Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876860 | XP_013451336.1 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876860 | sp|O64937|EF1A_ORYSJ | 96.868 | 447 | 14 | 0 | 1 | 447 | 1 | 447 | 0.0 | 901 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876860 | A0A221C697 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0876860 | 0.825924 | 3.594628e-54 | -8.615850e-47 |
| Msa0005000 | Msa0876860 | 0.812450 | 4.212960e-51 | -8.615850e-47 |
| Msa0036370 | Msa0876860 | -0.807321 | 5.352480e-50 | -8.615850e-47 |
| Msa0072170 | Msa0876860 | -0.813452 | 2.541812e-51 | -8.615850e-47 |
| Msa0085720 | Msa0876860 | -0.813768 | 2.165352e-51 | -8.615850e-47 |
| Msa0090030 | Msa0876860 | -0.811471 | 6.887591e-51 | -8.615850e-47 |
| Msa0096940 | Msa0876860 | 0.819020 | 1.446130e-52 | -8.615850e-47 |
| Msa0098390 | Msa0876860 | 0.817113 | 3.902286e-52 | -8.615850e-47 |
| Msa0120540 | Msa0876860 | -0.818435 | 1.962771e-52 | -8.615850e-47 |
| Msa0609970 | Msa0876860 | -0.856923 | 2.316187e-62 | -8.615850e-47 |
| Msa0614990 | Msa0876860 | -0.818021 | 2.435981e-52 | -8.615850e-47 |
| Msa0622340 | Msa0876860 | -0.809443 | 1.887585e-50 | -8.615850e-47 |
| Msa0650620 | Msa0876860 | -0.831966 | 1.237052e-55 | -8.615850e-47 |
| Msa0653320 | Msa0876860 | 0.820885 | 5.414380e-53 | -8.615850e-47 |
| Msa0693790 | Msa0876860 | -0.837800 | 4.198276e-57 | -8.615850e-47 |
| Msa0721410 | Msa0876860 | -0.806582 | 7.670895e-50 | -8.615850e-47 |
| Msa0737800 | Msa0876860 | -0.803607 | 3.216409e-49 | -8.615850e-47 |
| Msa0747720 | Msa0876860 | 0.807711 | 4.422847e-50 | -8.615850e-47 |
| Msa0817260 | Msa0876860 | -0.829122 | 6.142069e-55 | -8.615850e-47 |
| Msa0817270 | Msa0876860 | -0.806469 | 8.101644e-50 | -8.615850e-47 |
| Msa0820530 | Msa0876860 | 0.822269 | 2.592504e-53 | -8.615850e-47 |
| Msa0140510 | Msa0876860 | 0.816826 | 4.526953e-52 | -8.615850e-47 |
| Msa0140520 | Msa0876860 | 0.830772 | 2.433014e-55 | -8.615850e-47 |
| Msa0144970 | Msa0876860 | 0.812409 | 4.301975e-51 | -8.615850e-47 |
| Msa0166950 | Msa0876860 | -0.803335 | 3.662351e-49 | -8.615850e-47 |
| Msa0173330 | Msa0876860 | -0.816212 | 6.211849e-52 | -8.615850e-47 |
| Msa0198940 | Msa0876860 | -0.823036 | 1.719057e-53 | -8.615850e-47 |
| Msa0210250 | Msa0876860 | -0.803469 | 3.434296e-49 | -8.615850e-47 |
| Msa0212750 | Msa0876860 | 0.862972 | 3.468599e-64 | -8.615850e-47 |
| Msa0223100 | Msa0876860 | -0.801611 | 8.297095e-49 | -8.615850e-47 |
| Msa0223290 | Msa0876860 | -0.808264 | 3.373229e-50 | -8.615850e-47 |
| Msa0227310 | Msa0876860 | 0.812454 | 4.205750e-51 | -8.615850e-47 |
| Msa0370310 | Msa0876860 | -0.800683 | 1.284639e-48 | -8.615850e-47 |
| Msa0370870 | Msa0876860 | -0.819099 | 1.387261e-52 | -8.615850e-47 |
| Msa0377530 | Msa0876860 | -0.837426 | 5.236264e-57 | -8.615850e-47 |
| Msa0388030 | Msa0876860 | 0.843884 | 1.064655e-58 | -8.615850e-47 |
| Msa0388040 | Msa0876860 | 0.811427 | 7.041122e-51 | -8.615850e-47 |
| Msa0403190 | Msa0876860 | -0.811240 | 7.728595e-51 | -8.615850e-47 |
| Msa0404700 | Msa0876860 | -0.841142 | 5.685987e-58 | -8.615850e-47 |
| Msa0419640 | Msa0876860 | 0.815155 | 1.068799e-51 | -8.615850e-47 |
| Msa0426810 | Msa0876860 | -0.872130 | 4.028359e-67 | -8.615850e-47 |
| Msa0439890 | Msa0876860 | -0.803774 | 2.968975e-49 | -8.615850e-47 |
| Msa0462540 | Msa0876860 | -0.822366 | 2.461835e-53 | -8.615850e-47 |
| Msa0464900 | Msa0876860 | -0.821810 | 3.313208e-53 | -8.615850e-47 |
| Msa0469910 | Msa0876860 | 0.801690 | 7.995234e-49 | -8.615850e-47 |
| Msa0239940 | Msa0876860 | -0.863257 | 2.832419e-64 | -8.615850e-47 |
| Msa0241740 | Msa0876860 | -0.833030 | 6.738953e-56 | -8.615850e-47 |
| Msa0250670 | Msa0876860 | -0.808390 | 3.170964e-50 | -8.615850e-47 |
| Msa0265230 | Msa0876860 | 0.809233 | 2.094217e-50 | -8.615850e-47 |
| Msa0266210 | Msa0876860 | -0.821914 | 3.133656e-53 | -8.615850e-47 |
| Msa0275400 | Msa0876860 | 0.814986 | 1.165092e-51 | -8.615850e-47 |
| Msa0287670 | Msa0876860 | -0.830334 | 3.114041e-55 | -8.615850e-47 |
| Msa0289400 | Msa0876860 | -0.828750 | 7.555887e-55 | -8.615850e-47 |
| Msa0295000 | Msa0876860 | 0.818593 | 1.807915e-52 | -8.615850e-47 |
| Msa0302650 | Msa0876860 | -0.832118 | 1.134435e-55 | -8.615850e-47 |
| Msa0308200 | Msa0876860 | -0.841860 | 3.677433e-58 | -8.615850e-47 |
| Msa0308220 | Msa0876860 | -0.861926 | 7.278175e-64 | -8.615850e-47 |
| Msa0312310 | Msa0876860 | -0.831436 | 1.671582e-55 | -8.615850e-47 |
| Msa0327410 | Msa0876860 | -0.818661 | 1.744811e-52 | -8.615850e-47 |
| Msa0362060 | Msa0876860 | -0.833049 | 6.666423e-56 | -8.615850e-47 |
| Msa0363170 | Msa0876860 | -0.845263 | 4.527976e-59 | -8.615850e-47 |
| Msa0505060 | Msa0876860 | -0.815090 | 1.104401e-51 | -8.615850e-47 |
| Msa0517490 | Msa0876860 | -0.818422 | 1.976744e-52 | -8.615850e-47 |
| Msa0524200 | Msa0876860 | 0.831368 | 1.737257e-55 | -8.615850e-47 |
| Msa0527980 | Msa0876860 | 0.800709 | 1.269303e-48 | -8.615850e-47 |
| Msa0534410 | Msa0876860 | -0.805740 | 1.153489e-49 | -8.615850e-47 |
| Msa0557950 | Msa0876860 | 0.807851 | 4.130370e-50 | -8.615850e-47 |
| Msa0590650 | Msa0876860 | -0.802611 | 5.167905e-49 | -8.615850e-47 |
| Msa0876860 | Msa0891600 | 0.836463 | 9.219957e-57 | -8.615850e-47 |
| Msa0876860 | Msa0908170 | -0.812045 | 5.164944e-51 | -8.615850e-47 |
| Msa0876860 | Msa0924150 | 0.811484 | 6.840025e-51 | -8.615850e-47 |
| Msa0876860 | Msa0930820 | -0.815451 | 9.185470e-52 | -8.615850e-47 |
| Msa0876860 | Msa0943270 | -0.801227 | 9.944763e-49 | -8.615850e-47 |
| Msa0876860 | Msa0944730 | -0.824190 | 9.231742e-54 | -8.615850e-47 |
| Msa0876860 | Msa0956520 | 0.850543 | 1.586812e-60 | -8.615850e-47 |
| Msa0876860 | Msa0959010 | -0.819888 | 9.169148e-53 | -8.615850e-47 |
| Msa0876860 | Msa0979120 | 0.974428 | 3.873547e-138 | -8.615850e-47 |
| Msa0876860 | Msa0982590 | -0.844608 | 6.803348e-59 | -8.615850e-47 |
| Msa0876860 | Msa0993530 | -0.810026 | 1.414273e-50 | -8.615850e-47 |
| Msa0876860 | Msa1038210 | 0.812030 | 5.204618e-51 | -8.615850e-47 |
| Msa0876860 | Msa1045450 | -0.818632 | 1.771762e-52 | -8.615850e-47 |
| Msa0876860 | Msa1048700 | -0.826685 | 2.369051e-54 | -8.615850e-47 |
| Msa0876860 | Msa1096550 | -0.800503 | 1.397738e-48 | -8.615850e-47 |
| Msa0876860 | Msa1174310 | -0.849859 | 2.467171e-60 | -8.615850e-47 |
| Msa0876860 | Msa1179020 | 0.813980 | 1.944488e-51 | -8.615850e-47 |
| Msa0876860 | Msa1182640 | -0.844706 | 6.401233e-59 | -8.615850e-47 |
| Msa0876860 | Msa1183770 | -0.811943 | 5.436571e-51 | -8.615850e-47 |
| Msa0876860 | Msa1218650 | -0.811546 | 6.632054e-51 | -8.615850e-47 |
| Msa0876860 | Msa1228770 | -0.806625 | 7.509640e-50 | -8.615850e-47 |
| Msa0876860 | Msa1229850 | -0.809323 | 2.002524e-50 | -8.615850e-47 |
| Msa0876860 | Msa1235020 | -0.813969 | 1.955130e-51 | -8.615850e-47 |
| Msa0876860 | Msa1236070 | 0.811464 | 6.909320e-51 | -8.615850e-47 |
| Msa0876860 | Msa1246530 | 0.837743 | 4.341348e-57 | -8.615850e-47 |
| Msa0876860 | Msa1272520 | -0.814463 | 1.521342e-51 | -8.615850e-47 |
| Msa0876860 | Msa1300860 | -0.800404 | 1.464523e-48 | -8.615850e-47 |
| Msa0876860 | Msa1310660 | -0.844238 | 8.556345e-59 | -8.615850e-47 |
| Msa0876860 | Msa1314770 | -0.833067 | 6.599425e-56 | -8.615850e-47 |
| Msa0876860 | Msa1330890 | 0.812910 | 3.341952e-51 | -8.615850e-47 |
| Msa0876860 | Msa1337730 | -0.817613 | 3.011353e-52 | -8.615850e-47 |
| Msa0876860 | Msa1350690 | -0.829060 | 6.356968e-55 | -8.615850e-47 |
| Msa0876860 | Msa1360280 | -0.811146 | 8.100774e-51 | -8.615850e-47 |
| Msa0876860 | Msa1363700 | -0.808662 | 2.774072e-50 | -8.615850e-47 |
| Msa0876860 | Msa1367390 | 0.824702 | 6.994660e-54 | -8.615850e-47 |
| Msa0876860 | Msa1398860 | -0.821837 | 3.264648e-53 | -8.615850e-47 |
| Msa0876860 | Msa1417810 | 0.823357 | 1.446512e-53 | -8.615850e-47 |
| Msa0876860 | Msa1439230 | -0.802301 | 5.988057e-49 | -8.615850e-47 |
| Msa0876860 | Msa1442220 | 0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0876860 | Msa1445400 | 0.824477 | 7.902598e-54 | -8.615850e-47 |
| Msa0876860 | Msa1449350 | 0.828229 | 1.009682e-54 | -8.615850e-47 |
| Msa0876860 | Msa1458030 | -0.800415 | 1.456758e-48 | -8.615850e-47 |
| Msa0876860 | Msa1459760 | 0.807777 | 4.283367e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876860 | MtrunA17_Chr6g0458111 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| Msa0876860 | MtrunA17_Chr6g0458091 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| Msa0876860 | MtrunA17_Chr1g0200071 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| Msa0876860 | MtrunA17_Chr1g0200091 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| Msa0876860 | MtrunA17_Chr1g0200121 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| Msa0876860 | MtrunA17_Chr4g0005781 | 95.302 | 447 | 21 | 0 | 1 | 447 | 1 | 447 | 0.0 | 891 |
| Msa0876860 | MtrunA17_Chr1g0150331 | 88.470 | 451 | 22 | 3 | 1 | 447 | 1 | 425 | 0.0 | 805 |
| Msa0876860 | MtrunA17_Chr1g0193591 | 81.336 | 434 | 81 | 0 | 1 | 434 | 1 | 434 | 0.0 | 739 |
| Msa0876860 | MtrunA17_Chr1g0204031 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 726 |
| Msa0876860 | MtrunA17_Chr1g0156421 | 78.802 | 434 | 92 | 0 | 1 | 434 | 1 | 434 | 0.0 | 724 |
| Msa0876860 | MtrunA17_Chr8g0340771 | 77.951 | 449 | 96 | 2 | 1 | 446 | 1 | 449 | 0.0 | 713 |
| Msa0876860 | MtrunA17_Chr5g0415391 | 71.537 | 397 | 113 | 0 | 39 | 435 | 1 | 397 | 0.0 | 591 |
| Msa0876860 | MtrunA17_Chr1g0196251 | 67.990 | 403 | 101 | 2 | 4 | 405 | 5 | 380 | 0.0 | 569 |
| Msa0876860 | MtrunA17_Chr8g0336511 | 78.287 | 327 | 70 | 1 | 1 | 326 | 66 | 392 | 0.0 | 541 |
| Msa0876860 | MtrunA17_Chr2g0319341 | 71.681 | 339 | 94 | 1 | 102 | 438 | 1 | 339 | 2.96e-180 | 510 |
| Msa0876860 | MtrunA17_Chr2g0298371 | 67.692 | 325 | 86 | 2 | 102 | 424 | 1 | 308 | 4.07e-159 | 452 |
| Msa0876860 | MtrunA17_Chr8g0340371 | 69.710 | 241 | 70 | 2 | 1 | 240 | 1 | 239 | 6.97e-118 | 344 |
| Msa0876860 | MtrunA17_Chr1g0210931 | 60.403 | 298 | 63 | 4 | 155 | 446 | 1 | 249 | 3.18e-114 | 335 |
| Msa0876860 | MtrunA17_Chr2g0318291 | 71.681 | 226 | 59 | 3 | 1 | 223 | 1 | 224 | 1.40e-112 | 330 |
| Msa0876860 | MtrunA17_Chr6g0483121 | 37.731 | 432 | 255 | 6 | 5 | 428 | 89 | 514 | 9.51e-97 | 300 |
| Msa0876860 | MtrunA17_Chr8g0392641 | 37.731 | 432 | 259 | 6 | 4 | 429 | 143 | 570 | 6.50e-92 | 289 |
| Msa0876860 | MtrunA17_Chr1g0204041 | 85.806 | 155 | 22 | 0 | 1 | 155 | 1 | 155 | 1.58e-90 | 272 |
| Msa0876860 | MtrunA17_Chr8g0380091 | 35.566 | 433 | 270 | 6 | 7 | 433 | 275 | 704 | 1.60e-90 | 289 |
| Msa0876860 | MtrunA17_Chr1g0200111 | 74.011 | 177 | 36 | 1 | 264 | 430 | 1 | 177 | 1.03e-85 | 259 |
| Msa0876860 | MtrunA17_Chr2g0318281 | 67.368 | 190 | 62 | 0 | 243 | 432 | 5 | 194 | 4.93e-83 | 254 |
| Msa0876860 | MtrunA17_Chr1g0156411 | 81.884 | 138 | 25 | 0 | 8 | 145 | 12 | 149 | 1.52e-78 | 240 |
| Msa0876860 | MtrunA17_Chr8g0340361 | 58.378 | 185 | 61 | 2 | 264 | 433 | 1 | 184 | 1.04e-64 | 206 |
| Msa0876860 | MtrunA17_Chr4g0026961 | 53.608 | 194 | 74 | 4 | 195 | 385 | 32 | 212 | 1.19e-57 | 189 |
| Msa0876860 | MtrunA17_Chr4g0026961 | 78.571 | 42 | 9 | 0 | 1 | 42 | 1 | 42 | 3.47e-13 | 68.6 |
| Msa0876860 | MtrunA17_Chr2g0298381 | 77.778 | 99 | 22 | 0 | 1 | 99 | 1 | 99 | 7.03e-48 | 159 |
| Msa0876860 | MtrunA17_Chr8g0341021 | 75.490 | 102 | 25 | 0 | 3 | 104 | 4 | 105 | 1.99e-47 | 158 |
| Msa0876860 | MtrunA17_Chr7g0259481 | 30.227 | 440 | 243 | 14 | 3 | 429 | 59 | 447 | 1.30e-45 | 164 |
| Msa0876860 | MtrunA17_Chr3g0116821 | 30.631 | 444 | 247 | 15 | 3 | 429 | 88 | 487 | 4.06e-42 | 155 |
| Msa0876860 | MtrunA17_Chr1g0211481 | 78.481 | 79 | 17 | 0 | 5 | 83 | 4 | 82 | 6.12e-36 | 128 |
| Msa0876860 | MtrunA17_Chr2g0319351 | 80.822 | 73 | 14 | 0 | 5 | 77 | 5 | 77 | 7.07e-35 | 124 |
| Msa0876860 | MtrunA17_Chr1g0200101 | 72.414 | 87 | 18 | 2 | 154 | 236 | 29 | 113 | 1.32e-34 | 125 |
| Msa0876860 | MtrunA17_Chr1g0200101 | 73.469 | 49 | 13 | 0 | 21 | 69 | 2 | 50 | 8.51e-17 | 76.3 |
| Msa0876860 | MtrunA17_Chr2g0287231 | 32.389 | 247 | 135 | 6 | 1 | 244 | 10 | 227 | 5.11e-31 | 119 |
| Msa0876860 | MtrunA17_Chr8g0341041 | 35.455 | 220 | 79 | 5 | 213 | 432 | 2 | 158 | 1.00e-28 | 110 |
| Msa0876860 | MtrunA17_Chr7g0261801 | 69.697 | 66 | 17 | 1 | 155 | 220 | 1 | 63 | 4.19e-24 | 95.5 |
| Msa0876860 | MtrunA17_Chr3g0130991 | 26.103 | 272 | 144 | 9 | 9 | 272 | 85 | 307 | 2.23e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876860 | AT1G07920.1 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT1G07940.4 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT1G07940.1 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT1G07940.2 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT1G07940.3 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT5G60390.3 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT5G60390.1 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT5G60390.2 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT1G07930.1 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| Msa0876860 | AT1G07930.2 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
| Msa0876860 | AT1G07930.2 | 90.517 | 116 | 11 | 0 | 331 | 446 | 254 | 369 | 1.84e-68 | 223 |
| Msa0876860 | AT1G18070.1 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.81e-94 | 293 |
| Msa0876860 | AT1G18070.2 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.81e-94 | 293 |
| Msa0876860 | AT1G18070.3 | 36.697 | 436 | 257 | 6 | 5 | 424 | 99 | 531 | 1.07e-90 | 285 |
| Msa0876860 | AT5G10630.1 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.90e-90 | 288 |
| Msa0876860 | AT5G10630.5 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.94e-90 | 288 |
| Msa0876860 | AT5G10630.2 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.94e-90 | 288 |
| Msa0876860 | AT5G10630.3 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 1.01e-89 | 288 |
| Msa0876860 | AT5G10630.4 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.14e-89 | 288 |
| Msa0876860 | AT1G35550.1 | 77.885 | 104 | 23 | 0 | 335 | 438 | 1 | 104 | 5.74e-54 | 176 |
| Msa0876860 | AT4G20360.1 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.30e-44 | 162 |
| Msa0876860 | AT4G20360.2 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.30e-44 | 162 |
| Msa0876860 | AT4G02930.1 | 29.977 | 437 | 249 | 13 | 3 | 429 | 63 | 452 | 2.06e-44 | 161 |
| Msa0876860 | AT2G31060.3 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 1.61e-12 | 70.1 |
| Msa0876860 | AT2G31060.2 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 2.26e-11 | 66.6 |
| Msa0876860 | AT5G08650.1 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.47e-11 | 66.2 |
| Msa0876860 | AT5G08650.2 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.74e-11 | 66.2 |
Find 153 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCGGTATGGTTGTGACTTT+TGG | 0.190241 | 6_1:+15377304 | Msa0876860:CDS |
| GGCTTGTCTGTGGGTCTCTT+TGG | 0.228629 | 6_1:-15377196 | None:intergenic |
| GTTGTGACATTACTTCTTCT+TGG | 0.266998 | 6_1:-15377851 | None:intergenic |
| TTTCTATAGGCAGCTATATA+AGG | 0.276105 | 6_1:+15378080 | Msa0876860:three_prime_UTR |
| GGTTTGATAATTTATGTCTA+TGG | 0.286823 | 6_1:+15378201 | Msa0876860:three_prime_UTR |
| GCTCTCACTGAAGCTCTTCC+AGG | 0.343392 | 6_1:+15377376 | Msa0876860:CDS |
| GTCTCTTTGGCTCGTTGATC+TGG | 0.343863 | 6_1:-15377183 | None:intergenic |
| TTGCAAGATGTTTACAAGAT+TGG | 0.346171 | 6_1:+15377232 | Msa0876860:CDS |
| CATATCAACATTGTCGTCAT+TGG | 0.354281 | 6_1:+15376274 | Msa0876860:CDS |
| TGCAGCTAAACTTACAGAAC+TGG | 0.361784 | 6_1:+15377971 | Msa0876860:three_prime_UTR |
| GTTTACAAGATTGGTGGTAT+TGG | 0.363154 | 6_1:+15377241 | Msa0876860:CDS |
| CTTCTTCTTGGCAGCAGCCT+TGG | 0.371495 | 6_1:-15377839 | None:intergenic |
| AGAGAGAGACTGAGTGATAA+AGG | 0.376933 | 6_1:-15374747 | None:intergenic |
| AAGTTGGCAGCTTCCTTGGC+AGG | 0.382611 | 6_1:-15377481 | None:intergenic |
| GCTCTTCTTGCATTTACTCT+TGG | 0.389052 | 6_1:+15376664 | Msa0876860:CDS |
| AGTGAAGTTGGCAGCTTCCT+TGG | 0.410082 | 6_1:-15377485 | None:intergenic |
| ACCTGGCCTTCGAGTACTTA+GGG | 0.418829 | 6_1:-15376997 | None:intergenic |
| ACCAGATCGCCTGTCAATCT+TGG | 0.419719 | 6_1:-15377614 | None:intergenic |
| TTCCTTGGCAGGGTCATCCT+TGG | 0.427055 | 6_1:-15377470 | None:intergenic |
| ATACCTCAGCTGAAACGAAA+TGG | 0.429887 | 6_1:-15374801 | None:intergenic |
| GTTCCCATCTCCGGATTTGA+AGG | 0.431146 | 6_1:+15377091 | Msa0876860:CDS |
| AAGCCTGAGGGGCTTGTCTG+TGG | 0.432212 | 6_1:-15377206 | None:intergenic |
| TCTGGAAAATCAACAACAAC+TGG | 0.436226 | 6_1:+15376307 | Msa0876860:CDS |
| AGCCTGAGGGGCTTGTCTGT+GGG | 0.440652 | 6_1:-15377205 | None:intergenic |
| ATGGGTTCTTGACAAACTTA+AGG | 0.442151 | 6_1:+15376426 | Msa0876860:CDS |
| CATGTTGTCACCTTCAAATC+CGG | 0.442623 | 6_1:-15377101 | None:intergenic |
| TATCCGTTTCCGATCTGTCC+AGG | 0.445786 | 6_1:-15377532 | None:intergenic |
| CCGGTCTCAACACGTCCAAC+TGG | 0.449484 | 6_1:-15377271 | None:intergenic |
| ATTCCCTTCGTTCCCATCTC+CGG | 0.450165 | 6_1:+15377082 | Msa0876860:CDS |
| GGCAGGGTCATCCTTGGAGT+TGG | 0.452433 | 6_1:-15377464 | None:intergenic |
| TTCATCAAGAACATGATTAC+CGG | 0.453588 | 6_1:+15376547 | Msa0876860:CDS |
| CTTATCATTGACTCCACCAC+TGG | 0.461752 | 6_1:+15376595 | Msa0876860:CDS |
| ATGGAAGGTTGTTACTCGTT+CGG | 0.464368 | 6_1:-15374782 | None:intergenic |
| GGTCTCAACCACCATGGGCT+TGG | 0.466910 | 6_1:-15377704 | None:intergenic |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 6_1:-15377701 | None:intergenic |
| ACAATCAGCCTGGGAGGTTC+CGG | 0.469113 | 6_1:-15376566 | None:intergenic |
| ACCAAGATTGACAGGCGATC+TGG | 0.474566 | 6_1:+15377613 | Msa0876860:CDS |
| CAAGATGTTTACAAGATTGG+TGG | 0.475647 | 6_1:+15377235 | Msa0876860:CDS |
| TAAGAACAGCACAATCAGCC+TGG | 0.478298 | 6_1:-15376576 | None:intergenic |
| CTTCACGATTTCATCGTACC+TGG | 0.484982 | 6_1:-15377014 | None:intergenic |
| CTTAAGGCTGAGCGTGAAAG+AGG | 0.490014 | 6_1:+15376442 | Msa0876860:CDS |
| GTCATTGGACATGTCGACTC+TGG | 0.490675 | 6_1:+15376289 | Msa0876860:CDS |
| TCAGTCTCTCTCTGCGGCTG+AGG | 0.491965 | 6_1:+15374757 | Msa0876860:five_prime_UTR |
| CACCCTGGACAGATCGGAAA+CGG | 0.491987 | 6_1:+15377529 | Msa0876860:CDS |
| GTCACCTTCAAATCCGGAGA+TGG | 0.495769 | 6_1:-15377095 | None:intergenic |
| AGTTTCATCCTACTTGAAGA+AGG | 0.496964 | 6_1:+15377039 | Msa0876860:CDS |
| TCCAAAAGTCACAACCATAC+CGG | 0.497778 | 6_1:-15377305 | None:intergenic |
| AATTGCAGTTTAAGACATCA+TGG | 0.500445 | 6_1:+15376237 | Msa0876860:intron |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.501366 | 6_1:+15377795 | Msa0876860:CDS |
| CACCAACCTTGACTGGTACA+AGG | 0.502465 | 6_1:+15377135 | Msa0876860:CDS |
| TCATCCTACTTGAAGAAGGT+TGG | 0.505639 | 6_1:+15377043 | Msa0876860:CDS |
| AACTTGTTACCAAGATTGAC+AGG | 0.511236 | 6_1:+15377605 | Msa0876860:CDS |
| GACCCACAGACAAGCCCCTC+AGG | 0.515484 | 6_1:+15377203 | Msa0876860:CDS |
| TACAGAACTGGGTTCTTGAT+CGG | 0.517099 | 6_1:+15377983 | Msa0876860:three_prime_UTR |
| GAGCCTAAGTTCTTGAAGAA+TGG | 0.517492 | 6_1:+15377652 | Msa0876860:CDS |
| GATTGACAGGCGATCTGGTA+AGG | 0.518046 | 6_1:+15377618 | Msa0876860:CDS |
| CTTGTACCAGTCAAGGTTGG+TGG | 0.518944 | 6_1:-15377134 | None:intergenic |
| TACCTGGCCTTCGAGTACTT+AGG | 0.520657 | 6_1:-15376998 | None:intergenic |
| ATCATTGACTCCACCACTGG+TGG | 0.521304 | 6_1:+15376598 | Msa0876860:CDS |
| AGAGGTCCACCAACCTTGAC+TGG | 0.523105 | 6_1:+15377128 | Msa0876860:CDS |
| TCACCATTCTTCAAGAACTT+AGG | 0.524504 | 6_1:-15377655 | None:intergenic |
| TTGAATCCGACATTGTCTCC+TGG | 0.526013 | 6_1:-15377394 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.529820 | 6_1:-15377700 | None:intergenic |
| CTTCCATTTCGTTTCAGCTG+AGG | 0.534419 | 6_1:+15374798 | Msa0876860:five_prime_UTR |
| AGCGTTCATTCAAGTACGCA+TGG | 0.534658 | 6_1:+15376407 | Msa0876860:CDS |
| GTGGAGAAGAAGGATCCTAC+TGG | 0.535855 | 6_1:+15377805 | Msa0876860:CDS |
| CCAAAAGTCACAACCATACC+GGG | 0.540748 | 6_1:-15377304 | None:intergenic |
| ACTGGGTTCTTGATCGGCGA+TGG | 0.543939 | 6_1:+15377989 | Msa0876860:three_prime_UTR |
| GATGACTTGGGAAGTGAAGT+TGG | 0.546093 | 6_1:-15377497 | None:intergenic |
| TCCCTTGTACCAGTCAAGGT+TGG | 0.546130 | 6_1:-15377137 | None:intergenic |
| ATGCAAGAAGAGCGTGCTCA+CGG | 0.549857 | 6_1:-15376654 | None:intergenic |
| GAAGGATCCTACTGGAGCTA+AGG | 0.552001 | 6_1:+15377813 | Msa0876860:CDS |
| CCCCTAAGTACTCGAAGGCC+AGG | 0.553487 | 6_1:+15376996 | Msa0876860:CDS |
| TTCTTGAAGAATGGTGATGC+TGG | 0.554703 | 6_1:+15377661 | Msa0876860:CDS |
| TGCACAGTCATTGATGCACC+TGG | 0.556287 | 6_1:+15376514 | Msa0876860:CDS |
| ATCTTGCAATGGAAGCCTGA+GGG | 0.556985 | 6_1:-15377218 | None:intergenic |
| TGTTGCTGTTGGTGTCATCA+AGG | 0.557300 | 6_1:+15377780 | Msa0876860:CDS |
| TCACCTTCAAATCCGGAGAT+GGG | 0.557788 | 6_1:-15377094 | None:intergenic |
| CATACCGGGCTTCACAATAC+CGG | 0.558131 | 6_1:-15377290 | None:intergenic |
| ACCAACCTTGACTGGTACAA+GGG | 0.559612 | 6_1:+15377136 | Msa0876860:CDS |
| TTGATGAAATCACGATGTCC+AGG | 0.561637 | 6_1:-15376532 | None:intergenic |
| CATGATTACCGGAACCTCCC+AGG | 0.562564 | 6_1:+15376558 | Msa0876860:CDS |
| GTAACCAACCTTCTTCAAGT+AGG | 0.562921 | 6_1:-15377047 | None:intergenic |
| GCGAAGGTCTCAACCACCAT+GGG | 0.563446 | 6_1:-15377709 | None:intergenic |
| AGTTGGCAGCTTCCTTGGCA+GGG | 0.564600 | 6_1:-15377480 | None:intergenic |
| GGTGGTTCATGATGATGACT+TGG | 0.569890 | 6_1:-15377510 | None:intergenic |
| AGCTTCAAAACCACCAGTGG+TGG | 0.571917 | 6_1:-15376608 | None:intergenic |
| TTGGTCCCTTGTACCAGTCA+AGG | 0.575920 | 6_1:-15377141 | None:intergenic |
| AACTTCAGTTGTCAATCCAG+TGG | 0.577026 | 6_1:-15377329 | None:intergenic |
| GACTGTGCAGTAGTACTTGG+TGG | 0.578462 | 6_1:-15376500 | None:intergenic |
| TGCAAGAAGAGCGTGCTCAC+GGG | 0.579779 | 6_1:-15376653 | None:intergenic |
| TGTTAAGAATGTTGCTGTGA+AGG | 0.579878 | 6_1:+15377417 | Msa0876860:CDS |
| ATGAACCACCCTGGACAGAT+CGG | 0.581582 | 6_1:+15377523 | Msa0876860:CDS |
| TCAAGAGCCTCAAGAAGAGT+TGG | 0.584894 | 6_1:-15377160 | None:intergenic |
| ATCCGTTTCCGATCTGTCCA+GGG | 0.587827 | 6_1:-15377531 | None:intergenic |
| TTCGCTGAATATCCTCCACT+TGG | 0.588646 | 6_1:+15377727 | Msa0876860:CDS |
| AATGACTGTGCAGTAGTACT+TGG | 0.591989 | 6_1:-15376503 | None:intergenic |
| GAAGCTGGTATCTCTAAGGA+TGG | 0.592030 | 6_1:+15376625 | Msa0876860:CDS |
| CCAGTTGGACGTGTTGAGAC+CGG | 0.592088 | 6_1:+15377271 | Msa0876860:CDS |
| ATCTTGTAAACATCTTGCAA+TGG | 0.592677 | 6_1:-15377229 | None:intergenic |
| ATTGCAGTTTAAGACATCAT+GGG | 0.594857 | 6_1:+15376238 | Msa0876860:intron |
| ACTTCAGTTGTCAATCCAGT+GGG | 0.599610 | 6_1:-15377328 | None:intergenic |
| GAGGTGTGGCAATCAAGCAC+TGG | 0.600600 | 6_1:-15377559 | None:intergenic |
| GGTCACTTGATCTACAAGCT+AGG | 0.604596 | 6_1:+15376328 | Msa0876860:CDS |
| TTTCCACAAGGCAATATCGA+TGG | 0.606438 | 6_1:-15376470 | None:intergenic |
| AAGAACAGCACAATCAGCCT+GGG | 0.607202 | 6_1:-15376575 | None:intergenic |
| TGTTGGTGTCATCAAGGCTG+TGG | 0.608422 | 6_1:+15377786 | Msa0876860:CDS |
| AAATCCGGAGATGGGAACGA+AGG | 0.610633 | 6_1:-15377086 | None:intergenic |
| GATGGTTCCCACCAAGCCCA+TGG | 0.611182 | 6_1:+15377693 | Msa0876860:CDS |
| AATCCGGAGATGGGAACGAA+GGG | 0.611560 | 6_1:-15377085 | None:intergenic |
| GCGTTCATTCAAGTACGCAT+GGG | 0.615188 | 6_1:+15376408 | Msa0876860:CDS |
| CTCCAAGGATGACCCTGCCA+AGG | 0.619064 | 6_1:+15377468 | Msa0876860:CDS |
| ATGCGTCAAACTGTTGCTGT+TGG | 0.619748 | 6_1:+15377769 | Msa0876860:CDS |
| AGCGAAGGTCTCAACCACCA+TGG | 0.623872 | 6_1:-15377710 | None:intergenic |
| AAGGTGACAACATGATTGAG+AGG | 0.624581 | 6_1:+15377110 | Msa0876860:CDS |
| GAGACCGGTATTGTGAAGCC+CGG | 0.625104 | 6_1:+15377286 | Msa0876860:CDS |
| CTCAGCTGAAACGAAATGGA+AGG | 0.630534 | 6_1:-15374797 | None:intergenic |
| TCTTGCAATGGAAGCCTGAG+GGG | 0.631058 | 6_1:-15377217 | None:intergenic |
| CAAGGGACCAACTCTTCTTG+AGG | 0.634066 | 6_1:+15377153 | Msa0876860:CDS |
| ATCTGGTAAGGAGATTGAGA+AGG | 0.634092 | 6_1:+15377630 | Msa0876860:CDS |
| GATGATCTGTTGTTGTAACA+AGG | 0.635291 | 6_1:+15376696 | Msa0876860:CDS |
| GTCATCATCATGAACCACCC+TGG | 0.635348 | 6_1:+15377514 | Msa0876860:CDS |
| TGATGCTGGTATCATTAAGA+TGG | 0.636151 | 6_1:+15377675 | Msa0876860:CDS |
| TGTGATCGAGAGATTCGAGA+AGG | 0.638590 | 6_1:+15376366 | Msa0876860:CDS |
| GCAGCTAAACTTACAGAACT+GGG | 0.640637 | 6_1:+15377972 | Msa0876860:three_prime_UTR |
| CCTGGCCTTCGAGTACTTAG+GGG | 0.644615 | 6_1:-15376996 | None:intergenic |
| CACTTGATCTACAAGCTAGG+AGG | 0.645428 | 6_1:+15376331 | Msa0876860:CDS |
| TTACCATCGATATTGCCTTG+TGG | 0.647445 | 6_1:+15376467 | Msa0876860:CDS |
| TACTGGAGCTAAGGTCACCA+AGG | 0.647527 | 6_1:+15377822 | Msa0876860:CDS |
| GGTATTGGAACTGTGCCAGT+TGG | 0.649080 | 6_1:+15377256 | Msa0876860:CDS |
| GCTCTTCCAGGAGACAATGT+CGG | 0.651488 | 6_1:+15377388 | Msa0876860:CDS |
| TTTCGTAGCATCCAACTCCA+AGG | 0.653237 | 6_1:+15377453 | Msa0876860:CDS |
| AAACTTCACAGCAATGTGAG+AGG | 0.653594 | 6_1:-15377578 | None:intergenic |
| AACAGCACAATCAGCCTGGG+AGG | 0.653730 | 6_1:-15376572 | None:intergenic |
| CATCTTGCAATGGAAGCCTG+AGG | 0.654491 | 6_1:-15377219 | None:intergenic |
| ACAGCAAAACGTCCAAGTGG+AGG | 0.656142 | 6_1:-15377739 | None:intergenic |
| GGCCTTCGAGTACTTAGGGG+TGG | 0.657553 | 6_1:-15376993 | None:intergenic |
| CAGGTACGATGAAATCGTGA+AGG | 0.661162 | 6_1:+15377015 | Msa0876860:CDS |
| TTGGTGACCTTAGCTCCAGT+AGG | 0.661771 | 6_1:-15377820 | None:intergenic |
| ACCAGCTTCAAAACCACCAG+TGG | 0.669846 | 6_1:-15376611 | None:intergenic |
| TCACAGCAATGTGAGAGGTG+TGG | 0.670228 | 6_1:-15377573 | None:intergenic |
| AAGTGGAGGATATTCAGCGA+AGG | 0.673733 | 6_1:-15377725 | None:intergenic |
| CGTTTCCGATCTGTCCAGGG+TGG | 0.684114 | 6_1:-15377528 | None:intergenic |
| CTGACAGCAAAACGTCCAAG+TGG | 0.689307 | 6_1:-15377742 | None:intergenic |
| GTGGTTCATGATGATGACTT+GGG | 0.690284 | 6_1:-15377509 | None:intergenic |
| TACCACCCCTAAGTACTCGA+AGG | 0.691722 | 6_1:+15376991 | Msa0876860:CDS |
| GGTGGTCTCAAATTTCCACA+AGG | 0.697133 | 6_1:-15376482 | None:intergenic |
| GTCTGTTGAGATGCACCACG+AGG | 0.705830 | 6_1:+15377354 | Msa0876860:CDS |
| GCTGTGAAGGATCTCAAGCG+TGG | 0.706441 | 6_1:+15377430 | Msa0876860:CDS |
| GAAGAAGTAATGTCACAACA+TGG | 0.716232 | 6_1:+15377855 | Msa0876860:exon |
| GGTTCCCACCAAGCCCATGG+TGG | 0.716413 | 6_1:+15377696 | Msa0876860:CDS |
| TATCACTCAGTCTCTCTCTG+CGG | 0.724565 | 6_1:+15374751 | Msa0876860:five_prime_UTR |
| GAGCTTCAGTGAGAGCCTCG+TGG | 0.728674 | 6_1:-15377369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTTAATTAGATGTTTAAT+TGG | + | chr6_1:15375368-15375387 | Msa0876860:intron | 15.0% |
| !! | TAAATCAGTATCAATTATAT+TGG | + | chr6_1:15375743-15375762 | Msa0876860:intron | 15.0% |
| !!! | TTGATTAAATCTTATTTTCT+TGG | + | chr6_1:15376048-15376067 | Msa0876860:intron | 15.0% |
| !! | TCATAATGTTGTATGTTAAT+TGG | + | chr6_1:15375106-15375125 | Msa0876860:intron | 20.0% |
| !!! | TTCATGATGATTTTTGAAAT+TGG | + | chr6_1:15375196-15375215 | Msa0876860:intron | 20.0% |
| !!! | TTGTTTTGTTGTTAATGATT+TGG | + | chr6_1:15375286-15375305 | Msa0876860:intron | 20.0% |
| !! | CTGTTTGATTATATCTTAAT+TGG | + | chr6_1:15375314-15375333 | Msa0876860:intron | 20.0% |
| !! | AATTAGATGTTTAATTGGTT+AGG | + | chr6_1:15375373-15375392 | Msa0876860:intron | 20.0% |
| !!! | TTTTTTTGAACTTGATGATT+TGG | + | chr6_1:15375400-15375419 | Msa0876860:intron | 20.0% |
| !! | CTATTTGATTAGATCTTAAT+TGG | + | chr6_1:15375428-15375447 | Msa0876860:intron | 20.0% |
| !!! | TGATTTTGAACTTTATGATT+TGG | + | chr6_1:15375587-15375606 | Msa0876860:intron | 20.0% |
| !! | AACTGTTAACATTACATTAA+AGG | - | chr6_1:15375671-15375690 | None:intergenic | 20.0% |
| !!! | TTTCAATATTTTGTTTCAGA+TGG | + | chr6_1:15376964-15376983 | Msa0876860:intron | 20.0% |
| !! | CAAAAACTTGAAAATAAAAC+TGG | - | chr6_1:15377942-15377961 | None:intergenic | 20.0% |
| !!! | TGTCGTTCATTTTTATAATT+TGG | + | chr6_1:15378180-15378199 | Msa0876860:three_prime_UTR | 20.0% |
| !!! | GCTTTTTTCATGATTTTGTT+CGG | + | chr6_1:15374894-15374913 | Msa0876860:intron | 25.0% |
| !!! | TTTGTTGTTGTTCGTTTATT+TGG | + | chr6_1:15374967-15374986 | Msa0876860:intron | 25.0% |
| ! | TGTTCGTTTATTTGGTTAAA+AGG | + | chr6_1:15374975-15374994 | Msa0876860:intron | 25.0% |
| ! | GTTCGTTTATTTGGTTAAAA+GGG | + | chr6_1:15374976-15374995 | Msa0876860:intron | 25.0% |
| ! | AGAAACTGTAACAAATAAAC+AGG | - | chr6_1:15375034-15375053 | None:intergenic | 25.0% |
| !!! | TGATTTTGAACTTGATGATT+TGG | + | chr6_1:15375487-15375506 | Msa0876860:intron | 25.0% |
| !!! | TGATTTGGTTAATCTGTAAT+TGG | + | chr6_1:15375502-15375521 | Msa0876860:intron | 25.0% |
| ! | CTGTTTGATTAGATCTTAAT+TGG | + | chr6_1:15375615-15375634 | Msa0876860:intron | 25.0% |
| !!! | TTGTTGCTTTTCTATTAGAT+TGG | + | chr6_1:15375773-15375792 | Msa0876860:intron | 25.0% |
| !! | TGTCTTGAAATGATTTTGTT+AGG | + | chr6_1:15375831-15375850 | Msa0876860:intron | 25.0% |
| !! | GTCTTGAAATGATTTTGTTA+GGG | + | chr6_1:15375832-15375851 | Msa0876860:intron | 25.0% |
| ATAGATCGAATCAAAGAGAA+AGG | - | chr6_1:15374839-15374858 | None:intergenic | 30.0% | |
| CTGATTTATTAGATCTTGCA+TGG | - | chr6_1:15375731-15375750 | None:intergenic | 30.0% | |
| ! | TCTATTAGATTGGTTCATTG+AGG | + | chr6_1:15375783-15375802 | Msa0876860:intron | 30.0% |
| ! | CTATTAGATTGGTTCATTGA+GGG | + | chr6_1:15375784-15375803 | Msa0876860:intron | 30.0% |
| CGAATTATTCTGCTCAATTA+AGG | + | chr6_1:15376017-15376036 | Msa0876860:intron | 30.0% | |
| !! | CTGATTTGTTGTTTGCTTAT+TGG | + | chr6_1:15376073-15376092 | Msa0876860:intron | 30.0% |
| ! | TGTGTTATTAACATGAGTTC+TGG | + | chr6_1:15376116-15376135 | Msa0876860:intron | 30.0% |
| ! | AATTGCAGTTTAAGACATCA+TGG | + | chr6_1:15376237-15376256 | Msa0876860:intron | 30.0% |
| ! | ATTGCAGTTTAAGACATCAT+GGG | + | chr6_1:15376238-15376257 | Msa0876860:intron | 30.0% |
| TTCATCAAGAACATGATTAC+CGG | + | chr6_1:15376547-15376566 | Msa0876860:CDS | 30.0% | |
| ! | TACTAAATATGTTGAGTTGC+AGG | + | chr6_1:15376764-15376783 | Msa0876860:intron | 30.0% |
| !! | TTATTTGCTGATTCTGACTT+TGG | + | chr6_1:15376852-15376871 | Msa0876860:intron | 30.0% |
| ATCTTGTAAACATCTTGCAA+TGG | - | chr6_1:15377232-15377251 | None:intergenic | 30.0% | |
| TTGCAAGATGTTTACAAGAT+TGG | + | chr6_1:15377232-15377251 | Msa0876860:CDS | 30.0% | |
| ! | TCGAGAACTTCATTTTCTAT+AGG | + | chr6_1:15378067-15378086 | Msa0876860:three_prime_UTR | 30.0% |
| TTTCTATAGGCAGCTATATA+AGG | + | chr6_1:15378080-15378099 | Msa0876860:three_prime_UTR | 30.0% | |
| TAAAAATGAACGACAGAAAC+AGG | - | chr6_1:15378175-15378194 | None:intergenic | 30.0% | |
| ! | TGATAACGTTGATGAAAGTG+AGG | + | chr6_1:15375244-15375263 | Msa0876860:intron | 35.0% |
| ! | GATAACGTTGATGAAAGTGA+GGG | + | chr6_1:15375245-15375264 | Msa0876860:intron | 35.0% |
| !! | GCTGATTTTGAACTTGATGT+AGG | - | chr6_1:15375704-15375723 | None:intergenic | 35.0% |
| TGAGCAGAATAATTCGTCAA+TGG | - | chr6_1:15376013-15376032 | None:intergenic | 35.0% | |
| CATATCAACATTGTCGTCAT+TGG | + | chr6_1:15376274-15376293 | Msa0876860:CDS | 35.0% | |
| TCTGGAAAATCAACAACAAC+TGG | + | chr6_1:15376307-15376326 | Msa0876860:CDS | 35.0% | |
| ATGGGTTCTTGACAAACTTA+AGG | + | chr6_1:15376426-15376445 | Msa0876860:CDS | 35.0% | |
| !!! | TTTTGAAGCTGGTATCTCTA+AGG | + | chr6_1:15376621-15376640 | Msa0876860:CDS | 35.0% |
| GATGATCTGTTGTTGTAACA+AGG | + | chr6_1:15376696-15376715 | Msa0876860:CDS | 35.0% | |
| CTAGTTGTAGATTCTGACTT+TGG | + | chr6_1:15376941-15376960 | Msa0876860:intron | 35.0% | |
| AGTTTCATCCTACTTGAAGA+AGG | + | chr6_1:15377039-15377058 | Msa0876860:CDS | 35.0% | |
| CAAGATGTTTACAAGATTGG+TGG | + | chr6_1:15377235-15377254 | Msa0876860:CDS | 35.0% | |
| ! | GTTTACAAGATTGGTGGTAT+TGG | + | chr6_1:15377241-15377260 | Msa0876860:CDS | 35.0% |
| TGTTAAGAATGTTGCTGTGA+AGG | + | chr6_1:15377417-15377436 | Msa0876860:CDS | 35.0% | |
| !! | AACTTGTTACCAAGATTGAC+AGG | + | chr6_1:15377605-15377624 | Msa0876860:CDS | 35.0% |
| TCACCATTCTTCAAGAACTT+AGG | - | chr6_1:15377658-15377677 | None:intergenic | 35.0% | |
| TGATGCTGGTATCATTAAGA+TGG | + | chr6_1:15377675-15377694 | Msa0876860:CDS | 35.0% | |
| GTTGTGACATTACTTCTTCT+TGG | - | chr6_1:15377854-15377873 | None:intergenic | 35.0% | |
| GAAGAAGTAATGTCACAACA+TGG | + | chr6_1:15377855-15377874 | Msa0876860:exon | 35.0% | |
| AGAGAGAGACTGAGTGATAA+AGG | - | chr6_1:15374750-15374769 | None:intergenic | 40.0% | |
| ATGGAAGGTTGTTACTCGTT+CGG | - | chr6_1:15374785-15374804 | None:intergenic | 40.0% | |
| ATACCTCAGCTGAAACGAAA+TGG | - | chr6_1:15374804-15374823 | None:intergenic | 40.0% | |
| ! | TAGATTGGTTCATTGAGGGT+AGG | + | chr6_1:15375788-15375807 | Msa0876860:intron | 40.0% |
| ! | AGATTGGTTCATTGAGGGTA+GGG | + | chr6_1:15375789-15375808 | Msa0876860:intron | 40.0% |
| ! | CGTCTGAGCTTCATTTTGTT+AGG | + | chr6_1:15375897-15375916 | Msa0876860:intron | 40.0% |
| TTACCATCGATATTGCCTTG+TGG | + | chr6_1:15376467-15376486 | Msa0876860:CDS | 40.0% | |
| TTTCCACAAGGCAATATCGA+TGG | - | chr6_1:15376473-15376492 | None:intergenic | 40.0% | |
| AATGACTGTGCAGTAGTACT+TGG | - | chr6_1:15376506-15376525 | None:intergenic | 40.0% | |
| TTGATGAAATCACGATGTCC+AGG | - | chr6_1:15376535-15376554 | None:intergenic | 40.0% | |
| GCTCTTCTTGCATTTACTCT+TGG | + | chr6_1:15376664-15376683 | Msa0876860:CDS | 40.0% | |
| TCATCCTACTTGAAGAAGGT+TGG | + | chr6_1:15377043-15377062 | Msa0876860:CDS | 40.0% | |
| GTAACCAACCTTCTTCAAGT+AGG | - | chr6_1:15377050-15377069 | None:intergenic | 40.0% | |
| ! | GAACGAAGGGAATTTTGTCT+GGG | - | chr6_1:15377075-15377094 | None:intergenic | 40.0% |
| CATGTTGTCACCTTCAAATC+CGG | - | chr6_1:15377104-15377123 | None:intergenic | 40.0% | |
| AAGGTGACAACATGATTGAG+AGG | + | chr6_1:15377110-15377129 | Msa0876860:CDS | 40.0% | |
| TCCAAAAGTCACAACCATAC+CGG | - | chr6_1:15377308-15377327 | None:intergenic | 40.0% | |
| ACTTCAGTTGTCAATCCAGT+GGG | - | chr6_1:15377331-15377350 | None:intergenic | 40.0% | |
| AACTTCAGTTGTCAATCCAG+TGG | - | chr6_1:15377332-15377351 | None:intergenic | 40.0% | |
| ! | GTGGTTCATGATGATGACTT+GGG | - | chr6_1:15377512-15377531 | None:intergenic | 40.0% |
| AAACTTCACAGCAATGTGAG+AGG | - | chr6_1:15377581-15377600 | None:intergenic | 40.0% | |
| ATCTGGTAAGGAGATTGAGA+AGG | + | chr6_1:15377630-15377649 | Msa0876860:CDS | 40.0% | |
| GAGCCTAAGTTCTTGAAGAA+TGG | + | chr6_1:15377652-15377671 | Msa0876860:CDS | 40.0% | |
| ! | TTCTTGAAGAATGGTGATGC+TGG | + | chr6_1:15377661-15377680 | Msa0876860:CDS | 40.0% |
| TGCAGCTAAACTTACAGAAC+TGG | + | chr6_1:15377971-15377990 | Msa0876860:three_prime_UTR | 40.0% | |
| GCAGCTAAACTTACAGAACT+GGG | + | chr6_1:15377972-15377991 | Msa0876860:three_prime_UTR | 40.0% | |
| TACAGAACTGGGTTCTTGAT+CGG | + | chr6_1:15377983-15378002 | Msa0876860:three_prime_UTR | 40.0% | |
| ! | TAGCTTCATTTTGCTGCTGA+TGG | + | chr6_1:15378107-15378126 | Msa0876860:three_prime_UTR | 40.0% |
| TATCACTCAGTCTCTCTCTG+CGG | + | chr6_1:15374751-15374770 | Msa0876860:five_prime_UTR | 45.0% | |
| CTCAGCTGAAACGAAATGGA+AGG | - | chr6_1:15374800-15374819 | None:intergenic | 45.0% | |
| CTTCCATTTCGTTTCAGCTG+AGG | + | chr6_1:15374798-15374817 | Msa0876860:five_prime_UTR | 45.0% | |
| !!! | GAGGGTAGGGCTTTTTTAAC+TGG | + | chr6_1:15375802-15375821 | Msa0876860:intron | 45.0% |
| GGTCACTTGATCTACAAGCT+AGG | + | chr6_1:15376328-15376347 | Msa0876860:CDS | 45.0% | |
| CACTTGATCTACAAGCTAGG+AGG | + | chr6_1:15376331-15376350 | Msa0876860:CDS | 45.0% | |
| TGTGATCGAGAGATTCGAGA+AGG | + | chr6_1:15376366-15376385 | Msa0876860:CDS | 45.0% | |
| AGCGTTCATTCAAGTACGCA+TGG | + | chr6_1:15376407-15376426 | Msa0876860:CDS | 45.0% | |
| GCGTTCATTCAAGTACGCAT+GGG | + | chr6_1:15376408-15376427 | Msa0876860:CDS | 45.0% | |
| GGTGGTCTCAAATTTCCACA+AGG | - | chr6_1:15376485-15376504 | None:intergenic | 45.0% | |
| AAGAACAGCACAATCAGCCT+GGG | - | chr6_1:15376578-15376597 | None:intergenic | 45.0% | |
| TAAGAACAGCACAATCAGCC+TGG | - | chr6_1:15376579-15376598 | None:intergenic | 45.0% | |
| !! | CTTATCATTGACTCCACCAC+TGG | + | chr6_1:15376595-15376614 | Msa0876860:CDS | 45.0% |
| ! | GAAGCTGGTATCTCTAAGGA+TGG | + | chr6_1:15376625-15376644 | Msa0876860:CDS | 45.0% |
| CTTCACGATTTCATCGTACC+TGG | - | chr6_1:15377017-15377036 | None:intergenic | 45.0% | |
| CAGGTACGATGAAATCGTGA+AGG | + | chr6_1:15377015-15377034 | Msa0876860:CDS | 45.0% | |
| ! | GGAACGAAGGGAATTTTGTC+TGG | - | chr6_1:15377076-15377095 | None:intergenic | 45.0% |
| TCACCTTCAAATCCGGAGAT+GGG | - | chr6_1:15377097-15377116 | None:intergenic | 45.0% | |
| ACCAACCTTGACTGGTACAA+GGG | + | chr6_1:15377136-15377155 | Msa0876860:CDS | 45.0% | |
| TCAAGAGCCTCAAGAAGAGT+TGG | - | chr6_1:15377163-15377182 | None:intergenic | 45.0% | |
| ATCTTGCAATGGAAGCCTGA+GGG | - | chr6_1:15377221-15377240 | None:intergenic | 45.0% | |
| CCAAAAGTCACAACCATACC+GGG | - | chr6_1:15377307-15377326 | None:intergenic | 45.0% | |
| TTGAATCCGACATTGTCTCC+TGG | - | chr6_1:15377397-15377416 | None:intergenic | 45.0% | |
| TTTCGTAGCATCCAACTCCA+AGG | + | chr6_1:15377453-15377472 | Msa0876860:CDS | 45.0% | |
| ! | GATGACTTGGGAAGTGAAGT+TGG | - | chr6_1:15377500-15377519 | None:intergenic | 45.0% |
| ! | GGTGGTTCATGATGATGACT+TGG | - | chr6_1:15377513-15377532 | None:intergenic | 45.0% |
| AAGTGGAGGATATTCAGCGA+AGG | - | chr6_1:15377728-15377747 | None:intergenic | 45.0% | |
| TTCGCTGAATATCCTCCACT+TGG | + | chr6_1:15377727-15377746 | Msa0876860:CDS | 45.0% | |
| !! | ACTTGGACGTTTTGCTGTCA+GGG | + | chr6_1:15377744-15377763 | Msa0876860:CDS | 45.0% |
| ATGCGTCAAACTGTTGCTGT+TGG | + | chr6_1:15377769-15377788 | Msa0876860:CDS | 45.0% | |
| !! | TGTTGCTGTTGGTGTCATCA+AGG | + | chr6_1:15377780-15377799 | Msa0876860:CDS | 45.0% |
| !! | GTCATTGGACATGTCGACTC+TGG | + | chr6_1:15376289-15376308 | Msa0876860:CDS | 50.0% |
| CTTAAGGCTGAGCGTGAAAG+AGG | + | chr6_1:15376442-15376461 | Msa0876860:CDS | 50.0% | |
| GACTGTGCAGTAGTACTTGG+TGG | - | chr6_1:15376503-15376522 | None:intergenic | 50.0% | |
| TGCACAGTCATTGATGCACC+TGG | + | chr6_1:15376514-15376533 | Msa0876860:CDS | 50.0% | |
| !! | ATCATTGACTCCACCACTGG+TGG | + | chr6_1:15376598-15376617 | Msa0876860:CDS | 50.0% |
| AGCTTCAAAACCACCAGTGG+TGG | - | chr6_1:15376611-15376630 | None:intergenic | 50.0% | |
| !!! | ACCACTGGTGGTTTTGAAGC+TGG | + | chr6_1:15376610-15376629 | Msa0876860:CDS | 50.0% |
| ACCAGCTTCAAAACCACCAG+TGG | - | chr6_1:15376614-15376633 | None:intergenic | 50.0% | |
| ! | ATGCAAGAAGAGCGTGCTCA+CGG | - | chr6_1:15376657-15376676 | None:intergenic | 50.0% |
| TACCACCCCTAAGTACTCGA+AGG | + | chr6_1:15376991-15377010 | Msa0876860:CDS | 50.0% | |
| ! | ACCTGGCCTTCGAGTACTTA+GGG | - | chr6_1:15377000-15377019 | None:intergenic | 50.0% |
| ! | TACCTGGCCTTCGAGTACTT+AGG | - | chr6_1:15377001-15377020 | None:intergenic | 50.0% |
| ATTCCCTTCGTTCCCATCTC+CGG | + | chr6_1:15377082-15377101 | Msa0876860:CDS | 50.0% | |
| AATCCGGAGATGGGAACGAA+GGG | - | chr6_1:15377088-15377107 | None:intergenic | 50.0% | |
| AAATCCGGAGATGGGAACGA+AGG | - | chr6_1:15377089-15377108 | None:intergenic | 50.0% | |
| GTTCCCATCTCCGGATTTGA+AGG | + | chr6_1:15377091-15377110 | Msa0876860:CDS | 50.0% | |
| GTCACCTTCAAATCCGGAGA+TGG | - | chr6_1:15377098-15377117 | None:intergenic | 50.0% | |
| CTTGTACCAGTCAAGGTTGG+TGG | - | chr6_1:15377137-15377156 | None:intergenic | 50.0% | |
| CACCAACCTTGACTGGTACA+AGG | + | chr6_1:15377135-15377154 | Msa0876860:CDS | 50.0% | |
| TCCCTTGTACCAGTCAAGGT+TGG | - | chr6_1:15377140-15377159 | None:intergenic | 50.0% | |
| TTGGTCCCTTGTACCAGTCA+AGG | - | chr6_1:15377144-15377163 | None:intergenic | 50.0% | |
| CAAGGGACCAACTCTTCTTG+AGG | + | chr6_1:15377153-15377172 | Msa0876860:CDS | 50.0% | |
| ! | GTCTCTTTGGCTCGTTGATC+TGG | - | chr6_1:15377186-15377205 | None:intergenic | 50.0% |
| TCTTGCAATGGAAGCCTGAG+GGG | - | chr6_1:15377220-15377239 | None:intergenic | 50.0% | |
| CATCTTGCAATGGAAGCCTG+AGG | - | chr6_1:15377222-15377241 | None:intergenic | 50.0% | |
| ! | GGTATTGGAACTGTGCCAGT+TGG | + | chr6_1:15377256-15377275 | Msa0876860:CDS | 50.0% |
| CATACCGGGCTTCACAATAC+CGG | - | chr6_1:15377293-15377312 | None:intergenic | 50.0% | |
| ! | CCCGGTATGGTTGTGACTTT+TGG | + | chr6_1:15377304-15377323 | Msa0876860:CDS | 50.0% |
| ! | GTTGTGACTTTTGGACCCAC+TGG | + | chr6_1:15377313-15377332 | Msa0876860:CDS | 50.0% |
| GCTCTTCCAGGAGACAATGT+CGG | + | chr6_1:15377388-15377407 | Msa0876860:CDS | 50.0% | |
| AGTGAAGTTGGCAGCTTCCT+TGG | - | chr6_1:15377488-15377507 | None:intergenic | 50.0% | |
| GTCATCATCATGAACCACCC+TGG | + | chr6_1:15377514-15377533 | Msa0876860:CDS | 50.0% | |
| ATGAACCACCCTGGACAGAT+CGG | + | chr6_1:15377523-15377542 | Msa0876860:CDS | 50.0% | |
| ATCCGTTTCCGATCTGTCCA+GGG | - | chr6_1:15377534-15377553 | None:intergenic | 50.0% | |
| TATCCGTTTCCGATCTGTCC+AGG | - | chr6_1:15377535-15377554 | None:intergenic | 50.0% | |
| TCACAGCAATGTGAGAGGTG+TGG | - | chr6_1:15377576-15377595 | None:intergenic | 50.0% | |
| ACCAAGATTGACAGGCGATC+TGG | + | chr6_1:15377613-15377632 | Msa0876860:CDS | 50.0% | |
| ACCAGATCGCCTGTCAATCT+TGG | - | chr6_1:15377617-15377636 | None:intergenic | 50.0% | |
| GATTGACAGGCGATCTGGTA+AGG | + | chr6_1:15377618-15377637 | Msa0876860:CDS | 50.0% | |
| ACAGCAAAACGTCCAAGTGG+AGG | - | chr6_1:15377742-15377761 | None:intergenic | 50.0% | |
| CTGACAGCAAAACGTCCAAG+TGG | - | chr6_1:15377745-15377764 | None:intergenic | 50.0% | |
| !! | CACTTGGACGTTTTGCTGTC+AGG | + | chr6_1:15377743-15377762 | Msa0876860:CDS | 50.0% |
| !! | TGTTGGTGTCATCAAGGCTG+TGG | + | chr6_1:15377786-15377805 | Msa0876860:CDS | 50.0% |
| CATCAAGGCTGTGGAGAAGA+AGG | + | chr6_1:15377795-15377814 | Msa0876860:CDS | 50.0% | |
| GTGGAGAAGAAGGATCCTAC+TGG | + | chr6_1:15377805-15377824 | Msa0876860:CDS | 50.0% | |
| GAAGGATCCTACTGGAGCTA+AGG | + | chr6_1:15377813-15377832 | Msa0876860:CDS | 50.0% | |
| ! | TTGGTGACCTTAGCTCCAGT+AGG | - | chr6_1:15377823-15377842 | None:intergenic | 50.0% |
| TACTGGAGCTAAGGTCACCA+AGG | + | chr6_1:15377822-15377841 | Msa0876860:CDS | 50.0% | |
| CATGATTACCGGAACCTCCC+AGG | + | chr6_1:15376558-15376577 | Msa0876860:CDS | 55.0% | |
| ACAATCAGCCTGGGAGGTTC+CGG | - | chr6_1:15376569-15376588 | None:intergenic | 55.0% | |
| AACAGCACAATCAGCCTGGG+AGG | - | chr6_1:15376575-15376594 | None:intergenic | 55.0% | |
| ! | TGCAAGAAGAGCGTGCTCAC+GGG | - | chr6_1:15376656-15376675 | None:intergenic | 55.0% |
| ! | CCTGGCCTTCGAGTACTTAG+GGG | - | chr6_1:15376999-15377018 | None:intergenic | 55.0% |
| AGAGGTCCACCAACCTTGAC+TGG | + | chr6_1:15377128-15377147 | Msa0876860:CDS | 55.0% | |
| GGCTTGTCTGTGGGTCTCTT+TGG | - | chr6_1:15377199-15377218 | None:intergenic | 55.0% | |
| CCAGTTGGACGTGTTGAGAC+CGG | + | chr6_1:15377271-15377290 | Msa0876860:CDS | 55.0% | |
| GAGACCGGTATTGTGAAGCC+CGG | + | chr6_1:15377286-15377305 | Msa0876860:CDS | 55.0% | |
| CGGTATTGTGAAGCCCGGTA+TGG | + | chr6_1:15377291-15377310 | Msa0876860:CDS | 55.0% | |
| GTCTGTTGAGATGCACCACG+AGG | + | chr6_1:15377354-15377373 | Msa0876860:CDS | 55.0% | |
| GCTCTCACTGAAGCTCTTCC+AGG | + | chr6_1:15377376-15377395 | Msa0876860:CDS | 55.0% | |
| GCTGTGAAGGATCTCAAGCG+TGG | + | chr6_1:15377430-15377449 | Msa0876860:CDS | 55.0% | |
| TTCCTTGGCAGGGTCATCCT+TGG | - | chr6_1:15377473-15377492 | None:intergenic | 55.0% | |
| AGTTGGCAGCTTCCTTGGCA+GGG | - | chr6_1:15377483-15377502 | None:intergenic | 55.0% | |
| AAGTTGGCAGCTTCCTTGGC+AGG | - | chr6_1:15377484-15377503 | None:intergenic | 55.0% | |
| CACCCTGGACAGATCGGAAA+CGG | + | chr6_1:15377529-15377548 | Msa0876860:CDS | 55.0% | |
| GAGGTGTGGCAATCAAGCAC+TGG | - | chr6_1:15377562-15377581 | None:intergenic | 55.0% | |
| ! | TCAACCACCATGGGCTTGGT+GGG | - | chr6_1:15377703-15377722 | None:intergenic | 55.0% |
| GCGAAGGTCTCAACCACCAT+GGG | - | chr6_1:15377712-15377731 | None:intergenic | 55.0% | |
| AGCGAAGGTCTCAACCACCA+TGG | - | chr6_1:15377713-15377732 | None:intergenic | 55.0% | |
| CTTCTTCTTGGCAGCAGCCT+TGG | - | chr6_1:15377842-15377861 | None:intergenic | 55.0% | |
| ACTGGGTTCTTGATCGGCGA+TGG | + | chr6_1:15377989-15378008 | Msa0876860:three_prime_UTR | 55.0% | |
| TCAGTCTCTCTCTGCGGCTG+AGG | + | chr6_1:15374757-15374776 | Msa0876860:five_prime_UTR | 60.0% | |
| GGCCTTCGAGTACTTAGGGG+TGG | - | chr6_1:15376996-15377015 | None:intergenic | 60.0% | |
| CCCCTAAGTACTCGAAGGCC+AGG | + | chr6_1:15376996-15377015 | Msa0876860:CDS | 60.0% | |
| AGCCTGAGGGGCTTGTCTGT+GGG | - | chr6_1:15377208-15377227 | None:intergenic | 60.0% | |
| AAGCCTGAGGGGCTTGTCTG+TGG | - | chr6_1:15377209-15377228 | None:intergenic | 60.0% | |
| CCGGTCTCAACACGTCCAAC+TGG | - | chr6_1:15377274-15377293 | None:intergenic | 60.0% | |
| GAGCTTCAGTGAGAGCCTCG+TGG | - | chr6_1:15377372-15377391 | None:intergenic | 60.0% | |
| GGCAGGGTCATCCTTGGAGT+TGG | - | chr6_1:15377467-15377486 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCTGCCA+AGG | + | chr6_1:15377468-15377487 | Msa0876860:CDS | 60.0% | |
| CGTTTCCGATCTGTCCAGGG+TGG | - | chr6_1:15377531-15377550 | None:intergenic | 60.0% | |
| GATGGTTCCCACCAAGCCCA+TGG | + | chr6_1:15377693-15377712 | Msa0876860:CDS | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | - | chr6_1:15377704-15377723 | None:intergenic | 60.0% | |
| GGTCTCAACCACCATGGGCT+TGG | - | chr6_1:15377707-15377726 | None:intergenic | 60.0% | |
| GACCCACAGACAAGCCCCTC+AGG | + | chr6_1:15377203-15377222 | Msa0876860:CDS | 65.0% | |
| GGTTCCCACCAAGCCCATGG+TGG | + | chr6_1:15377696-15377715 | Msa0876860:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 15374728 | 15378221 | 15374728 | ID=Msa0876860;Name=Msa0876860 |
| chr6_1 | mRNA | 15374728 | 15378221 | 15374728 | ID=Msa0876860-mRNA-1;Parent=Msa0876860;Name=Msa0876860-mRNA-1;_AED=0.15;_eAED=0.15;_QI=103|1|1|1|0.33|0|4|315|447 |
| chr6_1 | exon | 15374728 | 15374819 | 15374728 | ID=Msa0876860-mRNA-1:exon:4439;Parent=Msa0876860-mRNA-1 |
| chr6_1 | exon | 15376245 | 15376717 | 15376245 | ID=Msa0876860-mRNA-1:exon:4440;Parent=Msa0876860-mRNA-1 |
| chr6_1 | exon | 15376983 | 15377876 | 15376983 | ID=Msa0876860-mRNA-1:exon:4441;Parent=Msa0876860-mRNA-1 |
| chr6_1 | exon | 15377919 | 15378221 | 15377919 | ID=Msa0876860-mRNA-1:exon:4442;Parent=Msa0876860-mRNA-1 |
| chr6_1 | five_prime_UTR | 15374728 | 15374819 | 15374728 | ID=Msa0876860-mRNA-1:five_prime_utr;Parent=Msa0876860-mRNA-1 |
| chr6_1 | five_prime_UTR | 15376245 | 15376255 | 15376245 | ID=Msa0876860-mRNA-1:five_prime_utr;Parent=Msa0876860-mRNA-1 |
| chr6_1 | CDS | 15376256 | 15376717 | 15376256 | ID=Msa0876860-mRNA-1:cds;Parent=Msa0876860-mRNA-1 |
| chr6_1 | CDS | 15376983 | 15377864 | 15376983 | ID=Msa0876860-mRNA-1:cds;Parent=Msa0876860-mRNA-1 |
| chr6_1 | three_prime_UTR | 15377865 | 15377876 | 15377865 | ID=Msa0876860-mRNA-1:three_prime_utr;Parent=Msa0876860-mRNA-1 |
| chr6_1 | three_prime_UTR | 15377919 | 15378221 | 15377919 | ID=Msa0876860-mRNA-1:three_prime_utr;Parent=Msa0876860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
