615 | None:intergenic | 55.0% | |
| TTTCACGTCTAGTGTGGGCC+TGG | + | chr7_3:80117597-80117616 | Msa1128260:intron | 55.0% | |
| GAGGCAGCTCACAATCTTGC+GGG | + | chr7_3:80117824-80117843 | Msa1128260:intron | 55.0% | |
| AGGCAGCTCACAATCTTGCG+GGG | + | chr7_3:80117825-80117844 | Msa1128260:intron | 55.0% | |
| TTGGCTTCTCCGGCAGTTGT+AGG | - | chr7_3:80118768-80118787 | None:intergenic | 55.0% | |
| TCTTCCCAGCCGTCTGATCT+TGG | - | chr7_3:80119649-80119668 | None:intergenic | 55.0% | |
| GGACGCTCAAGTGGATCAAG+AGG | + | chr7_3:80119671-80119690 | Msa1128260:CDS | 55.0% | |
| AGCAATCATTGCCGCTAGCG+TGG | + | chr7_3:80119710-80119729 | Msa1128260:exon | 55.0% | |
| CATCCAGTACACCACGCTAG+CGG | - | chr7_3:80119724-80119743 | None:intergenic | 55.0% | |
| GGAGGAGGATCCAACGGTGA+TGG | + | chr7_3:80118506-80118525 | Msa1128260:intron | 60.0% | |
| GAAGGAGGAGGATCCAACGG+TGG | + | chr7_3:80118534-80118553 | Msa1128260:CDS | 60.0% | |
| CTGCCGGAGAAGCCAAACGA+CGG | + | chr7_3:80118772-80118791 | Msa1128260:CDS | 60.0% | |
| GATCAGACGGCTGGGAAGAG+AGG | + | chr7_3:80119650-80119669 | Msa1128260:CDS | 60.0% | |
| GGGAAGAGAGGACGCTCAAG+TGG | + | chr7_3:80119662-80119681 | Msa1128260:CDS | 60.0% | |
| GCGGCAATGATTGCTGCGCT+TGG | - | chr7_3:80119705-80119724 | None:intergenic | 60.0% | |
| TTGCCGCTAGCGTGGTGTAC+TGG | + | chr7_3:80119718-80119737 | Msa1128260:exon | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 80117065 | 80119938 | 80117065 | ID=Msa1128260;Name=Msa1128260 |
| chr7_3 | mRNA | 80117065 | 80119938 | 80117065 | ID=Msa1128260-mRNA-1;Parent=Msa1128260;Name=Msa1128260-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.66|0.57|0.71|0.66|0.71|7|211|175 |
| chr7_3 | exon | 80117065 | 80117072 | 80117065 | ID=Msa1128260-mRNA-1:exon:22862;Parent=Msa1128260-mRNA-1 |
| chr7_3 | exon | 80117174 | 80117180 | 80117174 | ID=Msa1128260-mRNA-1:exon:22863;Parent=Msa1128260-mRNA-1 |
| chr7_3 | exon | 80118507 | 80118647 | 80118507 | ID=Msa1128260-mRNA-1:exon:22864;Parent=Msa1128260-mRNA-1 |
| chr7_3 | exon | 80118735 | 80118822 | 80118735 | ID=Msa1128260-mRNA-1:exon:22865;Parent=Msa1128260-mRNA-1 |
| chr7_3 | exon | 80118917 | 80118987 | 80118917 | ID=Msa1128260-mRNA-1:exon:22866;Parent=Msa1128260-mRNA-1 |
| chr7_3 | exon | 80119384 | 80119440 | 80119384 | ID=Msa1128260-mRNA-1:exon:22867;Parent=Msa1128260-mRNA-1 |
| chr7_3 | exon | 80119572 | 80119938 | 80119572 | ID=Msa1128260-mRNA-1:exon:22868;Parent=Msa1128260-mRNA-1 |
| chr7_3 | CDS | 80117065 | 80117072 | 80117065 | ID=Msa1128260-mRNA-1:cds;Parent=Msa1128260-mRNA-1 |
| chr7_3 | CDS | 80117174 | 80117180 | 80117174 | ID=Msa1128260-mRNA-1:cds;Parent=Msa1128260-mRNA-1 |
| chr7_3 | CDS | 80118507 | 80118647 | 80118507 | ID=Msa1128260-mRNA-1:cds;Parent=Msa1128260-mRNA-1 |
| chr7_3 | CDS | 80118735 | 80118822 | 80118735 | ID=Msa1128260-mRNA-1:cds;Parent=Msa1128260-mRNA-1 |
| chr7_3 | CDS | 80118917 | 80118987 | 80118917 | ID=Msa1128260-mRNA-1:cds;Parent=Msa1128260-mRNA-1 |
| chr7_3 | CDS | 80119384 | 80119440 | 80119384 | ID=Msa1128260-mRNA-1:cds;Parent=Msa1128260-mRNA-1 |
| chr7_3 | CDS | 80119572 | 80119727 | 80119572 | ID=Msa1128260-mRNA-1:cds;Parent=Msa1128260-mRNA-1 |
| chr7_3 | three_prime_UTR | 80119728 | 80119938 | 80119728 | ID=Msa1128260-mRNA-1:three_prime_utr;Parent=Msa1128260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
