Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202830 | XP_013463492.2 | 89.392 | 1282 | 54 | 7 | 1 | 1235 | 1 | 1247 | 0.0 | 2196 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202830 | sp|F4K5K6|PMIR1_ARATH | 54.232 | 697 | 267 | 16 | 551 | 1228 | 500 | 1163 | 0.0 | 609 |
Msa0202830 | sp|F4K5K6|PMIR1_ARATH | 50.000 | 354 | 153 | 6 | 10 | 357 | 3 | 338 | 5.09e-94 | 331 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202830 | A0A072V6S3 | 91.620 | 1241 | 51 | 8 | 1 | 1235 | 1 | 1194 | 0.0 | 2191 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003220 | Msa0202830 | 0.825030 | 5.853682e-54 | -8.615850e-47 |
Msa0003270 | Msa0202830 | 0.803118 | 4.060681e-49 | -8.615850e-47 |
Msa0008410 | Msa0202830 | 0.820220 | 7.695317e-53 | -8.615850e-47 |
Msa0010770 | Msa0202830 | 0.824248 | 8.946895e-54 | -8.615850e-47 |
Msa0027390 | Msa0202830 | 0.815231 | 1.027611e-51 | -8.615850e-47 |
Msa0039250 | Msa0202830 | 0.815600 | 8.505837e-52 | -8.615850e-47 |
Msa0070430 | Msa0202830 | 0.813163 | 2.941839e-51 | -8.615850e-47 |
Msa0096580 | Msa0202830 | 0.808288 | 3.333842e-50 | -8.615850e-47 |
Msa0108870 | Msa0202830 | 0.814444 | 1.535757e-51 | -8.615850e-47 |
Msa0117910 | Msa0202830 | 0.800331 | 1.515068e-48 | -8.615850e-47 |
Msa0133720 | Msa0202830 | 0.808502 | 3.000977e-50 | -8.615850e-47 |
Msa0133820 | Msa0202830 | 0.804400 | 2.199824e-49 | -8.615850e-47 |
Msa0144360 | Msa0202830 | 0.808307 | 3.303068e-50 | -8.615850e-47 |
Msa0144780 | Msa0202830 | 0.801348 | 9.392700e-49 | -8.615850e-47 |
Msa0165300 | Msa0202830 | 0.824529 | 7.684510e-54 | -8.615850e-47 |
Msa0166950 | Msa0202830 | 0.808042 | 3.760636e-50 | -8.615850e-47 |
Msa0193600 | Msa0202830 | 0.808658 | 2.779233e-50 | -8.615850e-47 |
Msa0202830 | Msa0210260 | 0.811918 | 5.505693e-51 | -8.615850e-47 |
Msa0202830 | Msa0239450 | 0.816202 | 6.245306e-52 | -8.615850e-47 |
Msa0202830 | Msa0267870 | 0.819228 | 1.296930e-52 | -8.615850e-47 |
Msa0202830 | Msa0273650 | 0.809311 | 2.015018e-50 | -8.615850e-47 |
Msa0202830 | Msa0310410 | 0.812405 | 4.310158e-51 | -8.615850e-47 |
Msa0202830 | Msa0318880 | 0.801643 | 8.173176e-49 | -8.615850e-47 |
Msa0202830 | Msa0321170 | 0.807806 | 4.222544e-50 | -8.615850e-47 |
Msa0202830 | Msa0322590 | 0.952681 | 1.432951e-110 | -8.615850e-47 |
Msa0202830 | Msa0337510 | 0.808196 | 3.487063e-50 | -8.615850e-47 |
Msa0202830 | Msa0343190 | 0.819390 | 1.190972e-52 | -8.615850e-47 |
Msa0202830 | Msa0365370 | 0.803883 | 2.818443e-49 | -8.615850e-47 |
Msa0202830 | Msa0394690 | 0.826330 | 2.878791e-54 | -8.615850e-47 |
Msa0202830 | Msa0413450 | 0.812178 | 4.832331e-51 | -8.615850e-47 |
Msa0202830 | Msa0428170 | 0.810763 | 9.806249e-51 | -8.615850e-47 |
Msa0202830 | Msa0431770 | 0.819785 | 9.680229e-53 | -8.615850e-47 |
Msa0202830 | Msa0480780 | 0.813884 | 2.042003e-51 | -8.615850e-47 |
Msa0202830 | Msa0498560 | 0.809196 | 2.132835e-50 | -8.615850e-47 |
Msa0202830 | Msa0515640 | 0.803364 | 3.612100e-49 | -8.615850e-47 |
Msa0202830 | Msa0549280 | 0.807581 | 4.712502e-50 | -8.615850e-47 |
Msa0202830 | Msa0573040 | 0.802227 | 6.199015e-49 | -8.615850e-47 |
Msa0202830 | Msa0606810 | 0.821242 | 4.479713e-53 | -8.615850e-47 |
Msa0202830 | Msa0618950 | 0.800847 | 1.189292e-48 | -8.615850e-47 |
Msa0202830 | Msa0620230 | 0.808697 | 2.726358e-50 | -8.615850e-47 |
Msa0202830 | Msa0645170 | 0.800131 | 1.664479e-48 | -8.615850e-47 |
Msa0202830 | Msa0652300 | 0.809215 | 2.112521e-50 | -8.615850e-47 |
Msa0202830 | Msa0652690 | 0.808330 | 3.266510e-50 | -8.615850e-47 |
Msa0202830 | Msa0658390 | 0.815077 | 1.111761e-51 | -8.615850e-47 |
Msa0202830 | Msa0659990 | 0.836548 | 8.774961e-57 | -8.615850e-47 |
Msa0202830 | Msa0675990 | 0.803541 | 3.319301e-49 | -8.615850e-47 |
Msa0202830 | Msa0687230 | 0.804954 | 1.685501e-49 | -8.615850e-47 |
Msa0202830 | Msa0687450 | 0.831777 | 1.377280e-55 | -8.615850e-47 |
Msa0202830 | Msa0697690 | 0.805345 | 1.396235e-49 | -8.615850e-47 |
Msa0202830 | Msa0697720 | 0.805248 | 1.463277e-49 | -8.615850e-47 |
Msa0202830 | Msa0702570 | 0.809651 | 1.703243e-50 | -8.615850e-47 |
Msa0202830 | Msa0703110 | 0.808702 | 2.720161e-50 | -8.615850e-47 |
Msa0202830 | Msa0705390 | 0.815730 | 7.958617e-52 | -8.615850e-47 |
Msa0202830 | Msa0734960 | 0.839748 | 1.316399e-57 | -8.615850e-47 |
Msa0202830 | Msa0756930 | 0.810156 | 1.326122e-50 | -8.615850e-47 |
Msa0202830 | Msa0814630 | -0.808783 | 2.613830e-50 | -8.615850e-47 |
Msa0202830 | Msa0828920 | 0.804060 | 2.589366e-49 | -8.615850e-47 |
Msa0202830 | Msa0836500 | 0.809201 | 2.127015e-50 | -8.615850e-47 |
Msa0202830 | Msa0855160 | -0.817190 | 3.750134e-52 | -8.615850e-47 |
Msa0202830 | Msa0869010 | 0.816119 | 6.518824e-52 | -8.615850e-47 |
Msa0202830 | Msa0869100 | 0.803376 | 3.590465e-49 | -8.615850e-47 |
Msa0202830 | Msa0880450 | 0.805755 | 1.145187e-49 | -8.615850e-47 |
Msa0202830 | Msa0888940 | 0.812262 | 4.632807e-51 | -8.615850e-47 |
Msa0202830 | Msa0898660 | 0.803076 | 4.141859e-49 | -8.615850e-47 |
Msa0202830 | Msa0943170 | 0.800225 | 1.592587e-48 | -8.615850e-47 |
Msa0202830 | Msa0944660 | 0.800123 | 1.670528e-48 | -8.615850e-47 |
Msa0202830 | Msa0945240 | 0.812890 | 3.376737e-51 | -8.615850e-47 |
Msa0202830 | Msa0967370 | 0.823338 | 1.461289e-53 | -8.615850e-47 |
Msa0202830 | Msa0969330 | 0.814875 | 1.232942e-51 | -8.615850e-47 |
Msa0202830 | Msa0980940 | 0.863941 | 1.737475e-64 | -8.615850e-47 |
Msa0202830 | Msa1004420 | 0.830773 | 2.430874e-55 | -8.615850e-47 |
Msa0202830 | Msa1010070 | 0.804247 | 2.367356e-49 | -8.615850e-47 |
Msa0202830 | Msa1044430 | 0.813268 | 2.790133e-51 | -8.615850e-47 |
Msa0202830 | Msa1051600 | 0.821138 | 4.734353e-53 | -8.615850e-47 |
Msa0202830 | Msa1113590 | 0.811690 | 6.170516e-51 | -8.615850e-47 |
Msa0202830 | Msa1174100 | 0.827815 | 1.270404e-54 | -8.615850e-47 |
Msa0202830 | Msa1201830 | 0.811392 | 7.165284e-51 | -8.615850e-47 |
Msa0202830 | Msa1224830 | 0.823550 | 1.303972e-53 | -8.615850e-47 |
Msa0202830 | Msa1227320 | 0.804007 | 2.656268e-49 | -8.615850e-47 |
Msa0202830 | Msa1279590 | 0.814132 | 1.799714e-51 | -8.615850e-47 |
Msa0202830 | Msa1280620 | 0.806205 | 9.212242e-50 | -8.615850e-47 |
Msa0202830 | Msa1294840 | 0.816837 | 4.500272e-52 | -8.615850e-47 |
Msa0202830 | Msa1297600 | 0.812695 | 3.725866e-51 | -8.615850e-47 |
Msa0202830 | Msa1299330 | 0.839413 | 1.608459e-57 | -8.615850e-47 |
Msa0202830 | Msa1306390 | 0.803936 | 2.748301e-49 | -8.615850e-47 |
Msa0202830 | Msa1320820 | 0.823515 | 1.328977e-53 | -8.615850e-47 |
Msa0202830 | Msa1356610 | 0.807530 | 4.832948e-50 | -8.615850e-47 |
Msa0202830 | Msa1372310 | 0.822657 | 2.106624e-53 | -8.615850e-47 |
Msa0202830 | Msa1415940 | 0.803128 | 4.041240e-49 | -8.615850e-47 |
Msa0202830 | Msa1424780 | 0.807801 | 4.231664e-50 | -8.615850e-47 |
Msa0202830 | Msa1463470 | 0.800157 | 1.644303e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202830 | MtrunA17_Chr2g0300211 | 91.620 | 1241 | 51 | 8 | 1 | 1235 | 1 | 1194 | 0.0 | 2191 |
Msa0202830 | MtrunA17_Chr4g0070741 | 58.897 | 798 | 295 | 15 | 446 | 1234 | 303 | 1076 | 0.0 | 846 |
Msa0202830 | MtrunA17_Chr4g0070741 | 48.322 | 447 | 145 | 7 | 19 | 464 | 10 | 371 | 2.92e-102 | 349 |
Msa0202830 | MtrunA17_Chr1g0150791 | 41.061 | 358 | 171 | 11 | 1 | 344 | 2 | 333 | 2.37e-61 | 229 |
Msa0202830 | MtrunA17_Chr6g0483131 | 35.329 | 167 | 105 | 1 | 81 | 244 | 113 | 279 | 3.54e-30 | 129 |
Msa0202830 | MtrunA17_Chr6g0483131 | 30.928 | 194 | 112 | 6 | 745 | 929 | 514 | 694 | 2.41e-18 | 91.3 |
Msa0202830 | MtrunA17_Chr8g0392621 | 34.463 | 177 | 110 | 3 | 70 | 243 | 120 | 293 | 4.54e-28 | 122 |
Msa0202830 | MtrunA17_Chr8g0392621 | 23.975 | 488 | 227 | 17 | 745 | 1221 | 535 | 889 | 8.74e-23 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202830 | AT5G20610.1 | 54.232 | 697 | 267 | 16 | 551 | 1228 | 500 | 1163 | 0.0 | 609 |
Msa0202830 | AT5G20610.1 | 50.000 | 354 | 153 | 6 | 10 | 357 | 3 | 338 | 5.17e-95 | 331 |
Msa0202830 | AT5G26160.2 | 34.970 | 672 | 317 | 16 | 571 | 1235 | 418 | 976 | 2.18e-85 | 300 |
Msa0202830 | AT5G26160.2 | 41.745 | 321 | 136 | 9 | 21 | 335 | 17 | 292 | 3.50e-60 | 225 |
Msa0202830 | AT5G26160.1 | 34.970 | 672 | 317 | 16 | 571 | 1235 | 418 | 976 | 2.18e-85 | 300 |
Msa0202830 | AT5G26160.1 | 41.745 | 321 | 136 | 9 | 21 | 335 | 17 | 292 | 3.50e-60 | 225 |
Msa0202830 | AT5G26160.3 | 35.580 | 638 | 294 | 15 | 571 | 1204 | 418 | 942 | 1.02e-84 | 298 |
Msa0202830 | AT5G26160.3 | 41.745 | 321 | 136 | 9 | 21 | 335 | 17 | 292 | 2.49e-60 | 225 |
Msa0202830 | AT1G42550.1 | 31.280 | 211 | 130 | 6 | 77 | 282 | 114 | 314 | 7.37e-26 | 115 |
Msa0202830 | AT1G42550.1 | 28.185 | 259 | 165 | 8 | 680 | 934 | 461 | 702 | 1.09e-15 | 83.2 |
Find 320 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTATACTTGTTCGGTTTA+TGG | 0.150358 | 2_1:+25675228 | Msa0202830:CDS |
CATCTGGCTTATCTGTTTCT+AGG | 0.188004 | 2_1:-25675989 | None:intergenic |
CAATTTCACAGTAGCGTTAA+TGG | 0.213500 | 2_1:+25678040 | Msa0202830:CDS |
CAGTGCGCCGGAGCTTGATT+TGG | 0.216747 | 2_1:+25675320 | Msa0202830:CDS |
CAAACCCCATTGACGCATTA+AGG | 0.220008 | 2_1:-25676888 | None:intergenic |
AAGAAGAGTAGTGGGGTTTC+TGG | 0.221014 | 2_1:+25674793 | Msa0202830:CDS |
GAAGAGGAGGGACGGGGTTT+TGG | 0.224303 | 2_1:+25675152 | Msa0202830:CDS |
ATATGTGGATTTAGTGTTTC+CGG | 0.229953 | 2_1:-25678542 | None:intergenic |
AGCATTTCTTCACGCATATT+TGG | 0.237343 | 2_1:+25678506 | Msa0202830:CDS |
TACAATTAAACCTCTTATTT+CGG | 0.258098 | 2_1:-25675056 | None:intergenic |
GGAAGTGGACTACAAGTTTC+AGG | 0.258749 | 2_1:+25675415 | Msa0202830:CDS |
TCATTATCTTGACGGTCTTC+AGG | 0.265075 | 2_1:-25676044 | None:intergenic |
GATTTGAATTCTGCAACTTT+AGG | 0.275043 | 2_1:-25676482 | None:intergenic |
TTGCAGCATGATTCAATAAT+AGG | 0.275473 | 2_1:+25677459 | Msa0202830:CDS |
CGAATTTGAATTGAAATTGC+TGG | 0.276086 | 2_1:-25677541 | None:intergenic |
TAACCTTTCTGTTCCTTCTA+AGG | 0.279800 | 2_1:-25677290 | None:intergenic |
AATGACTCCTCTACTTTAAC+AGG | 0.280432 | 2_1:-25676110 | None:intergenic |
GGCTCAAATGCTAGAAGATT+TGG | 0.286989 | 2_1:+25676856 | Msa0202830:CDS |
AGTGCGCCGGAGCTTGATTT+GGG | 0.292250 | 2_1:+25675321 | Msa0202830:CDS |
AATCCGAGCCTGCTGGACTA+TGG | 0.310295 | 2_1:-25676589 | None:intergenic |
CCGAAACCGGTACAATCTTT+TGG | 0.312560 | 2_1:-25676938 | None:intergenic |
TCATTTGGTATAATGACATT+AGG | 0.313235 | 2_1:-25678572 | None:intergenic |
CCAAAAGATTGTACCGGTTT+CGG | 0.315466 | 2_1:+25676938 | Msa0202830:CDS |
AACAAAATAAATCAATTTCT+AGG | 0.316925 | 2_1:-25678674 | None:intergenic |
GCAATAAAATGTTTGTTTCC+AGG | 0.323168 | 2_1:+25678933 | Msa0202830:three_prime_UTR |
GCCTCCTCTTGCCGAGGGGT+TGG | 0.325484 | 2_1:+25677000 | Msa0202830:CDS |
CCTCCTCTTGCCGAGGGGTT+GGG | 0.326250 | 2_1:+25677001 | Msa0202830:CDS |
TCACGCTGGTTGCTTGCTAA+TGG | 0.341702 | 2_1:+25678377 | Msa0202830:CDS |
TCATGAAATGCATCAAGTTC+AGG | 0.346697 | 2_1:-25675963 | None:intergenic |
CAGCAATTTCAATTCAAATT+CGG | 0.348752 | 2_1:+25677542 | Msa0202830:CDS |
CTTCCTTTACCCCTCGGTTT+CGG | 0.348818 | 2_1:-25674949 | None:intergenic |
ATATCAGATGCATGCACTTC+AGG | 0.349982 | 2_1:-25675876 | None:intergenic |
TACAAAGAGGATGAATCTTC+TGG | 0.350124 | 2_1:+25676287 | Msa0202830:CDS |
TCGTTAACTGCATGCACTTC+AGG | 0.350509 | 2_1:-25675912 | None:intergenic |
CATTTGGTATAATGACATTA+GGG | 0.352561 | 2_1:-25678571 | None:intergenic |
GACTACAAGTTTCAGGTTAT+CGG | 0.359817 | 2_1:+25675422 | Msa0202830:CDS |
TTACCCCTCGGTTTCGGATC+AGG | 0.364182 | 2_1:-25674943 | None:intergenic |
AACTGTCTTTGTTTAACATC+TGG | 0.365532 | 2_1:-25675579 | None:intergenic |
ATTTCTGCAGGTACAACAAC+AGG | 0.370298 | 2_1:-25677127 | None:intergenic |
TAGTCAGAAGAAATTGTTAA+AGG | 0.372724 | 2_1:+25674816 | Msa0202830:CDS |
GTATATCCATCTGGTTTGAT+TGG | 0.377018 | 2_1:-25675828 | None:intergenic |
CGGAGGCTATCTACGATCTA+TGG | 0.378525 | 2_1:+25677045 | Msa0202830:CDS |
TGTTGTTGTACCTGCAGAAA+TGG | 0.384066 | 2_1:+25677129 | Msa0202830:CDS |
TCTTCAGGTGGTAATTGAAT+TGG | 0.384371 | 2_1:-25676965 | None:intergenic |
CTCGGCATGGAAGGGGCTGC+TGG | 0.385370 | 2_1:+25677765 | Msa0202830:CDS |
ATAAAAGGTCTATATGGAAT+TGG | 0.387277 | 2_1:+25675007 | Msa0202830:CDS |
GGCAACGTAGGAAGCTCTTC+AGG | 0.390479 | 2_1:-25676980 | None:intergenic |
TCAACACATTAGGAGCATTA+TGG | 0.391837 | 2_1:-25675524 | None:intergenic |
GCCGTGATGAATGTCAGTTT+TGG | 0.394511 | 2_1:+25675459 | Msa0202830:CDS |
GTACCTGCAGAAATGGGTTC+CGG | 0.395115 | 2_1:+25677136 | Msa0202830:CDS |
TCTGCACTAGCCAGCTCAAT+AGG | 0.396238 | 2_1:+25675717 | Msa0202830:CDS |
AGGAGAAGAGCTCGGGGAAG+TGG | 0.397672 | 2_1:+25675400 | Msa0202830:CDS |
GTTAAACAAAGACAGTTTGA+TGG | 0.401336 | 2_1:+25675585 | Msa0202830:CDS |
ACATTAGGGTTTCTTATATG+TGG | 0.401929 | 2_1:-25678557 | None:intergenic |
AGAAATGGGTTCCGGGATAA+TGG | 0.405626 | 2_1:+25677144 | Msa0202830:CDS |
CGGTGTCTGGTTCGAATTCG+AGG | 0.406241 | 2_1:+25674893 | Msa0202830:CDS |
CTCCTAATGTGTTGACTTCG+AGG | 0.406506 | 2_1:+25675532 | Msa0202830:CDS |
CACAACCTGCTGCCACTTTG+TGG | 0.407045 | 2_1:+25678483 | Msa0202830:CDS |
ACATTGTTGCACAATCCATT+GGG | 0.409085 | 2_1:+25677697 | Msa0202830:CDS |
GATTAAACTCCCACTAGCTT+TGG | 0.409557 | 2_1:-25677089 | None:intergenic |
GGTTGTGCCTTTGTGGTAAC+CGG | 0.409772 | 2_1:-25678467 | None:intergenic |
AGCAGTGATGTTGGTGTTGA+TGG | 0.409955 | 2_1:+25677813 | Msa0202830:CDS |
GGCTGCTGGTTTGCAGCTGA+TGG | 0.412711 | 2_1:+25677779 | Msa0202830:CDS |
CTAAGTCTATTAGTGTCATT+TGG | 0.413102 | 2_1:-25678587 | None:intergenic |
GAGTGGATGAAGCTGGATTC+TGG | 0.413959 | 2_1:+25677864 | Msa0202830:CDS |
CAATAAAATGTTTGTTTCCA+GGG | 0.420836 | 2_1:+25678934 | Msa0202830:three_prime_UTR |
TTTGAGAAGGAAGCCCTAGA+TGG | 0.421853 | 2_1:+25676656 | Msa0202830:CDS |
AGAAAATGCGTGCAGCTCTC+TGG | 0.422171 | 2_1:+25675764 | Msa0202830:CDS |
GAAGCTATGCCTGCCTTAGA+AGG | 0.422956 | 2_1:+25677277 | Msa0202830:CDS |
CTCGAACCATCAAAAGTAGA+AGG | 0.423426 | 2_1:-25675114 | None:intergenic |
AGAAGGATAAAAGGTCTATA+TGG | 0.423606 | 2_1:+25675001 | Msa0202830:CDS |
CAGAAGCCTTAATGCGTCAA+TGG | 0.424767 | 2_1:+25676882 | Msa0202830:CDS |
CTTCATGTACATTTGATTGA+AGG | 0.424825 | 2_1:+25675087 | Msa0202830:CDS |
TAGAAGTGCTTCGAGGAATT+CGG | 0.426780 | 2_1:+25674873 | Msa0202830:CDS |
GAAGTTGACTTATACTTGTT+CGG | 0.427532 | 2_1:+25675221 | Msa0202830:CDS |
GCTTCGAGGAATTCGGTGTC+TGG | 0.427810 | 2_1:+25674880 | Msa0202830:CDS |
AGAAGCCTTAATGCGTCAAT+GGG | 0.432208 | 2_1:+25676883 | Msa0202830:CDS |
TTGAAAGGAACACCACCATC+TGG | 0.432249 | 2_1:+25677510 | Msa0202830:CDS |
TACCTGCAGAAATGGGTTCC+GGG | 0.433085 | 2_1:+25677137 | Msa0202830:CDS |
GGAGTTCAAAGGGAGGAGTT+AGG | 0.433362 | 2_1:+25677973 | Msa0202830:CDS |
AACATTGTTGCACAATCCAT+TGG | 0.433367 | 2_1:+25677696 | Msa0202830:CDS |
GAACATGATGTTGTCGAGAA+TGG | 0.433461 | 2_1:+25674762 | Msa0202830:intron |
TTCATGTACATTTGATTGAA+GGG | 0.434546 | 2_1:+25675088 | Msa0202830:CDS |
ATATTTGCAAATGCAAACTT+AGG | 0.435196 | 2_1:+25678886 | Msa0202830:three_prime_UTR |
TTGGTATTCTTGAAAATTGA+GGG | 0.436431 | 2_1:-25677070 | None:intergenic |
CAAATATATAATTTACCTGA+TGG | 0.441158 | 2_1:-25678870 | None:intergenic |
TTGAATTGGACTTCCGAAAC+CGG | 0.441219 | 2_1:-25676951 | None:intergenic |
GAGGTTGCTTCCTCTCACTT+TGG | 0.442211 | 2_1:+25675365 | Msa0202830:CDS |
CAGGTTATCGGGAAAGGCTA+AGG | 0.445056 | 2_1:+25675434 | Msa0202830:CDS |
CATTATCTTGACGGTCTTCA+GGG | 0.446875 | 2_1:-25676043 | None:intergenic |
TTCAAGAATACCAAAGCTAG+TGG | 0.449697 | 2_1:+25677079 | Msa0202830:CDS |
TTTCGCATATCCGAAATAAG+AGG | 0.450279 | 2_1:+25675046 | Msa0202830:CDS |
CTTTGATGATGTTACAGAAT+CGG | 0.451114 | 2_1:+25676532 | Msa0202830:CDS |
CTTGAGGAGGAGAAGAGCTC+GGG | 0.451845 | 2_1:+25675393 | Msa0202830:CDS |
GGCAAAGGCATTGATATTAA+CGG | 0.456540 | 2_1:+25677738 | Msa0202830:CDS |
GCAGGCTTAAAAGTATCTTC+TGG | 0.456549 | 2_1:+25676188 | Msa0202830:CDS |
GGCAGCAGGTTGTGCCTTTG+TGG | 0.458236 | 2_1:-25678474 | None:intergenic |
CTTTCTGTTCCTTCTAAGGC+AGG | 0.458559 | 2_1:-25677286 | None:intergenic |
ATGGTTTGCAGAAGGATAAA+AGG | 0.458887 | 2_1:+25674992 | Msa0202830:CDS |
TGGTTGCTTGCTAATGGAAT+GGG | 0.460077 | 2_1:+25678383 | Msa0202830:CDS |
TGAGTACCTGGTAAAGAGAA+AGG | 0.461057 | 2_1:-25674411 | None:intergenic |
GCAAGCATTGGTGTTCCAAC+TGG | 0.461912 | 2_1:-25678095 | None:intergenic |
GATGGCTATGATGCTTCTAA+TGG | 0.463402 | 2_1:+25676728 | Msa0202830:CDS |
GATGCTCCTTCTGAAGGTCT+TGG | 0.463583 | 2_1:-25676799 | None:intergenic |
TCTCACTTTGGAGGAGCTTG+AGG | 0.465573 | 2_1:+25675377 | Msa0202830:CDS |
TCACACCTTGCAATTATTGA+AGG | 0.467249 | 2_1:-25678722 | None:intergenic |
TTTGGTGACTCGTCCGGCTA+AGG | 0.470886 | 2_1:+25675170 | Msa0202830:CDS |
TCAAGTAAAAGGCAGCCATC+TGG | 0.472950 | 2_1:-25676005 | None:intergenic |
AATTGAAGATCTTGCACCGT+TGG | 0.473342 | 2_1:+25677596 | Msa0202830:CDS |
AACGGCTCCCTCGGCATGGA+AGG | 0.473769 | 2_1:+25677756 | Msa0202830:CDS |
ACCTCGACGCAGCAACAATC+TGG | 0.474072 | 2_1:+25678353 | Msa0202830:CDS |
TGCCTCGAAGTCAACACATT+AGG | 0.474277 | 2_1:-25675534 | None:intergenic |
CTTGTTCGGTTTATGGAAGT+AGG | 0.476128 | 2_1:+25675235 | Msa0202830:CDS |
TGGAAGCAGCAGCATGAGGC+GGG | 0.476172 | 2_1:+25675605 | Msa0202830:CDS |
TGTATTGGAAGAGGAGGGAC+GGG | 0.477781 | 2_1:+25675145 | Msa0202830:CDS |
CTGGTTGCTTGCTAATGGAA+TGG | 0.477881 | 2_1:+25678382 | Msa0202830:CDS |
GATCCGAAACCGAGGGGTAA+AGG | 0.477971 | 2_1:+25674946 | Msa0202830:CDS |
AGGAGACGAGGCAAAGGCTC+CGG | 0.478503 | 2_1:+25677993 | Msa0202830:CDS |
AGCAGCAGCATGAGGCGGGC+CGG | 0.479074 | 2_1:+25675609 | Msa0202830:CDS |
CGGCTCCCTCGGCATGGAAG+GGG | 0.479079 | 2_1:+25677758 | Msa0202830:CDS |
CTCGTCTCAAGCTGCGGAAG+AGG | 0.479142 | 2_1:+25675659 | Msa0202830:CDS |
GAGCGAAATAGTAGCAAAGA+TGG | 0.479789 | 2_1:+25678214 | Msa0202830:CDS |
CTATTACTTCCTTTACCCCT+CGG | 0.479915 | 2_1:-25674955 | None:intergenic |
GTTGCTTCCTCTCACTTTGG+AGG | 0.482124 | 2_1:+25675368 | Msa0202830:CDS |
CAAAATCGAAGCACTTTCAA+TGG | 0.485047 | 2_1:+25677626 | Msa0202830:CDS |
TTTGGTATTCTTGAAAATTG+AGG | 0.485979 | 2_1:-25677071 | None:intergenic |
GATTGTGCAACAATGTTAGA+TGG | 0.486818 | 2_1:-25677690 | None:intergenic |
GTTGTTGTACCTGCAGAAAT+GGG | 0.488384 | 2_1:+25677130 | Msa0202830:CDS |
TAGTGTGTGCATATTCCATC+AGG | 0.488509 | 2_1:+25678855 | Msa0202830:three_prime_UTR |
TCGAATTCGAGGTCTAAAAC+TGG | 0.489299 | 2_1:+25674904 | Msa0202830:CDS |
TTGCTTCATACTTCGCAGAA+TGG | 0.489554 | 2_1:-25675269 | None:intergenic |
ACGTTGCCTCCTCTTGCCGA+GGG | 0.492415 | 2_1:+25676995 | Msa0202830:CDS |
ATAAATCAATTTCTAGGCAC+AGG | 0.493083 | 2_1:-25678668 | None:intergenic |
ACTACAAGTTTCAGGTTATC+GGG | 0.493096 | 2_1:+25675423 | Msa0202830:CDS |
TTATTCCCTTTCTCTTTACC+AGG | 0.493628 | 2_1:+25674405 | Msa0202830:five_prime_UTR |
AAGAGAAAGGGAATAAGCTT+AGG | 0.494553 | 2_1:-25674398 | None:intergenic |
CAGAGCTGACATTTCCCCAA+TGG | 0.494809 | 2_1:-25677712 | None:intergenic |
GGGCCCAACCCCTCGGCAAG+AGG | 0.494969 | 2_1:-25677004 | None:intergenic |
TAGTGGGAGTTTAATCATGC+AGG | 0.496365 | 2_1:+25677096 | Msa0202830:CDS |
TACGTTGCCTCCTCTTGCCG+AGG | 0.497116 | 2_1:+25676994 | Msa0202830:CDS |
ATGGAATTGGAGACCGTTGA+AGG | 0.498268 | 2_1:+25675020 | Msa0202830:CDS |
TTACAGTGTTTGGCTTCAGT+TGG | 0.498327 | 2_1:+25677172 | Msa0202830:CDS |
AGCCCATAGTCCAGCAGGCT+CGG | 0.500368 | 2_1:+25676586 | Msa0202830:CDS |
AGTACATGACATAAATAAAA+CGG | 0.501058 | 2_1:-25678817 | None:intergenic |
GAGGGATTGAGAATACAATC+TGG | 0.501547 | 2_1:+25677648 | Msa0202830:CDS |
AACTCTTTCGACTTTATCCG+TGG | 0.502597 | 2_1:+25677951 | Msa0202830:CDS |
ATCCGAGCCTGCTGGACTAT+GGG | 0.503922 | 2_1:-25676588 | None:intergenic |
ATCCCGGAACCCATTTCTGC+AGG | 0.504024 | 2_1:-25677139 | None:intergenic |
ATTTGGAAAAGCGAAAGAAC+CGG | 0.506092 | 2_1:+25678523 | Msa0202830:CDS |
TCAAGCTGCGGAAGAGGTAA+AGG | 0.506259 | 2_1:+25675665 | Msa0202830:CDS |
TGTTAGAGCATCAATCAAGT+TGG | 0.506281 | 2_1:+25678693 | Msa0202830:three_prime_UTR |
TTTATCCGTGGGAGTTCAAA+GGG | 0.507523 | 2_1:+25677963 | Msa0202830:CDS |
GGCAAAGGAGTTAATGCCAC+TGG | 0.511777 | 2_1:+25677216 | Msa0202830:CDS |
GTCGAAAGAGTTAGCATGAT+GGG | 0.512946 | 2_1:-25677940 | None:intergenic |
CTTTATCCGTGGGAGTTCAA+AGG | 0.513069 | 2_1:+25677962 | Msa0202830:CDS |
ACACACTGAACCACCTTAGC+CGG | 0.513179 | 2_1:-25675183 | None:intergenic |
CCCAACCCCTCGGCAAGAGG+AGG | 0.513544 | 2_1:-25677001 | None:intergenic |
ACGGCTCCCTCGGCATGGAA+GGG | 0.513641 | 2_1:+25677757 | Msa0202830:CDS |
ATCGAAGCACTTTCAATGGA+GGG | 0.515706 | 2_1:+25677630 | Msa0202830:CDS |
TTGAGAAGGAAGCCCTAGAT+GGG | 0.516019 | 2_1:+25676657 | Msa0202830:CDS |
TGCAGGTACAACAACAGGGT+TGG | 0.516777 | 2_1:-25677122 | None:intergenic |
TATGAATAAAGCTATGTACT+TGG | 0.518447 | 2_1:+25674849 | Msa0202830:CDS |
TCAGAGGAAGTATATCCATC+TGG | 0.518530 | 2_1:-25675837 | None:intergenic |
AATAGTAATGATGATAATGA+TGG | 0.518672 | 2_1:+25674973 | Msa0202830:CDS |
AACACCAGCGCGGCAAAAGA+TGG | 0.519605 | 2_1:+25675501 | Msa0202830:CDS |
CTTCTGAAGGTCTTGGAACA+AGG | 0.522914 | 2_1:-25676792 | None:intergenic |
AGTTCAGGTGTGTCAAGCAC+TGG | 0.525135 | 2_1:-25675948 | None:intergenic |
AAAGTGGTAAGAAGAGTAGT+GGG | 0.525318 | 2_1:+25674785 | Msa0202830:CDS |
GACACAGCCCATAGTCCAGC+AGG | 0.526823 | 2_1:+25676581 | Msa0202830:CDS |
ATGCTCCACAAAGTGGCAGC+AGG | 0.527916 | 2_1:-25678488 | None:intergenic |
GTTATTAGAGAGAACAACAT+AGG | 0.528161 | 2_1:+25678751 | Msa0202830:three_prime_UTR |
AAGTTTCAGGTTATCGGGAA+AGG | 0.529464 | 2_1:+25675428 | Msa0202830:CDS |
TCTTGATGAGTGGATGAAGC+TGG | 0.530315 | 2_1:+25677857 | Msa0202830:CDS |
TGCTTCGCTTCTCAGTGCGC+CGG | 0.533163 | 2_1:+25675308 | Msa0202830:CDS |
ATTGATATTAACGGCTCCCT+CGG | 0.534760 | 2_1:+25677747 | Msa0202830:CDS |
CACTTTGGAGGAGCTTGAGG+AGG | 0.535429 | 2_1:+25675380 | Msa0202830:CDS |
CAATTTCAATTCAAATTCGG+TGG | 0.536167 | 2_1:+25677545 | Msa0202830:CDS |
ATATAAGACGCCTATTGAGC+TGG | 0.536219 | 2_1:-25675727 | None:intergenic |
AGAAGCTCTCTCGGAGACTC+CGG | 0.538225 | 2_1:-25676623 | None:intergenic |
AGATGTGAGGGGAAAACAAA+GGG | 0.540666 | 2_1:+25676835 | Msa0202830:CDS |
GAGTACCTGGTAAAGAGAAA+GGG | 0.540736 | 2_1:-25674410 | None:intergenic |
GATACACAATTCTCTTGATG+AGG | 0.540957 | 2_1:+25676220 | Msa0202830:CDS |
TCTCTTGATGAGGCAAATGA+TGG | 0.541036 | 2_1:+25676329 | Msa0202830:CDS |
TCTCTTGATGAGGCAAATGA+TGG | 0.541741 | 2_1:+25676230 | Msa0202830:CDS |
GACAATACAACAAGTAGCAT+GGG | 0.542723 | 2_1:+25677255 | Msa0202830:CDS |
TGTCTTAAGAGAAGCTCTCT+CGG | 0.543137 | 2_1:-25676632 | None:intergenic |
GGAGTTAGGAGACGAGGCAA+AGG | 0.545122 | 2_1:+25677987 | Msa0202830:CDS |
ATGCCACTGGAAGATATCAC+GGG | 0.545959 | 2_1:+25677229 | Msa0202830:CDS |
CTGTAAAACTTCCATTATCC+CGG | 0.546253 | 2_1:-25677155 | None:intergenic |
ATTACTGAAGTTCATGTGGC+AGG | 0.548786 | 2_1:+25678293 | Msa0202830:CDS |
TGAGGCAAATGATGGTTGTA+AGG | 0.551776 | 2_1:+25676238 | Msa0202830:CDS |
TGAGGCAAATGATGGTTGTA+AGG | 0.551776 | 2_1:+25676337 | Msa0202830:CDS |
GAAAGTGGTAAGAAGAGTAG+TGG | 0.551882 | 2_1:+25674784 | Msa0202830:CDS |
GGCAGAAAATGCGGTTTGCT+AGG | 0.552629 | 2_1:+25678014 | Msa0202830:CDS |
TGCATCTAAATCGATTGCTC+CGG | 0.552829 | 2_1:+25678448 | Msa0202830:CDS |
GTCGTCGTTGTTACGTAACT+CGG | 0.553278 | 2_1:-25678177 | None:intergenic |
GGTGACTCGTCCGGCTAAGG+TGG | 0.554227 | 2_1:+25675173 | Msa0202830:CDS |
GCTTGAGGAGGAGAAGAGCT+CGG | 0.554372 | 2_1:+25675392 | Msa0202830:CDS |
GATGGAGGACGCAAATAAAG+AGG | 0.558631 | 2_1:+25678232 | Msa0202830:CDS |
ATGGAAGCAGCAGCATGAGG+CGG | 0.558667 | 2_1:+25675604 | Msa0202830:CDS |
GAGCATCAATCAAGTTGGAC+TGG | 0.560186 | 2_1:+25678698 | Msa0202830:three_prime_UTR |
CTGAGAAATTATGAGCCAGT+TGG | 0.560904 | 2_1:+25678080 | Msa0202830:CDS |
CAGCAGCCCCTTCCATGCCG+AGG | 0.562328 | 2_1:-25677764 | None:intergenic |
CGTTGAGTCTCAAGATGTGA+GGG | 0.562424 | 2_1:+25676823 | Msa0202830:CDS |
TCTCCACCAAAAGATTGTAC+CGG | 0.562872 | 2_1:+25676932 | Msa0202830:CDS |
CAACGAGATGCTCCTTCTGA+AGG | 0.563860 | 2_1:-25676805 | None:intergenic |
TTTGCGCAAAAGGACTTGAA+AGG | 0.564516 | 2_1:+25677495 | Msa0202830:CDS |
GTGTATTGGAAGAGGAGGGA+CGG | 0.565756 | 2_1:+25675144 | Msa0202830:CDS |
CATAATTTCTCAGAGGATCA+CGG | 0.567774 | 2_1:-25678070 | None:intergenic |
AGCAGCCCCTTCCATGCCGA+GGG | 0.568036 | 2_1:-25677763 | None:intergenic |
AAACTTAGGTTGCAAACTTG+TGG | 0.568164 | 2_1:+25678900 | Msa0202830:three_prime_UTR |
GATACACGATTCTCTTGATG+AGG | 0.568964 | 2_1:+25676319 | Msa0202830:CDS |
CTCGAGCCAATCAAACCAGA+TGG | 0.570830 | 2_1:+25675822 | Msa0202830:CDS |
TGTGAGGATGAAGCTGATGA+TGG | 0.571431 | 2_1:+25676710 | Msa0202830:CDS |
AGGTTATCGGGAAAGGCTAA+GGG | 0.571817 | 2_1:+25675435 | Msa0202830:CDS |
GCTAGTGCAGACTTAGACGA+TGG | 0.571929 | 2_1:-25675705 | None:intergenic |
CACTAATAGACTTAGTTGAC+TGG | 0.572724 | 2_1:+25678595 | Msa0202830:exon |
ATGTCAGCTCTGCAAGGCAA+AGG | 0.573262 | 2_1:+25677723 | Msa0202830:CDS |
AAGAAAAGGGCCCAACCCCT+CGG | 0.573547 | 2_1:-25677011 | None:intergenic |
TGTTTCCCCAAATCAAGCTC+CGG | 0.574726 | 2_1:-25675327 | None:intergenic |
TCGGTTTATGGAAGTAGGAG+TGG | 0.575273 | 2_1:+25675240 | Msa0202830:CDS |
AAAACTCTCAATGCAGGCAA+AGG | 0.577233 | 2_1:+25677201 | Msa0202830:CDS |
AAACTCTGAGCCTGTGTGGT+TGG | 0.577806 | 2_1:-25677568 | None:intergenic |
CTCCTCCCTTTGAACTCCCA+CGG | 0.579192 | 2_1:-25677968 | None:intergenic |
AGATTCATCCTCTTTGTAAG+CGG | 0.579266 | 2_1:-25676282 | None:intergenic |
CTTCTAATGGCTCTGAGCAG+TGG | 0.579741 | 2_1:+25676741 | Msa0202830:CDS |
AGACAATACAACAAGTAGCA+TGG | 0.580507 | 2_1:+25677254 | Msa0202830:CDS |
CTCGGATTCTGAAAACGAGC+CGG | 0.580766 | 2_1:+25676604 | Msa0202830:CDS |
TATTAACGGCTCCCTCGGCA+TGG | 0.583903 | 2_1:+25677752 | Msa0202830:CDS |
GTTAGATGGTGCATCCTCCT+CGG | 0.584673 | 2_1:-25677676 | None:intergenic |
TTTCGGTGTATTGGAAGAGG+AGG | 0.584811 | 2_1:+25675139 | Msa0202830:CDS |
AATGCCACTGGAAGATATCA+CGG | 0.585124 | 2_1:+25677228 | Msa0202830:CDS |
TTCGGTGTATTGGAAGAGGA+GGG | 0.585819 | 2_1:+25675140 | Msa0202830:CDS |
ACTTCAGTAATCTTGAACTG+AGG | 0.588259 | 2_1:-25678281 | None:intergenic |
GTATTGGAAGAGGAGGGACG+GGG | 0.588897 | 2_1:+25675146 | Msa0202830:CDS |
TCTCTTAAGACAGTTTGAGA+AGG | 0.590467 | 2_1:+25676643 | Msa0202830:CDS |
AGTAGAGGAGTCATTCTCAA+AGG | 0.591086 | 2_1:+25676118 | Msa0202830:CDS |
GTGCGCCGGAGCTTGATTTG+GGG | 0.592524 | 2_1:+25675322 | Msa0202830:CDS |
CAAGATTACTGAAGTTCATG+TGG | 0.593112 | 2_1:+25678289 | Msa0202830:CDS |
TTGCTGGACTTCAGTCCAGA+TGG | 0.596304 | 2_1:-25677525 | None:intergenic |
GGCTAAGGTGGTTCAGTGTG+TGG | 0.597990 | 2_1:+25675185 | Msa0202830:CDS |
AATCGAAGCACTTTCAATGG+AGG | 0.598982 | 2_1:+25677629 | Msa0202830:CDS |
GTTTCCTGATCCGAAACCGA+GGG | 0.600020 | 2_1:+25674939 | Msa0202830:CDS |
AATTGAACCTGTTAAAGTAG+AGG | 0.600835 | 2_1:+25676103 | Msa0202830:CDS |
AGGGATTGAGAATACAATCT+GGG | 0.601300 | 2_1:+25677649 | Msa0202830:CDS |
GCAGTGATGTTGGTGTTGAT+GGG | 0.605197 | 2_1:+25677814 | Msa0202830:CDS |
TCGTTGAGTCTCAAGATGTG+AGG | 0.609176 | 2_1:+25676822 | Msa0202830:CDS |
CAACGACGACAAGGATGATG+AGG | 0.609371 | 2_1:+25678190 | Msa0202830:CDS |
AATTCGAGGTCTAAAACTGG+TGG | 0.609457 | 2_1:+25674907 | Msa0202830:CDS |
GTTACGTAACAACGACGACA+AGG | 0.611328 | 2_1:+25678181 | Msa0202830:CDS |
TAATTGCAAGGTGTGAAACA+TGG | 0.613174 | 2_1:+25678729 | Msa0202830:three_prime_UTR |
TGTTTCCTGATCCGAAACCG+AGG | 0.613767 | 2_1:+25674938 | Msa0202830:CDS |
TATCGTTAACTCTTGATGAG+TGG | 0.614675 | 2_1:+25677847 | Msa0202830:CDS |
ACTTGGATAGAAGTGCTTCG+AGG | 0.614815 | 2_1:+25674866 | Msa0202830:CDS |
GTAAAAGACAGCAGTGATGT+TGG | 0.616788 | 2_1:+25677804 | Msa0202830:CDS |
AGTCGAAAGAGTTAGCATGA+TGG | 0.618219 | 2_1:-25677941 | None:intergenic |
ATATGCGAAAGCGCCTTCAA+CGG | 0.618787 | 2_1:-25675033 | None:intergenic |
CTGGTCCTTCAATAATTGCA+AGG | 0.619225 | 2_1:+25678717 | Msa0202830:three_prime_UTR |
AATTCGGTGGCCAACCACAC+AGG | 0.620829 | 2_1:+25677558 | Msa0202830:CDS |
TGAAGAAATGCTCCACAAAG+TGG | 0.621625 | 2_1:-25678495 | None:intergenic |
TCGGTACTCGTCTCAAGCTG+CGG | 0.623823 | 2_1:+25675653 | Msa0202830:CDS |
GATTGCTCCGGTTACCACAA+AGG | 0.623858 | 2_1:+25678460 | Msa0202830:CDS |
TCAAGCTCCTCCAAAGTGAG+AGG | 0.624558 | 2_1:-25675375 | None:intergenic |
GAGCAGTGGAATTTCTCTGA+GGG | 0.624989 | 2_1:+25676755 | Msa0202830:CDS |
ACTCATCAAGAGTTAACGAT+AGG | 0.625250 | 2_1:-25677845 | None:intergenic |
TCAAGAATACCAAAGCTAGT+GGG | 0.626934 | 2_1:+25677080 | Msa0202830:CDS |
AAAGGCTCCGGCAGAAAATG+CGG | 0.629934 | 2_1:+25678005 | Msa0202830:CDS |
CTTGTTCCAAGACCTTCAGA+AGG | 0.630450 | 2_1:+25676793 | Msa0202830:CDS |
CGAAATAGTAGCAAAGATGG+AGG | 0.635235 | 2_1:+25678217 | Msa0202830:CDS |
TTGATGGAAGCAGCAGCATG+AGG | 0.635239 | 2_1:+25675601 | Msa0202830:CDS |
GAGAAGGAAGCCCTAGATGG+GGG | 0.637335 | 2_1:+25676659 | Msa0202830:CDS |
TTGAGGAGGAGAAGAGCTCG+GGG | 0.637637 | 2_1:+25675394 | Msa0202830:CDS |
ACTCTTTCGACTTTATCCGT+GGG | 0.637876 | 2_1:+25677952 | Msa0202830:CDS |
CTAGAAACAGATAAGCCAGA+TGG | 0.638143 | 2_1:+25675990 | Msa0202830:CDS |
CTGCCTTAGAAGGAACAGAA+AGG | 0.639055 | 2_1:+25677287 | Msa0202830:CDS |
GGGGAAATGTCAGCTCTGCA+AGG | 0.640331 | 2_1:+25677717 | Msa0202830:CDS |
CCCAAAACTGACATTCATCA+CGG | 0.640525 | 2_1:-25675460 | None:intergenic |
AAGTGGTAAGAAGAGTAGTG+GGG | 0.642087 | 2_1:+25674786 | Msa0202830:CDS |
AGATGAATCCGCTTACAAAG+AGG | 0.644966 | 2_1:+25676274 | Msa0202830:CDS |
CGTTGCCTCCTCTTGCCGAG+GGG | 0.645194 | 2_1:+25676996 | Msa0202830:CDS |
ACTTGTATAAGAGCAAGCAT+TGG | 0.646489 | 2_1:-25678107 | None:intergenic |
GTTTACAAAACTATAGCAGT+CGG | 0.647515 | 2_1:+25675634 | Msa0202830:CDS |
AAGGGAGGAGTTAGGAGACG+AGG | 0.649176 | 2_1:+25677981 | Msa0202830:CDS |
ACCAGATTGTTGCTGCGTCG+AGG | 0.650752 | 2_1:-25678354 | None:intergenic |
CTGGACTTCAGTCCAGATGG+TGG | 0.651983 | 2_1:-25677522 | None:intergenic |
TGAGAAGGAAGCCCTAGATG+GGG | 0.654341 | 2_1:+25676658 | Msa0202830:CDS |
TGATAATGATGGTTTGCAGA+AGG | 0.655884 | 2_1:+25674984 | Msa0202830:CDS |
TCAATGGGGTTTGAACGAGA+AGG | 0.657711 | 2_1:+25676898 | Msa0202830:CDS |
GAAGTGCATGCAGTTAACGA+TGG | 0.662303 | 2_1:+25675915 | Msa0202830:CDS |
TCATACTTCGCAGAATGGTG+AGG | 0.666619 | 2_1:-25675264 | None:intergenic |
CATTGTTGCACAATCCATTG+GGG | 0.667500 | 2_1:+25677698 | Msa0202830:CDS |
TCGGCAAGAGGAGGCAACGT+AGG | 0.669852 | 2_1:-25676992 | None:intergenic |
TGAGCAGTGGAATTTCTCTG+AGG | 0.670368 | 2_1:+25676754 | Msa0202830:CDS |
AATACAATCTGGGATGTCCG+AGG | 0.672605 | 2_1:+25677659 | Msa0202830:CDS |
GGTTGCTTGCTAATGGAATG+GGG | 0.673772 | 2_1:+25678384 | Msa0202830:CDS |
AAGATGTGAGGGGAAAACAA+AGG | 0.674875 | 2_1:+25676834 | Msa0202830:CDS |
AGCAACAATCTGGTTCACGC+TGG | 0.677921 | 2_1:+25678363 | Msa0202830:CDS |
AACGTAGGAAGCTCTTCAGG+TGG | 0.681799 | 2_1:-25676977 | None:intergenic |
TTCCCCGTGATATCTTCCAG+TGG | 0.684916 | 2_1:-25677232 | None:intergenic |
TTTCTGCAGGTACAACAACA+GGG | 0.685625 | 2_1:-25677126 | None:intergenic |
TTCTTAGAGAGAGAAAACAA+AGG | 0.687279 | 2_1:+25674173 | Msa0202830:five_prime_UTR |
TGTCTCAGATTTCGAGACAG+CGG | 0.692288 | 2_1:+25676448 | Msa0202830:CDS |
TTTCTTCAGACAAAAGACGG+AGG | 0.693029 | 2_1:+25677028 | Msa0202830:CDS |
ACAATCTGGGATGTCCGAGG+AGG | 0.696494 | 2_1:+25677662 | Msa0202830:CDS |
ATCCGTGGGAGTTCAAAGGG+AGG | 0.699533 | 2_1:+25677966 | Msa0202830:CDS |
ACTGGCTCATAATTTCTCAG+AGG | 0.701368 | 2_1:-25678077 | None:intergenic |
TTTCCTGATCCGAAACCGAG+GGG | 0.702358 | 2_1:+25674940 | Msa0202830:CDS |
TGGTTGTAAGGATCAGTCAG+TGG | 0.703670 | 2_1:+25676349 | Msa0202830:CDS |
AACATCGAGTTGATCTTACG+AGG | 0.703864 | 2_1:+25675346 | Msa0202830:CDS |
TTCTTGAAGAAGACATACGG+GGG | 0.705596 | 2_1:+25678642 | Msa0202830:three_prime_UTR |
GTTGAGTCTCAAGATGTGAG+GGG | 0.712630 | 2_1:+25676824 | Msa0202830:CDS |
AAACAAACTCTGAGCCTGTG+TGG | 0.720121 | 2_1:-25677572 | None:intergenic |
TCTTGAAGAAGACATACGGG+GGG | 0.721815 | 2_1:+25678643 | Msa0202830:three_prime_UTR |
TTTCTTGAAGAAGACATACG+GGG | 0.723728 | 2_1:+25678641 | Msa0202830:three_prime_UTR |
GAAGCCTTAATGCGTCAATG+GGG | 0.725101 | 2_1:+25676884 | Msa0202830:CDS |
AGATGAATCTGCTTACAGAG+AGG | 0.725793 | 2_1:+25676373 | Msa0202830:CDS |
ATGTTGTCGAGAATGGAAAG+TGG | 0.726760 | 2_1:+25674769 | Msa0202830:CDS |
TGCCACTGGAAGATATCACG+GGG | 0.738197 | 2_1:+25677230 | Msa0202830:CDS |
AGAGGTAAAGGATCTTCACG+AGG | 0.753018 | 2_1:+25675677 | Msa0202830:CDS |
TGTTGGTGATAACACCAGCG+CGG | 0.808616 | 2_1:+25675491 | Msa0202830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATTTCAAAATTTAAAATC+TGG | + | chr2_1:25674499-25674518 | Msa0202830:intron | 10.0% |
!!! | AATTTCAAAATTTAAAATCT+GGG | + | chr2_1:25674500-25674519 | Msa0202830:intron | 10.0% |
!!! | TATTTGAAAATTTTAAAATC+TGG | + | chr2_1:25674581-25674600 | Msa0202830:intron | 10.0% |
!!! | ATTTGAAAATTTTAAAATCT+GGG | + | chr2_1:25674582-25674601 | Msa0202830:intron | 10.0% |
!! | TTATTTCAAAATATAAAATG+TGG | + | chr2_1:25674665-25674684 | Msa0202830:intron | 10.0% |
!! | TATTTCAAAATATAAAATGT+GGG | + | chr2_1:25674666-25674685 | Msa0202830:intron | 10.0% |
!!! | TTTGTATTTTTTTGTTTTTA+TGG | + | chr2_1:25674736-25674755 | Msa0202830:intron | 10.0% |
!! | TGATTAATCAATACAAAAAA+GGG | - | chr2_1:25674451-25674470 | None:intergenic | 15.0% |
!! | ATGATTAATCAATACAAAAA+AGG | - | chr2_1:25674452-25674471 | None:intergenic | 15.0% |
!! | TTGAGGTTAATTTATATATA+AGG | + | chr2_1:25677339-25677358 | Msa0202830:intron | 15.0% |
!!! | ATTTTTCTTTGCTTTTTTTT+AGG | + | chr2_1:25677427-25677446 | Msa0202830:intron | 15.0% |
!! | AACAAAATAAATCAATTTCT+AGG | - | chr2_1:25678677-25678696 | None:intergenic | 15.0% |
!! | GATTAATCAATACAAAAAAG+GGG | - | chr2_1:25674450-25674469 | None:intergenic | 20.0% |
!! | ACGTTAATTTACTTAAAGTT+TGG | + | chr2_1:25674547-25674566 | Msa0202830:intron | 20.0% |
!!! | AAATTTTAAAATCTGGGTTT+CGG | + | chr2_1:25674588-25674607 | Msa0202830:intron | 20.0% |
!! | ACGTTAATTTACTTAAAGTT+TGG | + | chr2_1:25674547-25674566 | Msa0202830:intron | 20.0% |
!!! | AATAGTAATGATGATAATGA+TGG | + | chr2_1:25674973-25674992 | Msa0202830:CDS | 20.0% |
!!! | TACAATTAAACCTCTTATTT+CGG | - | chr2_1:25675059-25675078 | None:intergenic | 20.0% |
!! | CAAAAAATTCATTATCTTGA+CGG | - | chr2_1:25676055-25676074 | None:intergenic | 20.0% |
!!! | TGAATTTTTTGTTGTTGATA+AGG | + | chr2_1:25676064-25676083 | Msa0202830:CDS | 20.0% |
!!! | GAATTTTTTGTTGTTGATAA+GGG | + | chr2_1:25676065-25676084 | Msa0202830:CDS | 20.0% |
!!! | CTCTTTATTTGATTTTGATA+TGG | + | chr2_1:25676685-25676704 | Msa0202830:CDS | 20.0% |
!!! | TTAAGTTTTTTAACCAAACA+TGG | + | chr2_1:25677383-25677402 | Msa0202830:intron | 20.0% |
!!! | TAAGTTTTTTAACCAAACAT+GGG | + | chr2_1:25677384-25677403 | Msa0202830:intron | 20.0% |
!!! | CTACAAAATATTTTTTGCTT+CGG | - | chr2_1:25678152-25678171 | None:intergenic | 20.0% |
!! | AGTACATGACATAAATAAAA+CGG | - | chr2_1:25678820-25678839 | None:intergenic | 20.0% |
!! | CAAATATATAATTTACCTGA+TGG | - | chr2_1:25678873-25678892 | None:intergenic | 20.0% |
!!! | TTCTGGAATTGAAATTGAAA+AGG | - | chr2_1:25674343-25674362 | None:intergenic | 25.0% |
!! | TTTTCAATTTCAATTCCAGA+AGG | + | chr2_1:25674342-25674361 | Msa0202830:intron | 25.0% |
! | CAAAATATAAAATGTGGGTT+TGG | + | chr2_1:25674671-25674690 | Msa0202830:intron | 25.0% |
! | TAGTCAGAAGAAATTGTTAA+AGG | + | chr2_1:25674816-25674835 | Msa0202830:CDS | 25.0% |
! | TATGAATAAAGCTATGTACT+TGG | + | chr2_1:25674849-25674868 | Msa0202830:CDS | 25.0% |
! | ATAAAAGGTCTATATGGAAT+TGG | + | chr2_1:25675007-25675026 | Msa0202830:CDS | 25.0% |
! | TTCATGTACATTTGATTGAA+GGG | + | chr2_1:25675088-25675107 | Msa0202830:CDS | 25.0% |
!! | AGATTTTCTTTTGACAAATC+AGG | - | chr2_1:25675804-25675823 | None:intergenic | 25.0% |
! | TTGGTATTCTTGAAAATTGA+GGG | - | chr2_1:25677073-25677092 | None:intergenic | 25.0% |
! | TTTGGTATTCTTGAAAATTG+AGG | - | chr2_1:25677074-25677093 | None:intergenic | 25.0% |
!!! | GTTTTGTATCATTGATTTTG+AGG | + | chr2_1:25677322-25677341 | Msa0202830:intron | 25.0% |
! | CAGCAATTTCAATTCAAATT+CGG | + | chr2_1:25677542-25677561 | Msa0202830:CDS | 25.0% |
! | CATTTGGTATAATGACATTA+GGG | - | chr2_1:25678574-25678593 | None:intergenic | 25.0% |
! | TCATTTGGTATAATGACATT+AGG | - | chr2_1:25678575-25678594 | None:intergenic | 25.0% |
!! | TTTTTCTTGAAGAAGACATA+CGG | + | chr2_1:25678639-25678658 | Msa0202830:three_prime_UTR | 25.0% |
! | ATGAAAGAAAAAGTAACAAG+TGG | - | chr2_1:25678797-25678816 | None:intergenic | 25.0% |
! | ATATTTGCAAATGCAAACTT+AGG | + | chr2_1:25678886-25678905 | Msa0202830:three_prime_UTR | 25.0% |
!! | GAAACAAACATTTTATTGCA+TGG | - | chr2_1:25678932-25678951 | None:intergenic | 25.0% |
TTCTTAGAGAGAGAAAACAA+AGG | + | chr2_1:25674173-25674192 | Msa0202830:five_prime_UTR | 30.0% | |
!!! | TGGGTTTTGTTCTTTTTCAT+TGG | + | chr2_1:25674519-25674538 | Msa0202830:intron | 30.0% |
! | TATAAAATGTGGGTTTGGTT+TGG | + | chr2_1:25674676-25674695 | Msa0202830:intron | 30.0% |
AGAAGGATAAAAGGTCTATA+TGG | + | chr2_1:25675001-25675020 | Msa0202830:CDS | 30.0% | |
CTTCATGTACATTTGATTGA+AGG | + | chr2_1:25675087-25675106 | Msa0202830:CDS | 30.0% | |
!! | TTTTGATGGTTCGAGTTTTT+CGG | + | chr2_1:25675122-25675141 | Msa0202830:CDS | 30.0% |
! | GAAGTTGACTTATACTTGTT+CGG | + | chr2_1:25675221-25675240 | Msa0202830:CDS | 30.0% |
ACTTATACTTGTTCGGTTTA+TGG | + | chr2_1:25675228-25675247 | Msa0202830:CDS | 30.0% | |
! | AACTGTCTTTGTTTAACATC+TGG | - | chr2_1:25675582-25675601 | None:intergenic | 30.0% |
GTTAAACAAAGACAGTTTGA+TGG | + | chr2_1:25675585-25675604 | Msa0202830:CDS | 30.0% | |
!!! | GCTATAGTTTTGTAAACTTC+CGG | - | chr2_1:25675631-25675650 | None:intergenic | 30.0% |
GTTTACAAAACTATAGCAGT+CGG | + | chr2_1:25675634-25675653 | Msa0202830:CDS | 30.0% | |
! | CTTTTCCAGAATCAAGTAAA+AGG | - | chr2_1:25676019-25676038 | None:intergenic | 30.0% |
AATTGAACCTGTTAAAGTAG+AGG | + | chr2_1:25676103-25676122 | Msa0202830:CDS | 30.0% | |
GATTTGAATTCTGCAACTTT+AGG | - | chr2_1:25676485-25676504 | None:intergenic | 30.0% | |
!! | CTTTGATGATGTTACAGAAT+CGG | + | chr2_1:25676532-25676551 | Msa0202830:CDS | 30.0% |
! | AATGGAAGTTTTACAGTGTT+TGG | + | chr2_1:25677162-25677181 | Msa0202830:CDS | 30.0% |
AATTGAAAAACTCTCAATGC+AGG | + | chr2_1:25677195-25677214 | Msa0202830:CDS | 30.0% | |
TTGCAGCATGATTCAATAAT+AGG | + | chr2_1:25677459-25677478 | Msa0202830:CDS | 30.0% | |
CGAATTTGAATTGAAATTGC+TGG | - | chr2_1:25677544-25677563 | None:intergenic | 30.0% | |
CAATTTCAATTCAAATTCGG+TGG | + | chr2_1:25677545-25677564 | Msa0202830:CDS | 30.0% | |
ATATGTGGATTTAGTGTTTC+CGG | - | chr2_1:25678545-25678564 | None:intergenic | 30.0% | |
ACATTAGGGTTTCTTATATG+TGG | - | chr2_1:25678560-25678579 | None:intergenic | 30.0% | |
! | CTAAGTCTATTAGTGTCATT+TGG | - | chr2_1:25678590-25678609 | None:intergenic | 30.0% |
! | TTTTCTTGAAGAAGACATAC+GGG | + | chr2_1:25678640-25678659 | Msa0202830:three_prime_UTR | 30.0% |
! | ATAAATCAATTTCTAGGCAC+AGG | - | chr2_1:25678671-25678690 | None:intergenic | 30.0% |
GTTATTAGAGAGAACAACAT+AGG | + | chr2_1:25678751-25678770 | Msa0202830:three_prime_UTR | 30.0% | |
! | AACATTTTATTGCATGGAAG+AGG | - | chr2_1:25678926-25678945 | None:intergenic | 30.0% |
GTCAAAGTGAAAGAGAAAAG+AGG | - | chr2_1:25674299-25674318 | None:intergenic | 35.0% | |
TTTCATGAGAAGATTCCTTC+TGG | - | chr2_1:25674360-25674379 | None:intergenic | 35.0% | |
AAGAGAAAGGGAATAAGCTT+AGG | - | chr2_1:25674401-25674420 | None:intergenic | 35.0% | |
TTATTCCCTTTCTCTTTACC+AGG | + | chr2_1:25674405-25674424 | Msa0202830:five_prime_UTR | 35.0% | |
TAATGAAGAGATTGAGTACC+TGG | - | chr2_1:25674426-25674445 | None:intergenic | 35.0% | |
AAAGTGGTAAGAAGAGTAGT+GGG | + | chr2_1:25674785-25674804 | Msa0202830:CDS | 35.0% | |
! | TGATAATGATGGTTTGCAGA+AGG | + | chr2_1:25674984-25675003 | Msa0202830:CDS | 35.0% |
! | ATGGTTTGCAGAAGGATAAA+AGG | + | chr2_1:25674992-25675011 | Msa0202830:CDS | 35.0% |
TTTCGCATATCCGAAATAAG+AGG | + | chr2_1:25675046-25675065 | Msa0202830:CDS | 35.0% | |
!! | GACTACAAGTTTCAGGTTAT+CGG | + | chr2_1:25675422-25675441 | Msa0202830:CDS | 35.0% |
!! | ACTACAAGTTTCAGGTTATC+GGG | + | chr2_1:25675423-25675442 | Msa0202830:CDS | 35.0% |
!!! | GAATGTCAGTTTTGGGTATA+CGG | + | chr2_1:25675467-25675486 | Msa0202830:CDS | 35.0% |
!! | TCAACACATTAGGAGCATTA+TGG | - | chr2_1:25675527-25675546 | None:intergenic | 35.0% |
! | GTATATCCATCTGGTTTGAT+TGG | - | chr2_1:25675831-25675850 | None:intergenic | 35.0% |
! | CGTTTCTTTTCTGATATCAG+AGG | - | chr2_1:25675856-25675875 | None:intergenic | 35.0% |
TCATGAAATGCATCAAGTTC+AGG | - | chr2_1:25675966-25675985 | None:intergenic | 35.0% | |
AATGACTCCTCTACTTTAAC+AGG | - | chr2_1:25676113-25676132 | None:intergenic | 35.0% | |
! | ACTTTTACCTATGATACTGC+AGG | + | chr2_1:25676170-25676189 | Msa0202830:CDS | 35.0% |
! | TTTTAAGCCTGCAGTATCAT+AGG | - | chr2_1:25676180-25676199 | None:intergenic | 35.0% |
GATACACAATTCTCTTGATG+AGG | + | chr2_1:25676220-25676239 | Msa0202830:CDS | 35.0% | |
AGATTCATCCTCTTTGTAAG+CGG | - | chr2_1:25676285-25676304 | None:intergenic | 35.0% | |
TACAAAGAGGATGAATCTTC+TGG | + | chr2_1:25676287-25676306 | Msa0202830:CDS | 35.0% | |
TCTCTTAAGACAGTTTGAGA+AGG | + | chr2_1:25676643-25676662 | Msa0202830:CDS | 35.0% | |
!! | TGATTTTGATATGGACTGTG+AGG | + | chr2_1:25676694-25676713 | Msa0202830:CDS | 35.0% |
TCTTCAGGTGGTAATTGAAT+TGG | - | chr2_1:25676968-25676987 | None:intergenic | 35.0% | |
! | CGTCTTTTGTCTGAAGAAAA+GGG | - | chr2_1:25677027-25677046 | None:intergenic | 35.0% |
! | CCTTTTCTTCAGACAAAAGA+CGG | + | chr2_1:25677025-25677044 | Msa0202830:CDS | 35.0% |
TTCAAGAATACCAAAGCTAG+TGG | + | chr2_1:25677079-25677098 | Msa0202830:CDS | 35.0% | |
TCAAGAATACCAAAGCTAGT+GGG | + | chr2_1:25677080-25677099 | Msa0202830:CDS | 35.0% | |
CTGTAAAACTTCCATTATCC+CGG | - | chr2_1:25677158-25677177 | None:intergenic | 35.0% | |
AGACAATACAACAAGTAGCA+TGG | + | chr2_1:25677254-25677273 | Msa0202830:CDS | 35.0% | |
GACAATACAACAAGTAGCAT+GGG | + | chr2_1:25677255-25677274 | Msa0202830:CDS | 35.0% | |
TAACCTTTCTGTTCCTTCTA+AGG | - | chr2_1:25677293-25677312 | None:intergenic | 35.0% | |
! | AGATACAACTTTTGCGCAAA+AGG | + | chr2_1:25677485-25677504 | Msa0202830:CDS | 35.0% |
! | TCGATTTTGTTCATAGCCAA+CGG | - | chr2_1:25677615-25677634 | None:intergenic | 35.0% |
! | CAAAATCGAAGCACTTTCAA+TGG | + | chr2_1:25677626-25677645 | Msa0202830:CDS | 35.0% |
AGGGATTGAGAATACAATCT+GGG | + | chr2_1:25677649-25677668 | Msa0202830:CDS | 35.0% | |
GATTGTGCAACAATGTTAGA+TGG | - | chr2_1:25677693-25677712 | None:intergenic | 35.0% | |
AACATTGTTGCACAATCCAT+TGG | + | chr2_1:25677696-25677715 | Msa0202830:CDS | 35.0% | |
ACATTGTTGCACAATCCATT+GGG | + | chr2_1:25677697-25677716 | Msa0202830:CDS | 35.0% | |
!! | GGCAAAGGCATTGATATTAA+CGG | + | chr2_1:25677738-25677757 | Msa0202830:CDS | 35.0% |
ACTCATCAAGAGTTAACGAT+AGG | - | chr2_1:25677848-25677867 | None:intergenic | 35.0% | |
TATCGTTAACTCTTGATGAG+TGG | + | chr2_1:25677847-25677866 | Msa0202830:CDS | 35.0% | |
CAATTTCACAGTAGCGTTAA+TGG | + | chr2_1:25678040-25678059 | Msa0202830:CDS | 35.0% | |
CATAATTTCTCAGAGGATCA+CGG | - | chr2_1:25678073-25678092 | None:intergenic | 35.0% | |
ACTTGTATAAGAGCAAGCAT+TGG | - | chr2_1:25678110-25678129 | None:intergenic | 35.0% | |
ACTTCAGTAATCTTGAACTG+AGG | - | chr2_1:25678284-25678303 | None:intergenic | 35.0% | |
CAAGATTACTGAAGTTCATG+TGG | + | chr2_1:25678289-25678308 | Msa0202830:CDS | 35.0% | |
AGCATTTCTTCACGCATATT+TGG | + | chr2_1:25678506-25678525 | Msa0202830:CDS | 35.0% | |
ATTTGGAAAAGCGAAAGAAC+CGG | + | chr2_1:25678523-25678542 | Msa0202830:CDS | 35.0% | |
CACTAATAGACTTAGTTGAC+TGG | + | chr2_1:25678595-25678614 | Msa0202830:exon | 35.0% | |
TTTCTTGAAGAAGACATACG+GGG | + | chr2_1:25678641-25678660 | Msa0202830:three_prime_UTR | 35.0% | |
! | TGTTAGAGCATCAATCAAGT+TGG | + | chr2_1:25678693-25678712 | Msa0202830:three_prime_UTR | 35.0% |
TCACACCTTGCAATTATTGA+AGG | - | chr2_1:25678725-25678744 | None:intergenic | 35.0% | |
TAATTGCAAGGTGTGAAACA+TGG | + | chr2_1:25678729-25678748 | Msa0202830:three_prime_UTR | 35.0% | |
! | AAACTTAGGTTGCAAACTTG+TGG | + | chr2_1:25678900-25678919 | Msa0202830:three_prime_UTR | 35.0% |
GAGTACCTGGTAAAGAGAAA+GGG | - | chr2_1:25674413-25674432 | None:intergenic | 40.0% | |
TGAGTACCTGGTAAAGAGAA+AGG | - | chr2_1:25674414-25674433 | None:intergenic | 40.0% | |
GAACATGATGTTGTCGAGAA+TGG | + | chr2_1:25674762-25674781 | Msa0202830:intron | 40.0% | |
ATGTTGTCGAGAATGGAAAG+TGG | + | chr2_1:25674769-25674788 | Msa0202830:CDS | 40.0% | |
GAAAGTGGTAAGAAGAGTAG+TGG | + | chr2_1:25674784-25674803 | Msa0202830:CDS | 40.0% | |
AAGTGGTAAGAAGAGTAGTG+GGG | + | chr2_1:25674786-25674805 | Msa0202830:CDS | 40.0% | |
!! | TAGAAGTGCTTCGAGGAATT+CGG | + | chr2_1:25674873-25674892 | Msa0202830:CDS | 40.0% |
! | TCGAATTCGAGGTCTAAAAC+TGG | + | chr2_1:25674904-25674923 | Msa0202830:CDS | 40.0% |
! | AATTCGAGGTCTAAAACTGG+TGG | + | chr2_1:25674907-25674926 | Msa0202830:CDS | 40.0% |
CTATTACTTCCTTTACCCCT+CGG | - | chr2_1:25674958-25674977 | None:intergenic | 40.0% | |
CTCGAACCATCAAAAGTAGA+AGG | - | chr2_1:25675117-25675136 | None:intergenic | 40.0% | |
!! | GTTCGAGTTTTTCGGTGTAT+TGG | + | chr2_1:25675130-25675149 | Msa0202830:CDS | 40.0% |
!! | GTTTTTCGGTGTATTGGAAG+AGG | + | chr2_1:25675136-25675155 | Msa0202830:CDS | 40.0% |
CTTGTTCGGTTTATGGAAGT+AGG | + | chr2_1:25675235-25675254 | Msa0202830:CDS | 40.0% | |
TTGCTTCATACTTCGCAGAA+TGG | - | chr2_1:25675272-25675291 | None:intergenic | 40.0% | |
!! | AACATCGAGTTGATCTTACG+AGG | + | chr2_1:25675346-25675365 | Msa0202830:CDS | 40.0% |
!! | AAGTTTCAGGTTATCGGGAA+AGG | + | chr2_1:25675428-25675447 | Msa0202830:CDS | 40.0% |
CCCAAAACTGACATTCATCA+CGG | - | chr2_1:25675463-25675482 | None:intergenic | 40.0% | |
! | CCGTGATGAATGTCAGTTTT+GGG | + | chr2_1:25675460-25675479 | Msa0202830:CDS | 40.0% |
!!! | AGTTTTGGGTATACGGTTGT+TGG | + | chr2_1:25675474-25675493 | Msa0202830:CDS | 40.0% |
ATATAAGACGCCTATTGAGC+TGG | - | chr2_1:25675730-25675749 | None:intergenic | 40.0% | |
! | TCAGAGGAAGTATATCCATC+TGG | - | chr2_1:25675840-25675859 | None:intergenic | 40.0% |
ATATCAGATGCATGCACTTC+AGG | - | chr2_1:25675879-25675898 | None:intergenic | 40.0% | |
! | CATCTGGCTTATCTGTTTCT+AGG | - | chr2_1:25675992-25676011 | None:intergenic | 40.0% |
CTAGAAACAGATAAGCCAGA+TGG | + | chr2_1:25675990-25676009 | Msa0202830:CDS | 40.0% | |
CATTATCTTGACGGTCTTCA+GGG | - | chr2_1:25676046-25676065 | None:intergenic | 40.0% | |
TCATTATCTTGACGGTCTTC+AGG | - | chr2_1:25676047-25676066 | None:intergenic | 40.0% | |
AGTAGAGGAGTCATTCTCAA+AGG | + | chr2_1:25676118-25676137 | Msa0202830:CDS | 40.0% | |
!! | GCAGGCTTAAAAGTATCTTC+TGG | + | chr2_1:25676188-25676207 | Msa0202830:CDS | 40.0% |
TCTCTTGATGAGGCAAATGA+TGG | + | chr2_1:25676230-25676249 | Msa0202830:CDS | 40.0% | |
TGAGGCAAATGATGGTTGTA+AGG | + | chr2_1:25676238-25676257 | Msa0202830:CDS | 40.0% | |
AGATGAATCCGCTTACAAAG+AGG | + | chr2_1:25676274-25676293 | Msa0202830:CDS | 40.0% | |
GATACACGATTCTCTTGATG+AGG | + | chr2_1:25676319-25676338 | Msa0202830:CDS | 40.0% | |
TCTCTTGATGAGGCAAATGA+TGG | + | chr2_1:25676230-25676249 | Msa0202830:CDS | 40.0% | |
TGAGGCAAATGATGGTTGTA+AGG | + | chr2_1:25676238-25676257 | Msa0202830:CDS | 40.0% | |
AGATGAATCTGCTTACAGAG+AGG | + | chr2_1:25676373-25676392 | Msa0202830:CDS | 40.0% | |
TGTCTTAAGAGAAGCTCTCT+CGG | - | chr2_1:25676635-25676654 | None:intergenic | 40.0% | |
GATGGCTATGATGCTTCTAA+TGG | + | chr2_1:25676728-25676747 | Msa0202830:CDS | 40.0% | |
AAGATGTGAGGGGAAAACAA+AGG | + | chr2_1:25676834-25676853 | Msa0202830:CDS | 40.0% | |
AGATGTGAGGGGAAAACAAA+GGG | + | chr2_1:25676835-25676854 | Msa0202830:CDS | 40.0% | |
GGCTCAAATGCTAGAAGATT+TGG | + | chr2_1:25676856-25676875 | Msa0202830:CDS | 40.0% | |
AGAAGCCTTAATGCGTCAAT+GGG | + | chr2_1:25676883-25676902 | Msa0202830:CDS | 40.0% | |
TCTCCACCAAAAGATTGTAC+CGG | + | chr2_1:25676932-25676951 | Msa0202830:CDS | 40.0% | |
! | AAACCGGTACAATCTTTTGG+TGG | - | chr2_1:25676938-25676957 | None:intergenic | 40.0% |
!! | CCAAAAGATTGTACCGGTTT+CGG | + | chr2_1:25676938-25676957 | Msa0202830:CDS | 40.0% |
TTGAATTGGACTTCCGAAAC+CGG | - | chr2_1:25676954-25676973 | None:intergenic | 40.0% | |
! | CCGTCTTTTGTCTGAAGAAA+AGG | - | chr2_1:25677028-25677047 | None:intergenic | 40.0% |
TTTCTTCAGACAAAAGACGG+AGG | + | chr2_1:25677028-25677047 | Msa0202830:CDS | 40.0% | |
! | GATTAAACTCCCACTAGCTT+TGG | - | chr2_1:25677092-25677111 | None:intergenic | 40.0% |
TAGTGGGAGTTTAATCATGC+AGG | + | chr2_1:25677096-25677115 | Msa0202830:CDS | 40.0% | |
TTTCTGCAGGTACAACAACA+GGG | - | chr2_1:25677129-25677148 | None:intergenic | 40.0% | |
ATTTCTGCAGGTACAACAAC+AGG | - | chr2_1:25677130-25677149 | None:intergenic | 40.0% | |
TGTTGTTGTACCTGCAGAAA+TGG | + | chr2_1:25677129-25677148 | Msa0202830:CDS | 40.0% | |
GTTGTTGTACCTGCAGAAAT+GGG | + | chr2_1:25677130-25677149 | Msa0202830:CDS | 40.0% | |
! | TTACAGTGTTTGGCTTCAGT+TGG | + | chr2_1:25677172-25677191 | Msa0202830:CDS | 40.0% |
AAAACTCTCAATGCAGGCAA+AGG | + | chr2_1:25677201-25677220 | Msa0202830:CDS | 40.0% | |
AATGCCACTGGAAGATATCA+CGG | + | chr2_1:25677228-25677247 | Msa0202830:CDS | 40.0% | |
GAAACATGTAAGCCCATGTT+TGG | - | chr2_1:25677399-25677418 | None:intergenic | 40.0% | |
TTTGCGCAAAAGGACTTGAA+AGG | + | chr2_1:25677495-25677514 | Msa0202830:CDS | 40.0% | |
AATTGAAGATCTTGCACCGT+TGG | + | chr2_1:25677596-25677615 | Msa0202830:CDS | 40.0% | |
! | AATCGAAGCACTTTCAATGG+AGG | + | chr2_1:25677629-25677648 | Msa0202830:CDS | 40.0% |
! | ATCGAAGCACTTTCAATGGA+GGG | + | chr2_1:25677630-25677649 | Msa0202830:CDS | 40.0% |
GAGGGATTGAGAATACAATC+TGG | + | chr2_1:25677648-25677667 | Msa0202830:CDS | 40.0% | |
CATTGTTGCACAATCCATTG+GGG | + | chr2_1:25677698-25677717 | Msa0202830:CDS | 40.0% | |
ATTGATATTAACGGCTCCCT+CGG | + | chr2_1:25677747-25677766 | Msa0202830:CDS | 40.0% | |
GTAAAAGACAGCAGTGATGT+TGG | + | chr2_1:25677804-25677823 | Msa0202830:CDS | 40.0% | |
GTCGAAAGAGTTAGCATGAT+GGG | - | chr2_1:25677943-25677962 | None:intergenic | 40.0% | |
AGTCGAAAGAGTTAGCATGA+TGG | - | chr2_1:25677944-25677963 | None:intergenic | 40.0% | |
AACTCTTTCGACTTTATCCG+TGG | + | chr2_1:25677951-25677970 | Msa0202830:CDS | 40.0% | |
ACTCTTTCGACTTTATCCGT+GGG | + | chr2_1:25677952-25677971 | Msa0202830:CDS | 40.0% | |
TTTATCCGTGGGAGTTCAAA+GGG | + | chr2_1:25677963-25677982 | Msa0202830:CDS | 40.0% | |
! | ACTGGCTCATAATTTCTCAG+AGG | - | chr2_1:25678080-25678099 | None:intergenic | 40.0% |
CTGAGAAATTATGAGCCAGT+TGG | + | chr2_1:25678080-25678099 | Msa0202830:CDS | 40.0% | |
GAGCGAAATAGTAGCAAAGA+TGG | + | chr2_1:25678214-25678233 | Msa0202830:CDS | 40.0% | |
CGAAATAGTAGCAAAGATGG+AGG | + | chr2_1:25678217-25678236 | Msa0202830:CDS | 40.0% | |
ATTACTGAAGTTCATGTGGC+AGG | + | chr2_1:25678293-25678312 | Msa0202830:CDS | 40.0% | |
AGCCTCAGAAAAAGAAGCTT+TGG | + | chr2_1:25678327-25678346 | Msa0202830:CDS | 40.0% | |
GCCTCAGAAAAAGAAGCTTT+GGG | + | chr2_1:25678328-25678347 | Msa0202830:CDS | 40.0% | |
CCTCAGAAAAAGAAGCTTTG+GGG | + | chr2_1:25678329-25678348 | Msa0202830:CDS | 40.0% | |
! | TGGTTGCTTGCTAATGGAAT+GGG | + | chr2_1:25678383-25678402 | Msa0202830:CDS | 40.0% |
!!! | GATGCAGCTTTTGACTTCAT+TGG | - | chr2_1:25678434-25678453 | None:intergenic | 40.0% |
TGCATCTAAATCGATTGCTC+CGG | + | chr2_1:25678448-25678467 | Msa0202830:CDS | 40.0% | |
TGAAGAAATGCTCCACAAAG+TGG | - | chr2_1:25678498-25678517 | None:intergenic | 40.0% | |
TTCTTGAAGAAGACATACGG+GGG | + | chr2_1:25678642-25678661 | Msa0202830:three_prime_UTR | 40.0% | |
CTGGTCCTTCAATAATTGCA+AGG | + | chr2_1:25678717-25678736 | Msa0202830:three_prime_UTR | 40.0% | |
TAGTGTGTGCATATTCCATC+AGG | + | chr2_1:25678855-25678874 | Msa0202830:three_prime_UTR | 40.0% | |
TGGGTTTCGGTCTGTTTCAT+TGG | + | chr2_1:25674601-25674620 | Msa0202830:intron | 45.0% | |
! | AAGAAGAGTAGTGGGGTTTC+TGG | + | chr2_1:25674793-25674812 | Msa0202830:CDS | 45.0% |
!! | ACTTGGATAGAAGTGCTTCG+AGG | + | chr2_1:25674866-25674885 | Msa0202830:CDS | 45.0% |
ATGGAATTGGAGACCGTTGA+AGG | + | chr2_1:25675020-25675039 | Msa0202830:CDS | 45.0% | |
!! | ATATGCGAAAGCGCCTTCAA+CGG | - | chr2_1:25675036-25675055 | None:intergenic | 45.0% |
!! | GGGATGCCTTCTACTTTTGA+TGG | + | chr2_1:25675108-25675127 | Msa0202830:CDS | 45.0% |
! | TTTCGGTGTATTGGAAGAGG+AGG | + | chr2_1:25675139-25675158 | Msa0202830:CDS | 45.0% |
! | TTCGGTGTATTGGAAGAGGA+GGG | + | chr2_1:25675140-25675159 | Msa0202830:CDS | 45.0% |
TCGGTTTATGGAAGTAGGAG+TGG | + | chr2_1:25675240-25675259 | Msa0202830:CDS | 45.0% | |
TCATACTTCGCAGAATGGTG+AGG | - | chr2_1:25675267-25675286 | None:intergenic | 45.0% | |
TGTTTCCCCAAATCAAGCTC+CGG | - | chr2_1:25675330-25675349 | None:intergenic | 45.0% | |
!! | GGAAGTGGACTACAAGTTTC+AGG | + | chr2_1:25675415-25675434 | Msa0202830:CDS | 45.0% |
AGGTTATCGGGAAAGGCTAA+GGG | + | chr2_1:25675435-25675454 | Msa0202830:CDS | 45.0% | |
! | GCCGTGATGAATGTCAGTTT+TGG | + | chr2_1:25675459-25675478 | Msa0202830:CDS | 45.0% |
!! | CTCCTAATGTGTTGACTTCG+AGG | + | chr2_1:25675532-25675551 | Msa0202830:CDS | 45.0% |
TGCCTCGAAGTCAACACATT+AGG | - | chr2_1:25675537-25675556 | None:intergenic | 45.0% | |
AGAGGTAAAGGATCTTCACG+AGG | + | chr2_1:25675677-25675696 | Msa0202830:CDS | 45.0% | |
TCGTTAACTGCATGCACTTC+AGG | - | chr2_1:25675915-25675934 | None:intergenic | 45.0% | |
GAAGTGCATGCAGTTAACGA+TGG | + | chr2_1:25675915-25675934 | Msa0202830:CDS | 45.0% | |
TCAAGTAAAAGGCAGCCATC+TGG | - | chr2_1:25676008-25676027 | None:intergenic | 45.0% | |
! | GGCTGCCTTTTACTTGATTC+TGG | + | chr2_1:25676011-25676030 | Msa0202830:CDS | 45.0% |
TGGTTGTAAGGATCAGTCAG+TGG | + | chr2_1:25676250-25676269 | Msa0202830:CDS | 45.0% | |
TGTCTCAGATTTCGAGACAG+CGG | + | chr2_1:25676448-25676467 | Msa0202830:CDS | 45.0% | |
TTTGAGAAGGAAGCCCTAGA+TGG | + | chr2_1:25676656-25676675 | Msa0202830:CDS | 45.0% | |
TTGAGAAGGAAGCCCTAGAT+GGG | + | chr2_1:25676657-25676676 | Msa0202830:CDS | 45.0% | |
TAAAGAGAAGCCCCCATCTA+GGG | - | chr2_1:25676672-25676691 | None:intergenic | 45.0% | |
ATAAAGAGAAGCCCCCATCT+AGG | - | chr2_1:25676673-25676692 | None:intergenic | 45.0% | |
TGTGAGGATGAAGCTGATGA+TGG | + | chr2_1:25676710-25676729 | Msa0202830:CDS | 45.0% | |
TGAGCAGTGGAATTTCTCTG+AGG | + | chr2_1:25676754-25676773 | Msa0202830:CDS | 45.0% | |
GAGCAGTGGAATTTCTCTGA+GGG | + | chr2_1:25676755-25676774 | Msa0202830:CDS | 45.0% | |
! | CTTCTGAAGGTCTTGGAACA+AGG | - | chr2_1:25676795-25676814 | None:intergenic | 45.0% |
CTTGTTCCAAGACCTTCAGA+AGG | + | chr2_1:25676793-25676812 | Msa0202830:CDS | 45.0% | |
TCGTTGAGTCTCAAGATGTG+AGG | + | chr2_1:25676822-25676841 | Msa0202830:CDS | 45.0% | |
CGTTGAGTCTCAAGATGTGA+GGG | + | chr2_1:25676823-25676842 | Msa0202830:CDS | 45.0% | |
GTTGAGTCTCAAGATGTGAG+GGG | + | chr2_1:25676824-25676843 | Msa0202830:CDS | 45.0% | |
CAGAAGCCTTAATGCGTCAA+TGG | + | chr2_1:25676882-25676901 | Msa0202830:CDS | 45.0% | |
GAAGCCTTAATGCGTCAATG+GGG | + | chr2_1:25676884-25676903 | Msa0202830:CDS | 45.0% | |
CAAACCCCATTGACGCATTA+AGG | - | chr2_1:25676891-25676910 | None:intergenic | 45.0% | |
TCAATGGGGTTTGAACGAGA+AGG | + | chr2_1:25676898-25676917 | Msa0202830:CDS | 45.0% | |
! | CCGAAACCGGTACAATCTTT+TGG | - | chr2_1:25676941-25676960 | None:intergenic | 45.0% |
! | AGAAATGGGTTCCGGGATAA+TGG | + | chr2_1:25677144-25677163 | Msa0202830:CDS | 45.0% |
ATGCCACTGGAAGATATCAC+GGG | + | chr2_1:25677229-25677248 | Msa0202830:CDS | 45.0% | |
!! | CTTTCTGTTCCTTCTAAGGC+AGG | - | chr2_1:25677289-25677308 | None:intergenic | 45.0% |
CTGCCTTAGAAGGAACAGAA+AGG | + | chr2_1:25677287-25677306 | Msa0202830:CDS | 45.0% | |
TTGAAAGGAACACCACCATC+TGG | + | chr2_1:25677510-25677529 | Msa0202830:CDS | 45.0% | |
AAACAAACTCTGAGCCTGTG+TGG | - | chr2_1:25677575-25677594 | None:intergenic | 45.0% | |
! | AATACAATCTGGGATGTCCG+AGG | + | chr2_1:25677659-25677678 | Msa0202830:CDS | 45.0% |
!! | AGCAGTGATGTTGGTGTTGA+TGG | + | chr2_1:25677813-25677832 | Msa0202830:CDS | 45.0% |
!! | GCAGTGATGTTGGTGTTGAT+GGG | + | chr2_1:25677814-25677833 | Msa0202830:CDS | 45.0% |
TCTTGATGAGTGGATGAAGC+TGG | + | chr2_1:25677857-25677876 | Msa0202830:CDS | 45.0% | |
CTTTATCCGTGGGAGTTCAA+AGG | + | chr2_1:25677962-25677981 | Msa0202830:CDS | 45.0% | |
! | TAGCAAACCGCATTTTCTGC+CGG | - | chr2_1:25678015-25678034 | None:intergenic | 45.0% |
GTCGTCGTTGTTACGTAACT+CGG | - | chr2_1:25678180-25678199 | None:intergenic | 45.0% | |
GTTACGTAACAACGACGACA+AGG | + | chr2_1:25678181-25678200 | Msa0202830:CDS | 45.0% | |
GATGGAGGACGCAAATAAAG+AGG | + | chr2_1:25678232-25678251 | Msa0202830:CDS | 45.0% | |
!!! | AGCTTCTTTTTCTGAGGCTC+AGG | - | chr2_1:25678326-25678345 | None:intergenic | 45.0% |
! | CCCCAAAGCTTCTTTTTCTG+AGG | - | chr2_1:25678332-25678351 | None:intergenic | 45.0% |
! | CTGGTTGCTTGCTAATGGAA+TGG | + | chr2_1:25678382-25678401 | Msa0202830:CDS | 45.0% |
! | GGTTGCTTGCTAATGGAATG+GGG | + | chr2_1:25678384-25678403 | Msa0202830:CDS | 45.0% |
TCTTGAAGAAGACATACGGG+GGG | + | chr2_1:25678643-25678662 | Msa0202830:three_prime_UTR | 45.0% | |
!! | GAGCATCAATCAAGTTGGAC+TGG | + | chr2_1:25678698-25678717 | Msa0202830:three_prime_UTR | 45.0% |
TGTTTCCTGATCCGAAACCG+AGG | + | chr2_1:25674938-25674957 | Msa0202830:CDS | 50.0% | |
GTTTCCTGATCCGAAACCGA+GGG | + | chr2_1:25674939-25674958 | Msa0202830:CDS | 50.0% | |
TTTCCTGATCCGAAACCGAG+GGG | + | chr2_1:25674940-25674959 | Msa0202830:CDS | 50.0% | |
CTTCCTTTACCCCTCGGTTT+CGG | - | chr2_1:25674952-25674971 | None:intergenic | 50.0% | |
GTGTATTGGAAGAGGAGGGA+CGG | + | chr2_1:25675144-25675163 | Msa0202830:CDS | 50.0% | |
TGTATTGGAAGAGGAGGGAC+GGG | + | chr2_1:25675145-25675164 | Msa0202830:CDS | 50.0% | |
ACACACTGAACCACCTTAGC+CGG | - | chr2_1:25675186-25675205 | None:intergenic | 50.0% | |
GAGGTTGCTTCCTCTCACTT+TGG | + | chr2_1:25675365-25675384 | Msa0202830:CDS | 50.0% | |
GTTGCTTCCTCTCACTTTGG+AGG | + | chr2_1:25675368-25675387 | Msa0202830:CDS | 50.0% | |
TCAAGCTCCTCCAAAGTGAG+AGG | - | chr2_1:25675378-25675397 | None:intergenic | 50.0% | |
! | TCTCACTTTGGAGGAGCTTG+AGG | + | chr2_1:25675377-25675396 | Msa0202830:CDS | 50.0% |
CAGGTTATCGGGAAAGGCTA+AGG | + | chr2_1:25675434-25675453 | Msa0202830:CDS | 50.0% | |
!! | TGTTGGTGATAACACCAGCG+CGG | + | chr2_1:25675491-25675510 | Msa0202830:CDS | 50.0% |
TTGATGGAAGCAGCAGCATG+AGG | + | chr2_1:25675601-25675620 | Msa0202830:CDS | 50.0% | |
TCAAGCTGCGGAAGAGGTAA+AGG | + | chr2_1:25675665-25675684 | Msa0202830:CDS | 50.0% | |
GCTAGTGCAGACTTAGACGA+TGG | - | chr2_1:25675708-25675727 | None:intergenic | 50.0% | |
TCTGCACTAGCCAGCTCAAT+AGG | + | chr2_1:25675717-25675736 | Msa0202830:CDS | 50.0% | |
AGAAAATGCGTGCAGCTCTC+TGG | + | chr2_1:25675764-25675783 | Msa0202830:CDS | 50.0% | |
CTCGAGCCAATCAAACCAGA+TGG | + | chr2_1:25675822-25675841 | Msa0202830:CDS | 50.0% | |
AGTTCAGGTGTGTCAAGCAC+TGG | - | chr2_1:25675951-25675970 | None:intergenic | 50.0% | |
! | TTTTCAGAATCCGAGCCTGC+TGG | - | chr2_1:25676599-25676618 | None:intergenic | 50.0% |
! | CTCGGATTCTGAAAACGAGC+CGG | + | chr2_1:25676604-25676623 | Msa0202830:CDS | 50.0% |
TGAGAAGGAAGCCCTAGATG+GGG | + | chr2_1:25676658-25676677 | Msa0202830:CDS | 50.0% | |
!! | CTTCTAATGGCTCTGAGCAG+TGG | + | chr2_1:25676741-25676760 | Msa0202830:CDS | 50.0% |
! | GATGCTCCTTCTGAAGGTCT+TGG | - | chr2_1:25676802-25676821 | None:intergenic | 50.0% |
CAACGAGATGCTCCTTCTGA+AGG | - | chr2_1:25676808-25676827 | None:intergenic | 50.0% | |
AACGTAGGAAGCTCTTCAGG+TGG | - | chr2_1:25676980-25676999 | None:intergenic | 50.0% | |
CGGAGGCTATCTACGATCTA+TGG | + | chr2_1:25677045-25677064 | Msa0202830:CDS | 50.0% | |
TGCAGGTACAACAACAGGGT+TGG | - | chr2_1:25677125-25677144 | None:intergenic | 50.0% | |
! | GTACCTGCAGAAATGGGTTC+CGG | + | chr2_1:25677136-25677155 | Msa0202830:CDS | 50.0% |
! | TACCTGCAGAAATGGGTTCC+GGG | + | chr2_1:25677137-25677156 | Msa0202830:CDS | 50.0% |
GGCAAAGGAGTTAATGCCAC+TGG | + | chr2_1:25677216-25677235 | Msa0202830:CDS | 50.0% | |
TGCCACTGGAAGATATCACG+GGG | + | chr2_1:25677230-25677249 | Msa0202830:CDS | 50.0% | |
TTCCCCGTGATATCTTCCAG+TGG | - | chr2_1:25677235-25677254 | None:intergenic | 50.0% | |
GAAGCTATGCCTGCCTTAGA+AGG | + | chr2_1:25677277-25677296 | Msa0202830:CDS | 50.0% | |
TTGCTGGACTTCAGTCCAGA+TGG | - | chr2_1:25677528-25677547 | None:intergenic | 50.0% | |
AAACTCTGAGCCTGTGTGGT+TGG | - | chr2_1:25677571-25677590 | None:intergenic | 50.0% | |
GTTAGATGGTGCATCCTCCT+CGG | - | chr2_1:25677679-25677698 | None:intergenic | 50.0% | |
CAGAGCTGACATTTCCCCAA+TGG | - | chr2_1:25677715-25677734 | None:intergenic | 50.0% | |
ATGTCAGCTCTGCAAGGCAA+AGG | + | chr2_1:25677723-25677742 | Msa0202830:CDS | 50.0% | |
GAGTGGATGAAGCTGGATTC+TGG | + | chr2_1:25677864-25677883 | Msa0202830:CDS | 50.0% | |
GGAGTTCAAAGGGAGGAGTT+AGG | + | chr2_1:25677973-25677992 | Msa0202830:CDS | 50.0% | |
AAAGGCTCCGGCAGAAAATG+CGG | + | chr2_1:25678005-25678024 | Msa0202830:CDS | 50.0% | |
! | GGCAGAAAATGCGGTTTGCT+AGG | + | chr2_1:25678014-25678033 | Msa0202830:CDS | 50.0% |
!! | GCAAGCATTGGTGTTCCAAC+TGG | - | chr2_1:25678098-25678117 | None:intergenic | 50.0% |
CAACGACGACAAGGATGATG+AGG | + | chr2_1:25678190-25678209 | Msa0202830:CDS | 50.0% | |
! | AGCAACAATCTGGTTCACGC+TGG | + | chr2_1:25678363-25678382 | Msa0202830:CDS | 50.0% |
! | TCACGCTGGTTGCTTGCTAA+TGG | + | chr2_1:25678377-25678396 | Msa0202830:CDS | 50.0% |
GATTGCTCCGGTTACCACAA+AGG | + | chr2_1:25678460-25678479 | Msa0202830:CDS | 50.0% | |
GGTTGTGCCTTTGTGGTAAC+CGG | - | chr2_1:25678470-25678489 | None:intergenic | 50.0% | |
!! | GCTTCGAGGAATTCGGTGTC+TGG | + | chr2_1:25674880-25674899 | Msa0202830:CDS | 55.0% |
! | CGGTGTCTGGTTCGAATTCG+AGG | + | chr2_1:25674893-25674912 | Msa0202830:CDS | 55.0% |
TTACCCCTCGGTTTCGGATC+AGG | - | chr2_1:25674946-25674965 | None:intergenic | 55.0% | |
GATCCGAAACCGAGGGGTAA+AGG | + | chr2_1:25674946-25674965 | Msa0202830:CDS | 55.0% | |
GTATTGGAAGAGGAGGGACG+GGG | + | chr2_1:25675146-25675165 | Msa0202830:CDS | 55.0% | |
! | TTTGGTGACTCGTCCGGCTA+AGG | + | chr2_1:25675170-25675189 | Msa0202830:CDS | 55.0% |
GGCTAAGGTGGTTCAGTGTG+TGG | + | chr2_1:25675185-25675204 | Msa0202830:CDS | 55.0% | |
AGTGCGCCGGAGCTTGATTT+GGG | + | chr2_1:25675321-25675340 | Msa0202830:CDS | 55.0% | |
! | CACTTTGGAGGAGCTTGAGG+AGG | + | chr2_1:25675380-25675399 | Msa0202830:CDS | 55.0% |
GCTTGAGGAGGAGAAGAGCT+CGG | + | chr2_1:25675392-25675411 | Msa0202830:CDS | 55.0% | |
CTTGAGGAGGAGAAGAGCTC+GGG | + | chr2_1:25675393-25675412 | Msa0202830:CDS | 55.0% | |
TTGAGGAGGAGAAGAGCTCG+GGG | + | chr2_1:25675394-25675413 | Msa0202830:CDS | 55.0% | |
AACACCAGCGCGGCAAAAGA+TGG | + | chr2_1:25675501-25675520 | Msa0202830:CDS | 55.0% | |
ATGGAAGCAGCAGCATGAGG+CGG | + | chr2_1:25675604-25675623 | Msa0202830:CDS | 55.0% | |
TCGGTACTCGTCTCAAGCTG+CGG | + | chr2_1:25675653-25675672 | Msa0202830:CDS | 55.0% | |
ATCCGAGCCTGCTGGACTAT+GGG | - | chr2_1:25676591-25676610 | None:intergenic | 55.0% | |
AATCCGAGCCTGCTGGACTA+TGG | - | chr2_1:25676592-25676611 | None:intergenic | 55.0% | |
AGAAGCTCTCTCGGAGACTC+CGG | - | chr2_1:25676626-25676645 | None:intergenic | 55.0% | |
GAGAAGGAAGCCCTAGATGG+GGG | + | chr2_1:25676659-25676678 | Msa0202830:CDS | 55.0% | |
GGCAACGTAGGAAGCTCTTC+AGG | - | chr2_1:25676983-25677002 | None:intergenic | 55.0% | |
AAGAAAAGGGCCCAACCCCT+CGG | - | chr2_1:25677014-25677033 | None:intergenic | 55.0% | |
ATCCCGGAACCCATTTCTGC+AGG | - | chr2_1:25677142-25677161 | None:intergenic | 55.0% | |
CTGGACTTCAGTCCAGATGG+TGG | - | chr2_1:25677525-25677544 | None:intergenic | 55.0% | |
! | AATTCGGTGGCCAACCACAC+AGG | + | chr2_1:25677558-25677577 | Msa0202830:CDS | 55.0% |
! | ACAATCTGGGATGTCCGAGG+AGG | + | chr2_1:25677662-25677681 | Msa0202830:CDS | 55.0% |
GGGGAAATGTCAGCTCTGCA+AGG | + | chr2_1:25677717-25677736 | Msa0202830:CDS | 55.0% | |
TATTAACGGCTCCCTCGGCA+TGG | + | chr2_1:25677752-25677771 | Msa0202830:CDS | 55.0% | |
ATCCGTGGGAGTTCAAAGGG+AGG | + | chr2_1:25677966-25677985 | Msa0202830:CDS | 55.0% | |
CTCCTCCCTTTGAACTCCCA+CGG | - | chr2_1:25677971-25677990 | None:intergenic | 55.0% | |
AAGGGAGGAGTTAGGAGACG+AGG | + | chr2_1:25677981-25678000 | Msa0202830:CDS | 55.0% | |
GGAGTTAGGAGACGAGGCAA+AGG | + | chr2_1:25677987-25678006 | Msa0202830:CDS | 55.0% | |
ACCTCGACGCAGCAACAATC+TGG | + | chr2_1:25678353-25678372 | Msa0202830:CDS | 55.0% | |
ACCAGATTGTTGCTGCGTCG+AGG | - | chr2_1:25678357-25678376 | None:intergenic | 55.0% | |
!! | CACAACCTGCTGCCACTTTG+TGG | + | chr2_1:25678483-25678502 | Msa0202830:CDS | 55.0% |
ATGCTCCACAAAGTGGCAGC+AGG | - | chr2_1:25678491-25678510 | None:intergenic | 55.0% | |
! | GAAGAGGAGGGACGGGGTTT+TGG | + | chr2_1:25675152-25675171 | Msa0202830:CDS | 60.0% |
!! | CGGGGTTTTGGTGACTCGTC+CGG | + | chr2_1:25675164-25675183 | Msa0202830:CDS | 60.0% |
TGCTTCGCTTCTCAGTGCGC+CGG | + | chr2_1:25675308-25675327 | Msa0202830:CDS | 60.0% | |
CAGTGCGCCGGAGCTTGATT+TGG | + | chr2_1:25675320-25675339 | Msa0202830:CDS | 60.0% | |
! | GTGCGCCGGAGCTTGATTTG+GGG | + | chr2_1:25675322-25675341 | Msa0202830:CDS | 60.0% |
AGGAGAAGAGCTCGGGGAAG+TGG | + | chr2_1:25675400-25675419 | Msa0202830:CDS | 60.0% | |
! | ATGGCCATCTTTTGCCGCGC+TGG | - | chr2_1:25675508-25675527 | None:intergenic | 60.0% |
TGGAAGCAGCAGCATGAGGC+GGG | + | chr2_1:25675605-25675624 | Msa0202830:CDS | 60.0% | |
CTCGTCTCAAGCTGCGGAAG+AGG | + | chr2_1:25675659-25675678 | Msa0202830:CDS | 60.0% | |
GACACAGCCCATAGTCCAGC+AGG | + | chr2_1:25676581-25676600 | Msa0202830:CDS | 60.0% | |
AGCCCATAGTCCAGCAGGCT+CGG | + | chr2_1:25676586-25676605 | Msa0202830:CDS | 60.0% | |
TCGGCAAGAGGAGGCAACGT+AGG | - | chr2_1:25676995-25677014 | None:intergenic | 60.0% | |
TACGTTGCCTCCTCTTGCCG+AGG | + | chr2_1:25676994-25677013 | Msa0202830:CDS | 60.0% | |
ACGTTGCCTCCTCTTGCCGA+GGG | + | chr2_1:25676995-25677014 | Msa0202830:CDS | 60.0% | |
!! | GGCTGCTGGTTTGCAGCTGA+TGG | + | chr2_1:25677779-25677798 | Msa0202830:CDS | 60.0% |
AGGAGACGAGGCAAAGGCTC+CGG | + | chr2_1:25677993-25678012 | Msa0202830:CDS | 60.0% | |
GGCAGCAGGTTGTGCCTTTG+TGG | - | chr2_1:25678477-25678496 | None:intergenic | 60.0% | |
GGTGACTCGTCCGGCTAAGG+TGG | + | chr2_1:25675173-25675192 | Msa0202830:CDS | 65.0% | |
CGTTGCCTCCTCTTGCCGAG+GGG | + | chr2_1:25676996-25677015 | Msa0202830:CDS | 65.0% | |
CCTCCTCTTGCCGAGGGGTT+GGG | + | chr2_1:25677001-25677020 | Msa0202830:CDS | 65.0% | |
AACGGCTCCCTCGGCATGGA+AGG | + | chr2_1:25677756-25677775 | Msa0202830:CDS | 65.0% | |
ACGGCTCCCTCGGCATGGAA+GGG | + | chr2_1:25677757-25677776 | Msa0202830:CDS | 65.0% | |
AGCAGCCCCTTCCATGCCGA+GGG | - | chr2_1:25677766-25677785 | None:intergenic | 65.0% | |
AGCAGCAGCATGAGGCGGGC+CGG | + | chr2_1:25675609-25675628 | Msa0202830:CDS | 70.0% | |
GCCTCCTCTTGCCGAGGGGT+TGG | + | chr2_1:25677000-25677019 | Msa0202830:CDS | 70.0% | |
CCCAACCCCTCGGCAAGAGG+AGG | - | chr2_1:25677004-25677023 | None:intergenic | 70.0% | |
CGGCTCCCTCGGCATGGAAG+GGG | + | chr2_1:25677758-25677777 | Msa0202830:CDS | 70.0% | |
CAGCAGCCCCTTCCATGCCG+AGG | - | chr2_1:25677767-25677786 | None:intergenic | 70.0% | |
CTCGGCATGGAAGGGGCTGC+TGG | + | chr2_1:25677765-25677784 | Msa0202830:CDS | 70.0% | |
GGGCCCAACCCCTCGGCAAG+AGG | - | chr2_1:25677007-25677026 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 25674156 | 25678955 | 25674156 | ID=Msa0202830;Name=Msa0202830 |
chr2_1 | mRNA | 25674156 | 25678955 | 25674156 | ID=Msa0202830-mRNA-1;Parent=Msa0202830;Name=Msa0202830-mRNA-1;_AED=0.04;_eAED=0.04;_QI=194|1|1|1|0.33|0.25|4|342|1235 |
chr2_1 | exon | 25674156 | 25674280 | 25674156 | ID=Msa0202830-mRNA-1:exon:9760;Parent=Msa0202830-mRNA-1 |
chr2_1 | exon | 25674361 | 25674426 | 25674361 | ID=Msa0202830-mRNA-1:exon:9761;Parent=Msa0202830-mRNA-1 |
chr2_1 | exon | 25674763 | 25677308 | 25674763 | ID=Msa0202830-mRNA-1:exon:9762;Parent=Msa0202830-mRNA-1 |
chr2_1 | exon | 25677449 | 25678955 | 25677449 | ID=Msa0202830-mRNA-1:exon:9763;Parent=Msa0202830-mRNA-1 |
chr2_1 | five_prime_UTR | 25674156 | 25674280 | 25674156 | ID=Msa0202830-mRNA-1:five_prime_utr;Parent=Msa0202830-mRNA-1 |
chr2_1 | five_prime_UTR | 25674361 | 25674426 | 25674361 | ID=Msa0202830-mRNA-1:five_prime_utr;Parent=Msa0202830-mRNA-1 |
chr2_1 | five_prime_UTR | 25674763 | 25674765 | 25674763 | ID=Msa0202830-mRNA-1:five_prime_utr;Parent=Msa0202830-mRNA-1 |
chr2_1 | CDS | 25674766 | 25677308 | 25674766 | ID=Msa0202830-mRNA-1:cds;Parent=Msa0202830-mRNA-1 |
chr2_1 | CDS | 25677449 | 25678613 | 25677449 | ID=Msa0202830-mRNA-1:cds;Parent=Msa0202830-mRNA-1 |
chr2_1 | three_prime_UTR | 25678614 | 25678955 | 25678614 | ID=Msa0202830-mRNA-1:three_prime_utr;Parent=Msa0202830-mRNA-1 |
Gene Sequence |
Protein sequence |