AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0166950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166950 MtrunA17_Chr1g0182481 85.396 897 26 5 1 792 1 897 0.0 1526
Msa0166950 MtrunA17_Chr7g0265211 57.709 227 93 3 564 788 722 947 1.89e-77 269
Msa0166950 MtrunA17_Chr7g0265211 66.667 75 24 1 445 519 482 555 6.34e-23 105
Msa0166950 MtrunA17_Chr7g0265211 28.492 358 220 11 27 364 19 360 2.05e-19 93.6
Msa0166950 MtrunA17_Chr1g0179841 54.626 227 100 3 564 788 577 802 1.04e-69 245
Msa0166950 MtrunA17_Chr1g0179841 59.375 64 26 0 456 519 347 410 7.90e-18 88.6
Msa0166950 MtrunA17_Chr2g0320451 54.211 190 77 4 608 788 835 1023 9.70e-55 204
Msa0166950 MtrunA17_Chr2g0320451 32.372 312 165 8 253 525 226 530 1.25e-35 145
Msa0166950 MtrunA17_Chr4g0028111 46.734 199 101 4 564 758 361 558 2.84e-44 169
Msa0166950 MtrunA17_Chr4g0025251 42.105 228 126 5 564 786 473 699 3.80e-44 170
Msa0166950 MtrunA17_Chr4g0025251 40.404 99 45 3 429 519 158 250 5.57e-12 69.3
Msa0166950 MtrunA17_Chr1g0182221 51.449 138 67 0 241 378 389 526 9.87e-42 160
Msa0166950 MtrunA17_Chr4g0030901 45.324 139 75 1 240 378 305 442 6.99e-38 147
Msa0166950 MtrunA17_Chr7g0222931 48.485 132 68 0 239 370 390 521 9.51e-35 139
Msa0166950 MtrunA17_Chr4g0027811 31.801 261 109 6 539 786 372 576 3.12e-28 120
Msa0166950 MtrunA17_Chr4g0027811 37.097 124 65 3 398 519 132 244 1.31e-13 74.3
Msa0166950 MtrunA17_Chr2g0316251 27.036 307 181 11 500 786 881 1164 2.09e-24 110
Msa0166950 MtrunA17_Chr7g0270101 26.935 323 181 11 493 787 492 787 3.82e-23 105
Msa0166950 MtrunA17_Chr5g0430361 26.415 318 184 11 493 788 768 1057 9.66e-23 104
Msa0166950 MtrunA17_Chr1g0205451 26.852 324 180 11 497 788 714 1012 1.22e-21 101
Msa0166950 MtrunA17_Chr3g0105291 28.777 278 154 9 519 770 732 991 9.78e-21 98.2
Msa0166950 MtrunA17_Chr5g0407251 25.161 310 170 10 506 787 144 419 1.12e-17 86.7
Msa0166950 MtrunA17_Chr3g0134821 26.059 307 176 9 488 762 520 807 2.01e-17 87.0
Msa0166950 MtrunA17_Chr3g0134811 23.881 335 182 11 490 783 489 791 3.68e-17 86.3
Msa0166950 MtrunA17_Chr5g0407211 24.516 310 172 10 506 787 144 419 7.83e-17 84.0
Msa0166950 MtrunA17_Chr2g0320431 36.697 109 64 1 253 356 23 131 2.15e-16 80.5
Msa0166950 MtrunA17_Chr1g0185491 23.765 324 190 11 497 788 922 1220 7.33e-16 82.4
Msa0166950 MtrunA17_Chr7g0259981 24.451 319 187 13 488 792 18 296 1.62e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166950 AT2G37520.1 44.231 520 203 12 1 519 1 434 2.43e-121 385
Msa0166950 AT2G37520.1 56.481 324 83 5 521 788 494 815 1.91e-112 361
Msa0166950 AT3G53680.2 54.969 322 89 4 521 788 514 833 1.92e-107 348
Msa0166950 AT3G53680.2 40.713 533 222 13 1 519 1 453 6.24e-105 342
Msa0166950 AT3G53680.1 54.969 322 89 4 521 788 512 831 2.00e-107 348
Msa0166950 AT3G53680.1 40.602 532 222 13 1 519 1 451 4.10e-105 342
Msa0166950 AT2G36720.1 39.011 364 143 8 493 790 625 975 5.97e-64 232
Msa0166950 AT2G36720.1 31.611 329 170 8 246 519 253 581 4.31e-32 134
Msa0166950 AT2G36720.2 39.011 364 143 8 493 790 625 975 5.97e-64 232
Msa0166950 AT2G36720.2 31.611 329 170 8 246 519 253 581 4.31e-32 134
Msa0166950 AT2G27980.1 44.206 233 126 3 562 790 827 1059 3.32e-56 209
Msa0166950 AT2G27980.1 30.333 300 174 5 246 519 371 661 6.92e-29 124
Msa0166950 AT5G59830.3 49.275 138 69 1 241 378 278 414 1.74e-39 152
Msa0166950 AT5G59830.1 49.275 138 69 1 241 378 278 414 1.74e-39 152
Msa0166950 AT5G59830.2 49.275 138 69 1 241 378 278 414 1.74e-39 152
Msa0166950 AT5G13660.1 49.296 142 72 0 229 370 374 515 9.54e-36 143
Msa0166950 AT5G13660.2 48.951 143 72 1 229 370 374 516 2.87e-35 141
Msa0166950 AT5G58610.7 26.959 319 187 9 493 788 704 999 3.06e-25 113
Msa0166950 AT5G58610.3 26.959 319 187 9 493 788 713 1008 3.18e-25 113
Msa0166950 AT5G58610.5 26.959 319 187 9 493 788 704 999 3.88e-25 112
Msa0166950 AT5G58610.8 26.959 319 187 9 493 788 713 1008 4.47e-25 112
Msa0166950 AT5G58610.2 26.959 319 187 9 493 788 713 1008 4.47e-25 112
Msa0166950 AT5G58610.4 26.959 319 187 9 493 788 482 777 4.58e-25 112
Msa0166950 AT4G14920.2 27.019 322 183 12 493 790 692 985 2.83e-23 106
Msa0166950 AT4G14920.1 27.019 322 183 12 493 790 692 985 2.83e-23 106
Msa0166950 AT4G14920.3 27.019 322 183 12 493 790 692 985 2.98e-23 106
Msa0166950 AT3G14980.6 27.760 317 180 12 497 788 731 1023 8.57e-22 102
Msa0166950 AT3G14980.1 27.760 317 180 12 497 788 731 1023 8.57e-22 102
Msa0166950 AT3G14980.2 27.760 317 180 12 497 788 731 1023 8.57e-22 102
Msa0166950 AT3G14980.5 27.760 317 180 12 497 788 686 978 8.60e-22 102
Msa0166950 AT3G14980.3 27.389 314 185 11 497 788 731 1023 1.13e-21 101
Msa0166950 AT5G58610.1 27.815 302 180 10 493 788 704 973 3.57e-20 96.7
Msa0166950 AT1G05380.3 26.899 316 183 10 497 786 630 923 4.18e-20 96.7
Msa0166950 AT1G05380.1 26.899 316 183 10 497 786 630 923 4.18e-20 96.7
Msa0166950 AT1G05380.2 26.899 316 183 10 497 786 630 923 4.18e-20 96.7
Msa0166950 AT5G58610.6 27.815 302 180 10 493 788 704 973 4.81e-20 96.3
Msa0166950 AT5G58610.10 25.188 266 154 8 493 735 713 956 2.25e-16 84.3
Msa0166950 AT5G63900.1 26.442 208 120 7 571 769 342 525 2.30e-16 83.6
Msa0166950 AT5G58610.9 25.188 266 154 8 493 735 704 947 2.65e-16 84.0
Msa0166950 AT5G36740.5 25.240 313 193 12 493 786 657 947 2.06e-15 81.3
Msa0166950 AT5G36740.1 25.240 313 193 12 493 786 657 947 2.06e-15 81.3
Msa0166950 AT5G36740.4 25.077 323 191 12 493 786 504 804 1.26e-14 79.0

Find 231 sgRNAs with CRISPR-Local

Find 671 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCGATTCATGTCTCTTTA+AGG 0.127417 1_4:-48575601 Msa0166950:intron
TCTAGGAATATGTGATTATT+TGG 0.150813 1_4:+48574010 None:intergenic
TTGTGCAGGCGAAATATTTC+TGG 0.184888 1_4:-48566935 Msa0166950:intron
AATCTGCTCTTTACCTTTCC+AGG 0.198769 1_4:+48574303 None:intergenic
CTGATTCCTGTTATGGTATA+TGG 0.204303 1_4:-48567599 Msa0166950:CDS
TGAGATTTGGAGTTTATATA+TGG 0.220931 1_4:+48575767 None:intergenic
GCAAATGATGATTATAATAG+TGG 0.236158 1_4:-48574504 Msa0166950:CDS
GTTGAGCTCGATGGGATTAT+TGG 0.243862 1_4:-48574214 Msa0166950:CDS
TCATGTATAATGCTATAAAT+TGG 0.250757 1_4:+48573977 None:intergenic
AATCACATATTCCTAGAAAA+TGG 0.255410 1_4:-48574004 Msa0166950:CDS
TAGTATCTGCCGGGCTTCTT+AGG 0.257711 1_4:-48566779 Msa0166950:CDS
TCACGGGGATGATGAATATT+TGG 0.260379 1_4:-48574526 Msa0166950:CDS
GATATTGTTGTACATATTTA+CGG 0.262198 1_4:-48565748 Msa0166950:three_prime_UTR
TCCATTTGGACTAAGAAATT+AGG 0.275286 1_4:-48566448 Msa0166950:CDS
GAAGATTCGGAGTTGTATTC+TGG 0.287560 1_4:-48574441 Msa0166950:CDS
GAATTGACTTCCATGGTTCT+TGG 0.288388 1_4:-48565809 Msa0166950:three_prime_UTR
ATTGGAGAGAGAAGAGTGTT+AGG 0.298052 1_4:+48575678 None:intergenic
AATATTTCTGGCCAAGAATT+CGG 0.299340 1_4:-48566923 Msa0166950:CDS
CTGCACCTCTTTAAGATGTT+TGG 0.299842 1_4:+48566208 None:intergenic
CATCCACCCACTTCATATTC+TGG 0.300717 1_4:+48569384 None:intergenic
ATATTTCTGGCCAAGAATTC+GGG 0.311304 1_4:-48566922 Msa0166950:CDS
GAACCTTCTTGCTGCTTTGT+AGG 0.312071 1_4:+48572895 None:intergenic
TTGATGTTCCAGTCAATCTA+TGG 0.315910 1_4:-48570939 Msa0166950:intron
TACTTCTATGTTCTTGCTCT+TGG 0.323315 1_4:-48566058 Msa0166950:three_prime_UTR
TATGGGAATGGCAGTGGATA+TGG 0.328598 1_4:-48574564 Msa0166950:CDS
ATGGGGAACGTGGCCTAAAT+TGG 0.333280 1_4:-48565942 Msa0166950:three_prime_UTR
TCCTCTACTTCTACCAATTT+AGG 0.333703 1_4:+48565929 None:intergenic
ACATTATTGGGGAAGGCGTT+TGG 0.335634 1_4:+48574384 None:intergenic
TTGGAGAGAGAAGAGTGTTA+GGG 0.338277 1_4:+48575679 None:intergenic
TATCAACGAGGGATCCTTCC+AGG 0.341212 1_4:-48573894 Msa0166950:CDS
TTGGTGTTGTAACTAAATTT+TGG 0.344094 1_4:-48566120 Msa0166950:three_prime_UTR
ATTTCAATTGCAGCCTGCTT+AGG 0.360027 1_4:-48569519 Msa0166950:intron
AGCTACAAGTAGAGAGCATC+AGG 0.364271 1_4:-48566721 Msa0166950:CDS
AGAAGTGTAGTGAAGGAGAT+TGG 0.370702 1_4:+48575660 None:intergenic
GCCTAATTTCTTAGTCCAAA+TGG 0.376041 1_4:+48566447 None:intergenic
ACGAGGGATCCTTCCAGGTT+TGG 0.376818 1_4:-48573889 Msa0166950:CDS
GGAGTTGTATTCTGGCAATA+TGG 0.378266 1_4:-48574433 Msa0166950:CDS
CGGTATAGCCAGTAGGTGTT+TGG 0.378831 1_4:+48574616 None:intergenic
CAGGGGATGCAGAGTCCATT+TGG 0.382960 1_4:-48566462 Msa0166950:CDS
GATCCCATCGTTGCAATATC+TGG 0.389667 1_4:-48567629 Msa0166950:CDS
CGGTTGAACTAGCATGCTTC+GGG 0.390012 1_4:+48574694 None:intergenic
GAGAGAAGAGTGTTAGGGTT+TGG 0.391498 1_4:+48575684 None:intergenic
GCTTACCCATATACCATAAC+AGG 0.391501 1_4:+48567593 None:intergenic
TGTTCTGTTGCAGAAACATT+TGG 0.398769 1_4:+48574945 None:intergenic
AGAGTGTTAGGGTTTGGTTT+AGG 0.400190 1_4:+48575690 None:intergenic
GATGGCAGTGGCAGTGACTA+TGG 0.400420 1_4:-48574594 Msa0166950:CDS
CTCATCTGGCGTGCTGTTTG+TGG 0.404835 1_4:+48573943 None:intergenic
AAGTGTTCGTGGTTGAGATT+TGG 0.406597 1_4:+48575754 None:intergenic
TTATCAACCGGTATCCTTGA+TGG 0.408535 1_4:-48574351 Msa0166950:CDS
GACTCTGCATCCCCTGCAGC+AGG 0.410293 1_4:+48566469 None:intergenic
AAGCTGGTGCTCCCTGCTGC+AGG 0.415428 1_4:-48566481 Msa0166950:CDS
TCGTGACCTGATTCCTGTTA+TGG 0.418037 1_4:-48567606 Msa0166950:CDS
CCTTGTCGGAACTAATAATC+AGG 0.420091 1_4:-48568566 Msa0166950:CDS
AAAAGTAATCTTTCGAATAC+CGG 0.420888 1_4:+48574674 None:intergenic
TTCTCAGAGGCTCTGTTAGT+TGG 0.424678 1_4:-48575159 Msa0166950:five_prime_UTR
CTGCAGAACTCAGTTTCTGC+TGG 0.425684 1_4:-48568609 Msa0166950:CDS
AATTTCAGTGAATTCGTGTT+TGG 0.426088 1_4:-48575253 Msa0166950:five_prime_UTR
AGTGGATATGGCTATGGATA+TGG 0.426832 1_4:-48574552 Msa0166950:CDS
TGGTAGAGAGCTCGTATGGC+AGG 0.428854 1_4:-48574479 Msa0166950:CDS
ACATTCTTTATAACCTCATC+TGG 0.434195 1_4:+48573929 None:intergenic
CCGGTTGAACTAGCATGCTT+CGG 0.435129 1_4:+48574693 None:intergenic
AGTTCTATTGTAGTATCTGC+CGG 0.436363 1_4:-48566789 Msa0166950:CDS
CCGAAGCATGCTAGTTCAAC+CGG 0.438023 1_4:-48574693 Msa0166950:CDS
AATTTGTGTCAGAATGATAA+AGG 0.439373 1_4:-48574759 Msa0166950:CDS
CAATTCCAACCTTGATTCCT+CGG 0.442972 1_4:+48575076 None:intergenic
CGTGTCAACCGTATCATGAT+TGG 0.445167 1_4:+48569420 None:intergenic
TCGCACACGCGAAGATGATA+AGG 0.448300 1_4:+48570904 None:intergenic
GAGATTTGGAGTTTATATAT+GGG 0.448844 1_4:+48575768 None:intergenic
GTTTCCACTCATCAGCTGTC+TGG 0.451039 1_4:+48570852 None:intergenic
TACCATACCATCTTCCTTGT+CGG 0.451679 1_4:-48568580 Msa0166950:CDS
TTCTCTAAATGTAGAAAAGC+TGG 0.453959 1_4:-48566497 Msa0166950:CDS
AAATACAGCACAAAGTATAC+TGG 0.455013 1_4:-48572861 Msa0166950:CDS
AATTGTCACCTTTCCAAACC+TGG 0.456107 1_4:+48573876 None:intergenic
CATATACCATAACAGGAATC+AGG 0.457604 1_4:+48567600 None:intergenic
AGCAGTTTGTGTGCAAGAAT+TGG 0.459554 1_4:-48575120 Msa0166950:CDS
GTTTACCTGTTGTATGTATG+AGG 0.461715 1_4:+48572834 None:intergenic
GGAACTGACATCTACTGGTT+TGG 0.462522 1_4:-48574853 Msa0166950:CDS
ACTCACGGTATCATGAGAAC+TGG 0.465826 1_4:+48574824 None:intergenic
ATATGTTCCTTATGAAGATT+CGG 0.467208 1_4:-48574454 Msa0166950:CDS
TCACAAGATGAGTGAAGATC+AGG 0.472645 1_4:-48566422 Msa0166950:intron
GAGAGAAAAGTGAGAGAGTG+CGG 0.472812 1_4:+48575726 None:intergenic
TAAGCCAACTCGGCACCATC+TGG 0.474427 1_4:+48570419 None:intergenic
ATCAAATGATGAATTGCGTT+CGG 0.474499 1_4:-48574979 Msa0166950:CDS
TGATTCCTGTTATGGTATAT+GGG 0.477661 1_4:-48567598 Msa0166950:intron
GCTCTCTACTTGTAGCTACC+AGG 0.479856 1_4:+48566727 None:intergenic
GATGATTACCAAACACCTAC+TGG 0.479989 1_4:-48574624 Msa0166950:CDS
GGAGGTTACAAACAAGGAAA+TGG 0.483140 1_4:-48570277 Msa0166950:CDS
GGCTATGGATATGGTTATCA+CGG 0.483376 1_4:-48574543 Msa0166950:CDS
AACAGTGAGAAGTGTAGTGA+AGG 0.484683 1_4:+48575653 None:intergenic
GCAACAAAACCACTTATCCT+TGG 0.484827 1_4:+48568659 None:intergenic
TGTGTGCAAGAATTGGTTGA+TGG 0.485091 1_4:-48575113 Msa0166950:CDS
AACATCAGTGCTGGAAAAGA+TGG 0.491255 1_4:-48566168 Msa0166950:CDS
CGGAAAATACCGAGGAATCA+AGG 0.492209 1_4:-48575085 Msa0166950:CDS
GCACCATCTGGTAGGCCATT+AGG 0.495313 1_4:+48570431 None:intergenic
CTTCAACAAAACATCAGTGC+TGG 0.496640 1_4:-48566177 Msa0166950:CDS
GTCTGGCCGCCATTCCAGCA+TGG 0.498328 1_4:+48570111 None:intergenic
ATTAGTTCCGACAAGGAAGA+TGG 0.499097 1_4:+48568573 None:intergenic
CAACAAAACCACTTATCCTT+GGG 0.500556 1_4:+48568660 None:intergenic
TCGCAGTTTGAAGCCCATGC+TGG 0.501139 1_4:-48570125 Msa0166950:CDS
TGCCACTTAAAATTCTCCAT+TGG 0.501723 1_4:+48568496 None:intergenic
ATTATTAGGTTGAGCTCGAT+GGG 0.503113 1_4:-48574222 Msa0166950:intron
AGACAATGCCAACCACTCTC+TGG 0.504882 1_4:+48569483 None:intergenic
GCATGCCTCATACATACAAC+AGG 0.508258 1_4:-48572839 Msa0166950:intron
AGTGACTATGGATATAGCTA+TGG 0.509498 1_4:-48574582 Msa0166950:CDS
AGAGAAAAGTGAGAGAGTGC+GGG 0.510964 1_4:+48575727 None:intergenic
AGGAGCTTCCCAAGGATAAG+TGG 0.511538 1_4:-48568668 Msa0166950:CDS
GCATGGGCTTCAAACTGCGA+AGG 0.518290 1_4:+48570128 None:intergenic
GTTTGAAGCCCATGCTGGAA+TGG 0.519222 1_4:-48570120 Msa0166950:CDS
TACAACTCCGAATCTTCATA+AGG 0.519644 1_4:+48574447 None:intergenic
CTGATGGTTGCACTAAGAAA+AGG 0.521651 1_4:-48570620 Msa0166950:intron
AGCATGCTGCTCAAACTCAT+AGG 0.521651 1_4:+48574051 None:intergenic
AATTATTAGGTTGAGCTCGA+TGG 0.522687 1_4:-48574223 Msa0166950:intron
TCTGGCCGCCATTCCAGCAT+GGG 0.525191 1_4:+48570112 None:intergenic
CTGTGGTTGTTGTGATATAG+AGG 0.525574 1_4:-48570248 Msa0166950:intron
GTGAAATATATTTATAACCC+TGG 0.528498 1_4:-48574321 Msa0166950:CDS
TATAGCTATGGGAATGGCAG+TGG 0.529302 1_4:-48574570 Msa0166950:CDS
ATCTGCTCTTTACCTTTCCA+GGG 0.529845 1_4:+48574304 None:intergenic
CCTCGCACCTCTTTCATCAC+CGG 0.530109 1_4:+48569443 None:intergenic
CAATATTGCTGAGCTTCCCC+TGG 0.530864 1_4:-48566745 Msa0166950:CDS
TAATCAGGAAGCATGAGGAC+AGG 0.533029 1_4:-48568551 Msa0166950:CDS
ATGTTAGCCATGCAGAGTGT+GGG 0.533335 1_4:-48574875 Msa0166950:CDS
GCTATGGATATGGTTATCAC+GGG 0.534961 1_4:-48574542 Msa0166950:CDS
CGCTGTTCTCTTGCATAGAG+AGG 0.535338 1_4:-48566528 Msa0166950:CDS
AATCAGGAAGCATGAGGACA+GGG 0.536694 1_4:-48568550 Msa0166950:CDS
TTCCGACAAGGAAGATGGTA+TGG 0.538378 1_4:+48568578 None:intergenic
AATGGCAGTGGATATGGCTA+TGG 0.538700 1_4:-48574558 Msa0166950:CDS
TATGAGTTTGAGCAGCATGC+TGG 0.538811 1_4:-48574049 Msa0166950:CDS
TACACTGTGTAAACCTAAGC+AGG 0.538833 1_4:+48569506 None:intergenic
TGCAGTGTCCCGTGTTGTGA+TGG 0.540141 1_4:-48574721 Msa0166950:CDS
TCATGTTGAATTGACTTCCA+TGG 0.540151 1_4:-48565816 Msa0166950:three_prime_UTR
AGCTGGTGCTCCCTGCTGCA+GGG 0.540416 1_4:-48566480 Msa0166950:CDS
TGTGGGGAACTGACATCTAC+TGG 0.541241 1_4:-48574858 Msa0166950:CDS
GACAGGGGATTATGTACGTA+TGG 0.542273 1_4:-48568534 Msa0166950:CDS
TGCAGCTCCATCAAGGATAC+CGG 0.549874 1_4:+48574344 None:intergenic
GTTAACCAAACATCTTAAAG+AGG 0.550069 1_4:-48566213 Msa0166950:CDS
GTTCTATTGTAGTATCTGCC+GGG 0.553325 1_4:-48566788 Msa0166950:CDS
GCTGGTGCTCCCTGCTGCAG+GGG 0.553471 1_4:-48566479 Msa0166950:CDS
TCAGGGACAACGATTTGCAC+AGG 0.553644 1_4:-48570466 Msa0166950:intron
CATTCTCAGATTCCGTCGGT+TGG 0.554646 1_4:+48574895 None:intergenic
CCTACCAGATGGTGCCGAGT+TGG 0.554670 1_4:-48570423 Msa0166950:CDS
ATAGTCACTGCCACTGCCAT+CGG 0.556162 1_4:+48574596 None:intergenic
ATGCCTAATGGCCTACCAGA+TGG 0.557585 1_4:-48570434 Msa0166950:CDS
GGGTTTGGTTTAGGAACGAA+AGG 0.558482 1_4:+48575699 None:intergenic
CAGCATGCACGAATAAATCA+AGG 0.560419 1_4:+48575230 None:intergenic
GCCTAAATTGGTAGAAGTAG+AGG 0.560540 1_4:-48565930 Msa0166950:three_prime_UTR
AAATACCGAGGAATCAAGGT+TGG 0.565993 1_4:-48575081 Msa0166950:CDS
GGCTTACTATGTCAAAGGAC+AGG 0.566342 1_4:-48570402 Msa0166950:intron
CTAAATTGTGAAGATAATAC+CGG 0.566713 1_4:-48569462 Msa0166950:CDS
GGATCCTTCCAGGTTTGGAA+AGG 0.568977 1_4:-48573884 Msa0166950:intron
CAATCATGATACGGTTGACA+CGG 0.569872 1_4:-48569419 Msa0166950:CDS
GAGACATGAATGATATCCAA+TGG 0.570210 1_4:-48568512 Msa0166950:CDS
GAGGTTATAAAGAATGTGGC+TGG 0.571005 1_4:-48573923 Msa0166950:CDS
TTGGCTACTGATATCATGAA+AGG 0.571245 1_4:+48574914 None:intergenic
GAGTAGTAAGTGTAGGTGCT+TGG 0.573254 1_4:+48570666 None:intergenic
AGTGCTGGAAAAGATGGTGC+AGG 0.576023 1_4:-48566162 Msa0166950:CDS
CTCTCTACTTGTAGCTACCA+GGG 0.577610 1_4:+48566728 None:intergenic
ATTTCACTGCAGCTCCATCA+AGG 0.579262 1_4:+48574337 None:intergenic
GTGCGGGAATGAAGTGTTCG+TGG 0.579769 1_4:+48575743 None:intergenic
GTGACTATGGATATAGCTAT+GGG 0.582699 1_4:-48574581 Msa0166950:CDS
CTCGATGGGATTATTGGTGA+TGG 0.584397 1_4:-48574208 Msa0166950:CDS
GGTAGAGAGCTCGTATGGCA+GGG 0.584644 1_4:-48574478 Msa0166950:CDS
CCTGATTATTAGTTCCGACA+AGG 0.584730 1_4:+48568566 None:intergenic
GATAATACCGGTGATGAAAG+AGG 0.586090 1_4:-48569450 Msa0166950:CDS
CGGGATTTCCATCACAACAC+GGG 0.586430 1_4:+48574713 None:intergenic
GTCACCTTTCCAAACCTGGA+AGG 0.586888 1_4:+48573880 None:intergenic
ACAGTGTACCAGAGAGTGGT+TGG 0.587119 1_4:-48569491 Msa0166950:CDS
TATGGATATAGCTATGGGAA+TGG 0.587377 1_4:-48574576 Msa0166950:CDS
TCAGTTCCCCACACTCTGCA+TGG 0.587821 1_4:+48574868 None:intergenic
CGACCAGATATTGCAACGAT+GGG 0.591304 1_4:+48567626 None:intergenic
TCTCCTACAAAGCAGCAAGA+AGG 0.591457 1_4:-48572898 Msa0166950:CDS
GTGCGAGGCCAATCATGATA+CGG 0.593336 1_4:-48569428 Msa0166950:CDS
GGGTTGGTAGAGAGCTCGTA+TGG 0.593441 1_4:-48574483 Msa0166950:CDS
TGAGTGATGAAGCTGGTGTT+CGG 0.593660 1_4:-48574806 Msa0166950:CDS
CATGGGCTTCAAACTGCGAA+GGG 0.593763 1_4:+48570129 None:intergenic
CAAGGAAATGGTATAGTCTG+TGG 0.597162 1_4:-48570265 Msa0166950:CDS
AGAATTGGTTGATGGAAAGA+CGG 0.598733 1_4:-48575105 Msa0166950:CDS
AGCACCTACACTTACTACTC+AGG 0.600275 1_4:-48570663 Msa0166950:CDS
CGACTGCAATCGAATATATG+TGG 0.600895 1_4:-48568634 Msa0166950:CDS
GTGGCAGCCTTGTATAATGT+AGG 0.606958 1_4:-48565986 Msa0166950:three_prime_UTR
TTTCAGTATCAGCAACACAT+TGG 0.609213 1_4:+48575039 None:intergenic
TAGAAGTAATGTTACAGTGA+GGG 0.611585 1_4:+48566073 None:intergenic
AACACCAGCTTCATCACTCA+CGG 0.612359 1_4:+48574809 None:intergenic
ATATATTTATAACCCTGGAA+AGG 0.612693 1_4:-48574316 Msa0166950:intron
TTTACTACAGGAGCTTCCCA+AGG 0.613778 1_4:-48568676 Msa0166950:intron
TGAAGCCCATGCTGGAATGG+CGG 0.615089 1_4:-48570117 Msa0166950:CDS
ACGACCAGATATTGCAACGA+TGG 0.617395 1_4:+48567625 None:intergenic
TGATGATTATAATAGTGGGT+TGG 0.621646 1_4:-48574499 Msa0166950:CDS
CCGCAGAAGAGAAGTGCTGA+TGG 0.622167 1_4:-48570636 Msa0166950:CDS
GTAGAGAGCTCGTATGGCAG+GGG 0.622368 1_4:-48574477 Msa0166950:CDS
GAGTTGGCTTACTATGTCAA+AGG 0.622870 1_4:-48570407 Msa0166950:CDS
TATTTCTGGCCAAGAATTCG+GGG 0.624320 1_4:-48566921 Msa0166950:CDS
CACAAACAGCACGCCAGATG+AGG 0.626750 1_4:-48573942 Msa0166950:CDS
AATCATGATACGGTTGACAC+GGG 0.627097 1_4:-48569418 Msa0166950:CDS
TTACTTGGAGGTTACAAACA+AGG 0.627097 1_4:-48570283 Msa0166950:CDS
CTGCCATCGGTATAGCCAGT+AGG 0.629361 1_4:+48574609 None:intergenic
TGTTAGCCATGCAGAGTGTG+GGG 0.629545 1_4:-48574874 Msa0166950:CDS
CCAACTCGGCACCATCTGGT+AGG 0.631639 1_4:+48570423 None:intergenic
CTAACATTCTCAGATTCCGT+CGG 0.631916 1_4:+48574891 None:intergenic
ACTCTGCATCCCCTGCAGCA+GGG 0.632470 1_4:+48566470 None:intergenic
CAAATGATGATTATAATAGT+GGG 0.633509 1_4:-48574503 Msa0166950:CDS
GCAGCAGCTCGTGAAAGTAA+CGG 0.635905 1_4:+48568450 None:intergenic
ACTAATAATCAGGAAGCATG+AGG 0.636804 1_4:-48568556 Msa0166950:CDS
TGATATCAGTAGCCAACCGA+CGG 0.638247 1_4:-48574907 Msa0166950:CDS
AATGTTAGCCATGCAGAGTG+TGG 0.640010 1_4:-48574876 Msa0166950:CDS
TCGGGATTTCCATCACAACA+CGG 0.640467 1_4:+48574712 None:intergenic
ACACCTACTGGCTATACCGA+TGG 0.641142 1_4:-48574612 Msa0166950:CDS
AGATGAGGTTATAAAGAATG+TGG 0.645405 1_4:-48573927 Msa0166950:CDS
TATACCTGAGTAGTAAGTGT+AGG 0.646579 1_4:+48570659 None:intergenic
GGGGAAGCTCAGCAATATTG+CGG 0.647399 1_4:+48566748 None:intergenic
TTACACAGTGTACCAGAGAG+TGG 0.650664 1_4:-48569495 Msa0166950:CDS
ACTGGCTATACCGATGGCAG+TGG 0.650962 1_4:-48574606 Msa0166950:CDS
GATGGGATTATTGGTGATGG+TGG 0.652514 1_4:-48574205 Msa0166950:CDS
TGAACCAGACAGCTGATGAG+TGG 0.653688 1_4:-48570856 Msa0166950:CDS
CCATCAGCACTTCTCTTCTG+CGG 0.662514 1_4:+48570636 None:intergenic
AATACAGTAAAATTCTATAG+CGG 0.663217 1_4:+48565860 None:intergenic
TTTGACATAGTAAGCCAACT+CGG 0.664130 1_4:+48570409 None:intergenic
AAGAATTGAAGAGAGCGAAG+AGG 0.668339 1_4:+48575793 None:intergenic
ATTTCTGGCCAAGAATTCGG+GGG 0.674461 1_4:-48566920 Msa0166950:CDS
ATCAGGAAGCATGAGGACAG+GGG 0.674473 1_4:-48568549 Msa0166950:CDS
ATTTGAATTTGAATTCTCAG+AGG 0.674943 1_4:-48575172 Msa0166950:five_prime_UTR
ATAGAAGTAATGTTACAGTG+AGG 0.687941 1_4:+48566072 None:intergenic
GCTGGTTCATCTATCAACGA+GGG 0.690296 1_4:-48573905 Msa0166950:CDS
TCTCTACTTGTAGCTACCAG+GGG 0.693635 1_4:+48566729 None:intergenic
GATACCGTGAGTGATGAAGC+TGG 0.694052 1_4:-48574813 Msa0166950:CDS
TGGAAAGACGGAAAATACCG+AGG 0.709142 1_4:-48575093 Msa0166950:CDS
CTATGGATATGGTTATCACG+GGG 0.709587 1_4:-48574541 Msa0166950:CDS
GGCTGGTTCATCTATCAACG+AGG 0.715047 1_4:-48573906 Msa0166950:CDS
GGTGATGGTGGATATCTGTG+TGG 0.715376 1_4:-48574193 Msa0166950:CDS
GCTACAAGTAGAGAGCATCA+GGG 0.725809 1_4:-48566720 Msa0166950:CDS
ATTTATTCGTGCATGCTGTG+CGG 0.742034 1_4:-48575225 Msa0166950:five_prime_UTR
CCGGTGATGAAAGAGGTGCG+AGG 0.773077 1_4:-48569443 Msa0166950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGAATTTAAATTAATTC+TGG - chr1_4:48566082-48566101 Msa0166950:three_prime_UTR 10.0%
!!! TCTTATATTTTTCAATTATT+AGG - chr1_4:48567342-48567361 Msa0166950:intron 10.0%
!!! CTTTAAAAGATATTATTTTT+AGG + chr1_4:48568780-48568799 None:intergenic 10.0%
!!! CTAAAAATAATATCTTTTAA+AGG - chr1_4:48568778-48568797 Msa0166950:intron 10.0%
!!! CATTTTTTAGAAATTTAATT+AGG - chr1_4:48569306-48569325 Msa0166950:intron 10.0%
!!! ATTTGTTTTTATATTAAACT+TGG - chr1_4:48570129-48570148 Msa0166950:CDS 10.0%
!!! TTTGTTTTTATATTAAACTT+GGG - chr1_4:48570130-48570149 Msa0166950:CDS 10.0%
!!! ATTATTTTCCTTATTTAATT+AGG - chr1_4:48570176-48570195 Msa0166950:intron 10.0%
!! GATATCATATTATAATATTA+TGG - chr1_4:48572028-48572047 Msa0166950:intron 10.0%
!! AAGATAACAATAATATATAA+AGG + chr1_4:48575223-48575242 None:intergenic 10.0%
!! TTGAAAATGATTGAATTAAA+CGG - chr1_4:48566121-48566140 Msa0166950:three_prime_UTR 15.0%
!! ATAAAAACCATAATTAGAAA+CGG + chr1_4:48566273-48566292 None:intergenic 15.0%
!!! AATAGTTTTTTCACATTATT+GGG + chr1_4:48567209-48567228 None:intergenic 15.0%
!!! TAATAGTTTTTTCACATTAT+TGG + chr1_4:48567210-48567229 None:intergenic 15.0%
!! ATAAAAAAAAAAAACAGACT+GGG + chr1_4:48567303-48567322 None:intergenic 15.0%
!! TATAAAAAAAAAAAACAGAC+TGG + chr1_4:48567304-48567323 None:intergenic 15.0%
!! GATTTATTTATCGATATTAT+TGG - chr1_4:48567444-48567463 Msa0166950:intron 15.0%
!! TTTATTATTATTATCATTGC+AGG + chr1_4:48568033-48568052 None:intergenic 15.0%
!! TAATAATAATAAATCCATAG+TGG - chr1_4:48568040-48568059 Msa0166950:intron 15.0%
!! AATAATAATAAATCCATAGT+GGG - chr1_4:48568041-48568060 Msa0166950:intron 15.0%
!!! ATATGTTTATATTTTTTCCA+TGG - chr1_4:48568644-48568663 Msa0166950:CDS 15.0%
!!! ATTATTTTTAGGTTTATTTC+TGG + chr1_4:48568769-48568788 None:intergenic 15.0%
!!! ATAAAAGTATTACTGAAAAA+AGG - chr1_4:48569031-48569050 Msa0166950:intron 15.0%
!! ATCATTGATATGATTTATAA+CGG + chr1_4:48569187-48569206 None:intergenic 15.0%
!! TTACTTATAAACTTATATTC+AGG + chr1_4:48569987-48570006 None:intergenic 15.0%
!! TGAATATAAGTTTATAAGTA+AGG - chr1_4:48569986-48570005 Msa0166950:intron 15.0%
!! GAATATAAGTTTATAAGTAA+GGG - chr1_4:48569987-48570006 Msa0166950:intron 15.0%
!!! TCTAGGATTAATATAAATAA+GGG - chr1_4:48570207-48570226 Msa0166950:intron 15.0%
!!! CAATTTTTAAAAAACATAGA+AGG + chr1_4:48571755-48571774 None:intergenic 15.0%
!!! TTTACTTTCATTTAAGATTA+TGG - chr1_4:48572310-48572329 Msa0166950:intron 15.0%
!!! TTCTACCAATATATTTTTTT+GGG - chr1_4:48572499-48572518 Msa0166950:intron 15.0%
!!! ATATTGAAGTGTTAATTTTT+TGG - chr1_4:48572592-48572611 Msa0166950:intron 15.0%
!!! AAGTCACTTTATATTAAATA+GGG + chr1_4:48573384-48573403 None:intergenic 15.0%
!!! AAAGTCACTTTATATTAAAT+AGG + chr1_4:48573385-48573404 None:intergenic 15.0%
!!! ACTACAATTTATTTTAATGT+TGG - chr1_4:48574009-48574028 Msa0166950:CDS 15.0%
!! ATCACAAGATTAAATATTTA+AGG - chr1_4:48574544-48574563 Msa0166950:CDS 15.0%
!!! TACAATTTTTGTTTTTGTTT+TGG - chr1_4:48575339-48575358 Msa0166950:intron 15.0%
!!! TATATTTTTTTTTGGAGTAT+GGG - chr1_4:48575564-48575583 Msa0166950:intron 15.0%
!! CATGCTAATAAATAAAAAAT+TGG + chr1_4:48575693-48575712 None:intergenic 15.0%
!! TTCGATTCAAAAGTTTATAT+CGG - chr1_4:48566157-48566176 Msa0166950:CDS 20.0%
!! TTAAAAACCGTTTCTAATTA+TGG - chr1_4:48566263-48566282 Msa0166950:intron 20.0%
!!! TAATTATGGTTTTTATCTTC+AGG - chr1_4:48566277-48566296 Msa0166950:intron 20.0%
!!! TTGATTTTCTGTTAGTTATT+AGG - chr1_4:48566381-48566400 Msa0166950:intron 20.0%
!!! TCTTTAGCTTGTTTTTTATT+TGG + chr1_4:48566576-48566595 None:intergenic 20.0%
!!! TTTTAAGTTCAGTAAAAAGA+AGG - chr1_4:48566923-48566942 Msa0166950:CDS 20.0%
!! CAAATGATGATTATAATAGT+GGG - chr1_4:48567075-48567094 Msa0166950:intron 20.0%
!!! ATAGTTTTTTCACATTATTG+GGG + chr1_4:48567208-48567227 None:intergenic 20.0%
!! TCATGTATAATGCTATAAAT+TGG + chr1_4:48567604-48567623 None:intergenic 20.0%
!! ATGTTACATAATACAATAAC+TGG + chr1_4:48567938-48567957 None:intergenic 20.0%
!! AAACAACAATTAATAAGAGA+CGG + chr1_4:48568903-48568922 None:intergenic 20.0%
!!! CTCTTATTAATTGTTGTTTA+AGG - chr1_4:48568904-48568923 Msa0166950:intron 20.0%
!! TCTAACTACTTTAGTAATAA+CGG + chr1_4:48568979-48568998 None:intergenic 20.0%
!! TCATTGATATGATTTATAAC+GGG + chr1_4:48569186-48569205 None:intergenic 20.0%
!! TTTAAACCACAAGAAAATTT+AGG + chr1_4:48569335-48569354 None:intergenic 20.0%
!! AAAACTAAAACAGATGATAT+TGG + chr1_4:48569535-48569554 None:intergenic 20.0%
!! GAAAAATATCTCATAATACT+TGG - chr1_4:48569699-48569718 Msa0166950:intron 20.0%
!! CTCTTAATTCTTAGAAATTA+AGG + chr1_4:48570061-48570080 None:intergenic 20.0%
!!! TTCCTTATTTAATTAGGATT+AGG - chr1_4:48570182-48570201 Msa0166950:intron 20.0%
!!! GTCTAGGATTAATATAAATA+AGG - chr1_4:48570206-48570225 Msa0166950:intron 20.0%
!! TGTAAATTACCTAATTCATT+TGG - chr1_4:48570305-48570324 Msa0166950:intron 20.0%
!! ATCAAAATAAAATAGGTAAG+AGG + chr1_4:48570624-48570643 None:intergenic 20.0%
!! TATATTGTGAATATACAAGA+AGG + chr1_4:48570878-48570897 None:intergenic 20.0%
!!! TTCTCTTAATATTGTGTTTT+TGG - chr1_4:48571211-48571230 Msa0166950:intron 20.0%
!!! CTTTATAACTTTTTGTTCAT+GGG - chr1_4:48571414-48571433 Msa0166950:intron 20.0%
!!! TTCATTTAAGATTATGGTAA+TGG - chr1_4:48572316-48572335 Msa0166950:intron 20.0%
!!! GATATCATTTTGAAATTCAA+TGG + chr1_4:48572408-48572427 None:intergenic 20.0%
!!! CTTCTACCAATATATTTTTT+TGG - chr1_4:48572498-48572517 Msa0166950:intron 20.0%
!!! TAGTTAAGTACAATTTTCAT+CGG + chr1_4:48572701-48572720 None:intergenic 20.0%
!! AATATTTGTGTCAAAAAATC+TGG - chr1_4:48573227-48573246 Msa0166950:intron 20.0%
!! GAAAAATAAATCTCAAAAGT+GGG + chr1_4:48573301-48573320 None:intergenic 20.0%
!! TGTAAAGAATCTTATATCAA+GGG + chr1_4:48573323-48573342 None:intergenic 20.0%
!! TTGTAAAGAATCTTATATCA+AGG + chr1_4:48573324-48573343 None:intergenic 20.0%
!!! AGTCACTTTATATTAAATAG+GGG + chr1_4:48573383-48573402 None:intergenic 20.0%
!! ACTACTTAAGCTATATTTAT+AGG - chr1_4:48573651-48573670 Msa0166950:intron 20.0%
!!! TATTGACTTTTCCTTTAATT+GGG - chr1_4:48573757-48573776 Msa0166950:intron 20.0%
!! AAAAAATAAAGATAGAATGC+TGG + chr1_4:48573882-48573901 None:intergenic 20.0%
!!! ATATTTTTTATTACGAGTCT+TGG - chr1_4:48574371-48574390 Msa0166950:CDS 20.0%
!! TTGGTAAAATATATCATCTT+TGG + chr1_4:48574981-48575000 None:intergenic 20.0%
!! CCAAAAAAAAATATAGGAAA+AGG + chr1_4:48575559-48575578 None:intergenic 20.0%
!!! CCTTTTCCTATATTTTTTTT+TGG - chr1_4:48575556-48575575 Msa0166950:intron 20.0%
!! CATACTCCAAAAAAAAATAT+AGG + chr1_4:48575565-48575584 None:intergenic 20.0%
!!! CTATATTTTTTTTTGGAGTA+TGG - chr1_4:48575563-48575582 Msa0166950:intron 20.0%
!!! AAAAGAGTAAGTTTTGAAAA+TGG - chr1_4:48575617-48575636 Msa0166950:five_prime_UTR 20.0%
!!! AAAGAGTAAGTTTTGAAAAT+GGG - chr1_4:48575618-48575637 Msa0166950:five_prime_UTR 20.0%
!! AATACAGTAAAATTCTATAG+CGG + chr1_4:48575721-48575740 None:intergenic 20.0%
!! GATATTGTTGTACATATTTA+CGG - chr1_4:48575830-48575849 Msa0166950:five_prime_UTR 20.0%
!! GAGATTTGGAGTTTATATAT+GGG + chr1_4:48565813-48565832 None:intergenic 25.0%
!! TGAGATTTGGAGTTTATATA+TGG + chr1_4:48565814-48565833 None:intergenic 25.0%
!!! CAATCATTTTCAAGAATATC+AGG + chr1_4:48566114-48566133 None:intergenic 25.0%
! TTCAAAAGTTTATATCGGAT+TGG - chr1_4:48566162-48566181 Msa0166950:CDS 25.0%
! ATTTGAATTTGAATTCTCAG+AGG - chr1_4:48566406-48566425 Msa0166950:intron 25.0%
!!! TTAGCTTGTTTTTTATTTGG+CGG + chr1_4:48566573-48566592 None:intergenic 25.0%
! AATTTGTGTCAGAATGATAA+AGG - chr1_4:48566819-48566838 Msa0166950:intron 25.0%
! AAAAGTAATCTTTCGAATAC+CGG + chr1_4:48566907-48566926 None:intergenic 25.0%
! GCAAATGATGATTATAATAG+TGG - chr1_4:48567074-48567093 Msa0166950:intron 25.0%
! ATATGTTCCTTATGAAGATT+CGG - chr1_4:48567124-48567143 Msa0166950:intron 25.0%
! GTGAAAAAACTATTATCAAC+CGG - chr1_4:48567215-48567234 Msa0166950:intron 25.0%
! GTGAAATATATTTATAACCC+TGG - chr1_4:48567257-48567276 Msa0166950:intron 25.0%
! ATATATTTATAACCCTGGAA+AGG - chr1_4:48567262-48567281 Msa0166950:intron 25.0%
! TCTAGGAATATGTGATTATT+TGG + chr1_4:48567571-48567590 None:intergenic 25.0%
! AATCACATATTCCTAGAAAA+TGG - chr1_4:48567574-48567593 Msa0166950:intron 25.0%
!!! AAATTGGTTTTCCATTTTCT+AGG + chr1_4:48567588-48567607 None:intergenic 25.0%
!! GAAAATGTGCTAATTTTTGT+GGG - chr1_4:48567808-48567827 Msa0166950:intron 25.0%
!! TTATTCCATAAAAGTGTACT+AGG + chr1_4:48567980-48567999 None:intergenic 25.0%
! CTTATAAATATCGAAGTAGA+TGG + chr1_4:48568189-48568208 None:intergenic 25.0%
! AGAATGCTTGTTTAAACTTT+CGG + chr1_4:48568252-48568271 None:intergenic 25.0%
!!! ATTCTAAAAGCACTTAAAAG+TGG - chr1_4:48568267-48568286 Msa0166950:intron 25.0%
! TGGTATACATATTAGTCATA+TGG - chr1_4:48568552-48568571 Msa0166950:CDS 25.0%
! ACTACATATCAAATAGTAAG+AGG - chr1_4:48568581-48568600 Msa0166950:CDS 25.0%
! AACATATATAAGACAAATCC+AGG + chr1_4:48568631-48568650 None:intergenic 25.0%
! AAACTGAACATGCAATAATT+GGG + chr1_4:48568860-48568879 None:intergenic 25.0%
! GTTATTACTAAAGTAGTTAG+AGG - chr1_4:48568978-48568997 Msa0166950:intron 25.0%
! TGAAAACAAGATCGAAATTT+AGG + chr1_4:48569288-48569307 None:intergenic 25.0%
! ATGATACCATCTTAGAATTT+GGG + chr1_4:48569852-48569871 None:intergenic 25.0%
! TATGATACCATCTTAGAATT+TGG + chr1_4:48569853-48569872 None:intergenic 25.0%
! AGGTAAAATATCATCCAATA+TGG + chr1_4:48569967-48569986 None:intergenic 25.0%
! AATTCTTAGAAATTAAGGCT+TGG + chr1_4:48570056-48570075 None:intergenic 25.0%
! CTCCTAATCCTAATTAAATA+AGG + chr1_4:48570187-48570206 None:intergenic 25.0%
! AAGATATGAGAAAGAACTTA+CGG + chr1_4:48570254-48570273 None:intergenic 25.0%
! AATTTACACACTGAAGTTAT+AGG + chr1_4:48570293-48570312 None:intergenic 25.0%
! TACCTAATTCATTTGGATAT+AGG - chr1_4:48570312-48570331 Msa0166950:intron 25.0%
! CTGGAACATCAAAATAAAAT+AGG + chr1_4:48570631-48570650 None:intergenic 25.0%
! TACTAGAAAATAAACCAAGA+GGG + chr1_4:48570774-48570793 None:intergenic 25.0%
!!! AATTGCATTTTGCTTTTTCA+GGG - chr1_4:48571095-48571114 Msa0166950:intron 25.0%
! CACATGTATAAATATGTAGT+CGG + chr1_4:48571378-48571397 None:intergenic 25.0%
!! GCTTTATAACTTTTTGTTCA+TGG - chr1_4:48571413-48571432 Msa0166950:intron 25.0%
! GTTATTTAACAAACTACTCA+CGG + chr1_4:48571498-48571517 None:intergenic 25.0%
!!! CTACCTTATTTTGTTAATAC+CGG - chr1_4:48571999-48572018 Msa0166950:intron 25.0%
! ATAATATGATATCTTGTTGC+CGG + chr1_4:48572021-48572040 None:intergenic 25.0%
! CTAAATTGTGAAGATAATAC+CGG - chr1_4:48572116-48572135 Msa0166950:intron 25.0%
! CAGTTCCCAAAAAAATATAT+TGG + chr1_4:48572507-48572526 None:intergenic 25.0%
! GATCACAAATTATTACTGTT+CGG + chr1_4:48572663-48572682 None:intergenic 25.0%
!! AACAGTAATAATTTGTGATC+AGG - chr1_4:48572663-48572682 Msa0166950:intron 25.0%
!! TAATAATTTGTGATCAGGTA+TGG - chr1_4:48572668-48572687 Msa0166950:intron 25.0%
!! AGTTAAGTACAATTTTCATC+GGG + chr1_4:48572700-48572719 None:intergenic 25.0%
!!! TCACATGTTATTTTTACTAC+AGG - chr1_4:48572890-48572909 Msa0166950:CDS 25.0%
!!! AAAAGTGGGTTTTATAGTAA+GGG + chr1_4:48573287-48573306 None:intergenic 25.0%
! GGAAAAATAAATCTCAAAAG+TGG + chr1_4:48573302-48573321 None:intergenic 25.0%
! TACCATCTTATAATTGAACT+TGG - chr1_4:48573487-48573506 Msa0166950:intron 25.0%
! ACCATCTTATAATTGAACTT+GGG - chr1_4:48573488-48573507 Msa0166950:intron 25.0%
! ACTACTTAAGCTATATTTCT+AGG - chr1_4:48573570-48573589 Msa0166950:intron 25.0%
! TAGTGTTTATTAGGTTTGAA+CGG + chr1_4:48573635-48573654 None:intergenic 25.0%
! TAGCTTAAGTAGTGTTTATT+AGG + chr1_4:48573563-48573582 None:intergenic 25.0%
!!! CTATTGACTTTTCCTTTAAT+TGG - chr1_4:48573756-48573775 Msa0166950:intron 25.0%
!!! ATTTTAATGTTGGTTGATAG+TGG - chr1_4:48574019-48574038 Msa0166950:CDS 25.0%
! ATGCATATTTATCACAATTC+AGG + chr1_4:48574186-48574205 None:intergenic 25.0%
!! GCTCAATTAAATGTATTTTG+TGG - chr1_4:48574576-48574595 Msa0166950:CDS 25.0%
! CACTATAATATCAGAAAACA+TGG + chr1_4:48574612-48574631 None:intergenic 25.0%
! AATTACTCATATTGAAGAAG+TGG - chr1_4:48574915-48574934 Msa0166950:CDS 25.0%
!!! TTGGTGTTGTAACTAAATTT+TGG - chr1_4:48575458-48575477 Msa0166950:intron 25.0%
!! CTTTTATCCTACATTATACA+AGG + chr1_4:48575602-48575621 None:intergenic 25.0%
!!! AAGAGTAAGTTTTGAAAATG+GGG - chr1_4:48575619-48575638 Msa0166950:five_prime_UTR 25.0%
AATTTCAGTGAATTCGTGTT+TGG - chr1_4:48566325-48566344 Msa0166950:intron 30.0%
ATCAAATGATGAATTGCGTT+CGG - chr1_4:48566599-48566618 Msa0166950:intron 30.0%
TAAGTTCAGTAAAAAGAAGG+AGG - chr1_4:48566926-48566945 Msa0166950:CDS 30.0%
!! TGATGATTATAATAGTGGGT+TGG - chr1_4:48567079-48567098 Msa0166950:intron 30.0%
!!! TTTTTTCACATTATTGGGGA+AGG + chr1_4:48567204-48567223 None:intergenic 30.0%
! GCTAATTTCAATGTTTTCTC+AGG - chr1_4:48567495-48567514 Msa0166950:intron 30.0%
ACATTCTTTATAACCTCATC+TGG + chr1_4:48567652-48567671 None:intergenic 30.0%
AGATGAGGTTATAAAGAATG+TGG - chr1_4:48567651-48567670 Msa0166950:intron 30.0%
! AAAGGTGACAATTATTTCTC+TGG - chr1_4:48567712-48567731 Msa0166950:intron 30.0%
! TCTGGTTTATAATTGCATTG+TGG - chr1_4:48567730-48567749 Msa0166950:intron 30.0%
AACATGAACCGAAAACATAT+AGG + chr1_4:48567758-48567777 None:intergenic 30.0%
! GGAAAATGTGCTAATTTTTG+TGG - chr1_4:48567807-48567826 Msa0166950:intron 30.0%
! TCTTTCCTAGTACACTTTTA+TGG - chr1_4:48567972-48567991 Msa0166950:intron 30.0%
ATAAACCTCTCGTAAATGTA+AGG - chr1_4:48567996-48568015 Msa0166950:intron 30.0%
! TTTTACCTTACATTTACGAG+AGG + chr1_4:48568004-48568023 None:intergenic 30.0%
ATAAAACTCCCACTATAACA+AGG + chr1_4:48568084-48568103 None:intergenic 30.0%
!!! ACTTAAGCTTTTGGAACATT+TGG + chr1_4:48568406-48568425 None:intergenic 30.0%
! TGTTTCTTTTGCTTTGCTTT+TGG - chr1_4:48568604-48568623 Msa0166950:CDS 30.0%
!!! GTGCTGTATTTTTTTTGAGT+TGG + chr1_4:48568708-48568727 None:intergenic 30.0%
AAATACAGCACAAAGTATAC+TGG - chr1_4:48568717-48568736 Msa0166950:intron 30.0%
GTCAAACTTCATTCAGTTTA+AGG + chr1_4:48568814-48568833 None:intergenic 30.0%
CAAACTGAACATGCAATAAT+TGG + chr1_4:48568861-48568880 None:intergenic 30.0%
CAATTATTGCATGTTCAGTT+TGG - chr1_4:48568859-48568878 Msa0166950:intron 30.0%
! TTGATATGATTTATAACGGG+CGG + chr1_4:48569183-48569202 None:intergenic 30.0%
! ATTTTTATTGCAGCATGACT+TGG + chr1_4:48569234-48569253 None:intergenic 30.0%
AATAAAAATTTCCCTGGCTT+TGG - chr1_4:48569245-48569264 Msa0166950:intron 30.0%
AACAAGATCGAAATTTAGGT+TGG + chr1_4:48569284-48569303 None:intergenic 30.0%
ATATCAAATCCAATCCAATG+TGG + chr1_4:48569756-48569775 None:intergenic 30.0%
! ACATTGGATTGGATTTGATA+TGG - chr1_4:48569755-48569774 Msa0166950:intron 30.0%
TTGTGTTAAGAGTTCCATAT+TGG - chr1_4:48569950-48569969 Msa0166950:intron 30.0%
AGTATCTTGAACTTTGTCTT+AGG - chr1_4:48570079-48570098 Msa0166950:intron 30.0%
TTAATTAGGATTAGGAGTCT+AGG - chr1_4:48570190-48570209 Msa0166950:intron 30.0%
TGCCTATATCCAAATGAATT+AGG + chr1_4:48570317-48570336 None:intergenic 30.0%
GTACTAGAAAATAAACCAAG+AGG + chr1_4:48570775-48570794 None:intergenic 30.0%
!! TTGATTTTTGAGCATGTTCT+TGG - chr1_4:48570802-48570821 Msa0166950:intron 30.0%
!! TGATTTTTGAGCATGTTCTT+GGG - chr1_4:48570803-48570822 Msa0166950:intron 30.0%
TGTGAATATACAAGAAGGAA+AGG + chr1_4:48570873-48570892 None:intergenic 30.0%
CTAAGAAAACTCTATTCACA+TGG + chr1_4:48571055-48571074 None:intergenic 30.0%
! CATGTGAATAGAGTTTTCTT+AGG - chr1_4:48571053-48571072 Msa0166950:intron 30.0%
!!! GAATTGCATTTTGCTTTTTC+AGG - chr1_4:48571094-48571113 Msa0166950:intron 30.0%
!!! AGGTTACTTTTTATGCCTAA+TGG - chr1_4:48571132-48571151 Msa0166950:intron 30.0%
! TGTGCTTTTCAGAAATTACT+TGG - chr1_4:48571280-48571299 Msa0166950:intron 30.0%
AAATGGTCAAAACCTTACTA+CGG - chr1_4:48571633-48571652 Msa0166950:intron 30.0%
ACTTGAGAAACTGATATTGT+TGG + chr1_4:48571888-48571907 None:intergenic 30.0%
AAATAAGGTAGAAAGAAACC+AGG + chr1_4:48571990-48572009 None:intergenic 30.0%
TTGCCGGTATTAACAAAATA+AGG + chr1_4:48572005-48572024 None:intergenic 30.0%
TAAAGAACCAGAATATGAAG+TGG - chr1_4:48572187-48572206 Msa0166950:intron 30.0%
AAAGAACCAGAATATGAAGT+GGG - chr1_4:48572188-48572207 Msa0166950:intron 30.0%
ATATCAAAGCAATCACATTC+CGG - chr1_4:48572262-48572281 Msa0166950:intron 30.0%
TATTATGTGTCATGAGATCA+AGG - chr1_4:48572341-48572360 Msa0166950:intron 30.0%
ATTATGTGTCATGAGATCAA+GGG - chr1_4:48572342-48572361 Msa0166950:intron 30.0%
!!! ATATTTTTTTGGGAACTGTG+AGG - chr1_4:48572509-48572528 Msa0166950:intron 30.0%
!!! TATTTTTTTGGGAACTGTGA+GGG - chr1_4:48572510-48572529 Msa0166950:intron 30.0%
AAATAAAGCTTAATGCTGAC+TGG + chr1_4:48572566-48572585 None:intergenic 30.0%
!!! AATTTTTTGGATTGATCGAC+AGG - chr1_4:48572605-48572624 Msa0166950:intron 30.0%
!!! ATTTTTTGGATTGATCGACA+GGG - chr1_4:48572606-48572625 Msa0166950:intron 30.0%
AAGAAAACACAAGTATCACA+CGG + chr1_4:48572855-48572874 None:intergenic 30.0%
! ATCCAATGGAGAATTTTAAG+TGG - chr1_4:48573080-48573099 Msa0166950:intron 30.0%
!!! ATTTTTCGAGTGAGTGTTTA+TGG - chr1_4:48573152-48573171 Msa0166950:intron 30.0%
CCATATACAGCAAAAATTCA+AGG + chr1_4:48573196-48573215 None:intergenic 30.0%
!! CCTTGAATTTTTGCTGTATA+TGG - chr1_4:48573193-48573212 Msa0166950:intron 30.0%
!!! GTCAAAAAATCTGGTTTTCA+TGG - chr1_4:48573236-48573255 Msa0166950:intron 30.0%
!! CAAAAGTGGGTTTTATAGTA+AGG + chr1_4:48573288-48573307 None:intergenic 30.0%
TCCCAAGTTCAATTATAAGA+TGG + chr1_4:48573492-48573511 None:intergenic 30.0%
!! ACTTAAGCTATATTTCTAGG+TGG - chr1_4:48573573-48573592 Msa0166950:intron 30.0%
TTTCCTTTAATTGGGTTTAC+TGG - chr1_4:48573765-48573784 Msa0166950:intron 30.0%
TTCCTTTAATTGGGTTTACT+GGG - chr1_4:48573766-48573785 Msa0166950:intron 30.0%
!!! TTAGGTTGTAGACTAGTTTT+TGG - chr1_4:48573810-48573829 Msa0166950:intron 30.0%
AAATAAAGATAGAATGCTGG+AGG + chr1_4:48573879-48573898 None:intergenic 30.0%
TGATTCCTGTTATGGTATAT+GGG - chr1_4:48573980-48573999 Msa0166950:CDS 30.0%
!! ATTGTGTAAGAGCATGTTTT+AGG - chr1_4:48574286-48574305 Msa0166950:intron 30.0%
!! TTGTGTAAGAGCATGTTTTA+GGG - chr1_4:48574287-48574306 Msa0166950:intron 30.0%
!! GTGTATTTTGAATTTTGTGC+AGG - chr1_4:48574629-48574648 Msa0166950:CDS 30.0%
!! AATATTTCTGGCCAAGAATT+CGG - chr1_4:48574655-48574674 Msa0166950:CDS 30.0%
! TTCCTGATGGTTCTTAATTT+TGG - chr1_4:48574735-48574754 Msa0166950:CDS 30.0%
TTCTCTAAATGTAGAAAAGC+TGG - chr1_4:48575081-48575100 Msa0166950:CDS 30.0%
TCCATTTGGACTAAGAAATT+AGG - chr1_4:48575130-48575149 Msa0166950:CDS 30.0%
AGTTCATCTTCTACATTTAC+TGG - chr1_4:48575182-48575201 Msa0166950:five_prime_UTR 30.0%
TATTGTTATCTTCACTGACA+CGG - chr1_4:48575231-48575250 Msa0166950:five_prime_UTR 30.0%
!! CTTTAAGATGTTTGGTTAAC+TGG + chr1_4:48575365-48575384 None:intergenic 30.0%
GTTAACCAAACATCTTAAAG+AGG - chr1_4:48575365-48575384 Msa0166950:intron 30.0%
!! CGACAGAATGATGTTTTATT+TGG - chr1_4:48575439-48575458 Msa0166950:intron 30.0%
TAGAAGTAATGTTACAGTGA+GGG + chr1_4:48575508-48575527 None:intergenic 30.0%
ATAGAAGTAATGTTACAGTG+AGG + chr1_4:48575509-48575528 None:intergenic 30.0%
ACTCGATTCATGTCTCTTTA+AGG - chr1_4:48565977-48565996 Msa0166950:three_prime_UTR 35.0%
CAAATCCAAACACGTTGAAT+CGG + chr1_4:48566030-48566049 None:intergenic 35.0%
!!! CTCTGTTAGTTGGTTTTGAT+GGG - chr1_4:48566429-48566448 Msa0166950:CDS 35.0%
!! AGAATTGGTTGATGGAAAGA+CGG - chr1_4:48566473-48566492 Msa0166950:CDS 35.0%
TTTCAGTATCAGCAACACAT+TGG + chr1_4:48566542-48566561 None:intergenic 35.0%
TGTTCTGTTGCAGAAACATT+TGG + chr1_4:48566636-48566655 None:intergenic 35.0%
TTGGCTACTGATATCATGAA+AGG + chr1_4:48566667-48566686 None:intergenic 35.0%
AGTGACTATGGATATAGCTA+TGG - chr1_4:48566996-48567015 Msa0166950:intron 35.0%
GTGACTATGGATATAGCTAT+GGG - chr1_4:48566997-48567016 Msa0166950:intron 35.0%
TATGGATATAGCTATGGGAA+TGG - chr1_4:48567002-48567021 Msa0166950:intron 35.0%
TACAACTCCGAATCTTCATA+AGG + chr1_4:48567134-48567153 None:intergenic 35.0%
!! AATTATTAGGTTGAGCTCGA+TGG - chr1_4:48567355-48567374 Msa0166950:intron 35.0%
!! ATTATTAGGTTGAGCTCGAT+GGG - chr1_4:48567356-48567375 Msa0166950:intron 35.0%
! TTGTGGAGCCTATATGTTTT+CGG - chr1_4:48567747-48567766 Msa0166950:intron 35.0%
TCAAATAATGACATGTGTGC+TGG - chr1_4:48567785-48567804 Msa0166950:intron 35.0%
CAAATAATGACATGTGTGCT+GGG - chr1_4:48567786-48567805 Msa0166950:intron 35.0%
ATTCTTTGCTGGCAAGTTAT+TGG - chr1_4:48567836-48567855 Msa0166950:intron 35.0%
CTCAAGTCAAAAGATAAGAG+AGG + chr1_4:48568123-48568142 None:intergenic 35.0%
!!! CTTTTGGAACATTTGGTGAT+GGG + chr1_4:48568399-48568418 None:intergenic 35.0%
! TTCCAAAAGCTTAAGTTGCT+AGG - chr1_4:48568410-48568429 Msa0166950:intron 35.0%
ATGTATACCAATGCAAGTTG+CGG + chr1_4:48568542-48568561 None:intergenic 35.0%
GTTTACCTGTTGTATGTATG+AGG + chr1_4:48568747-48568766 None:intergenic 35.0%
ATTGGGTCCAAACTGAATTT+GGG + chr1_4:48568843-48568862 None:intergenic 35.0%
AATTGGGTCCAAACTGAATT+TGG + chr1_4:48568844-48568863 None:intergenic 35.0%
TGCTGCAATAAAAATTTCCC+TGG - chr1_4:48569239-48569258 Msa0166950:intron 35.0%
! AGGTCTCCTAAATTTTCTTG+TGG - chr1_4:48569326-48569345 Msa0166950:intron 35.0%
GATCGTTAATGGAAATTTCC+TGG + chr1_4:48569509-48569528 None:intergenic 35.0%
GATATTGGACTGATCGTTAA+TGG + chr1_4:48569520-48569539 None:intergenic 35.0%
TTCACAAAACATGACTGCAA+AGG + chr1_4:48569583-48569602 None:intergenic 35.0%
CTAACAACCAACAAGCTTAA+TGG - chr1_4:48569638-48569657 Msa0166950:intron 35.0%
TCACTAACCATTAAGCTTGT+TGG + chr1_4:48569648-48569667 None:intergenic 35.0%
!! ATGTGTTAAGAGTACCACAT+TGG - chr1_4:48569739-48569758 Msa0166950:intron 35.0%
!! TTAAGAGTACCACATTGGAT+TGG - chr1_4:48569744-48569763 Msa0166950:intron 35.0%
! ACCATCTTAGAATTTGGGTT+GGG + chr1_4:48569847-48569866 None:intergenic 35.0%
TACCATCTTAGAATTTGGGT+TGG + chr1_4:48569848-48569867 None:intergenic 35.0%
ATAGTTTATCCAAGATCCGT+CGG - chr1_4:48569870-48569889 Msa0166950:intron 35.0%
AGGCAACCTTCTTAGAATTA+AGG - chr1_4:48570332-48570351 Msa0166950:intron 35.0%
ACCTTCTTAGAATTAAGGCT+TGG - chr1_4:48570337-48570356 Msa0166950:intron 35.0%
TAGTTCAACCCTTACAAAAC+CGG - chr1_4:48570362-48570381 Msa0166950:intron 35.0%
!! AATTAGTCTTATCCACAAGC+CGG + chr1_4:48570384-48570403 None:intergenic 35.0%
! CTAAGTTTTCAGAAATGCTG+TGG + chr1_4:48570413-48570432 None:intergenic 35.0%
TTGATGTTCCAGTCAATCTA+TGG - chr1_4:48570639-48570658 Msa0166950:CDS 35.0%
TATACCTGAGTAGTAAGTGT+AGG + chr1_4:48570922-48570941 None:intergenic 35.0%
TTTGACATAGTAAGCCAACT+CGG + chr1_4:48571172-48571191 None:intergenic 35.0%
! GCTTTTCAGAAATTACTTGG+AGG - chr1_4:48571283-48571302 Msa0166950:intron 35.0%
TTACTTGGAGGTTACAAACA+AGG - chr1_4:48571295-48571314 Msa0166950:intron 35.0%
GTTGTTGTGATATAGAGGTA+CGG - chr1_4:48571335-48571354 Msa0166950:intron 35.0%
! ATCCATTGGAAGCATATATG+TGG + chr1_4:48571582-48571601 None:intergenic 35.0%
! ATCATGAAGTGTCAATCCAT+TGG + chr1_4:48571596-48571615 None:intergenic 35.0%
ATAGCTCTCTCTTTAGCAAA+TGG - chr1_4:48571616-48571635 Msa0166950:intron 35.0%
AATGGTCAAAACCTTACTAC+GGG - chr1_4:48571634-48571653 Msa0166950:intron 35.0%
GGAGATTTGATTCTTTGCAA+TGG - chr1_4:48571694-48571713 Msa0166950:intron 35.0%
CTGCTAAAGATAGTTCAGTT+TGG - chr1_4:48572446-48572465 Msa0166950:intron 35.0%
!!! TGTTATTTTCCAGTGTGAGA+AGG - chr1_4:48572755-48572774 Msa0166950:intron 35.0%
! TCACACGGATATTTTCTACA+AGG + chr1_4:48572840-48572859 None:intergenic 35.0%
CAACAAAACCACTTATCCTT+GGG + chr1_4:48572921-48572940 None:intergenic 35.0%
! ACTAATAATCAGGAAGCATG+AGG - chr1_4:48573022-48573041 Msa0166950:intron 35.0%
GAGACATGAATGATATCCAA+TGG - chr1_4:48573066-48573085 Msa0166950:intron 35.0%
! TGCCACTTAAAATTCTCCAT+TGG + chr1_4:48573085-48573104 None:intergenic 35.0%
! TGTTGGTCAACAATGGATTT+AGG - chr1_4:48573453-48573472 Msa0166950:intron 35.0%
! CAAGATCATTTTGCAAAACG+AGG - chr1_4:48573527-48573546 Msa0166950:intron 35.0%
GGAAAAGTCAATAGTTGCTT+TGG + chr1_4:48573750-48573769 None:intergenic 35.0%
ATCCCAGTAAACCCAATTAA+AGG + chr1_4:48573771-48573790 None:intergenic 35.0%
TTTAATTGGGTTTACTGGGA+TGG - chr1_4:48573770-48573789 Msa0166950:intron 35.0%
TTAATTGGGTTTACTGGGAT+GGG - chr1_4:48573771-48573790 Msa0166950:intron 35.0%
CATATACCATAACAGGAATC+AGG + chr1_4:48573981-48574000 None:intergenic 35.0%
CTGATTCCTGTTATGGTATA+TGG - chr1_4:48573979-48573998 Msa0166950:CDS 35.0%
AGGTTGTATAGACTATAGAG+AGG + chr1_4:48574048-48574067 None:intergenic 35.0%
TTAGCTTCAACATATGGCAT+TGG + chr1_4:48574162-48574181 None:intergenic 35.0%
! TCAGGTTTAGCTTCAACATA+TGG + chr1_4:48574168-48574187 None:intergenic 35.0%
! TTTCCATCGACCATTGATTA+TGG + chr1_4:48574243-48574262 None:intergenic 35.0%
GAAAAAATTCCTGTGAACGA+TGG + chr1_4:48574334-48574353 None:intergenic 35.0%
ATGATGCATTTGTCAACAGT+GGG - chr1_4:48574423-48574442 Msa0166950:CDS 35.0%
TCCTTAACTAGTGTCCTTAT+GGG + chr1_4:48574497-48574516 None:intergenic 35.0%
TTCCTTAACTAGTGTCCTTA+TGG + chr1_4:48574498-48574517 None:intergenic 35.0%
CTAGTTAAGGAATCAATGCA+CGG - chr1_4:48574506-48574525 Msa0166950:CDS 35.0%
TAGTTAAGGAATCAATGCAC+GGG - chr1_4:48574507-48574526 Msa0166950:CDS 35.0%
!! ATATTTCTGGCCAAGAATTC+GGG - chr1_4:48574656-48574675 Msa0166950:CDS 35.0%
!!! TTGCTTTCTTGTTTTCCTGA+TGG - chr1_4:48574722-48574741 Msa0166950:CDS 35.0%
GACCAAAATTAAGAACCATC+AGG + chr1_4:48574740-48574759 None:intergenic 35.0%
AGTTCTATTGTAGTATCTGC+CGG - chr1_4:48574789-48574808 Msa0166950:CDS 35.0%
ATGTTAATGGAGCTTATCGT+TGG + chr1_4:48575000-48575019 None:intergenic 35.0%
AAGGGAAAATCGCATGTTAA+TGG + chr1_4:48575013-48575032 None:intergenic 35.0%
GCTTGAAAATAACCCTGAAA+GGG + chr1_4:48575031-48575050 None:intergenic 35.0%
GCCTAATTTCTTAGTCCAAA+TGG + chr1_4:48575134-48575153 None:intergenic 35.0%
TTTCTTCCAATTCTGAACAC+AGG + chr1_4:48575282-48575301 None:intergenic 35.0%
!! CACTGATGTTTTGTTGAAGA+GGG + chr1_4:48575400-48575419 None:intergenic 35.0%
TACTTCTATGTTCTTGCTCT+TGG - chr1_4:48575520-48575539 Msa0166950:intron 35.0%
TCCTCTACTTCTACCAATTT+AGG + chr1_4:48575652-48575671 None:intergenic 35.0%
! TCATGTTGAATTGACTTCCA+TGG - chr1_4:48575762-48575781 Msa0166950:five_prime_UTR 35.0%
AAGAATTGAAGAGAGCGAAG+AGG + chr1_4:48565788-48565807 None:intergenic 40.0%
AAGTGTTCGTGGTTGAGATT+TGG + chr1_4:48565827-48565846 None:intergenic 40.0%
! AGAGTGTTAGGGTTTGGTTT+AGG + chr1_4:48565891-48565910 None:intergenic 40.0%
!! TTGGAGAGAGAAGAGTGTTA+GGG + chr1_4:48565902-48565921 None:intergenic 40.0%
!! ATTGGAGAGAGAAGAGTGTT+AGG + chr1_4:48565903-48565922 None:intergenic 40.0%
! AGAAGTGTAGTGAAGGAGAT+TGG + chr1_4:48565921-48565940 None:intergenic 40.0%
! AACAGTGAGAAGTGTAGTGA+AGG + chr1_4:48565928-48565947 None:intergenic 40.0%
!! TCTTACCGATTCAACGTGTT+TGG - chr1_4:48566022-48566041 Msa0166950:three_prime_UTR 40.0%
CAGCATGCACGAATAAATCA+AGG + chr1_4:48566351-48566370 None:intergenic 40.0%
ATTTATTCGTGCATGCTGTG+CGG - chr1_4:48566353-48566372 Msa0166950:intron 40.0%
!!! GCTCTGTTAGTTGGTTTTGA+TGG - chr1_4:48566428-48566447 Msa0166950:CDS 40.0%
AGCAGTTTGTGTGCAAGAAT+TGG - chr1_4:48566458-48566477 Msa0166950:CDS 40.0%
TGTGTGCAAGAATTGGTTGA+TGG - chr1_4:48566465-48566484 Msa0166950:CDS 40.0%
AAATACCGAGGAATCAAGGT+TGG - chr1_4:48566497-48566516 Msa0166950:CDS 40.0%
CAATTCCAACCTTGATTCCT+CGG + chr1_4:48566505-48566524 None:intergenic 40.0%
CTAACATTCTCAGATTCCGT+CGG + chr1_4:48566690-48566709 None:intergenic 40.0%
GATGATTACCAAACACCTAC+TGG - chr1_4:48566954-48566973 Msa0166950:intron 40.0%
AGTGGATATGGCTATGGATA+TGG - chr1_4:48567026-48567045 Msa0166950:intron 40.0%
GGCTATGGATATGGTTATCA+CGG - chr1_4:48567035-48567054 Msa0166950:intron 40.0%
GCTATGGATATGGTTATCAC+GGG - chr1_4:48567036-48567055 Msa0166950:intron 40.0%
CTATGGATATGGTTATCACG+GGG - chr1_4:48567037-48567056 Msa0166950:intron 40.0%
TCACGGGGATGATGAATATT+TGG - chr1_4:48567052-48567071 Msa0166950:intron 40.0%
GAAGATTCGGAGTTGTATTC+TGG - chr1_4:48567137-48567156 Msa0166950:intron 40.0%
GGAGTTGTATTCTGGCAATA+TGG - chr1_4:48567145-48567164 Msa0166950:intron 40.0%
TTATCAACCGGTATCCTTGA+TGG - chr1_4:48567227-48567246 Msa0166950:intron 40.0%
ATCTGCTCTTTACCTTTCCA+GGG + chr1_4:48567277-48567296 None:intergenic 40.0%
AATCTGCTCTTTACCTTTCC+AGG + chr1_4:48567278-48567297 None:intergenic 40.0%
GAGGTTATAAAGAATGTGGC+TGG - chr1_4:48567655-48567674 Msa0166950:intron 40.0%
AATTGTCACCTTTCCAAACC+TGG + chr1_4:48567705-48567724 None:intergenic 40.0%
TGTGGGTTTAGATTCTTTGC+TGG - chr1_4:48567825-48567844 Msa0166950:intron 40.0%
ACTATAACAAGGTCCAAGGA+AGG + chr1_4:48568073-48568092 None:intergenic 40.0%
! TTCCTTGGACCTTGTTATAG+TGG - chr1_4:48568072-48568091 Msa0166950:intron 40.0%
! TCCTTGGACCTTGTTATAGT+GGG - chr1_4:48568073-48568092 Msa0166950:intron 40.0%
GATAAGAGAGGAGAACAATC+TGG + chr1_4:48568111-48568130 None:intergenic 40.0%
TCGCAATCATGATAGTCGTT+TGG - chr1_4:48568348-48568367 Msa0166950:intron 40.0%
AGTCGTTTGGTCTATCATCT+AGG - chr1_4:48568361-48568380 Msa0166950:intron 40.0%
!!! GCTTTTGGAACATTTGGTGA+TGG + chr1_4:48568400-48568419 None:intergenic 40.0%
! CACCTAGCAACTTAAGCTTT+TGG + chr1_4:48568415-48568434 None:intergenic 40.0%
TTATCATTGCACAGCATCCA+CGG - chr1_4:48568465-48568484 Msa0166950:CDS 40.0%
!! TTTTGCTTTGCTTTTGGACC+TGG - chr1_4:48568610-48568629 Msa0166950:CDS 40.0%
GACGGAGAGAATAATAACTG+AGG + chr1_4:48568885-48568904 None:intergenic 40.0%
!! AAGTAGTTAGAGGCATCGTT+AGG - chr1_4:48568988-48569007 Msa0166950:intron 40.0%
!! TATGATTTATAACGGGCGGT+TGG + chr1_4:48569179-48569198 None:intergenic 40.0%
! ATGGTTAGTGAGCTTTAGCT+TGG - chr1_4:48569657-48569676 Msa0166950:intron 40.0%
!! TTAGTGAGCTTTAGCTTGGT+GGG - chr1_4:48569661-48569680 Msa0166950:intron 40.0%
ACCTTGCAAACCTGTTGTAA+GGG - chr1_4:48569811-48569830 Msa0166950:intron 40.0%
TAGTTTATCCAAGATCCGTC+GGG - chr1_4:48569871-48569890 Msa0166950:intron 40.0%
AAGTTCAACCCTCACAAAAG+CGG + chr1_4:48570031-48570050 None:intergenic 40.0%
GAAAGAACTTACGGAGACTA+TGG + chr1_4:48570245-48570264 None:intergenic 40.0%
! GCCAAGCCTTAATTCTAAGA+AGG + chr1_4:48570341-48570360 None:intergenic 40.0%
!! GGTTTTGTAAGGGTTGAACT+AGG + chr1_4:48570363-48570382 None:intergenic 40.0%
! CTGAGTTTTCAGAAATGCTG+TGG + chr1_4:48570515-48570534 None:intergenic 40.0%
CTGATGGTTGCACTAAGAAA+AGG - chr1_4:48570958-48570977 Msa0166950:intron 40.0%
! GAGTTGGCTTACTATGTCAA+AGG - chr1_4:48571171-48571190 Msa0166950:intron 40.0%
GGAGGTTACAAACAAGGAAA+TGG - chr1_4:48571301-48571320 Msa0166950:intron 40.0%
CAAGGAAATGGTATAGTCTG+TGG - chr1_4:48571313-48571332 Msa0166950:intron 40.0%
CTGTGGTTGTTGTGATATAG+AGG - chr1_4:48571330-48571349 Msa0166950:intron 40.0%
AGGTACGGTCATATACCTAT+TGG - chr1_4:48571350-48571369 Msa0166950:intron 40.0%
!! AATATGTAGTCGGTGCCAAT+AGG + chr1_4:48571368-48571387 None:intergenic 40.0%
! CATTGGAAGCATATATGTGG+CGG + chr1_4:48571579-48571598 None:intergenic 40.0%
TTCTTTGCAATGGATGTCCT+AGG - chr1_4:48571704-48571723 Msa0166950:intron 40.0%
TCTTTGCAATGGATGTCCTA+GGG - chr1_4:48571705-48571724 Msa0166950:intron 40.0%
AATACTGCACTGGATAACAG+AGG + chr1_4:48571938-48571957 None:intergenic 40.0%
!! GATGAAGTTTGTTGCATACC+TGG - chr1_4:48571969-48571988 Msa0166950:intron 40.0%
ATTTCAATTGCAGCCTGCTT+AGG - chr1_4:48572059-48572078 Msa0166950:intron 40.0%
TACACTGTGTAAACCTAAGC+AGG + chr1_4:48572075-48572094 None:intergenic 40.0%
GATAATACCGGTGATGAAAG+AGG - chr1_4:48572128-48572147 Msa0166950:intron 40.0%
CAATCATGATACGGTTGACA+CGG - chr1_4:48572159-48572178 Msa0166950:intron 40.0%
AATCATGATACGGTTGACAC+GGG - chr1_4:48572160-48572179 Msa0166950:intron 40.0%
ATCACATTCCGGCAACTTTA+TGG - chr1_4:48572273-48572292 Msa0166950:intron 40.0%
ATTCCGGCAACTTTATGGAA+AGG - chr1_4:48572278-48572297 Msa0166950:intron 40.0%
CATCCTTTCCATAAAGTTGC+CGG + chr1_4:48572284-48572303 None:intergenic 40.0%
!! TGTGAGAAGGAGTATCATGT+TGG - chr1_4:48572768-48572787 Msa0166950:intron 40.0%
! AGTATCATGTTGGTTGCTTG+CGG - chr1_4:48572778-48572797 Msa0166950:intron 40.0%
! CGGATATTTTCTACAAGGCT+TGG + chr1_4:48572835-48572854 None:intergenic 40.0%
GCAACAAAACCACTTATCCT+TGG + chr1_4:48572922-48572941 None:intergenic 40.0%
CGACTGCAATCGAATATATG+TGG - chr1_4:48572944-48572963 Msa0166950:intron 40.0%
TACCATACCATCTTCCTTGT+CGG - chr1_4:48572998-48573017 Msa0166950:intron 40.0%
ATTAGTTCCGACAAGGAAGA+TGG + chr1_4:48573008-48573027 None:intergenic 40.0%
CCTGATTATTAGTTCCGACA+AGG + chr1_4:48573015-48573034 None:intergenic 40.0%
CCTTGTCGGAACTAATAATC+AGG - chr1_4:48573012-48573031 Msa0166950:intron 40.0%
TACATACCCTTTCACACCTA+GGG - chr1_4:48573407-48573426 Msa0166950:intron 40.0%
CTATAACCCTAGGTGTGAAA+GGG + chr1_4:48573416-48573435 None:intergenic 40.0%
TGGACAATGTTGGTCAACAA+TGG - chr1_4:48573446-48573465 Msa0166950:intron 40.0%
TAATTGGGTTTACTGGGATG+GGG - chr1_4:48573772-48573791 Msa0166950:intron 40.0%
! ACTGCATTTTGTTCATGCTC+TGG - chr1_4:48573903-48573922 Msa0166950:CDS 40.0%
GCTTACCCATATACCATAAC+AGG + chr1_4:48573988-48574007 None:intergenic 40.0%
! ACTGAAAGCACGAGAAAAGA+AGG + chr1_4:48574068-48574087 None:intergenic 40.0%
ATTGATTATGGAGAGGAGAG+GGG + chr1_4:48574231-48574250 None:intergenic 40.0%
! CATTGATTATGGAGAGGAGA+GGG + chr1_4:48574232-48574251 None:intergenic 40.0%
! ATCGACCATTGATTATGGAG+AGG + chr1_4:48574238-48574257 None:intergenic 40.0%
TCTCCATAATCAATGGTCGA+TGG - chr1_4:48574237-48574256 Msa0166950:intron 40.0%
CGATGGAAAACCTAGTTGAT+AGG - chr1_4:48574254-48574273 Msa0166950:intron 40.0%
GATGATGCATTTGTCAACAG+TGG - chr1_4:48574422-48574441 Msa0166950:CDS 40.0%
TTGTGCAGGCGAAATATTTC+TGG - chr1_4:48574643-48574662 Msa0166950:CDS 40.0%
!! TATTTCTGGCCAAGAATTCG+GGG - chr1_4:48574657-48574676 Msa0166950:CDS 40.0%
AATACATTCCCCCGAATTCT+TGG + chr1_4:48574669-48574688 None:intergenic 40.0%
GTTCTATTGTAGTATCTGCC+GGG - chr1_4:48574790-48574809 Msa0166950:CDS 40.0%
! AACATGCGATTTTCCCTTTC+AGG - chr1_4:48575015-48575034 Msa0166950:CDS 40.0%
! ACATGCGATTTTCCCTTTCA+GGG - chr1_4:48575016-48575035 Msa0166950:CDS 40.0%
CGCTTGAAAATAACCCTGAA+AGG + chr1_4:48575032-48575051 None:intergenic 40.0%
TCACAAGATGAGTGAAGATC+AGG - chr1_4:48575156-48575175 Msa0166950:five_prime_UTR 40.0%
TGTTGACCTGTGTTCAGAAT+TGG - chr1_4:48575273-48575292 Msa0166950:five_prime_UTR 40.0%
!! CTGCACCTCTTTAAGATGTT+TGG + chr1_4:48575373-48575392 None:intergenic 40.0%
!! GCACTGATGTTTTGTTGAAG+AGG + chr1_4:48575401-48575420 None:intergenic 40.0%
CTTCAACAAAACATCAGTGC+TGG - chr1_4:48575401-48575420 Msa0166950:intron 40.0%
! AACATCAGTGCTGGAAAAGA+TGG - chr1_4:48575410-48575429 Msa0166950:intron 40.0%
!!! TTTTGGAGTATGGGTGATTG+TGG - chr1_4:48575573-48575592 Msa0166950:intron 40.0%
!!! AGTTTTGAAAATGGGGAACG+TGG - chr1_4:48575626-48575645 Msa0166950:five_prime_UTR 40.0%
GCCTAAATTGGTAGAAGTAG+AGG - chr1_4:48575648-48575667 Msa0166950:five_prime_UTR 40.0%
! GAATTGACTTCCATGGTTCT+TGG - chr1_4:48575769-48575788 Msa0166950:five_prime_UTR 40.0%
! AGAGAAAAGTGAGAGAGTGC+GGG + chr1_4:48565854-48565873 None:intergenic 45.0%
GAGAGAAAAGTGAGAGAGTG+CGG + chr1_4:48565855-48565874 None:intergenic 45.0%
! GGGTTTGGTTTAGGAACGAA+AGG + chr1_4:48565882-48565901 None:intergenic 45.0%
!! GAGAGAAGAGTGTTAGGGTT+TGG + chr1_4:48565897-48565916 None:intergenic 45.0%
TTCTCAGAGGCTCTGTTAGT+TGG - chr1_4:48566419-48566438 Msa0166950:intron 45.0%
TGGAAAGACGGAAAATACCG+AGG - chr1_4:48566485-48566504 Msa0166950:CDS 45.0%
CGGAAAATACCGAGGAATCA+AGG - chr1_4:48566493-48566512 Msa0166950:CDS 45.0%
TGATATCAGTAGCCAACCGA+CGG - chr1_4:48566671-48566690 Msa0166950:intron 45.0%
AATGTTAGCCATGCAGAGTG+TGG - chr1_4:48566702-48566721 Msa0166950:intron 45.0%
ATGTTAGCCATGCAGAGTGT+GGG - chr1_4:48566703-48566722 Msa0166950:intron 45.0%
! GGAACTGACATCTACTGGTT+TGG - chr1_4:48566725-48566744 Msa0166950:CDS 45.0%
ACTCACGGTATCATGAGAAC+TGG + chr1_4:48566757-48566776 None:intergenic 45.0%
AACACCAGCTTCATCACTCA+CGG + chr1_4:48566772-48566791 None:intergenic 45.0%
TGAGTGATGAAGCTGGTGTT+CGG - chr1_4:48566772-48566791 Msa0166950:CDS 45.0%
TCGGGATTTCCATCACAACA+CGG + chr1_4:48566869-48566888 None:intergenic 45.0%
TATAGCTATGGGAATGGCAG+TGG - chr1_4:48567008-48567027 Msa0166950:intron 45.0%
TATGGGAATGGCAGTGGATA+TGG - chr1_4:48567014-48567033 Msa0166950:intron 45.0%
AATGGCAGTGGATATGGCTA+TGG - chr1_4:48567020-48567039 Msa0166950:intron 45.0%
!! ACATTATTGGGGAAGGCGTT+TGG + chr1_4:48567197-48567216 None:intergenic 45.0%
ATTTCACTGCAGCTCCATCA+AGG + chr1_4:48567244-48567263 None:intergenic 45.0%
GTTGAGCTCGATGGGATTAT+TGG - chr1_4:48567364-48567383 Msa0166950:intron 45.0%
CTCGATGGGATTATTGGTGA+TGG - chr1_4:48567370-48567389 Msa0166950:intron 45.0%
!! GATGGGATTATTGGTGATGG+TGG - chr1_4:48567373-48567392 Msa0166950:intron 45.0%
AGCATGCTGCTCAAACTCAT+AGG + chr1_4:48567530-48567549 None:intergenic 45.0%
TATGAGTTTGAGCAGCATGC+TGG - chr1_4:48567529-48567548 Msa0166950:intron 45.0%
! GCTGGTTCATCTATCAACGA+GGG - chr1_4:48567673-48567692 Msa0166950:intron 45.0%
TCCCACTATAACAAGGTCCA+AGG + chr1_4:48568077-48568096 None:intergenic 45.0%
TTTCTATTCCTTCCCATCCG+TGG + chr1_4:48568485-48568504 None:intergenic 45.0%
TTGTTTGCCGCAACTTGCAT+TGG - chr1_4:48568532-48568551 Msa0166950:CDS 45.0%
GAGACTTTCTGCAGAATCCA+TGG + chr1_4:48568664-48568683 None:intergenic 45.0%
TCTCCTACAAAGCAGCAAGA+AGG - chr1_4:48568680-48568699 Msa0166950:intron 45.0%
!! GAACCTTCTTGCTGCTTTGT+AGG + chr1_4:48568686-48568705 None:intergenic 45.0%
GCATGCCTCATACATACAAC+AGG - chr1_4:48568739-48568758 Msa0166950:intron 45.0%
CGTACCACCCAAATTCAGTT+TGG - chr1_4:48568833-48568852 Msa0166950:intron 45.0%
!! TAGTTAGAGGCATCGTTAGG+TGG - chr1_4:48568991-48569010 Msa0166950:intron 45.0%
TGGCGGAATTCAAGAAGTCT+TGG - chr1_4:48569474-48569493 Msa0166950:CDS 45.0%
! AAGTCTTGGTTCTTGTTGCC+AGG - chr1_4:48569488-48569507 Msa0166950:CDS 45.0%
! ATGACTGCAAAGGCACATGA+TGG + chr1_4:48569573-48569592 None:intergenic 45.0%
!! GTTAGTGAGCTTTAGCTTGG+TGG - chr1_4:48569660-48569679 Msa0166950:intron 45.0%
!! TAGTGAGCTTTAGCTTGGTG+GGG - chr1_4:48569662-48569681 Msa0166950:intron 45.0%
TACAACAGGTTTGCAAGGTG+AGG + chr1_4:48569810-48569829 None:intergenic 45.0%
CACCTTGCAAACCTGTTGTA+AGG - chr1_4:48569810-48569829 Msa0166950:intron 45.0%
ACCCTTACAACAGGTTTGCA+AGG + chr1_4:48569815-48569834 None:intergenic 45.0%
CCTAACTCAACCCTTACAAC+AGG + chr1_4:48569824-48569843 None:intergenic 45.0%
CCTGTTGTAAGGGTTGAGTT+AGG - chr1_4:48569821-48569840 Msa0166950:intron 45.0%
! GCCCAACCCAAATTCTAAGA+TGG - chr1_4:48569843-48569862 Msa0166950:intron 45.0%
CACTCCATATGTCCAATCCT+AGG - chr1_4:48569917-48569936 Msa0166950:intron 45.0%
CAAAAGCGGCTTGTAAGGTA+AGG + chr1_4:48570017-48570036 None:intergenic 45.0%
!!! CTTACAAGCCGCTTTTGTGA+GGG - chr1_4:48570020-48570039 Msa0166950:intron 45.0%
! GCTTTTGTGAGGGTTGAACT+TGG - chr1_4:48570030-48570049 Msa0166950:intron 45.0%
!! TCCACAAGCCGGTTTTGTAA+GGG + chr1_4:48570373-48570392 None:intergenic 45.0%
!! ATCCACAAGCCGGTTTTGTA+AGG + chr1_4:48570374-48570393 None:intergenic 45.0%
CGCACTTTCCATAGATTGAC+TGG + chr1_4:48570650-48570669 None:intergenic 45.0%
! AAGAAGTGTGTTCTCCCTCT+TGG - chr1_4:48570757-48570776 Msa0166950:intron 45.0%
GAGTAGTAAGTGTAGGTGCT+TGG + chr1_4:48570915-48570934 None:intergenic 45.0%
AGCACCTACACTTACTACTC+AGG - chr1_4:48570915-48570934 Msa0166950:CDS 45.0%
GGCTTACTATGTCAAAGGAC+AGG - chr1_4:48571176-48571195 Msa0166950:intron 45.0%
ATGTGGCGGTAACTGCAAAA+AGG + chr1_4:48571565-48571584 None:intergenic 45.0%
CGCCACATATATGCTTCCAA+TGG - chr1_4:48571577-48571596 Msa0166950:intron 45.0%
GACGATATGTGTGCAGTATG+TGG - chr1_4:48571664-48571683 Msa0166950:intron 45.0%
ATGTGTGCAGTATGTGGAGA+TGG - chr1_4:48571670-48571689 Msa0166950:intron 45.0%
GTCACTGTCTAATACTGCAC+TGG + chr1_4:48571948-48571967 None:intergenic 45.0%
TTACACAGTGTACCAGAGAG+TGG - chr1_4:48572083-48572102 Msa0166950:intron 45.0%
CGTGTCAACCGTATCATGAT+TGG + chr1_4:48572161-48572180 None:intergenic 45.0%
GAACCAGAATATGAAGTGGG+TGG - chr1_4:48572191-48572210 Msa0166950:intron 45.0%
CATCCACCCACTTCATATTC+TGG + chr1_4:48572197-48572216 None:intergenic 45.0%
CATGATACTCCTTCTCACAC+TGG + chr1_4:48572767-48572786 None:intergenic 45.0%
! GTATCATGTTGGTTGCTTGC+GGG - chr1_4:48572779-48572798 Msa0166950:intron 45.0%
TTTACTACAGGAGCTTCCCA+AGG - chr1_4:48572902-48572921 Msa0166950:CDS 45.0%
TTCCGACAAGGAAGATGGTA+TGG + chr1_4:48573003-48573022 None:intergenic 45.0%
! TAATCAGGAAGCATGAGGAC+AGG - chr1_4:48573027-48573046 Msa0166950:intron 45.0%
! AATCAGGAAGCATGAGGACA+GGG - chr1_4:48573028-48573047 Msa0166950:intron 45.0%
GACAGGGGATTATGTACGTA+TGG - chr1_4:48573044-48573063 Msa0166950:intron 45.0%
!! GGGACAGAGAGTATTGTGTA+AGG + chr1_4:48573267-48573286 None:intergenic 45.0%
CTACATACCCTTTCACACCT+AGG - chr1_4:48573406-48573425 Msa0166950:intron 45.0%
CCTATAACCCTAGGTGTGAA+AGG + chr1_4:48573417-48573436 None:intergenic 45.0%
CCTTTCACACCTAGGGTTAT+AGG - chr1_4:48573414-48573433 Msa0166950:intron 45.0%
GCGTTAACTGTGGAGTCTTT+GGG + chr1_4:48573720-48573739 None:intergenic 45.0%
AGCGTTAACTGTGGAGTCTT+TGG + chr1_4:48573721-48573740 None:intergenic 45.0%
AATTGGGTTTACTGGGATGG+GGG - chr1_4:48573773-48573792 Msa0166950:intron 45.0%
GGGGATTCTCTTGCTCATTT+AGG - chr1_4:48573792-48573811 Msa0166950:intron 45.0%
! TGCTCTGGTAATGTTTCGAC+AGG - chr1_4:48573918-48573937 Msa0166950:CDS 45.0%
GATCCCATCGTTGCAATATC+TGG - chr1_4:48573949-48573968 Msa0166950:CDS 45.0%
CGACCAGATATTGCAACGAT+GGG + chr1_4:48573955-48573974 None:intergenic 45.0%
ACGACCAGATATTGCAACGA+TGG + chr1_4:48573956-48573975 None:intergenic 45.0%
TCGTGACCTGATTCCTGTTA+TGG - chr1_4:48573972-48573991 Msa0166950:CDS 45.0%
TCGTGCTTTCAGTTTCGCAA+TGG - chr1_4:48574075-48574094 Msa0166950:intron 45.0%
AGGGGATGAGAGAGTAAAAG+AGG + chr1_4:48574213-48574232 None:intergenic 45.0%
! CCATTGATTATGGAGAGGAG+AGG + chr1_4:48574233-48574252 None:intergenic 45.0%
CCTCTCCTCTCCATAATCAA+TGG - chr1_4:48574230-48574249 Msa0166950:intron 45.0%
TGTCAGACAGCCTATCAACT+AGG + chr1_4:48574267-48574286 None:intergenic 45.0%
CTGTGAACGATGGATAGAAG+TGG + chr1_4:48574324-48574343 None:intergenic 45.0%
CACTTCTATCCATCGTTCAC+AGG - chr1_4:48574322-48574341 Msa0166950:CDS 45.0%
! GAGTCTTGGCAGAGTCTTTT+TGG - chr1_4:48574385-48574404 Msa0166950:CDS 45.0%
! ACTAGTGTCCTTATGGGCTA+TGG + chr1_4:48574491-48574510 None:intergenic 45.0%
GCCCATAAGGACACTAGTTA+AGG - chr1_4:48574493-48574512 Msa0166950:CDS 45.0%
!! ATTTCTGGCCAAGAATTCGG+GGG - chr1_4:48574658-48574677 Msa0166950:CDS 45.0%
GCCAAAAATCCTAAGAAGCC+CGG + chr1_4:48574811-48574830 None:intergenic 45.0%
TCTCTACTTGTAGCTACCAG+GGG + chr1_4:48574852-48574871 None:intergenic 45.0%
CTCTCTACTTGTAGCTACCA+GGG + chr1_4:48574853-48574872 None:intergenic 45.0%
!! AGCTACAAGTAGAGAGCATC+AGG - chr1_4:48574857-48574876 Msa0166950:CDS 45.0%
!! GCTACAAGTAGAGAGCATCA+GGG - chr1_4:48574858-48574877 Msa0166950:CDS 45.0%
GACACGGCATACTAAGAGAA+TGG - chr1_4:48575247-48575266 Msa0166950:five_prime_UTR 45.0%
! GTGGCAGCCTTGTATAATGT+AGG - chr1_4:48575592-48575611 Msa0166950:intron 45.0%
CCAAAAAGAGCCAAGAACCA+TGG + chr1_4:48575782-48575801 None:intergenic 45.0%
!! CCATGGTTCTTGGCTCTTTT+TGG - chr1_4:48575779-48575798 Msa0166950:five_prime_UTR 45.0%
!! CAAAAAATAAAATAAAAAAT+TGG + chr1_4:48566060-48566079 None:intergenic 5.0%
CATTCTCAGATTCCGTCGGT+TGG + chr1_4:48566686-48566705 None:intergenic 50.0%
TGTTAGCCATGCAGAGTGTG+GGG - chr1_4:48566704-48566723 Msa0166950:intron 50.0%
TGTGGGGAACTGACATCTAC+TGG - chr1_4:48566720-48566739 Msa0166950:CDS 50.0%
GATACCGTGAGTGATGAAGC+TGG - chr1_4:48566765-48566784 Msa0166950:CDS 50.0%
CGGGATTTCCATCACAACAC+GGG + chr1_4:48566868-48566887 None:intergenic 50.0%
CGGTTGAACTAGCATGCTTC+GGG + chr1_4:48566887-48566906 None:intergenic 50.0%
CCGGTTGAACTAGCATGCTT+CGG + chr1_4:48566888-48566907 None:intergenic 50.0%
CCGAAGCATGCTAGTTCAAC+CGG - chr1_4:48566885-48566904 Msa0166950:intron 50.0%
CGGTATAGCCAGTAGGTGTT+TGG + chr1_4:48566965-48566984 None:intergenic 50.0%
! ACACCTACTGGCTATACCGA+TGG - chr1_4:48566966-48566985 Msa0166950:intron 50.0%
ATAGTCACTGCCACTGCCAT+CGG + chr1_4:48566985-48567004 None:intergenic 50.0%
TGCAGCTCCATCAAGGATAC+CGG + chr1_4:48567237-48567256 None:intergenic 50.0%
!! GGTGATGGTGGATATCTGTG+TGG - chr1_4:48567385-48567404 Msa0166950:intron 50.0%
! GGCTGGTTCATCTATCAACG+AGG - chr1_4:48567672-48567691 Msa0166950:intron 50.0%
TATCAACGAGGGATCCTTCC+AGG - chr1_4:48567684-48567703 Msa0166950:intron 50.0%
GGATCCTTCCAGGTTTGGAA+AGG - chr1_4:48567694-48567713 Msa0166950:intron 50.0%
GTCACCTTTCCAAACCTGGA+AGG + chr1_4:48567701-48567720 None:intergenic 50.0%
AGGAAGGATCAGACCCACTA+TGG + chr1_4:48568057-48568076 None:intergenic 50.0%
! TAGTGGGTCTGATCCTTCCT+TGG - chr1_4:48568057-48568076 Msa0166950:intron 50.0%
ATTGCACAGCATCCACGGAT+GGG - chr1_4:48568470-48568489 Msa0166950:CDS 50.0%
GGGTCCAAACTGAATTTGGG+TGG + chr1_4:48568840-48568859 None:intergenic 50.0%
! AAGGCACATGATGGAGGTGT+AGG + chr1_4:48569564-48569583 None:intergenic 50.0%
! ACTGCAAAGGCACATGATGG+AGG + chr1_4:48569570-48569589 None:intergenic 50.0%
!! AGTGAGCTTTAGCTTGGTGG+GGG - chr1_4:48569663-48569682 Msa0166950:intron 50.0%
TGACGTGAGCGGATAGAAGA+TGG + chr1_4:48569897-48569916 None:intergenic 50.0%
CATATGGAGTGTGACGTGAG+CGG + chr1_4:48569908-48569927 None:intergenic 50.0%
CACGCCTAGGATTGGACATA+TGG + chr1_4:48569924-48569943 None:intergenic 50.0%
TATGTCCAATCCTAGGCGTG+AGG - chr1_4:48569924-48569943 Msa0166950:intron 50.0%
ATGTCCAATCCTAGGCGTGA+GGG - chr1_4:48569925-48569944 Msa0166950:intron 50.0%
CCTCACAAAAGCGGCTTGTA+AGG + chr1_4:48570022-48570041 None:intergenic 50.0%
!!! CCTTACAAGCCGCTTTTGTG+AGG - chr1_4:48570019-48570038 Msa0166950:intron 50.0%
!! ACCCTTACAAAACCGGCTTG+TGG - chr1_4:48570369-48570388 Msa0166950:intron 50.0%
TCGCACACGCGAAGATGATA+AGG + chr1_4:48570677-48570696 None:intergenic 50.0%
TGAACCAGACAGCTGATGAG+TGG - chr1_4:48570722-48570741 Msa0166950:intron 50.0%
GTTTCCACTCATCAGCTGTC+TGG + chr1_4:48570729-48570748 None:intergenic 50.0%
GGGCAGTCTGCATATGTAGA+AGG - chr1_4:48570823-48570842 Msa0166950:intron 50.0%
GGTGCTTGGTCTGCAGAAAA+AGG + chr1_4:48570901-48570920 None:intergenic 50.0%
CCATCAGCACTTCTCTTCTG+CGG + chr1_4:48570945-48570964 None:intergenic 50.0%
TCAGGGACAACGATTTGCAC+AGG - chr1_4:48571112-48571131 Msa0166950:intron 50.0%
ATGCCTAATGGCCTACCAGA+TGG - chr1_4:48571144-48571163 Msa0166950:intron 50.0%
CATGGGCTTCAAACTGCGAA+GGG + chr1_4:48571452-48571471 None:intergenic 50.0%
! GTTTGAAGCCCATGCTGGAA+TGG - chr1_4:48571458-48571477 Msa0166950:intron 50.0%
AACTACTCACGGTTGACGTC+TGG + chr1_4:48571487-48571506 None:intergenic 50.0%
CGTCACTATCTCCCGTAGTA+AGG + chr1_4:48571648-48571667 None:intergenic 50.0%
TGTGCAGTATGTGGAGATGG+AGG - chr1_4:48571673-48571692 Msa0166950:intron 50.0%
! TGTCCTAGGGCTTTTCATGC+AGG - chr1_4:48571718-48571737 Msa0166950:intron 50.0%
TCACCTGCATGAAAAGCCCT+AGG + chr1_4:48571724-48571743 None:intergenic 50.0%
ACAGTGTACCAGAGAGTGGT+TGG - chr1_4:48572087-48572106 Msa0166950:intron 50.0%
AGACAATGCCAACCACTCTC+TGG + chr1_4:48572098-48572117 None:intergenic 50.0%
GTGCGAGGCCAATCATGATA+CGG - chr1_4:48572150-48572169 Msa0166950:intron 50.0%
TGGATGCGTTGTTTGCAGGT+AGG - chr1_4:48572211-48572230 Msa0166950:intron 50.0%
TTGGTTGCTTGCGGGACATT+GGG - chr1_4:48572787-48572806 Msa0166950:intron 50.0%
GGACATTGGGCTATGTGAGT+TGG - chr1_4:48572800-48572819 Msa0166950:intron 50.0%
AGGAGCTTCCCAAGGATAAG+TGG - chr1_4:48572910-48572929 Msa0166950:intron 50.0%
CTGCAGAACTCAGTTTCTGC+TGG - chr1_4:48572969-48572988 Msa0166950:intron 50.0%
! ATCAGGAAGCATGAGGACAG+GGG - chr1_4:48573029-48573048 Msa0166950:intron 50.0%
GCAGCAGCTCGTGAAAGTAA+CGG + chr1_4:48573131-48573150 None:intergenic 50.0%
ACCAACATTGTCCATGCTCC+AGG + chr1_4:48573440-48573459 None:intergenic 50.0%
ACACCCCCTTGCACAAAATG+AGG - chr1_4:48573608-48573627 Msa0166950:intron 50.0%
CACCCCCTTGCACAAAATGA+GGG - chr1_4:48573609-48573628 Msa0166950:intron 50.0%
! ACGGCCCTCATTTTGTGCAA+GGG + chr1_4:48573616-48573635 None:intergenic 50.0%
! AACGGCCCTCATTTTGTGCA+AGG + chr1_4:48573617-48573636 None:intergenic 50.0%
TGCCTTCATTGGGTGTAAGG+GGG + chr1_4:48573696-48573715 None:intergenic 50.0%
CTGCCTTCATTGGGTGTAAG+GGG + chr1_4:48573697-48573716 None:intergenic 50.0%
GCTGCCTTCATTGGGTGTAA+GGG + chr1_4:48573698-48573717 None:intergenic 50.0%
GTCTTTGGGCTGCCTTCATT+GGG + chr1_4:48573706-48573725 None:intergenic 50.0%
AGTCTTTGGGCTGCCTTCAT+TGG + chr1_4:48573707-48573726 None:intergenic 50.0%
TGGCAAAGCAGCGTTAACTG+TGG + chr1_4:48573730-48573749 None:intergenic 50.0%
GAGTAGTGCCATAGCCCATA+AGG - chr1_4:48574480-48574499 Msa0166950:CDS 50.0%
TAGTATCTGCCGGGCTTCTT+AGG - chr1_4:48574799-48574818 Msa0166950:CDS 50.0%
! GCCGGGCTTCTTAGGATTTT+TGG - chr1_4:48574807-48574826 Msa0166950:CDS 50.0%
GGGGAAGCTCAGCAATATTG+CGG + chr1_4:48574833-48574852 None:intergenic 50.0%
CAATATTGCTGAGCTTCCCC+TGG - chr1_4:48574833-48574852 Msa0166950:CDS 50.0%
GCTCTCTACTTGTAGCTACC+AGG + chr1_4:48574854-48574873 None:intergenic 50.0%
CGCTGTTCTCTTGCATAGAG+AGG - chr1_4:48575050-48575069 Msa0166950:CDS 50.0%
! AGTGCTGGAAAAGATGGTGC+AGG - chr1_4:48575416-48575435 Msa0166950:intron 50.0%
ATGGGGAACGTGGCCTAAAT+TGG - chr1_4:48575636-48575655 Msa0166950:five_prime_UTR 50.0%
! GTGCGGGAATGAAGTGTTCG+TGG + chr1_4:48565838-48565857 None:intergenic 55.0%
TCAGTTCCCCACACTCTGCA+TGG + chr1_4:48566713-48566732 None:intergenic 55.0%
TGCAGTGTCCCGTGTTGTGA+TGG - chr1_4:48566857-48566876 Msa0166950:intron 55.0%
CTGCCATCGGTATAGCCAGT+AGG + chr1_4:48566972-48566991 None:intergenic 55.0%
ACTGGCTATACCGATGGCAG+TGG - chr1_4:48566972-48566991 Msa0166950:intron 55.0%
GATGGCAGTGGCAGTGACTA+TGG - chr1_4:48566984-48567003 Msa0166950:intron 55.0%
!! GGGTTGGTAGAGAGCTCGTA+TGG - chr1_4:48567095-48567114 Msa0166950:intron 55.0%
TGGTAGAGAGCTCGTATGGC+AGG - chr1_4:48567099-48567118 Msa0166950:intron 55.0%
GGTAGAGAGCTCGTATGGCA+GGG - chr1_4:48567100-48567119 Msa0166950:intron 55.0%
GTAGAGAGCTCGTATGGCAG+GGG - chr1_4:48567101-48567120 Msa0166950:intron 55.0%
!! CTCATCTGGCGTGCTGTTTG+TGG + chr1_4:48567638-48567657 None:intergenic 55.0%
CACAAACAGCACGCCAGATG+AGG - chr1_4:48567636-48567655 Msa0166950:CDS 55.0%
ACGAGGGATCCTTCCAGGTT+TGG - chr1_4:48567689-48567708 Msa0166950:intron 55.0%
CATTGCACAGCATCCACGGA+TGG - chr1_4:48568469-48568488 Msa0166950:CDS 55.0%
TGCACTGTGCACCAAAGCCA+GGG + chr1_4:48569259-48569278 None:intergenic 55.0%
TGTCCAATCCTAGGCGTGAG+GGG - chr1_4:48569926-48569945 Msa0166950:intron 55.0%
!! CCGCAGAAGAGAAGTGCTGA+TGG - chr1_4:48570942-48570961 Msa0166950:intron 55.0%
GCACCATCTGGTAGGCCATT+AGG + chr1_4:48571150-48571169 None:intergenic 55.0%
TAAGCCAACTCGGCACCATC+TGG + chr1_4:48571162-48571181 None:intergenic 55.0%
GCATGGGCTTCAAACTGCGA+AGG + chr1_4:48571453-48571472 None:intergenic 55.0%
! TCGCAGTTTGAAGCCCATGC+TGG - chr1_4:48571453-48571472 Msa0166950:intron 55.0%
TGAAGCCCATGCTGGAATGG+CGG - chr1_4:48571461-48571480 Msa0166950:intron 55.0%
CCTCGCACCTCTTTCATCAC+CGG + chr1_4:48572138-48572157 None:intergenic 55.0%
TGGGTGGATGCGTTGTTTGC+AGG - chr1_4:48572207-48572226 Msa0166950:intron 55.0%
GTTGGTTGCTTGCGGGACAT+TGG - chr1_4:48572786-48572805 Msa0166950:intron 55.0%
CACACCTAGGGTTATAGGCC+TGG - chr1_4:48573419-48573438 Msa0166950:intron 55.0%
TGCTCCAGGCCTATAACCCT+AGG + chr1_4:48573426-48573445 None:intergenic 55.0%
AGGGTTATAGGCCTGGAGCA+TGG - chr1_4:48573426-48573445 Msa0166950:intron 55.0%
GCCTGGAGCATGGACAATGT+TGG - chr1_4:48573436-48573455 Msa0166950:intron 55.0%
! GGCCCTCATTTTGTGCAAGG+GGG + chr1_4:48573614-48573633 None:intergenic 55.0%
! CGGCCCTCATTTTGTGCAAG+GGG + chr1_4:48573615-48573634 None:intergenic 55.0%
CACCCCCTTACACCCAATGA+AGG - chr1_4:48573691-48573710 Msa0166950:intron 55.0%
GGCTGCCTTCATTGGGTGTA+AGG + chr1_4:48573699-48573718 None:intergenic 55.0%
CAGGGGATGCAGAGTCCATT+TGG - chr1_4:48575116-48575135 Msa0166950:CDS 55.0%
CACAGCATCCACGGATGGGA+AGG - chr1_4:48568474-48568493 Msa0166950:CDS 60.0%
GTGCACTGTGCACCAAAGCC+AGG + chr1_4:48569260-48569279 None:intergenic 60.0%
GAAGATGGCCCGACGGATCT+TGG + chr1_4:48569882-48569901 None:intergenic 60.0%
GCGGATAGAAGATGGCCCGA+CGG + chr1_4:48569889-48569908 None:intergenic 60.0%
AAGCCCCTCACGCCTAGGAT+TGG + chr1_4:48569932-48569951 None:intergenic 60.0%
AACACAAGCCCCTCACGCCT+AGG + chr1_4:48569937-48569956 None:intergenic 60.0%
CCAACTCGGCACCATCTGGT+AGG + chr1_4:48571158-48571177 None:intergenic 60.0%
! CCTACCAGATGGTGCCGAGT+TGG - chr1_4:48571155-48571174 Msa0166950:intron 60.0%
TCTGGCCGCCATTCCAGCAT+GGG + chr1_4:48571469-48571488 None:intergenic 60.0%
! CCGGTGATGAAAGAGGTGCG+AGG - chr1_4:48572135-48572154 Msa0166950:intron 60.0%
ACTCTGCATCCCCTGCAGCA+GGG + chr1_4:48575111-48575130 None:intergenic 60.0%
GTCTGGCCGCCATTCCAGCA+TGG + chr1_4:48571470-48571489 None:intergenic 65.0%
AAGCTGGTGCTCCCTGCTGC+AGG - chr1_4:48575097-48575116 Msa0166950:CDS 65.0%
AGCTGGTGCTCCCTGCTGCA+GGG - chr1_4:48575098-48575117 Msa0166950:CDS 65.0%
GACTCTGCATCCCCTGCAGC+AGG + chr1_4:48575112-48575131 None:intergenic 65.0%
GCTGGTGCTCCCTGCTGCAG+GGG - chr1_4:48575099-48575118 Msa0166950:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 48565722 48575878 48565722 ID=Msa0166950;Name=Msa0166950
chr1_4 mRNA 48565722 48575878 48565722 ID=Msa0166950-mRNA-1;Parent=Msa0166950;Name=Msa0166950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=425|0.87|0.88|1|0.93|0.88|17|429|792
chr1_4 exon 48565722 48566234 48565722 ID=Msa0166950-mRNA-1:exon:14157;Parent=Msa0166950-mRNA-1
chr1_4 exon 48566423 48566563 48566423 ID=Msa0166950-mRNA-1:exon:14156;Parent=Msa0166950-mRNA-1
chr1_4 exon 48566716 48566809 48566716 ID=Msa0166950-mRNA-1:exon:14155;Parent=Msa0166950-mRNA-1
chr1_4 exon 48566893 48566949 48566893 ID=Msa0166950-mRNA-1:exon:14154;Parent=Msa0166950-mRNA-1
chr1_4 exon 48567599 48567660 48567599 ID=Msa0166950-mRNA-1:exon:14153;Parent=Msa0166950-mRNA-1
chr1_4 exon 48568440 48568688 48568440 ID=Msa0166950-mRNA-1:exon:14152;Parent=Msa0166950-mRNA-1
chr1_4 exon 48569395 48569528 48569395 ID=Msa0166950-mRNA-1:exon:14151;Parent=Msa0166950-mRNA-1
chr1_4 exon 48570111 48570156 48570111 ID=Msa0166950-mRNA-1:exon:14150;Parent=Msa0166950-mRNA-1
chr1_4 exon 48570249 48570308 48570249 ID=Msa0166950-mRNA-1:exon:14149;Parent=Msa0166950-mRNA-1
chr1_4 exon 48570403 48570484 48570403 ID=Msa0166950-mRNA-1:exon:14148;Parent=Msa0166950-mRNA-1
chr1_4 exon 48570621 48570689 48570621 ID=Msa0166950-mRNA-1:exon:14147;Parent=Msa0166950-mRNA-1
chr1_4 exon 48570839 48570949 48570839 ID=Msa0166950-mRNA-1:exon:14146;Parent=Msa0166950-mRNA-1
chr1_4 exon 48572840 48572924 48572840 ID=Msa0166950-mRNA-1:exon:14145;Parent=Msa0166950-mRNA-1
chr1_4 exon 48573885 48574083 48573885 ID=Msa0166950-mRNA-1:exon:14144;Parent=Msa0166950-mRNA-1
chr1_4 exon 48574168 48574236 48574168 ID=Msa0166950-mRNA-1:exon:14143;Parent=Msa0166950-mRNA-1
chr1_4 exon 48574317 48575301 48574317 ID=Msa0166950-mRNA-1:exon:14142;Parent=Msa0166950-mRNA-1
chr1_4 exon 48575602 48575878 48575602 ID=Msa0166950-mRNA-1:exon:14141;Parent=Msa0166950-mRNA-1
chr1_4 five_prime_UTR 48575602 48575878 48575602 ID=Msa0166950-mRNA-1:five_prime_utr;Parent=Msa0166950-mRNA-1
chr1_4 five_prime_UTR 48575154 48575301 48575154 ID=Msa0166950-mRNA-1:five_prime_utr;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48574317 48575153 48574317 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48574168 48574236 48574168 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48573885 48574083 48573885 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48572840 48572924 48572840 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48570839 48570949 48570839 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48570621 48570689 48570621 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48570403 48570484 48570403 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48570249 48570308 48570249 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48570111 48570156 48570111 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48569395 48569528 48569395 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48568440 48568688 48568440 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48567599 48567660 48567599 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48566893 48566949 48566893 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48566716 48566809 48566716 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48566423 48566563 48566423 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 CDS 48566151 48566234 48566151 ID=Msa0166950-mRNA-1:cds;Parent=Msa0166950-mRNA-1
chr1_4 three_prime_UTR 48565722 48566150 48565722 ID=Msa0166950-mRNA-1:three_prime_utr;Parent=Msa0166950-mRNA-1
Gene Sequence

>Msa0166950

ATGGGAGAAGAAGCAGTTTGTGTGCAAGAATTGGTTGATGGAAAGACGGAAAATACCGAGGAATCAAGGTTGGAATTGAAACGTGATTATAACCAATGTGTTGCTGATACTGAAACAAATGTTCCGCCAAATAAAAAACAAGCTAAAGAAGTATCAAATGATGAATTGCGTTCGGAAGTTACAAATCCAAATGTTTCTGCAACAGAACATGCACAAACCTTTCATGATATCAGTAGCCAACCGACGGAATCTGAGAATGTTAGCCATGCAGAGTGTGGGGAACTGACATCTACTGGTTTGGAGAATTCCAGTTCTCATGATACCGTGAGTGATGAAGCTGGTGTTCGGAATAATGATAATGATAATATTAATAATTTGTGTCAGAATGATAAAGGTACGAGTAGTAACGATGCAGTGTCCCGTGTTGTGATGGAAATCCCGAAGCATGCTAGTTCAACCGGTATTCGAAAGATTACTTTTAAGTTCAGTAAAAAGAAGGAGGATTATGATGATTACCAAACACCTACTGGCTATACCGATGGCAGTGGCAGTGACTATGGATATAGCTATGGGAATGGCAGTGGATATGGCTATGGATATGGTTATCACGGGGATGATGAATATTTGGCAAATGATGATTATAATAGTGGGTTGGTAGAGAGCTCGTATGGCAGGGGATATGTTCCTTATGAAGATTCGGAGTTGTATTCTGGCAATATGGAATTGAAAATGTCAAAGAAAGTAGTTCCAAACGCCTTCCCCAATAATGTGAAAAAACTATTATCAACCGGTATCCTTGATGGAGCTGCAGTGAAATATATTTATAACCCTGGAAAGGTTGAGCTCGATGGGATTATTGGTGATGGTGGATATCTGTGTGGCTGTTCAATGTGCAGTTACTCTAGAGTGCTCAGTGCCTATGAGTTTGAGCAGCATGCTGGTGCTAAGACTAGACATCCAAATAATCACATATTCCTAGAAAATGGAAAACCAATTTATAGCATTATACATGAAATAAAAACTGCCACAAACAGCACGCCAGATGAGGTTATAAAGAATGTGGCTGGTTCATCTATCAACGAGGGATCCTTCCAGGTTTGGAAAGAAAGTCTCCTACAAAGCAGCAAGAAGGTTCCAACTCAAAAAAAATACAGCACAAAGTATACTGGCATGCCTCATACATACAACAGTCAATCTATGGAAAGTGCGAGCTCCTTATCATCTTCGCGTGTGCGAAATCATTTTGAGCAGCAAATGTATGTGAACCAGACAGCTGATGAGTGGAAACGAGTCGTAAAGAAACCAAGCACCTACACTTACTACTCAGGTATACCGCAGAAGAGAAGTGCTGATGGTTGCACTAAGAAAAGGGACAACGATTTGCACAGGTTACTTTTTATGCCTAATGGCCTACCAGATGGTGCCGAGTTGGCTTACTATGTCAAAGGACAGAAATTACTTGGAGGTTACAAACAAGGAAATGGTATAGTCTGTGGTTGTTGTGATATAGAGATAAGCCCTTCGCAGTTTGAAGCCCATGCTGGAATGGCGGCCAGACCCTGCTTAGGTTTACACAGTGTACCAGAGAGTGGTTGGCATTGTCTAAATTGTGAAGATAATACCGGTGATGAAAGAGGTGCGAGGCCAATCATGATACGGTTGACACGGGTTGATAAAGAACCAGAATATGAAGAGCTTCCCAAGGATAAGTGGTTTTGTTGCGACGACTGCAATCGAATATATGTGGCTCTGCAGAACTCAGTTTCTGCTGGAGCAGATACCATACCATCTTCCTTGTCGGAACTAATAATCAGGAAGCATGAGGACAGGGGATTATGTACGTATGGAGACATGAATGATATCCAATGGAGAATTTTAAGTGGCAAAAGTCGTTATGCAGAGCATTTACCGTTACTTTCACGAGCTGCTGCAATTTTTCGAGAGTGCTTTGATCCCATCGTTGCAATATCTGGTCGTGACCTGATTCCTGTTATGGTATATGGGCGAAATATTTCTGGCCAAGAATTCGGGGGAATGTATTGCATCGTTTTAATTGTGAATTCTATTGTAGTATCTGCCGGGCTTCTTAGGATTTTTGGCCGCAATATTGCTGAGCTTCCCCTGGTAGCTACAAGTAGAGAGCATCAGGGAAAAGGTTATTTTCAAGCGCTGTTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTAAATGTAGAAAAGCTGGTGCTCCCTGCTGCAGGGGATGCAGAGTCCATTTGGACTAAGAAATTAGGCTTTCACAAGATGAGTGAAGATCAGTTAACCAAACATCTTAAAGAGGTGCAGCTCACCCTCTTCAACAAAACATCAGTGCTGGAAAAGATGGTGCAGGCGACAGAATGA
Protein sequence

>Msa0166950

MGEEAVCVQELVDGKTENTEESRLELKRDYNQCVADTETNVPPNKKQAKEVSNDELRSEVTNPNVSATEHAQTFHDISSQPTESENVSHAECGELTSTGLENSSSHDTVSDEAGVRNNDNDNINNLCQNDKGTSSNDAVSRVVMEIPKHASSTGIRKITFKFSKKKEDYDDYQTPTGYTDGSGSDYGYSYGNGSGYGYGYGYHGDDEYLANDDYNSGLVESSYGRGYVPYEDSELYSGNMELKMSKKVVPNAFPNNVKKLLSTGILDGAAVKYIYNPGKVELDGIIGDGGYLCGCSMCSYSRVLSAYEFEQHAGAKTRHPNNHIFLENGKPIYSIIHEIKTATNSTPDEVIKNVAGSSINEGSFQVWKESLLQSSKKVPTQKKYSTKYTGMPHTYNSQSMESASSLSSSRVRNHFEQQMYVNQTADEWKRVVKKPSTYTYYSGIPQKRSADGCTKKRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDIEISPSQFEAHAGMAARPCLGLHSVPESGWHCLNCEDNTGDERGARPIMIRLTRVDKEPEYEELPKDKWFCCDDCNRIYVALQNSVSAGADTIPSSLSELIIRKHEDRGLCTYGDMNDIQWRILSGKSRYAEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSIVVSAGLLRIFGRNIAELPLVATSREHQGKGYFQALFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFHKMSEDQLTKHLKEVQLTLFNKTSVLEKMVQATE*