AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1300860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300860 MtrunA17_Chr4g0063941 90.782 358 29 1 1 358 1 354 0.0 599
Msa1300860 MtrunA17_Chr4g0063971 91.061 358 15 2 1 358 1 341 0.0 563
Msa1300860 MtrunA17_Chr6g0476191 70.400 125 36 1 1 125 1 124 2.25e-56 181
Msa1300860 MtrunA17_Chr6g0476221 69.600 125 37 1 1 125 1 124 3.87e-55 178
Msa1300860 MtrunA17_Chr6g0476211 63.830 141 47 2 1 138 1 140 3.18e-54 175
Msa1300860 MtrunA17_Chr4g0003291 65.476 84 27 2 37 119 2 84 1.23e-29 117
Msa1300860 MtrunA17_Chr6g0474121 55.405 74 29 1 67 136 1 74 1.46e-17 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300860 AT1G15340.1 58.879 107 41 3 21 126 5 109 3.22e-35 132
Msa1300860 AT3G15790.1 58.929 112 42 3 18 127 2 111 2.32e-34 127
Msa1300860 AT3G15790.3 58.929 112 42 3 18 127 2 111 2.32e-34 127
Msa1300860 AT3G15790.2 58.929 112 42 3 18 127 2 111 2.32e-34 127
Msa1300860 AT1G15340.2 60.784 51 20 0 22 72 6 56 1.67e-17 82.8

Find 117 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTCTGCTACGTTTCTT+AGG 0.205617 8_3:-62596930 None:intergenic
ATTGGAGTAAACACATATTT+AGG 0.215489 8_3:-62597976 None:intergenic
ACAATTCTCGATGATCTTCT+TGG 0.243354 8_3:-62596861 None:intergenic
GACGACTTGCAGTGAGTTAA+AGG 0.258821 8_3:+62598035 Msa1300860:three_prime_UTR
AGAGTTTATTGTATTCATTC+AGG 0.264815 8_3:-62597689 None:intergenic
ATAGGTTCATATCATATTAC+AGG 0.305966 8_3:-62597934 None:intergenic
TACCAAACACATACTTGAAT+TGG 0.310689 8_3:-62597994 None:intergenic
CAATCAAATTCCGATATGTT+TGG 0.322423 8_3:-62596822 None:intergenic
ATACTTCTCCAGATGCCTTT+TGG 0.335850 8_3:-62596781 None:intergenic
TCCATCTGGTTGGACCAAAA+AGG 0.337926 8_3:+62594518 Msa1300860:CDS
CGGAATTTGATTGGGGCACT+GGG 0.341266 8_3:+62596832 Msa1300860:CDS
CTCCAATTCAAGTATGTGTT+TGG 0.351734 8_3:+62597992 Msa1300860:three_prime_UTR
TCCTGCTTTGTATCCTCTGC+TGG 0.352023 8_3:-62597353 None:intergenic
ACGAAGCAAGATGGTGGATC+TGG 0.352435 8_3:+62597443 Msa1300860:CDS
TCAAGGTCTCACATGATTAT+AGG 0.357262 8_3:-62597952 None:intergenic
TCTTGCTTTGTCTCCTCTGC+TGG 0.359438 8_3:-62597314 None:intergenic
CAAACATATCGGAATTTGAT+TGG 0.360294 8_3:+62596823 Msa1300860:CDS
GTCTGGAGTTGTTCAGAATA+AGG 0.361170 8_3:+62597232 Msa1300860:CDS
TCGGAATTTGATTGGGGCAC+TGG 0.370091 8_3:+62596831 Msa1300860:CDS
GGTGCTGTCGGTGCAGCTGC+AGG 0.374683 8_3:+62594459 Msa1300860:CDS
TCCAACGAAACAGGCTCTTC+TGG 0.378309 8_3:-62594486 None:intergenic
ACTTTCTGCTACGTTTCTTA+GGG 0.378522 8_3:-62596929 None:intergenic
TCTTGCTTTGTCTCCTCTGC+TGG 0.384252 8_3:-62597275 None:intergenic
GACAGGATCACCCGCGAGGC+TGG 0.387354 8_3:+62597542 Msa1300860:CDS
AATCAAATTCCGATATGTTT+GGG 0.391168 8_3:-62596821 None:intergenic
AAACATATCGGAATTTGATT+GGG 0.399027 8_3:+62596824 Msa1300860:CDS
ATGTCTCTTCACAACATAGA+TGG 0.401913 8_3:-62597872 None:intergenic
TCTTGTTTCGTCTCCTCCAC+TGG 0.409874 8_3:-62597392 None:intergenic
TCAGTTGAGAAGGAAGGTTC+TGG 0.420268 8_3:+62594438 Msa1300860:CDS
TCTTGTCGCGTCTTTCTCCT+TGG 0.423678 8_3:-62597573 None:intergenic
AATAAGGATGTAGAAAAGAT+TGG 0.432064 8_3:+62597248 Msa1300860:CDS
GACAAAGGAGCTGAGGGGTC+TGG 0.432101 8_3:+62597215 Msa1300860:CDS
ATTGTGTTCACTTCACCAAC+AGG 0.434194 8_3:+62596744 Msa1300860:CDS
GCAGGTAGCTCCAACGAAAC+AGG 0.435285 8_3:-62594495 None:intergenic
CGAAGCAAGATGGTGGATCT+GGG 0.446842 8_3:+62597444 Msa1300860:CDS
TTGGAGCTACCTGCTCCATC+TGG 0.447780 8_3:+62594504 Msa1300860:CDS
TCTTGCTTCGTCTCCTCCAC+TGG 0.448961 8_3:-62597431 None:intergenic
ACAAAGCAAGAAGAAAAGAT+TGG 0.458501 8_3:+62597287 Msa1300860:CDS
ACAAAGCAAGAAGAAAAGAT+TGG 0.458501 8_3:+62597326 Msa1300860:CDS
TAACGGTGGCCCAAACATAT+CGG 0.461224 8_3:+62596812 Msa1300860:CDS
GATCCGTACCAAAAGGCATC+TGG 0.466902 8_3:+62596773 Msa1300860:CDS
GCAAGAAGCTGGTGAAACTA+AGG 0.470297 8_3:+62597013 Msa1300860:CDS
GGTTTCACCTCCAGCCTCGC+GGG 0.474470 8_3:-62597552 None:intergenic
TCTTACAACACAATGTTACA+TGG 0.474654 8_3:-62597909 None:intergenic
TAACGAAAATGAAGATAAGA+AGG 0.479634 8_3:+62597070 Msa1300860:CDS
GAATCAGAGGTGACTGTGAA+TGG 0.479774 8_3:+62597641 Msa1300860:CDS
CAAGTCTCCATCAGCAGTGT+TGG 0.480380 8_3:-62597168 None:intergenic
GCAATATAAGTAGTTTCTCC+AGG 0.485009 8_3:-62597128 None:intergenic
GGGAAATCCAACACTGCTGA+TGG 0.499797 8_3:+62597161 Msa1300860:CDS
GAATGAATACAATAAACTCT+TGG 0.502486 8_3:+62597692 Msa1300860:three_prime_UTR
TGCTGAGAAAACGGCTGAAG+TGG 0.506220 8_3:+62597496 Msa1300860:CDS
TAAACACATATTTAGGATCA+AGG 0.511551 8_3:-62597969 None:intergenic
AGCTACCTGCTCCATCTGGT+TGG 0.512073 8_3:+62594508 Msa1300860:CDS
CAAGGATTTAGAGCCGGAAA+AGG 0.515807 8_3:+62597040 Msa1300860:CDS
TACTTATATTGCAAAGGATG+AGG 0.518178 8_3:+62597139 Msa1300860:CDS
GCCAGCAGAGGATACAAAGC+AGG 0.518269 8_3:+62597352 Msa1300860:CDS
TTATCCTCAGATAGATCTAA+AGG 0.518792 8_3:-62597732 None:intergenic
TGCCCCTACTGCTGAGAAAA+CGG 0.519959 8_3:+62597487 Msa1300860:CDS
TTGGTCCAACCAGATGGAGC+AGG 0.524315 8_3:-62594513 None:intergenic
GTACGGATCTCGTCTCCTGT+TGG 0.530266 8_3:-62596759 None:intergenic
AAAATAAAGAGGAAGATGAC+AGG 0.537391 8_3:+62597525 Msa1300860:CDS
TGAAGATAAGAAGGGAGCAG+AGG 0.540299 8_3:+62597079 Msa1300860:CDS
ACTTATATTGCAAAGGATGA+GGG 0.544601 8_3:+62597140 Msa1300860:CDS
GACGTGGAAATGCAAGAAGC+TGG 0.545188 8_3:+62597002 Msa1300860:CDS
GAGACGAGATCCGTACCAAA+AGG 0.546382 8_3:+62596766 Msa1300860:CDS
CTTTCTGCTACGTTTCTTAG+GGG 0.561874 8_3:-62596928 None:intergenic
ACCAGAAGAGCCTGTTTCGT+TGG 0.564563 8_3:+62594485 Msa1300860:CDS
AGTAGTTTCTCCAGGTCGAA+TGG 0.564767 8_3:-62597120 None:intergenic
GGATGACAAGGATTTAGAGC+CGG 0.567635 8_3:+62597034 Msa1300860:CDS
GAGAAGTATTTGAAAACTAA+CGG 0.568076 8_3:+62596795 Msa1300860:CDS
AGAAAAGATCAGACAGCCAG+TGG 0.571409 8_3:+62597415 Msa1300860:CDS
TTCAAAGAAAGAAGCTTCTG+AGG 0.575578 8_3:+62596959 Msa1300860:CDS
AGCTTCTGAGGACGAAGCAG+AGG 0.581963 8_3:+62596971 Msa1300860:CDS
TGGTTTCACCTCCAGCCTCG+CGG 0.583893 8_3:-62597553 None:intergenic
ATCATCGAGAATTGTTGAGA+AGG 0.584060 8_3:+62596869 Msa1300860:CDS
AGAAACTACTTATATTGCAA+AGG 0.585396 8_3:+62597133 Msa1300860:CDS
TTTCTGCTACGTTTCTTAGG+GGG 0.591296 8_3:-62596927 None:intergenic
AACATATCGGAATTTGATTG+GGG 0.594084 8_3:+62596825 Msa1300860:CDS
GCGAGTTCAGTTGAGAAGGA+AGG 0.595479 8_3:+62594432 Msa1300860:CDS
ATTGACGACAAAGGAGCTGA+GGG 0.598436 8_3:+62597209 Msa1300860:CDS
AGAAAAGATTGAACAGCCAG+TGG 0.600966 8_3:+62597376 Msa1300860:CDS
GTGGAGGAGACGAAGCAAGA+TGG 0.601635 8_3:+62597434 Msa1300860:CDS
AACGAAAATGAAGATAAGAA+GGG 0.604794 8_3:+62597071 Msa1300860:CDS
GAGGAGACGAAGCAAGATGG+TGG 0.606090 8_3:+62597437 Msa1300860:CDS
CTTATATTGCAAAGGATGAG+GGG 0.609242 8_3:+62597141 Msa1300860:CDS
AAGGAAGGTTCTGGTGCTGT+CGG 0.610581 8_3:+62594447 Msa1300860:CDS
AAAGAGAATATTGACGACAA+AGG 0.610881 8_3:+62597200 Msa1300860:CDS
GAGACTTGGGGCATGAACGT+TGG 0.611539 8_3:-62598122 None:intergenic
GCATGATGAAGCAAACTACA+AGG 0.614302 8_3:+62597598 Msa1300860:CDS
AGTGGATGGCGAAAATAAAG+AGG 0.614877 8_3:+62597514 Msa1300860:CDS
CTCTTCACAACATAGATGGA+TGG 0.614927 8_3:-62597868 None:intergenic
TATGAACAAGGCTGAATCAG+AGG 0.619422 8_3:+62597628 Msa1300860:CDS
GTTAAAGAGTCCATTCGACC+TGG 0.624144 8_3:+62597110 Msa1300860:CDS
AATGGCGAGTTCAGTTGAGA+AGG 0.627741 8_3:+62594428 Msa1300860:exon
TATTGACGACAAAGGAGCTG+AGG 0.627859 8_3:+62597208 Msa1300860:CDS
CAAGGTTCATGATATGAACA+AGG 0.632417 8_3:+62597616 Msa1300860:CDS
GAGAAAACGGCTGAAGTGGA+TGG 0.633447 8_3:+62597500 Msa1300860:CDS
CTTACAACACAATGTTACAT+GGG 0.633740 8_3:-62597908 None:intergenic
TGGTGAAACTAAGGATGACA+AGG 0.634779 8_3:+62597022 Msa1300860:CDS
CGTTGGATAACACAAGGACA+TGG 0.639752 8_3:-62598105 None:intergenic
GAAGCAAGATGGTGGATCTG+GGG 0.642765 8_3:+62597445 Msa1300860:CDS
AAAGATTGAACAGCCAGTGG+AGG 0.643021 8_3:+62597379 Msa1300860:CDS
TAGGTTCATATCATATTACA+GGG 0.645360 8_3:-62597933 None:intergenic
CATGAACGTTGGATAACACA+AGG 0.646921 8_3:-62598111 None:intergenic
AGCAGAGGAGACAAAAGACG+TGG 0.647050 8_3:+62596986 Msa1300860:CDS
AAAGATCAGACAGCCAGTGG+AGG 0.654588 8_3:+62597418 Msa1300860:CDS
GAGAATTGTTGAGAAGGTCA+AGG 0.659236 8_3:+62596875 Msa1300860:CDS
AAAGATTGGACTGCCAGCAG+AGG 0.662242 8_3:+62597262 Msa1300860:CDS
AAAGATTGGACAGCCAGCAG+AGG 0.666945 8_3:+62597340 Msa1300860:CDS
CGAGGCTGGAGGTGAAACCA+AGG 0.671676 8_3:+62597556 Msa1300860:CDS
AAAGATTGGACAGCCAGCAG+AGG 0.672505 8_3:+62597301 Msa1300860:CDS
GACGCCTTTAGATCTATCTG+AGG 0.685118 8_3:+62597728 Msa1300860:three_prime_UTR
GGAATTTGATTGGGGCACTG+GGG 0.689173 8_3:+62596833 Msa1300860:CDS
GAATGGAAGCTGAATTGTTG+AGG 0.691183 8_3:+62597658 Msa1300860:exon
TTGACGACAAAGGAGCTGAG+GGG 0.744956 8_3:+62597210 Msa1300860:CDS
AGATGACAGGATCACCCGCG+AGG 0.746796 8_3:+62597538 Msa1300860:CDS
AAGTATTTGAAAACTAACGG+TGG 0.749054 8_3:+62596798 Msa1300860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTGTAATTTTAAATATT+TGG + chr8_3:62595029-62595048 Msa1300860:intron 10.0%
!!! GTTTTGTAATTTTAAATATT+TGG + chr8_3:62595029-62595048 Msa1300860:intron 10.0%
!! TGATAAATAATTGAAGAAAA+AGG - chr8_3:62594296-62594315 None:intergenic 15.0%
!!! AGTATTGTGATATTTTTTTT+GGG + chr8_3:62594386-62594405 Msa1300860:intron 15.0%
!!! TTGTTTGAATTTTCAATTTT+AGG + chr8_3:62594553-62594572 Msa1300860:intron 15.0%
!!! ATTTTAAATATTTGGTGAAA+TGG + chr8_3:62595037-62595056 Msa1300860:intron 15.0%
!!! TTTTAAATATTTGGTGAAAT+GGG + chr8_3:62595038-62595057 Msa1300860:intron 15.0%
!!! TTTTTTTTACAATGATAGAT+GGG + chr8_3:62595295-62595314 Msa1300860:intron 15.0%
!! TTTACTTCAAGTATTAAAAA+AGG - chr8_3:62595723-62595742 None:intergenic 15.0%
!! TGATAAATAATTGAAGAAAA+AGG - chr8_3:62594296-62594315 None:intergenic 15.0%
!!! AGTATTGTGATATTTTTTTT+GGG + chr8_3:62594386-62594405 Msa1300860:intron 15.0%
!!! TTGTTTGAATTTTCAATTTT+AGG + chr8_3:62594553-62594572 Msa1300860:intron 15.0%
!!! ATTTTAAATATTTGGTGAAA+TGG + chr8_3:62595037-62595056 Msa1300860:intron 15.0%
!!! TTTTAAATATTTGGTGAAAT+GGG + chr8_3:62595038-62595057 Msa1300860:intron 15.0%
!!! TTTTTTTTACAATGATAGAT+GGG + chr8_3:62595295-62595314 Msa1300860:intron 15.0%
!! TTTACTTCAAGTATTAAAAA+AGG - chr8_3:62595723-62595742 None:intergenic 15.0%
!!! CAGTATTGTGATATTTTTTT+TGG + chr8_3:62594385-62594404 Msa1300860:intron 20.0%
!!! AAAAATTAGAACAACCTTTT+TGG - chr8_3:62594535-62594554 None:intergenic 20.0%
!!! TTTATAACATGCTTTGATTT+TGG + chr8_3:62594657-62594676 Msa1300860:intron 20.0%
!!! TGATTTTGGTTTTCATAATT+AGG + chr8_3:62594671-62594690 Msa1300860:intron 20.0%
!!! GATTTTGGTTTTCATAATTA+GGG + chr8_3:62594672-62594691 Msa1300860:intron 20.0%
!! TAAAATTACAAAACCAAAGT+AGG - chr8_3:62595023-62595042 None:intergenic 20.0%
!! CATCTATCATTGTAAAAAAA+AGG - chr8_3:62595296-62595315 None:intergenic 20.0%
!!! CTTTTTTTTACAATGATAGA+TGG + chr8_3:62595294-62595313 Msa1300860:intron 20.0%
!! AAAAATGTAATAGTTAGACT+TGG - chr8_3:62595385-62595404 None:intergenic 20.0%
!! ATAGTTATTACACATTTACA+TGG - chr8_3:62595619-62595638 None:intergenic 20.0%
!! GTCAGGAAATATTATAATAA+TGG - chr8_3:62595668-62595687 None:intergenic 20.0%
!! ATTGTATAATACATAACTAG+AGG + chr8_3:62595912-62595931 Msa1300860:intron 20.0%
!! TTGTATAATACATAACTAGA+GGG + chr8_3:62595913-62595932 Msa1300860:intron 20.0%
!!! TTTTTAATTGAGTATTCTCA+AGG + chr8_3:62596510-62596529 Msa1300860:intron 20.0%
!!! TTTTAATTGAGTATTCTCAA+GGG + chr8_3:62596511-62596530 Msa1300860:intron 20.0%
!!! CAGTATTGTGATATTTTTTT+TGG + chr8_3:62594385-62594404 Msa1300860:intron 20.0%
!!! AAAAATTAGAACAACCTTTT+TGG - chr8_3:62594535-62594554 None:intergenic 20.0%
!!! TTTATAACATGCTTTGATTT+TGG + chr8_3:62594657-62594676 Msa1300860:intron 20.0%
!!! TGATTTTGGTTTTCATAATT+AGG + chr8_3:62594671-62594690 Msa1300860:intron 20.0%
!!! GATTTTGGTTTTCATAATTA+GGG + chr8_3:62594672-62594691 Msa1300860:intron 20.0%
!! TAAAATTACAAAACCAAAGT+AGG - chr8_3:62595023-62595042 None:intergenic 20.0%
!! CATCTATCATTGTAAAAAAA+AGG - chr8_3:62595296-62595315 None:intergenic 20.0%
!!! CTTTTTTTTACAATGATAGA+TGG + chr8_3:62595294-62595313 Msa1300860:intron 20.0%
!! AAAAATGTAATAGTTAGACT+TGG - chr8_3:62595385-62595404 None:intergenic 20.0%
!! ATAGTTATTACACATTTACA+TGG - chr8_3:62595619-62595638 None:intergenic 20.0%
!! GTCAGGAAATATTATAATAA+TGG - chr8_3:62595668-62595687 None:intergenic 20.0%
!! ATTGTATAATACATAACTAG+AGG + chr8_3:62595912-62595931 Msa1300860:intron 20.0%
!! TTGTATAATACATAACTAGA+GGG + chr8_3:62595913-62595932 Msa1300860:intron 20.0%
!!! TTTTTAATTGAGTATTCTCA+AGG + chr8_3:62596510-62596529 Msa1300860:intron 20.0%
!!! TTTTAATTGAGTATTCTCAA+GGG + chr8_3:62596511-62596530 Msa1300860:intron 20.0%
!!! GGTTTTTTTTGTTGTTTGTT+TGG - chr8_3:62594253-62594272 None:intergenic 25.0%
! GATAAAGAGAGAAAATACTT+AGG - chr8_3:62594274-62594293 None:intergenic 25.0%
!!! TAATTCTTTGATTTTCGTGT+TGG + chr8_3:62594610-62594629 Msa1300860:intron 25.0%
!! AAGATTCATGTCTAAGATTT+AGG + chr8_3:62594763-62594782 Msa1300860:intron 25.0%
!! TATTTTGTTCTCTGAATTTG+AGG + chr8_3:62594786-62594805 Msa1300860:intron 25.0%
! TGTGTTTATTTGTTTGTTCT+AGG + chr8_3:62595230-62595249 Msa1300860:intron 25.0%
! GTGTTTATTTGTTTGTTCTA+GGG + chr8_3:62595231-62595250 Msa1300860:intron 25.0%
! AAAAAAGGTTGTTACATAGT+GGG - chr8_3:62595708-62595727 None:intergenic 25.0%
! TAAAAAAGGTTGTTACATAG+TGG - chr8_3:62595709-62595728 None:intergenic 25.0%
! GAAAAAATAGTGAGTTTGTA+TGG - chr8_3:62595869-62595888 None:intergenic 25.0%
!!! ACAAACTCACTATTTTTTCT+AGG + chr8_3:62595870-62595889 Msa1300860:intron 25.0%
! TGTATAATACATAACTAGAG+GGG + chr8_3:62595914-62595933 Msa1300860:intron 25.0%
!!! TTTTTGGTACATAGAAGAAA+TGG + chr8_3:62596289-62596308 Msa1300860:intron 25.0%
!!! AATTTTTTGATCAAGAGAAG+AGG + chr8_3:62596479-62596498 Msa1300860:intron 25.0%
!! TGTTAACTTTTACAAGACTT+TGG - chr8_3:62596598-62596617 None:intergenic 25.0%
! TCTTGTAAAAGTTAACAACT+TGG + chr8_3:62596601-62596620 Msa1300860:intron 25.0%
!!! AACACAATCTCATTTTTCTT+GGG - chr8_3:62596732-62596751 None:intergenic 25.0%
!!! GAGAAGTATTTGAAAACTAA+CGG + chr8_3:62596795-62596814 Msa1300860:CDS 25.0%
! AATCAAATTCCGATATGTTT+GGG - chr8_3:62596824-62596843 None:intergenic 25.0%
! AAACATATCGGAATTTGATT+GGG + chr8_3:62596824-62596843 Msa1300860:CDS 25.0%
! TAACGAAAATGAAGATAAGA+AGG + chr8_3:62597070-62597089 Msa1300860:CDS 25.0%
! AACGAAAATGAAGATAAGAA+GGG + chr8_3:62597071-62597090 Msa1300860:CDS 25.0%
! AGAAACTACTTATATTGCAA+AGG + chr8_3:62597133-62597152 Msa1300860:CDS 25.0%
! AATAAGGATGTAGAAAAGAT+TGG + chr8_3:62597248-62597267 Msa1300860:CDS 25.0%
! AGAGTTTATTGTATTCATTC+AGG - chr8_3:62597692-62597711 None:intergenic 25.0%
! GAATGAATACAATAAACTCT+TGG + chr8_3:62597692-62597711 Msa1300860:three_prime_UTR 25.0%
! TAGGTTCATATCATATTACA+GGG - chr8_3:62597936-62597955 None:intergenic 25.0%
! ATAGGTTCATATCATATTAC+AGG - chr8_3:62597937-62597956 None:intergenic 25.0%
!! TAAACACATATTTAGGATCA+AGG - chr8_3:62597972-62597991 None:intergenic 25.0%
! ATTGGAGTAAACACATATTT+AGG - chr8_3:62597979-62597998 None:intergenic 25.0%
!!! GGTTTTTTTTGTTGTTTGTT+TGG - chr8_3:62594253-62594272 None:intergenic 25.0%
! GATAAAGAGAGAAAATACTT+AGG - chr8_3:62594274-62594293 None:intergenic 25.0%
!!! TAATTCTTTGATTTTCGTGT+TGG + chr8_3:62594610-62594629 Msa1300860:intron 25.0%
!! AAGATTCATGTCTAAGATTT+AGG + chr8_3:62594763-62594782 Msa1300860:intron 25.0%
!! TATTTTGTTCTCTGAATTTG+AGG + chr8_3:62594786-62594805 Msa1300860:intron 25.0%
! TGTGTTTATTTGTTTGTTCT+AGG + chr8_3:62595230-62595249 Msa1300860:intron 25.0%
! GTGTTTATTTGTTTGTTCTA+GGG + chr8_3:62595231-62595250 Msa1300860:intron 25.0%
! AAAAAAGGTTGTTACATAGT+GGG - chr8_3:62595708-62595727 None:intergenic 25.0%
! TAAAAAAGGTTGTTACATAG+TGG - chr8_3:62595709-62595728 None:intergenic 25.0%
! GAAAAAATAGTGAGTTTGTA+TGG - chr8_3:62595869-62595888 None:intergenic 25.0%
!!! ACAAACTCACTATTTTTTCT+AGG + chr8_3:62595870-62595889 Msa1300860:intron 25.0%
! TGTATAATACATAACTAGAG+GGG + chr8_3:62595914-62595933 Msa1300860:intron 25.0%
!!! TTTTTGGTACATAGAAGAAA+TGG + chr8_3:62596289-62596308 Msa1300860:intron 25.0%
!!! AATTTTTTGATCAAGAGAAG+AGG + chr8_3:62596479-62596498 Msa1300860:intron 25.0%
!! TGTTAACTTTTACAAGACTT+TGG - chr8_3:62596598-62596617 None:intergenic 25.0%
! TCTTGTAAAAGTTAACAACT+TGG + chr8_3:62596601-62596620 Msa1300860:intron 25.0%
!!! AACACAATCTCATTTTTCTT+GGG - chr8_3:62596732-62596751 None:intergenic 25.0%
!!! GAGAAGTATTTGAAAACTAA+CGG + chr8_3:62596795-62596814 Msa1300860:CDS 25.0%
! AATCAAATTCCGATATGTTT+GGG - chr8_3:62596824-62596843 None:intergenic 25.0%
! AAACATATCGGAATTTGATT+GGG + chr8_3:62596824-62596843 Msa1300860:CDS 25.0%
! TAACGAAAATGAAGATAAGA+AGG + chr8_3:62597070-62597089 Msa1300860:CDS 25.0%
! AACGAAAATGAAGATAAGAA+GGG + chr8_3:62597071-62597090 Msa1300860:CDS 25.0%
! AGAAACTACTTATATTGCAA+AGG + chr8_3:62597133-62597152 Msa1300860:CDS 25.0%
! AATAAGGATGTAGAAAAGAT+TGG + chr8_3:62597248-62597267 Msa1300860:CDS 25.0%
! AGAGTTTATTGTATTCATTC+AGG - chr8_3:62597692-62597711 None:intergenic 25.0%
! GAATGAATACAATAAACTCT+TGG + chr8_3:62597692-62597711 Msa1300860:three_prime_UTR 25.0%
! TAGGTTCATATCATATTACA+GGG - chr8_3:62597936-62597955 None:intergenic 25.0%
! ATAGGTTCATATCATATTAC+AGG - chr8_3:62597937-62597956 None:intergenic 25.0%
!! TAAACACATATTTAGGATCA+AGG - chr8_3:62597972-62597991 None:intergenic 25.0%
! ATTGGAGTAAACACATATTT+AGG - chr8_3:62597979-62597998 None:intergenic 25.0%
!! TTTTTGGGAATTCTTTTTGC+AGG + chr8_3:62594401-62594420 Msa1300860:intron 30.0%
! ATTCTTTTTGCAGGTGAAAA+TGG + chr8_3:62594410-62594429 Msa1300860:intron 30.0%
! GGTTTTCATAATTAGGGATT+TGG + chr8_3:62594678-62594697 Msa1300860:intron 30.0%
TTGAGGAATTGTATAGTTTC+TGG + chr8_3:62594803-62594822 Msa1300860:intron 30.0%
TGAGGAATTGTATAGTTTCT+GGG + chr8_3:62594804-62594823 Msa1300860:intron 30.0%
ACGGTATTTCTTAAATTGTG+AGG + chr8_3:62594881-62594900 Msa1300860:intron 30.0%
TTTGCTTAAAGTGTACATTG+TGG + chr8_3:62594979-62594998 Msa1300860:intron 30.0%
! TCATTGATCTTCTTTTCACT+TGG + chr8_3:62595105-62595124 Msa1300860:intron 30.0%
! ACGACTTTTGTGCATTTTAT+AGG + chr8_3:62595157-62595176 Msa1300860:intron 30.0%
! TTTTGTGCATTTTATAGGTC+TGG + chr8_3:62595162-62595181 Msa1300860:intron 30.0%
! TTTGTGCATTTTATAGGTCT+GGG + chr8_3:62595163-62595182 Msa1300860:intron 30.0%
!! GTGTTTGTTTTCTAAACGAT+AGG + chr8_3:62595332-62595351 Msa1300860:intron 30.0%
AATAGTTAGACTTGGATAAC+AGG - chr8_3:62595377-62595396 None:intergenic 30.0%
AAAATATACTTGAGCCAGTA+GGG - chr8_3:62595452-62595471 None:intergenic 30.0%
! TATATTTTCTTTCACACACC+AGG + chr8_3:62595464-62595483 Msa1300860:intron 30.0%
AAAATCATTAGCGATTGCAT+GGG - chr8_3:62595775-62595794 None:intergenic 30.0%
AAAAATCATTAGCGATTGCA+TGG - chr8_3:62595776-62595795 None:intergenic 30.0%
AGTGAGTTTGTATGGAAATT+GGG - chr8_3:62595861-62595880 None:intergenic 30.0%
TAGTGAGTTTGTATGGAAAT+TGG - chr8_3:62595862-62595881 None:intergenic 30.0%
GTATTATACAATAACCCAGA+GGG - chr8_3:62595904-62595923 None:intergenic 30.0%
TGTATTATACAATAACCCAG+AGG - chr8_3:62595905-62595924 None:intergenic 30.0%
! ATTTTCTTGAGACAAACAGT+TGG + chr8_3:62595975-62595994 Msa1300860:intron 30.0%
!!! CTATTACTGCAGTTTTAGAT+TGG + chr8_3:62596031-62596050 Msa1300860:intron 30.0%
AACACAAAAATGGACACATA+TGG - chr8_3:62596076-62596095 None:intergenic 30.0%
ATGACCAAGAAACACAAAAA+TGG - chr8_3:62596086-62596105 None:intergenic 30.0%
CCAAAAACAAAAAACACCAT+AGG - chr8_3:62596276-62596295 None:intergenic 30.0%
!!! CCTATGGTGTTTTTTGTTTT+TGG + chr8_3:62596273-62596292 Msa1300860:intron 30.0%
GAAAAAATGCCGAAATTGTT+AGG - chr8_3:62596382-62596401 None:intergenic 30.0%
!! GAACACAATCTCATTTTTCT+TGG - chr8_3:62596733-62596752 None:intergenic 30.0%
AAGTATTTGAAAACTAACGG+TGG + chr8_3:62596798-62596817 Msa1300860:CDS 30.0%
CAATCAAATTCCGATATGTT+TGG - chr8_3:62596825-62596844 None:intergenic 30.0%
CAAACATATCGGAATTTGAT+TGG + chr8_3:62596823-62596842 Msa1300860:CDS 30.0%
AACATATCGGAATTTGATTG+GGG + chr8_3:62596825-62596844 Msa1300860:CDS 30.0%
TACTTATATTGCAAAGGATG+AGG + chr8_3:62597139-62597158 Msa1300860:CDS 30.0%
ACTTATATTGCAAAGGATGA+GGG + chr8_3:62597140-62597159 Msa1300860:CDS 30.0%
AAAGAGAATATTGACGACAA+AGG + chr8_3:62597200-62597219 Msa1300860:CDS 30.0%
ACAAAGCAAGAAGAAAAGAT+TGG + chr8_3:62597287-62597306 Msa1300860:CDS 30.0%
ACAAAGCAAGAAGAAAAGAT+TGG + chr8_3:62597287-62597306 Msa1300860:CDS 30.0%
AAAATAAAGAGGAAGATGAC+AGG + chr8_3:62597525-62597544 Msa1300860:CDS 30.0%
TTATCCTCAGATAGATCTAA+AGG - chr8_3:62597735-62597754 None:intergenic 30.0%
! TAGATGGATGGTACATTTTA+CGG - chr8_3:62597859-62597878 None:intergenic 30.0%
CTTACAACACAATGTTACAT+GGG - chr8_3:62597911-62597930 None:intergenic 30.0%
TCTTACAACACAATGTTACA+TGG - chr8_3:62597912-62597931 None:intergenic 30.0%
TACCAAACACATACTTGAAT+TGG - chr8_3:62597997-62598016 None:intergenic 30.0%
!! TTTTTGGGAATTCTTTTTGC+AGG + chr8_3:62594401-62594420 Msa1300860:intron 30.0%
! ATTCTTTTTGCAGGTGAAAA+TGG + chr8_3:62594410-62594429 Msa1300860:intron 30.0%
! GGTTTTCATAATTAGGGATT+TGG + chr8_3:62594678-62594697 Msa1300860:intron 30.0%
TTGAGGAATTGTATAGTTTC+TGG + chr8_3:62594803-62594822 Msa1300860:intron 30.0%
TGAGGAATTGTATAGTTTCT+GGG + chr8_3:62594804-62594823 Msa1300860:intron 30.0%
ACGGTATTTCTTAAATTGTG+AGG + chr8_3:62594881-62594900 Msa1300860:intron 30.0%
TTTGCTTAAAGTGTACATTG+TGG + chr8_3:62594979-62594998 Msa1300860:intron 30.0%
! TCATTGATCTTCTTTTCACT+TGG + chr8_3:62595105-62595124 Msa1300860:intron 30.0%
! ACGACTTTTGTGCATTTTAT+AGG + chr8_3:62595157-62595176 Msa1300860:intron 30.0%
! TTTTGTGCATTTTATAGGTC+TGG + chr8_3:62595162-62595181 Msa1300860:intron 30.0%
! TTTGTGCATTTTATAGGTCT+GGG + chr8_3:62595163-62595182 Msa1300860:intron 30.0%
!! GTGTTTGTTTTCTAAACGAT+AGG + chr8_3:62595332-62595351 Msa1300860:intron 30.0%
AATAGTTAGACTTGGATAAC+AGG - chr8_3:62595377-62595396 None:intergenic 30.0%
AAAATATACTTGAGCCAGTA+GGG - chr8_3:62595452-62595471 None:intergenic 30.0%
! TATATTTTCTTTCACACACC+AGG + chr8_3:62595464-62595483 Msa1300860:intron 30.0%
AAAATCATTAGCGATTGCAT+GGG - chr8_3:62595775-62595794 None:intergenic 30.0%
AAAAATCATTAGCGATTGCA+TGG - chr8_3:62595776-62595795 None:intergenic 30.0%
AGTGAGTTTGTATGGAAATT+GGG - chr8_3:62595861-62595880 None:intergenic 30.0%
TAGTGAGTTTGTATGGAAAT+TGG - chr8_3:62595862-62595881 None:intergenic 30.0%
GTATTATACAATAACCCAGA+GGG - chr8_3:62595904-62595923 None:intergenic 30.0%
TGTATTATACAATAACCCAG+AGG - chr8_3:62595905-62595924 None:intergenic 30.0%
! ATTTTCTTGAGACAAACAGT+TGG + chr8_3:62595975-62595994 Msa1300860:intron 30.0%
!!! CTATTACTGCAGTTTTAGAT+TGG + chr8_3:62596031-62596050 Msa1300860:intron 30.0%
AACACAAAAATGGACACATA+TGG - chr8_3:62596076-62596095 None:intergenic 30.0%
ATGACCAAGAAACACAAAAA+TGG - chr8_3:62596086-62596105 None:intergenic 30.0%
CCAAAAACAAAAAACACCAT+AGG - chr8_3:62596276-62596295 None:intergenic 30.0%
!!! CCTATGGTGTTTTTTGTTTT+TGG + chr8_3:62596273-62596292 Msa1300860:intron 30.0%
GAAAAAATGCCGAAATTGTT+AGG - chr8_3:62596382-62596401 None:intergenic 30.0%
!! GAACACAATCTCATTTTTCT+TGG - chr8_3:62596733-62596752 None:intergenic 30.0%
AAGTATTTGAAAACTAACGG+TGG + chr8_3:62596798-62596817 Msa1300860:CDS 30.0%
CAATCAAATTCCGATATGTT+TGG - chr8_3:62596825-62596844 None:intergenic 30.0%
CAAACATATCGGAATTTGAT+TGG + chr8_3:62596823-62596842 Msa1300860:CDS 30.0%
AACATATCGGAATTTGATTG+GGG + chr8_3:62596825-62596844 Msa1300860:CDS 30.0%
TACTTATATTGCAAAGGATG+AGG + chr8_3:62597139-62597158 Msa1300860:CDS 30.0%
ACTTATATTGCAAAGGATGA+GGG + chr8_3:62597140-62597159 Msa1300860:CDS 30.0%
AAAGAGAATATTGACGACAA+AGG + chr8_3:62597200-62597219 Msa1300860:CDS 30.0%
ACAAAGCAAGAAGAAAAGAT+TGG + chr8_3:62597287-62597306 Msa1300860:CDS 30.0%
ACAAAGCAAGAAGAAAAGAT+TGG + chr8_3:62597287-62597306 Msa1300860:CDS 30.0%
AAAATAAAGAGGAAGATGAC+AGG + chr8_3:62597525-62597544 Msa1300860:CDS 30.0%
TTATCCTCAGATAGATCTAA+AGG - chr8_3:62597735-62597754 None:intergenic 30.0%
! TAGATGGATGGTACATTTTA+CGG - chr8_3:62597859-62597878 None:intergenic 30.0%
CTTACAACACAATGTTACAT+GGG - chr8_3:62597911-62597930 None:intergenic 30.0%
TCTTACAACACAATGTTACA+TGG - chr8_3:62597912-62597931 None:intergenic 30.0%
TACCAAACACATACTTGAAT+TGG - chr8_3:62597997-62598016 None:intergenic 30.0%
!!! TGTGCGTGTTTTTAAGTGTA+AGG - chr8_3:62594185-62594204 None:intergenic 35.0%
GAAATACCGTCACGAAAATA+GGG - chr8_3:62594871-62594890 None:intergenic 35.0%
AGAAATACCGTCACGAAAAT+AGG - chr8_3:62594872-62594891 None:intergenic 35.0%
TACATTGTGGCTTACTCTTT+GGG + chr8_3:62594992-62595011 Msa1300860:intron 35.0%
! TCTTTGGGAATTTCCTACTT+TGG + chr8_3:62595007-62595026 Msa1300860:intron 35.0%
ATGATACAAACAACTAGCTC+AGG - chr8_3:62595089-62595108 None:intergenic 35.0%
TTCACTTGGACTGTTAAACA+TGG + chr8_3:62595119-62595138 Msa1300860:intron 35.0%
AAGAAATCATTACCATCCCA+TGG - chr8_3:62595194-62595213 None:intergenic 35.0%
GAAAATATACTTGAGCCAGT+AGG - chr8_3:62595453-62595472 None:intergenic 35.0%
ATACCCACATATAAGTCAGT+AGG + chr8_3:62595570-62595589 Msa1300860:intron 35.0%
TACCCACATATAAGTCAGTA+GGG + chr8_3:62595571-62595590 Msa1300860:intron 35.0%
CATTTACATGGTAAGAAACG+TGG - chr8_3:62595607-62595626 None:intergenic 35.0%
! AGATCACATCAGGTTAGTTA+GGG - chr8_3:62595832-62595851 None:intergenic 35.0%
! AAGATCACATCAGGTTAGTT+AGG - chr8_3:62595833-62595852 None:intergenic 35.0%
!!! CTGCAGTTTTAGATTGGAAA+TGG + chr8_3:62596037-62596056 Msa1300860:intron 35.0%
!! GTGTCCATTTTTGTGTTTCT+TGG + chr8_3:62596079-62596098 Msa1300860:intron 35.0%
CTGAATGGAAGGATTAAAGA+GGG + chr8_3:62596157-62596176 Msa1300860:intron 35.0%
ATTAACCTTGTTCAGTCTGA+AGG - chr8_3:62596192-62596211 None:intergenic 35.0%
CAGACTGAACAAGGTTAATT+TGG + chr8_3:62596193-62596212 Msa1300860:intron 35.0%
CTTTGTGTGTGAGTTTATGA+TGG - chr8_3:62596320-62596339 None:intergenic 35.0%
TCATAAACTCACACACAAAG+TGG + chr8_3:62596320-62596339 Msa1300860:intron 35.0%
CAGTTCTTTCCAAAAAAGTC+AGG + chr8_3:62596702-62596721 Msa1300860:intron 35.0%
ACAATTCTCGATGATCTTCT+TGG - chr8_3:62596864-62596883 None:intergenic 35.0%
ATCATCGAGAATTGTTGAGA+AGG + chr8_3:62596869-62596888 Msa1300860:CDS 35.0%
ACTTTCTGCTACGTTTCTTA+GGG - chr8_3:62596932-62596951 None:intergenic 35.0%
TTCAAAGAAAGAAGCTTCTG+AGG + chr8_3:62596959-62596978 Msa1300860:CDS 35.0%
! TCGTTAACAACTTCCTTTTC+CGG - chr8_3:62597056-62597075 None:intergenic 35.0%
GCAATATAAGTAGTTTCTCC+AGG - chr8_3:62597131-62597150 None:intergenic 35.0%
CTTATATTGCAAAGGATGAG+GGG + chr8_3:62597141-62597160 Msa1300860:CDS 35.0%
CAAGGTTCATGATATGAACA+AGG + chr8_3:62597616-62597635 Msa1300860:CDS 35.0%
ATGTCTCTTCACAACATAGA+TGG - chr8_3:62597875-62597894 None:intergenic 35.0%
TCAAGGTCTCACATGATTAT+AGG - chr8_3:62597955-62597974 None:intergenic 35.0%
CTCCAATTCAAGTATGTGTT+TGG + chr8_3:62597992-62598011 Msa1300860:three_prime_UTR 35.0%
GAAGAAAAAAAACGCTGCAA+AGG - chr8_3:62598067-62598086 None:intergenic 35.0%
!!! TGTGCGTGTTTTTAAGTGTA+AGG - chr8_3:62594185-62594204 None:intergenic 35.0%
GAAATACCGTCACGAAAATA+GGG - chr8_3:62594871-62594890 None:intergenic 35.0%
AGAAATACCGTCACGAAAAT+AGG - chr8_3:62594872-62594891 None:intergenic 35.0%
TACATTGTGGCTTACTCTTT+GGG + chr8_3:62594992-62595011 Msa1300860:intron 35.0%
! TCTTTGGGAATTTCCTACTT+TGG + chr8_3:62595007-62595026 Msa1300860:intron 35.0%
ATGATACAAACAACTAGCTC+AGG - chr8_3:62595089-62595108 None:intergenic 35.0%
TTCACTTGGACTGTTAAACA+TGG + chr8_3:62595119-62595138 Msa1300860:intron 35.0%
AAGAAATCATTACCATCCCA+TGG - chr8_3:62595194-62595213 None:intergenic 35.0%
GAAAATATACTTGAGCCAGT+AGG - chr8_3:62595453-62595472 None:intergenic 35.0%
ATACCCACATATAAGTCAGT+AGG + chr8_3:62595570-62595589 Msa1300860:intron 35.0%
TACCCACATATAAGTCAGTA+GGG + chr8_3:62595571-62595590 Msa1300860:intron 35.0%
CATTTACATGGTAAGAAACG+TGG - chr8_3:62595607-62595626 None:intergenic 35.0%
! AGATCACATCAGGTTAGTTA+GGG - chr8_3:62595832-62595851 None:intergenic 35.0%
! AAGATCACATCAGGTTAGTT+AGG - chr8_3:62595833-62595852 None:intergenic 35.0%
!!! CTGCAGTTTTAGATTGGAAA+TGG + chr8_3:62596037-62596056 Msa1300860:intron 35.0%
!! GTGTCCATTTTTGTGTTTCT+TGG + chr8_3:62596079-62596098 Msa1300860:intron 35.0%
CTGAATGGAAGGATTAAAGA+GGG + chr8_3:62596157-62596176 Msa1300860:intron 35.0%
ATTAACCTTGTTCAGTCTGA+AGG - chr8_3:62596192-62596211 None:intergenic 35.0%
CAGACTGAACAAGGTTAATT+TGG + chr8_3:62596193-62596212 Msa1300860:intron 35.0%
CTTTGTGTGTGAGTTTATGA+TGG - chr8_3:62596320-62596339 None:intergenic 35.0%
TCATAAACTCACACACAAAG+TGG + chr8_3:62596320-62596339 Msa1300860:intron 35.0%
CAGTTCTTTCCAAAAAAGTC+AGG + chr8_3:62596702-62596721 Msa1300860:intron 35.0%
ACAATTCTCGATGATCTTCT+TGG - chr8_3:62596864-62596883 None:intergenic 35.0%
ATCATCGAGAATTGTTGAGA+AGG + chr8_3:62596869-62596888 Msa1300860:CDS 35.0%
ACTTTCTGCTACGTTTCTTA+GGG - chr8_3:62596932-62596951 None:intergenic 35.0%
TTCAAAGAAAGAAGCTTCTG+AGG + chr8_3:62596959-62596978 Msa1300860:CDS 35.0%
! TCGTTAACAACTTCCTTTTC+CGG - chr8_3:62597056-62597075 None:intergenic 35.0%
GCAATATAAGTAGTTTCTCC+AGG - chr8_3:62597131-62597150 None:intergenic 35.0%
CTTATATTGCAAAGGATGAG+GGG + chr8_3:62597141-62597160 Msa1300860:CDS 35.0%
CAAGGTTCATGATATGAACA+AGG + chr8_3:62597616-62597635 Msa1300860:CDS 35.0%
ATGTCTCTTCACAACATAGA+TGG - chr8_3:62597875-62597894 None:intergenic 35.0%
TCAAGGTCTCACATGATTAT+AGG - chr8_3:62597955-62597974 None:intergenic 35.0%
CTCCAATTCAAGTATGTGTT+TGG + chr8_3:62597992-62598011 Msa1300860:three_prime_UTR 35.0%
GAAGAAAAAAAACGCTGCAA+AGG - chr8_3:62598067-62598086 None:intergenic 35.0%
!!! GCGTGTTTTTAAGTGTAAGG+TGG - chr8_3:62594182-62594201 None:intergenic 40.0%
AGAATCTTGAAAACCCTAGC+AGG - chr8_3:62594840-62594859 None:intergenic 40.0%
GTACATTGTGGCTTACTCTT+TGG + chr8_3:62594991-62595010 Msa1300860:intron 40.0%
! TATAGGTCTGGGATTTACCA+TGG + chr8_3:62595174-62595193 Msa1300860:intron 40.0%
! ATAGGTCTGGGATTTACCAT+GGG + chr8_3:62595175-62595194 Msa1300860:intron 40.0%
AACAAACACTATACCCCATG+AGG - chr8_3:62595321-62595340 None:intergenic 40.0%
ACTGTGTTCAACATACGATG+TGG - chr8_3:62595532-62595551 None:intergenic 40.0%
!! CTCCCTACTGACTTATATGT+GGG - chr8_3:62595576-62595595 None:intergenic 40.0%
TATTTCCTGACATTGTGCAC+TGG + chr8_3:62595677-62595696 Msa1300860:intron 40.0%
TTTATCCAGTGCACAATGTC+AGG - chr8_3:62595685-62595704 None:intergenic 40.0%
GCATGGGTTTGTAAAACTCA+GGG - chr8_3:62595759-62595778 None:intergenic 40.0%
TGCATGGGTTTGTAAAACTC+AGG - chr8_3:62595760-62595779 None:intergenic 40.0%
! GATCACATCAGGTTAGTTAG+GGG - chr8_3:62595831-62595850 None:intergenic 40.0%
!! AACTAGAGGGGCATCTATAT+TGG + chr8_3:62595926-62595945 Msa1300860:intron 40.0%
TTCTTGGTCATTATGAGCCA+TGG + chr8_3:62596095-62596114 Msa1300860:intron 40.0%
CCTCTTTAATCCTTCCATTC+AGG - chr8_3:62596159-62596178 None:intergenic 40.0%
CCTGAATGGAAGGATTAAAG+AGG + chr8_3:62596156-62596175 Msa1300860:intron 40.0%
AAAAGCCTTCAGACTGAACA+AGG + chr8_3:62596184-62596203 Msa1300860:intron 40.0%
!! TCAGTAAGAGAGTACTAGCA+GGG - chr8_3:62596221-62596240 None:intergenic 40.0%
!! ATCAGTAAGAGAGTACTAGC+AGG - chr8_3:62596222-62596241 None:intergenic 40.0%
TAAACTCACACACAAAGTGG+AGG + chr8_3:62596323-62596342 Msa1300860:intron 40.0%
AAATGCCGAAATTGTTAGGC+CGG - chr8_3:62596378-62596397 None:intergenic 40.0%
!!! GCATTTTTTCCAGTTGAGCT+AGG + chr8_3:62596392-62596411 Msa1300860:intron 40.0%
ACTGCCTATGGTGTTTAACT+AGG + chr8_3:62596424-62596443 Msa1300860:intron 40.0%
AGTGCCTAGTTAAACACCAT+AGG - chr8_3:62596431-62596450 None:intergenic 40.0%
!!! TTGGGTGTTCCTGACTTTTT+TGG - chr8_3:62596714-62596733 None:intergenic 40.0%
ATTGTGTTCACTTCACCAAC+AGG + chr8_3:62596744-62596763 Msa1300860:CDS 40.0%
! ATACTTCTCCAGATGCCTTT+TGG - chr8_3:62596784-62596803 None:intergenic 40.0%
GAGAATTGTTGAGAAGGTCA+AGG + chr8_3:62596875-62596894 Msa1300860:CDS 40.0%
TTTCTGCTACGTTTCTTAGG+GGG - chr8_3:62596930-62596949 None:intergenic 40.0%
CTTTCTGCTACGTTTCTTAG+GGG - chr8_3:62596931-62596950 None:intergenic 40.0%
GACTTTCTGCTACGTTTCTT+AGG - chr8_3:62596933-62596952 None:intergenic 40.0%
TGGTGAAACTAAGGATGACA+AGG + chr8_3:62597022-62597041 Msa1300860:CDS 40.0%
! GTCTGGAGTTGTTCAGAATA+AGG + chr8_3:62597232-62597251 Msa1300860:CDS 40.0%
AGAAAAGATTGAACAGCCAG+TGG + chr8_3:62597376-62597395 Msa1300860:CDS 40.0%
AGTGGATGGCGAAAATAAAG+AGG + chr8_3:62597514-62597533 Msa1300860:CDS 40.0%
GCATGATGAAGCAAACTACA+AGG + chr8_3:62597598-62597617 Msa1300860:CDS 40.0%
TATGAACAAGGCTGAATCAG+AGG + chr8_3:62597628-62597647 Msa1300860:CDS 40.0%
GAATGGAAGCTGAATTGTTG+AGG + chr8_3:62597658-62597677 Msa1300860:exon 40.0%
CTCTTCACAACATAGATGGA+TGG - chr8_3:62597871-62597890 None:intergenic 40.0%
!!! GCGTGTTTTTAAGTGTAAGG+TGG - chr8_3:62594182-62594201 None:intergenic 40.0%
AGAATCTTGAAAACCCTAGC+AGG - chr8_3:62594840-62594859 None:intergenic 40.0%
GTACATTGTGGCTTACTCTT+TGG + chr8_3:62594991-62595010 Msa1300860:intron 40.0%
! TATAGGTCTGGGATTTACCA+TGG + chr8_3:62595174-62595193 Msa1300860:intron 40.0%
! ATAGGTCTGGGATTTACCAT+GGG + chr8_3:62595175-62595194 Msa1300860:intron 40.0%
AACAAACACTATACCCCATG+AGG - chr8_3:62595321-62595340 None:intergenic 40.0%
ACTGTGTTCAACATACGATG+TGG - chr8_3:62595532-62595551 None:intergenic 40.0%
!! CTCCCTACTGACTTATATGT+GGG - chr8_3:62595576-62595595 None:intergenic 40.0%
TATTTCCTGACATTGTGCAC+TGG + chr8_3:62595677-62595696 Msa1300860:intron 40.0%
TTTATCCAGTGCACAATGTC+AGG - chr8_3:62595685-62595704 None:intergenic 40.0%
GCATGGGTTTGTAAAACTCA+GGG - chr8_3:62595759-62595778 None:intergenic 40.0%
TGCATGGGTTTGTAAAACTC+AGG - chr8_3:62595760-62595779 None:intergenic 40.0%
! GATCACATCAGGTTAGTTAG+GGG - chr8_3:62595831-62595850 None:intergenic 40.0%
!! AACTAGAGGGGCATCTATAT+TGG + chr8_3:62595926-62595945 Msa1300860:intron 40.0%
TTCTTGGTCATTATGAGCCA+TGG + chr8_3:62596095-62596114 Msa1300860:intron 40.0%
CCTCTTTAATCCTTCCATTC+AGG - chr8_3:62596159-62596178 None:intergenic 40.0%
CCTGAATGGAAGGATTAAAG+AGG + chr8_3:62596156-62596175 Msa1300860:intron 40.0%
AAAAGCCTTCAGACTGAACA+AGG + chr8_3:62596184-62596203 Msa1300860:intron 40.0%
!! TCAGTAAGAGAGTACTAGCA+GGG - chr8_3:62596221-62596240 None:intergenic 40.0%
!! ATCAGTAAGAGAGTACTAGC+AGG - chr8_3:62596222-62596241 None:intergenic 40.0%
TAAACTCACACACAAAGTGG+AGG + chr8_3:62596323-62596342 Msa1300860:intron 40.0%
AAATGCCGAAATTGTTAGGC+CGG - chr8_3:62596378-62596397 None:intergenic 40.0%
!!! GCATTTTTTCCAGTTGAGCT+AGG + chr8_3:62596392-62596411 Msa1300860:intron 40.0%
ACTGCCTATGGTGTTTAACT+AGG + chr8_3:62596424-62596443 Msa1300860:intron 40.0%
AGTGCCTAGTTAAACACCAT+AGG - chr8_3:62596431-62596450 None:intergenic 40.0%
!!! TTGGGTGTTCCTGACTTTTT+TGG - chr8_3:62596714-62596733 None:intergenic 40.0%
ATTGTGTTCACTTCACCAAC+AGG + chr8_3:62596744-62596763 Msa1300860:CDS 40.0%
! ATACTTCTCCAGATGCCTTT+TGG - chr8_3:62596784-62596803 None:intergenic 40.0%
GAGAATTGTTGAGAAGGTCA+AGG + chr8_3:62596875-62596894 Msa1300860:CDS 40.0%
TTTCTGCTACGTTTCTTAGG+GGG - chr8_3:62596930-62596949 None:intergenic 40.0%
CTTTCTGCTACGTTTCTTAG+GGG - chr8_3:62596931-62596950 None:intergenic 40.0%
GACTTTCTGCTACGTTTCTT+AGG - chr8_3:62596933-62596952 None:intergenic 40.0%
TGGTGAAACTAAGGATGACA+AGG + chr8_3:62597022-62597041 Msa1300860:CDS 40.0%
! GTCTGGAGTTGTTCAGAATA+AGG + chr8_3:62597232-62597251 Msa1300860:CDS 40.0%
AGAAAAGATTGAACAGCCAG+TGG + chr8_3:62597376-62597395 Msa1300860:CDS 40.0%
AGTGGATGGCGAAAATAAAG+AGG + chr8_3:62597514-62597533 Msa1300860:CDS 40.0%
GCATGATGAAGCAAACTACA+AGG + chr8_3:62597598-62597617 Msa1300860:CDS 40.0%
TATGAACAAGGCTGAATCAG+AGG + chr8_3:62597628-62597647 Msa1300860:CDS 40.0%
GAATGGAAGCTGAATTGTTG+AGG + chr8_3:62597658-62597677 Msa1300860:exon 40.0%
CTCTTCACAACATAGATGGA+TGG - chr8_3:62597871-62597890 None:intergenic 40.0%
AATGGCGAGTTCAGTTGAGA+AGG + chr8_3:62594428-62594447 Msa1300860:exon 45.0%
TCAGTTGAGAAGGAAGGTTC+TGG + chr8_3:62594438-62594457 Msa1300860:CDS 45.0%
TCCATCTGGTTGGACCAAAA+AGG + chr8_3:62594518-62594537 Msa1300860:CDS 45.0%
!! ACCTTTTTGGTCCAACCAGA+TGG - chr8_3:62594522-62594541 None:intergenic 45.0%
!!! TGGGTTTTGAGTTACCTGCT+AGG + chr8_3:62594823-62594842 Msa1300860:intron 45.0%
!!! GGGTTTTGAGTTACCTGCTA+GGG + chr8_3:62594824-62594843 Msa1300860:intron 45.0%
! CTGTGTCCCTATTTTCGTGA+CGG + chr8_3:62594862-62594881 Msa1300860:intron 45.0%
ACAATGATAGATGGGCCTCA+TGG + chr8_3:62595303-62595322 Msa1300860:intron 45.0%
CAATGATAGATGGGCCTCAT+GGG + chr8_3:62595304-62595323 Msa1300860:intron 45.0%
AATGATAGATGGGCCTCATG+GGG + chr8_3:62595305-62595324 Msa1300860:intron 45.0%
TATACTTGAGCCAGTAGGGA+TGG - chr8_3:62595448-62595467 None:intergenic 45.0%
TTGCTAACCAACACTAAGCC+TGG - chr8_3:62595485-62595504 None:intergenic 45.0%
!! CCTCCCTACTGACTTATATG+TGG - chr8_3:62595577-62595596 None:intergenic 45.0%
CCACATATAAGTCAGTAGGG+AGG + chr8_3:62595574-62595593 Msa1300860:intron 45.0%
TGGGAACTGAAGATCACATC+AGG - chr8_3:62595842-62595861 None:intergenic 45.0%
GCACTGAAGACAAGTATCCA+TGG - chr8_3:62596115-62596134 None:intergenic 45.0%
CTTCCATTCAGGCTATACCT+GGG - chr8_3:62596148-62596167 None:intergenic 45.0%
TGCTAGCTCATAACTGCCTA+TGG + chr8_3:62596257-62596276 Msa1300860:intron 45.0%
TCCAGTTGAGCTAGGACTTA+TGG + chr8_3:62596400-62596419 Msa1300860:intron 45.0%
CCAGTTGAGCTAGGACTTAT+GGG + chr8_3:62596401-62596420 Msa1300860:intron 45.0%
! TCTCCAGATGCCTTTTGGTA+CGG - chr8_3:62596779-62596798 None:intergenic 45.0%
TAACGGTGGCCCAAACATAT+CGG + chr8_3:62596812-62596831 Msa1300860:CDS 45.0%
!! TTCTTAGGGGGCTCACTTTT+TGG - chr8_3:62596918-62596937 None:intergenic 45.0%
GCAAGAAGCTGGTGAAACTA+AGG + chr8_3:62597013-62597032 Msa1300860:CDS 45.0%
! GGATGACAAGGATTTAGAGC+CGG + chr8_3:62597034-62597053 Msa1300860:CDS 45.0%
! CAAGGATTTAGAGCCGGAAA+AGG + chr8_3:62597040-62597059 Msa1300860:CDS 45.0%
TGAAGATAAGAAGGGAGCAG+AGG + chr8_3:62597079-62597098 Msa1300860:CDS 45.0%
GTTAAAGAGTCCATTCGACC+TGG + chr8_3:62597110-62597129 Msa1300860:CDS 45.0%
AGTAGTTTCTCCAGGTCGAA+TGG - chr8_3:62597123-62597142 None:intergenic 45.0%
TATTGACGACAAAGGAGCTG+AGG + chr8_3:62597208-62597227 Msa1300860:CDS 45.0%
ATTGACGACAAAGGAGCTGA+GGG + chr8_3:62597209-62597228 Msa1300860:CDS 45.0%
AAAGATTGAACAGCCAGTGG+AGG + chr8_3:62597379-62597398 Msa1300860:CDS 45.0%
AGAAAAGATCAGACAGCCAG+TGG + chr8_3:62597415-62597434 Msa1300860:CDS 45.0%
GAATCAGAGGTGACTGTGAA+TGG + chr8_3:62597641-62597660 Msa1300860:CDS 45.0%
GACGCCTTTAGATCTATCTG+AGG + chr8_3:62597728-62597747 Msa1300860:three_prime_UTR 45.0%
GACGACTTGCAGTGAGTTAA+AGG + chr8_3:62598035-62598054 Msa1300860:three_prime_UTR 45.0%
CGTTGGATAACACAAGGACA+TGG - chr8_3:62598108-62598127 None:intergenic 45.0%
AATGGCGAGTTCAGTTGAGA+AGG + chr8_3:62594428-62594447 Msa1300860:exon 45.0%
TCAGTTGAGAAGGAAGGTTC+TGG + chr8_3:62594438-62594457 Msa1300860:CDS 45.0%
TCCATCTGGTTGGACCAAAA+AGG + chr8_3:62594518-62594537 Msa1300860:CDS 45.0%
!! ACCTTTTTGGTCCAACCAGA+TGG - chr8_3:62594522-62594541 None:intergenic 45.0%
!!! TGGGTTTTGAGTTACCTGCT+AGG + chr8_3:62594823-62594842 Msa1300860:intron 45.0%
!!! GGGTTTTGAGTTACCTGCTA+GGG + chr8_3:62594824-62594843 Msa1300860:intron 45.0%
! CTGTGTCCCTATTTTCGTGA+CGG + chr8_3:62594862-62594881 Msa1300860:intron 45.0%
ACAATGATAGATGGGCCTCA+TGG + chr8_3:62595303-62595322 Msa1300860:intron 45.0%
CAATGATAGATGGGCCTCAT+GGG + chr8_3:62595304-62595323 Msa1300860:intron 45.0%
AATGATAGATGGGCCTCATG+GGG + chr8_3:62595305-62595324 Msa1300860:intron 45.0%
TATACTTGAGCCAGTAGGGA+TGG - chr8_3:62595448-62595467 None:intergenic 45.0%
TTGCTAACCAACACTAAGCC+TGG - chr8_3:62595485-62595504 None:intergenic 45.0%
!! CCTCCCTACTGACTTATATG+TGG - chr8_3:62595577-62595596 None:intergenic 45.0%
CCACATATAAGTCAGTAGGG+AGG + chr8_3:62595574-62595593 Msa1300860:intron 45.0%
TGGGAACTGAAGATCACATC+AGG - chr8_3:62595842-62595861 None:intergenic 45.0%
GCACTGAAGACAAGTATCCA+TGG - chr8_3:62596115-62596134 None:intergenic 45.0%
CTTCCATTCAGGCTATACCT+GGG - chr8_3:62596148-62596167 None:intergenic 45.0%
TGCTAGCTCATAACTGCCTA+TGG + chr8_3:62596257-62596276 Msa1300860:intron 45.0%
TCCAGTTGAGCTAGGACTTA+TGG + chr8_3:62596400-62596419 Msa1300860:intron 45.0%
CCAGTTGAGCTAGGACTTAT+GGG + chr8_3:62596401-62596420 Msa1300860:intron 45.0%
! TCTCCAGATGCCTTTTGGTA+CGG - chr8_3:62596779-62596798 None:intergenic 45.0%
TAACGGTGGCCCAAACATAT+CGG + chr8_3:62596812-62596831 Msa1300860:CDS 45.0%
!! TTCTTAGGGGGCTCACTTTT+TGG - chr8_3:62596918-62596937 None:intergenic 45.0%
GCAAGAAGCTGGTGAAACTA+AGG + chr8_3:62597013-62597032 Msa1300860:CDS 45.0%
! GGATGACAAGGATTTAGAGC+CGG + chr8_3:62597034-62597053 Msa1300860:CDS 45.0%
! CAAGGATTTAGAGCCGGAAA+AGG + chr8_3:62597040-62597059 Msa1300860:CDS 45.0%
TGAAGATAAGAAGGGAGCAG+AGG + chr8_3:62597079-62597098 Msa1300860:CDS 45.0%
GTTAAAGAGTCCATTCGACC+TGG + chr8_3:62597110-62597129 Msa1300860:CDS 45.0%
AGTAGTTTCTCCAGGTCGAA+TGG - chr8_3:62597123-62597142 None:intergenic 45.0%
TATTGACGACAAAGGAGCTG+AGG + chr8_3:62597208-62597227 Msa1300860:CDS 45.0%
ATTGACGACAAAGGAGCTGA+GGG + chr8_3:62597209-62597228 Msa1300860:CDS 45.0%
AAAGATTGAACAGCCAGTGG+AGG + chr8_3:62597379-62597398 Msa1300860:CDS 45.0%
AGAAAAGATCAGACAGCCAG+TGG + chr8_3:62597415-62597434 Msa1300860:CDS 45.0%
GAATCAGAGGTGACTGTGAA+TGG + chr8_3:62597641-62597660 Msa1300860:CDS 45.0%
GACGCCTTTAGATCTATCTG+AGG + chr8_3:62597728-62597747 Msa1300860:three_prime_UTR 45.0%
GACGACTTGCAGTGAGTTAA+AGG + chr8_3:62598035-62598054 Msa1300860:three_prime_UTR 45.0%
CGTTGGATAACACAAGGACA+TGG - chr8_3:62598108-62598127 None:intergenic 45.0%
GCGAGTTCAGTTGAGAAGGA+AGG + chr8_3:62594432-62594451 Msa1300860:CDS 50.0%
!! AAGGAAGGTTCTGGTGCTGT+CGG + chr8_3:62594447-62594466 Msa1300860:CDS 50.0%
ACCAGAAGAGCCTGTTTCGT+TGG + chr8_3:62594485-62594504 Msa1300860:CDS 50.0%
TCCAACGAAACAGGCTCTTC+TGG - chr8_3:62594489-62594508 None:intergenic 50.0%
! GTCTGGGATTTACCATGGGA+TGG + chr8_3:62595179-62595198 Msa1300860:intron 50.0%
ATTCGACAGACCATCCCTAC+TGG + chr8_3:62595435-62595454 Msa1300860:intron 50.0%
TCACACACCAGGCTTAGTGT+TGG + chr8_3:62595475-62595494 Msa1300860:intron 50.0%
GATGTGGCTCATGCTCTAGT+CGG - chr8_3:62595516-62595535 None:intergenic 50.0%
TTCTAGGTACATACGCCCTC+TGG + chr8_3:62595886-62595905 Msa1300860:intron 50.0%
TCTAGGTACATACGCCCTCT+GGG + chr8_3:62595887-62595906 Msa1300860:intron 50.0%
ATTCAGGCTATACCTGGGAG+AGG - chr8_3:62596143-62596162 None:intergenic 50.0%
TCTCCCAGGTATAGCCTGAA+TGG + chr8_3:62596142-62596161 Msa1300860:intron 50.0%
CCTTCCATTCAGGCTATACC+TGG - chr8_3:62596149-62596168 None:intergenic 50.0%
CCAGGTATAGCCTGAATGGA+AGG + chr8_3:62596146-62596165 Msa1300860:intron 50.0%
GACGTCCGGCCTAACAATTT+CGG + chr8_3:62596370-62596389 Msa1300860:intron 50.0%
CCCATAAGTCCTAGCTCAAC+TGG - chr8_3:62596404-62596423 None:intergenic 50.0%
AGGACTTATGGGACTGCCTA+TGG + chr8_3:62596412-62596431 Msa1300860:intron 50.0%
GAGACGAGATCCGTACCAAA+AGG + chr8_3:62596766-62596785 Msa1300860:CDS 50.0%
!! GATCCGTACCAAAAGGCATC+TGG + chr8_3:62596773-62596792 Msa1300860:CDS 50.0%
TCGGAATTTGATTGGGGCAC+TGG + chr8_3:62596831-62596850 Msa1300860:CDS 50.0%
! CGGAATTTGATTGGGGCACT+GGG + chr8_3:62596832-62596851 Msa1300860:CDS 50.0%
!! GGAATTTGATTGGGGCACTG+GGG + chr8_3:62596833-62596852 Msa1300860:CDS 50.0%
!!! TCACTTTTTGGCTCTGCTGG+AGG - chr8_3:62596906-62596925 None:intergenic 50.0%
AGCAGAGGAGACAAAAGACG+TGG + chr8_3:62596986-62597005 Msa1300860:CDS 50.0%
GACGTGGAAATGCAAGAAGC+TGG + chr8_3:62597002-62597021 Msa1300860:CDS 50.0%
GGGAAATCCAACACTGCTGA+TGG + chr8_3:62597161-62597180 Msa1300860:CDS 50.0%
CAAGTCTCCATCAGCAGTGT+TGG - chr8_3:62597171-62597190 None:intergenic 50.0%
TTGACGACAAAGGAGCTGAG+GGG + chr8_3:62597210-62597229 Msa1300860:CDS 50.0%
AAAGATTGGACTGCCAGCAG+AGG + chr8_3:62597262-62597281 Msa1300860:CDS 50.0%
TCTTGCTTTGTCTCCTCTGC+TGG - chr8_3:62597278-62597297 None:intergenic 50.0%
AAAGATTGGACAGCCAGCAG+AGG + chr8_3:62597301-62597320 Msa1300860:CDS 50.0%
TCTTGCTTTGTCTCCTCTGC+TGG - chr8_3:62597278-62597297 None:intergenic 50.0%
AAAGATTGGACAGCCAGCAG+AGG + chr8_3:62597301-62597320 Msa1300860:CDS 50.0%
TCCTGCTTTGTATCCTCTGC+TGG - chr8_3:62597356-62597375 None:intergenic 50.0%
! TCTTGTTTCGTCTCCTCCAC+TGG - chr8_3:62597395-62597414 None:intergenic 50.0%
AAAGATCAGACAGCCAGTGG+AGG + chr8_3:62597418-62597437 Msa1300860:CDS 50.0%
!! ACGAAGCAAGATGGTGGATC+TGG + chr8_3:62597443-62597462 Msa1300860:CDS 50.0%
!! CGAAGCAAGATGGTGGATCT+GGG + chr8_3:62597444-62597463 Msa1300860:CDS 50.0%
!! GAAGCAAGATGGTGGATCTG+GGG + chr8_3:62597445-62597464 Msa1300860:CDS 50.0%
TGCCCCTACTGCTGAGAAAA+CGG + chr8_3:62597487-62597506 Msa1300860:CDS 50.0%
!! AGCCGTTTTCTCAGCAGTAG+GGG - chr8_3:62597492-62597511 None:intergenic 50.0%
!! CAGCCGTTTTCTCAGCAGTA+GGG - chr8_3:62597493-62597512 None:intergenic 50.0%
!! TCAGCCGTTTTCTCAGCAGT+AGG - chr8_3:62597494-62597513 None:intergenic 50.0%
TGCTGAGAAAACGGCTGAAG+TGG + chr8_3:62597496-62597515 Msa1300860:CDS 50.0%
GAGAAAACGGCTGAAGTGGA+TGG + chr8_3:62597500-62597519 Msa1300860:CDS 50.0%
TCTTGTCGCGTCTTTCTCCT+TGG - chr8_3:62597576-62597595 None:intergenic 50.0%
GCGAGTTCAGTTGAGAAGGA+AGG + chr8_3:62594432-62594451 Msa1300860:CDS 50.0%
!! AAGGAAGGTTCTGGTGCTGT+CGG + chr8_3:62594447-62594466 Msa1300860:CDS 50.0%
ACCAGAAGAGCCTGTTTCGT+TGG + chr8_3:62594485-62594504 Msa1300860:CDS 50.0%
TCCAACGAAACAGGCTCTTC+TGG - chr8_3:62594489-62594508 None:intergenic 50.0%
! GTCTGGGATTTACCATGGGA+TGG + chr8_3:62595179-62595198 Msa1300860:intron 50.0%
ATTCGACAGACCATCCCTAC+TGG + chr8_3:62595435-62595454 Msa1300860:intron 50.0%
TCACACACCAGGCTTAGTGT+TGG + chr8_3:62595475-62595494 Msa1300860:intron 50.0%
GATGTGGCTCATGCTCTAGT+CGG - chr8_3:62595516-62595535 None:intergenic 50.0%
TTCTAGGTACATACGCCCTC+TGG + chr8_3:62595886-62595905 Msa1300860:intron 50.0%
TCTAGGTACATACGCCCTCT+GGG + chr8_3:62595887-62595906 Msa1300860:intron 50.0%
ATTCAGGCTATACCTGGGAG+AGG - chr8_3:62596143-62596162 None:intergenic 50.0%
TCTCCCAGGTATAGCCTGAA+TGG + chr8_3:62596142-62596161 Msa1300860:intron 50.0%
CCTTCCATTCAGGCTATACC+TGG - chr8_3:62596149-62596168 None:intergenic 50.0%
CCAGGTATAGCCTGAATGGA+AGG + chr8_3:62596146-62596165 Msa1300860:intron 50.0%
GACGTCCGGCCTAACAATTT+CGG + chr8_3:62596370-62596389 Msa1300860:intron 50.0%
CCCATAAGTCCTAGCTCAAC+TGG - chr8_3:62596404-62596423 None:intergenic 50.0%
AGGACTTATGGGACTGCCTA+TGG + chr8_3:62596412-62596431 Msa1300860:intron 50.0%
GAGACGAGATCCGTACCAAA+AGG + chr8_3:62596766-62596785 Msa1300860:CDS 50.0%
!! GATCCGTACCAAAAGGCATC+TGG + chr8_3:62596773-62596792 Msa1300860:CDS 50.0%
TCGGAATTTGATTGGGGCAC+TGG + chr8_3:62596831-62596850 Msa1300860:CDS 50.0%
! CGGAATTTGATTGGGGCACT+GGG + chr8_3:62596832-62596851 Msa1300860:CDS 50.0%
!! GGAATTTGATTGGGGCACTG+GGG + chr8_3:62596833-62596852 Msa1300860:CDS 50.0%
!!! TCACTTTTTGGCTCTGCTGG+AGG - chr8_3:62596906-62596925 None:intergenic 50.0%
AGCAGAGGAGACAAAAGACG+TGG + chr8_3:62596986-62597005 Msa1300860:CDS 50.0%
GACGTGGAAATGCAAGAAGC+TGG + chr8_3:62597002-62597021 Msa1300860:CDS 50.0%
GGGAAATCCAACACTGCTGA+TGG + chr8_3:62597161-62597180 Msa1300860:CDS 50.0%
CAAGTCTCCATCAGCAGTGT+TGG - chr8_3:62597171-62597190 None:intergenic 50.0%
TTGACGACAAAGGAGCTGAG+GGG + chr8_3:62597210-62597229 Msa1300860:CDS 50.0%
AAAGATTGGACTGCCAGCAG+AGG + chr8_3:62597262-62597281 Msa1300860:CDS 50.0%
TCTTGCTTTGTCTCCTCTGC+TGG - chr8_3:62597278-62597297 None:intergenic 50.0%
AAAGATTGGACAGCCAGCAG+AGG + chr8_3:62597301-62597320 Msa1300860:CDS 50.0%
TCTTGCTTTGTCTCCTCTGC+TGG - chr8_3:62597278-62597297 None:intergenic 50.0%
AAAGATTGGACAGCCAGCAG+AGG + chr8_3:62597301-62597320 Msa1300860:CDS 50.0%
TCCTGCTTTGTATCCTCTGC+TGG - chr8_3:62597356-62597375 None:intergenic 50.0%
! TCTTGTTTCGTCTCCTCCAC+TGG - chr8_3:62597395-62597414 None:intergenic 50.0%
AAAGATCAGACAGCCAGTGG+AGG + chr8_3:62597418-62597437 Msa1300860:CDS 50.0%
!! ACGAAGCAAGATGGTGGATC+TGG + chr8_3:62597443-62597462 Msa1300860:CDS 50.0%
!! CGAAGCAAGATGGTGGATCT+GGG + chr8_3:62597444-62597463 Msa1300860:CDS 50.0%
!! GAAGCAAGATGGTGGATCTG+GGG + chr8_3:62597445-62597464 Msa1300860:CDS 50.0%
TGCCCCTACTGCTGAGAAAA+CGG + chr8_3:62597487-62597506 Msa1300860:CDS 50.0%
!! AGCCGTTTTCTCAGCAGTAG+GGG - chr8_3:62597492-62597511 None:intergenic 50.0%
!! CAGCCGTTTTCTCAGCAGTA+GGG - chr8_3:62597493-62597512 None:intergenic 50.0%
!! TCAGCCGTTTTCTCAGCAGT+AGG - chr8_3:62597494-62597513 None:intergenic 50.0%
TGCTGAGAAAACGGCTGAAG+TGG + chr8_3:62597496-62597515 Msa1300860:CDS 50.0%
GAGAAAACGGCTGAAGTGGA+TGG + chr8_3:62597500-62597519 Msa1300860:CDS 50.0%
TCTTGTCGCGTCTTTCTCCT+TGG - chr8_3:62597576-62597595 None:intergenic 50.0%
GCAGGTAGCTCCAACGAAAC+AGG - chr8_3:62594498-62594517 None:intergenic 55.0%
TTGGAGCTACCTGCTCCATC+TGG + chr8_3:62594504-62594523 Msa1300860:CDS 55.0%
AGCTACCTGCTCCATCTGGT+TGG + chr8_3:62594508-62594527 Msa1300860:CDS 55.0%
TTGGTCCAACCAGATGGAGC+AGG - chr8_3:62594516-62594535 None:intergenic 55.0%
GCTCATGCTCTAGTCGGCAT+TGG - chr8_3:62595510-62595529 None:intergenic 55.0%
! CACACACAAAGTGGAGGTGC+CGG + chr8_3:62596329-62596348 Msa1300860:intron 55.0%
!! ACACACAAAGTGGAGGTGCC+GGG + chr8_3:62596330-62596349 Msa1300860:intron 55.0%
GTACGGATCTCGTCTCCTGT+TGG - chr8_3:62596762-62596781 None:intergenic 55.0%
!!! GGCTCACTTTTTGGCTCTGC+TGG - chr8_3:62596909-62596928 None:intergenic 55.0%
! AGCTTCTGAGGACGAAGCAG+AGG + chr8_3:62596971-62596990 Msa1300860:CDS 55.0%
GCCAGCAGAGGATACAAAGC+AGG + chr8_3:62597352-62597371 Msa1300860:CDS 55.0%
TCTTGCTTCGTCTCCTCCAC+TGG - chr8_3:62597434-62597453 None:intergenic 55.0%
GTGGAGGAGACGAAGCAAGA+TGG + chr8_3:62597434-62597453 Msa1300860:CDS 55.0%
GAGGAGACGAAGCAAGATGG+TGG + chr8_3:62597437-62597456 Msa1300860:CDS 55.0%
GCAGGTAGCTCCAACGAAAC+AGG - chr8_3:62594498-62594517 None:intergenic 55.0%
TTGGAGCTACCTGCTCCATC+TGG + chr8_3:62594504-62594523 Msa1300860:CDS 55.0%
AGCTACCTGCTCCATCTGGT+TGG + chr8_3:62594508-62594527 Msa1300860:CDS 55.0%
TTGGTCCAACCAGATGGAGC+AGG - chr8_3:62594516-62594535 None:intergenic 55.0%
GCTCATGCTCTAGTCGGCAT+TGG - chr8_3:62595510-62595529 None:intergenic 55.0%
! CACACACAAAGTGGAGGTGC+CGG + chr8_3:62596329-62596348 Msa1300860:intron 55.0%
!! ACACACAAAGTGGAGGTGCC+GGG + chr8_3:62596330-62596349 Msa1300860:intron 55.0%
GTACGGATCTCGTCTCCTGT+TGG - chr8_3:62596762-62596781 None:intergenic 55.0%
!!! GGCTCACTTTTTGGCTCTGC+TGG - chr8_3:62596909-62596928 None:intergenic 55.0%
! AGCTTCTGAGGACGAAGCAG+AGG + chr8_3:62596971-62596990 Msa1300860:CDS 55.0%
GCCAGCAGAGGATACAAAGC+AGG + chr8_3:62597352-62597371 Msa1300860:CDS 55.0%
TCTTGCTTCGTCTCCTCCAC+TGG - chr8_3:62597434-62597453 None:intergenic 55.0%
GTGGAGGAGACGAAGCAAGA+TGG + chr8_3:62597434-62597453 Msa1300860:CDS 55.0%
GAGGAGACGAAGCAAGATGG+TGG + chr8_3:62597437-62597456 Msa1300860:CDS 55.0%
TCAGTGCTCACACCTCTCCC+AGG + chr8_3:62596128-62596147 Msa1300860:intron 60.0%
!! CACACAAAGTGGAGGTGCCG+GGG + chr8_3:62596331-62596350 Msa1300860:intron 60.0%
TTAGGCCGGACGTCTTGACC+GGG - chr8_3:62596364-62596383 None:intergenic 60.0%
GTTAGGCCGGACGTCTTGAC+CGG - chr8_3:62596365-62596384 None:intergenic 60.0%
GACAAAGGAGCTGAGGGGTC+TGG + chr8_3:62597215-62597234 Msa1300860:CDS 60.0%
AGATGACAGGATCACCCGCG+AGG + chr8_3:62597538-62597557 Msa1300860:CDS 60.0%
TGGTTTCACCTCCAGCCTCG+CGG - chr8_3:62597556-62597575 None:intergenic 60.0%
CGAGGCTGGAGGTGAAACCA+AGG + chr8_3:62597556-62597575 Msa1300860:CDS 60.0%
TCAGTGCTCACACCTCTCCC+AGG + chr8_3:62596128-62596147 Msa1300860:intron 60.0%
!! CACACAAAGTGGAGGTGCCG+GGG + chr8_3:62596331-62596350 Msa1300860:intron 60.0%
TTAGGCCGGACGTCTTGACC+GGG - chr8_3:62596364-62596383 None:intergenic 60.0%
GTTAGGCCGGACGTCTTGAC+CGG - chr8_3:62596365-62596384 None:intergenic 60.0%
GACAAAGGAGCTGAGGGGTC+TGG + chr8_3:62597215-62597234 Msa1300860:CDS 60.0%
AGATGACAGGATCACCCGCG+AGG + chr8_3:62597538-62597557 Msa1300860:CDS 60.0%
TGGTTTCACCTCCAGCCTCG+CGG - chr8_3:62597556-62597575 None:intergenic 60.0%
CGAGGCTGGAGGTGAAACCA+AGG + chr8_3:62597556-62597575 Msa1300860:CDS 60.0%
CTTGACCGGGGTTCGAACCC+CGG - chr8_3:62596351-62596370 None:intergenic 65.0%
CGAACCCCGGTCAAGACGTC+CGG + chr8_3:62596356-62596375 Msa1300860:intron 65.0%
TAGGCCGGACGTCTTGACCG+GGG - chr8_3:62596363-62596382 None:intergenic 65.0%
GGTTTCACCTCCAGCCTCGC+GGG - chr8_3:62597555-62597574 None:intergenic 65.0%
CTTGACCGGGGTTCGAACCC+CGG - chr8_3:62596351-62596370 None:intergenic 65.0%
CGAACCCCGGTCAAGACGTC+CGG + chr8_3:62596356-62596375 Msa1300860:intron 65.0%
TAGGCCGGACGTCTTGACCG+GGG - chr8_3:62596363-62596382 None:intergenic 65.0%
GGTTTCACCTCCAGCCTCGC+GGG - chr8_3:62597555-62597574 None:intergenic 65.0%
! GGTGCTGTCGGTGCAGCTGC+AGG + chr8_3:62594459-62594478 Msa1300860:CDS 70.0%
!! AGGTGCCGGGGTTCGAACCC+CGG + chr8_3:62596343-62596362 Msa1300860:intron 70.0%
GACAGGATCACCCGCGAGGC+TGG + chr8_3:62597542-62597561 Msa1300860:CDS 70.0%
AGGATCACCCGCGAGGCTGG+AGG + chr8_3:62597545-62597564 Msa1300860:CDS 70.0%
! GGTGCTGTCGGTGCAGCTGC+AGG + chr8_3:62594459-62594478 Msa1300860:CDS 70.0%
!! AGGTGCCGGGGTTCGAACCC+CGG + chr8_3:62596343-62596362 Msa1300860:intron 70.0%
GACAGGATCACCCGCGAGGC+TGG + chr8_3:62597542-62597561 Msa1300860:CDS 70.0%
AGGATCACCCGCGAGGCTGG+AGG + chr8_3:62597545-62597564 Msa1300860:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 62594142 62598130 62594142 ID=Msa1300860;Name=Msa1300860
chr8_3 mRNA 62594142 62598130 62594142 ID=Msa1300860-mRNA-1;Parent=Msa1300860;Name=Msa1300860-mRNA-1;_AED=0.02;_eAED=0.02;_QI=140|1|1|1|0.5|0.66|3|460|358
chr8_3 exon 62594142 62594275 62594142 ID=Msa1300860-mRNA-1:exon:18599;Parent=Msa1300860-mRNA-1
chr8_3 exon 62594423 62594539 62594423 ID=Msa1300860-mRNA-1:exon:18600;Parent=Msa1300860-mRNA-1
chr8_3 exon 62596705 62598130 62596705 ID=Msa1300860-mRNA-1:exon:18601;Parent=Msa1300860-mRNA-1
chr8_3 five_prime_UTR 62594142 62594275 62594142 ID=Msa1300860-mRNA-1:five_prime_utr;Parent=Msa1300860-mRNA-1
chr8_3 five_prime_UTR 62594423 62594428 62594423 ID=Msa1300860-mRNA-1:five_prime_utr;Parent=Msa1300860-mRNA-1
chr8_3 CDS 62594429 62594539 62594429 ID=Msa1300860-mRNA-1:cds;Parent=Msa1300860-mRNA-1
chr8_3 CDS 62596705 62597670 62596705 ID=Msa1300860-mRNA-1:cds;Parent=Msa1300860-mRNA-1
chr8_3 three_prime_UTR 62597671 62598130 62597671 ID=Msa1300860-mRNA-1:three_prime_utr;Parent=Msa1300860-mRNA-1
Gene Sequence

>Msa1300860

ATGGCGAGTTCAGTTGAGAAGGAAGGTTCTGGTGCTGTCGGTGCAGCTGCAGGTGCACCAGAAGAGCCTGTTTCGTTGGAGCTACCTGCTCCATCTGGTTGGACCAAAAAGTTCTTTCCAAAAAAGTCAGGAACACCCAAGAAAAATGAGATTGTGTTCACTTCACCAACAGGAGACGAGATCCGTACCAAAAGGCATCTGGAGAAGTATTTGAAAACTAACGGTGGCCCAAACATATCGGAATTTGATTGGGGCACTGGGGAGACTCCAAGAAGATCATCGAGAATTGTTGAGAAGGTCAAGGCAGCTCCTCCAGCAGAGCCAAAAAGTGAGCCCCCTAAGAAACGTAGCAGAAAGTCATCAGCTTCAAAGAAAGAAGCTTCTGAGGACGAAGCAGAGGAGACAAAAGACGTGGAAATGCAAGAAGCTGGTGAAACTAAGGATGACAAGGATTTAGAGCCGGAAAAGGAAGTTGTTAACGAAAATGAAGATAAGAAGGGAGCAGAGGATGCTGATGTTAAAGAGTCCATTCGACCTGGAGAAACTACTTATATTGCAAAGGATGAGGGGAAATCCAACACTGCTGATGGAGACTTGCAAGCATCAAAAGAGAATATTGACGACAAAGGAGCTGAGGGGTCTGGAGTTGTTCAGAATAAGGATGTAGAAAAGATTGGACTGCCAGCAGAGGAGACAAAGCAAGAAGAAAAGATTGGACAGCCAGCAGAGGAGACAAAGCAAGAAGAAAAGATTGGACAGCCAGCAGAGGATACAAAGCAGGAAGAAAAGATTGAACAGCCAGTGGAGGAGACGAAACAAGAAGAAAAGATCAGACAGCCAGTGGAGGAGACGAAGCAAGATGGTGGATCTGGGGAAGCAGAGAAATCTGAAGCTGCCCCTACTGCTGAGAAAACGGCTGAAGTGGATGGCGAAAATAAAGAGGAAGATGACAGGATCACCCGCGAGGCTGGAGGTGAAACCAAGGAGAAAGACGCGACAAGAGTGCATGATGAAGCAAACTACAAGGTTCATGATATGAACAAGGCTGAATCAGAGGTGACTGTGAATGGAAGCTGA

Protein sequence

>Msa1300860

MASSVEKEGSGAVGAAAGAPEEPVSLELPAPSGWTKKFFPKKSGTPKKNEIVFTSPTGDEIRTKRHLEKYLKTNGGPNISEFDWGTGETPRRSSRIVEKVKAAPPAEPKSEPPKKRSRKSSASKKEASEDEAEETKDVEMQEAGETKDDKDLEPEKEVVNENEDKKGAEDADVKESIRPGETTYIAKDEGKSNTADGDLQASKENIDDKGAEGSGVVQNKDVEKIGLPAEETKQEEKIGQPAEETKQEEKIGQPAEDTKQEEKIEQPVEETKQEEKIRQPVEETKQDGGSGEAEKSEAAPTAEKTAEVDGENKEEDDRITREAGGETKEKDATRVHDEANYKVHDMNKAESEVTVNGS*