Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170790 | XP_004495443.1 | 74.610 | 898 | 161 | 10 | 1 | 890 | 1 | 839 | 0.0 | 1311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170790 | A0A1S2XW70 | 74.610 | 898 | 161 | 10 | 1 | 890 | 1 | 839 | 0.0 | 1311 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0170790 | Msa0317730 | 0.802860 | 4.591639e-49 | -8.615850e-47 |
| Msa0170790 | Msa0411190 | 0.802370 | 5.794568e-49 | -8.615850e-47 |
| Msa0170790 | Msa1167220 | 0.802603 | 5.187973e-49 | -8.615850e-47 |
| Msa0170790 | Msa1186060 | 0.816879 | 4.404307e-52 | -8.615850e-47 |
| Msa0170790 | Msa1411020 | 0.812848 | 3.447624e-51 | -8.615850e-47 |
| Msa0170790 | Msa1423390 | 0.802857 | 4.597143e-49 | -8.615850e-47 |
| Msa0170790 | Msa1424290 | 0.804544 | 2.053359e-49 | -8.615850e-47 |
| Msa0170790 | Msa1434350 | 0.809254 | 2.072200e-50 | -8.615850e-47 |
| Msa0170790 | Msa1439320 | 0.805520 | 1.283247e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170790 | MtrunA17_Chr1g0188471 | 97.408 | 463 | 11 | 1 | 1 | 463 | 1 | 462 | 0.0 | 901 |
| Msa0170790 | MtrunA17_Chr1g0188471 | 98.889 | 360 | 4 | 0 | 531 | 890 | 462 | 821 | 0.0 | 759 |
| Msa0170790 | MtrunA17_Chr6g0477131 | 79.167 | 360 | 75 | 0 | 531 | 890 | 380 | 739 | 0.0 | 620 |
| Msa0170790 | MtrunA17_Chr6g0477131 | 50.801 | 437 | 146 | 13 | 38 | 463 | 2 | 380 | 1.35e-101 | 332 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170790 | AT5G08450.3 | 76.712 | 365 | 78 | 3 | 531 | 890 | 556 | 918 | 0.0 | 597 |
| Msa0170790 | AT5G08450.3 | 43.008 | 472 | 179 | 13 | 55 | 463 | 112 | 556 | 7.19e-82 | 283 |
| Msa0170790 | AT5G08450.1 | 76.712 | 365 | 78 | 3 | 531 | 890 | 556 | 918 | 0.0 | 597 |
| Msa0170790 | AT5G08450.1 | 43.008 | 472 | 179 | 13 | 55 | 463 | 112 | 556 | 7.19e-82 | 283 |
| Msa0170790 | AT5G08450.2 | 76.712 | 365 | 78 | 3 | 531 | 890 | 556 | 918 | 0.0 | 597 |
| Msa0170790 | AT5G08450.2 | 43.008 | 472 | 179 | 13 | 55 | 463 | 112 | 556 | 7.19e-82 | 283 |
Find 237 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTAATTAATGTACTTATT+TGG | 0.116289 | 1_4:+55166271 | Msa0170790:three_prime_UTR |
| ACTGACGACGGCGCTAATTT+TGG | 0.140671 | 1_4:-55160017 | None:intergenic |
| GGTCAGAGGTGGCCAGCTTT+GGG | 0.198491 | 1_4:+55163777 | Msa0170790:intron |
| CACATCTGCTCGATTGAAAA+AGG | 0.213489 | 1_4:+55165353 | Msa0170790:CDS |
| TATTTGTCTTTCACTTCTAT+TGG | 0.234463 | 1_4:+55166214 | Msa0170790:three_prime_UTR |
| TATATAAGTTCTGGTATTTC+AGG | 0.243212 | 1_4:+55161740 | Msa0170790:CDS |
| CGTGCTTGGGGTGCTAAAAT+TGG | 0.248389 | 1_4:+55164236 | Msa0170790:CDS |
| ATTTGTCTTTCACTTCTATT+GGG | 0.254742 | 1_4:+55166215 | Msa0170790:three_prime_UTR |
| AGGTCAGAGGTGGCCAGCTT+TGG | 0.257111 | 1_4:+55163776 | Msa0170790:intron |
| GTGCCGGCAGAAATTGTTAT+TGG | 0.264321 | 1_4:+55161623 | Msa0170790:CDS |
| CAAACTGGTGTTTGGATTGC+AGG | 0.277043 | 1_4:+55166105 | Msa0170790:CDS |
| TTTAGATCTATCGTCACTTT+TGG | 0.280935 | 1_4:-55160648 | None:intergenic |
| GATTCATTCGCCTGAGTTGC+TGG | 0.305306 | 1_4:-55165779 | None:intergenic |
| GGGAAGCTCGTGAAGCTGTT+GGG | 0.312197 | 1_4:+55160609 | Msa0170790:CDS |
| TGATCCTCCTGGCGCGAGTT+TGG | 0.318436 | 1_4:+55160499 | Msa0170790:CDS |
| GGAGCCCTCAGGTGCCTAAT+CGG | 0.318721 | 1_4:+55161263 | Msa0170790:CDS |
| CTAATCGGGAGCCTCGTTTC+AGG | 0.319281 | 1_4:+55161278 | Msa0170790:CDS |
| GACTCTTCATGAGATTTCTT+AGG | 0.324563 | 1_4:-55159948 | None:intergenic |
| AAATACCAGAACTTATATAT+TGG | 0.329432 | 1_4:-55161736 | None:intergenic |
| AAGAATTACGCGCAACCATT+CGG | 0.339382 | 1_4:+55163977 | Msa0170790:CDS |
| GTTATTTGAAACATCTTTCT+CGG | 0.345745 | 1_4:-55160969 | None:intergenic |
| GGAAGTGAAGCACCGGGACT+GGG | 0.346673 | 1_4:+55160691 | Msa0170790:CDS |
| AGGAAGTGAAGCACCGGGAC+TGG | 0.347111 | 1_4:+55160690 | Msa0170790:CDS |
| GGTAAGACAGTTTCTTGTTC+AGG | 0.349229 | 1_4:-55161025 | None:intergenic |
| TCTTATGTTGTTTATAAAGT+TGG | 0.350015 | 1_4:+55161776 | Msa0170790:CDS |
| CGATGGATGTGCTGATGGGC+AGG | 0.353882 | 1_4:+55161168 | Msa0170790:CDS |
| TGTATGGACATACAATCTTT+TGG | 0.367782 | 1_4:-55164009 | None:intergenic |
| ACTGAGAAGAAGGAGATGTT+TGG | 0.371321 | 1_4:+55160260 | Msa0170790:CDS |
| TATCATATGTCTTATGATAT+AGG | 0.371947 | 1_4:+55160050 | Msa0170790:CDS |
| AATGGTCTCAAACTGGTGTT+TGG | 0.374846 | 1_4:+55166097 | Msa0170790:CDS |
| AGAATTACGCGCAACCATTC+GGG | 0.375276 | 1_4:+55163978 | Msa0170790:CDS |
| CAATGTACGTTCCCGTGCTT+GGG | 0.376198 | 1_4:+55164223 | Msa0170790:CDS |
| GAAAGGGAAGCTGATTTAGT+AGG | 0.382092 | 1_4:+55161100 | Msa0170790:CDS |
| TCAGCAGAACCTAGGGAGTA+TGG | 0.384071 | 1_4:+55160584 | Msa0170790:CDS |
| ACAGGTCTGATAAGCGTAGT+AGG | 0.390926 | 1_4:+55161125 | Msa0170790:CDS |
| GCAACTCAGGCGAATGAATC+AGG | 0.392221 | 1_4:+55165782 | Msa0170790:CDS |
| GCCCATTGATAATCAATTGC+TGG | 0.392653 | 1_4:+55161645 | Msa0170790:CDS |
| CCCTTCGTTGTCTTGGGTGC+GGG | 0.393639 | 1_4:-55161302 | None:intergenic |
| GAAAGTACCCTTCGTTGTCT+TGG | 0.394292 | 1_4:-55161309 | None:intergenic |
| TAACCGTTCTACATAAACTA+TGG | 0.400257 | 1_4:-55166323 | None:intergenic |
| GACTCTTGCTCCCGTGGCTG+TGG | 0.403687 | 1_4:+55164434 | Msa0170790:CDS |
| GAGCCCTCAGGTGCCTAATC+GGG | 0.404322 | 1_4:+55161264 | Msa0170790:CDS |
| ATGATATAGGTCAGGATTCT+CGG | 0.404344 | 1_4:+55160063 | Msa0170790:CDS |
| ACAATGTACGTTCCCGTGCT+TGG | 0.404868 | 1_4:+55164222 | Msa0170790:CDS |
| TGAACAAGAAACTGTCTTAC+CGG | 0.408860 | 1_4:+55161027 | Msa0170790:CDS |
| CTTGATTCTAACCTCTTCTC+AGG | 0.412606 | 1_4:-55160188 | None:intergenic |
| TATGACTCCGATCTTGTTGC+TGG | 0.415495 | 1_4:+55163817 | Msa0170790:CDS |
| CAGAAATTGATGCGCACGAT+TGG | 0.415912 | 1_4:+55165917 | Msa0170790:CDS |
| CTAGCGGCCTTCACTTGGAT+TGG | 0.416607 | 1_4:+55160438 | Msa0170790:CDS |
| CTGAAACGAGGCTCCCGATT+AGG | 0.420816 | 1_4:-55161277 | None:intergenic |
| AACCTCTTCTCAGGACCAAC+AGG | 0.425551 | 1_4:-55160179 | None:intergenic |
| ACAAACCGAGGCTGCGGCCC+TGG | 0.427516 | 1_4:-55164472 | None:intergenic |
| AAAGTACCCTTCGTTGTCTT+GGG | 0.428159 | 1_4:-55161308 | None:intergenic |
| ATGGCCCTACTCTGGAAATT+CGG | 0.430745 | 1_4:+55161885 | Msa0170790:CDS |
| GTGATCTTTGTATCCTCTTA+CGG | 0.431829 | 1_4:-55161237 | None:intergenic |
| GATGTTTGGAGAAGTAAGAA+AGG | 0.434703 | 1_4:+55160274 | Msa0170790:CDS |
| TGCCAGCAATTGATTATCAA+TGG | 0.435849 | 1_4:-55161647 | None:intergenic |
| CCGGATATCTCTACTATCCT+TGG | 0.436996 | 1_4:-55160216 | None:intergenic |
| AACGAGAAGGAACCTGTTGA+TGG | 0.437471 | 1_4:+55160989 | Msa0170790:CDS |
| AAGTACATTAATTAATATGT+TGG | 0.438464 | 1_4:-55166265 | None:intergenic |
| GTCAGAGGTGGCCAGCTTTG+GGG | 0.439119 | 1_4:+55163778 | Msa0170790:CDS |
| AGGAAAAGGATCAGATGAAG+AGG | 0.440033 | 1_4:+55160930 | Msa0170790:CDS |
| TGCAGCTAGCGGCCTTCACT+TGG | 0.441594 | 1_4:+55160433 | Msa0170790:CDS |
| TTAGGTGTTGGAGGAGAACT+TGG | 0.446465 | 1_4:+55166059 | Msa0170790:intron |
| TCAGAGGTGGCCAGCTTTGG+GGG | 0.447982 | 1_4:+55163779 | Msa0170790:CDS |
| GATATACAATGGTCTCAAAC+TGG | 0.449001 | 1_4:+55166090 | Msa0170790:CDS |
| CTCTAACAATGGCCCTACTC+TGG | 0.456696 | 1_4:+55161877 | Msa0170790:CDS |
| ACCTTAGCTGATCCATCAAC+AGG | 0.456700 | 1_4:-55161001 | None:intergenic |
| CGCATCAATTTCTGTGGCAG+AGG | 0.457575 | 1_4:-55165908 | None:intergenic |
| GCATCAATCATAACATGATC+AGG | 0.460916 | 1_4:-55165860 | None:intergenic |
| GACTACCAGGGCCGCAGCCT+CGG | 0.462584 | 1_4:+55164467 | Msa0170790:CDS |
| ACCCTTCGTTGTCTTGGGTG+CGG | 0.464608 | 1_4:-55161303 | None:intergenic |
| CACCATCCACATTCTGCAAA+TGG | 0.465832 | 1_4:+55165824 | Msa0170790:CDS |
| GCAGGAGGTGGAGATGCTGT+TGG | 0.466066 | 1_4:-55163946 | None:intergenic |
| TGGTGTTTGGATTGCAGGAA+AGG | 0.471986 | 1_4:+55166110 | Msa0170790:CDS |
| TCTTGTATGGCTGCAGGAGG+TGG | 0.472238 | 1_4:-55163958 | None:intergenic |
| AGATAGAGATGTTGAAAGGT+GGG | 0.473992 | 1_4:+55160859 | Msa0170790:CDS |
| GGGGAAGCTCGTGAAGCTGT+TGG | 0.476726 | 1_4:+55160608 | Msa0170790:CDS |
| TCATGAAGGAACACTGGTGC+CGG | 0.477502 | 1_4:+55161607 | Msa0170790:CDS |
| ATGGATGTGCTGATGGGCAG+GGG | 0.480832 | 1_4:+55161170 | Msa0170790:CDS |
| TCGTATCACGATTCTCAAAC+CGG | 0.482743 | 1_4:-55160235 | None:intergenic |
| TAAAGACAAGAGAAAAGAAA+GGG | 0.483019 | 1_4:+55161084 | Msa0170790:CDS |
| CTAAAGACAAGAGAAAAGAA+AGG | 0.484997 | 1_4:+55161083 | Msa0170790:CDS |
| GCACTATGATTAGGTGTTGG+AGG | 0.485559 | 1_4:+55166050 | Msa0170790:intron |
| GAAAAGGATGCACATGTTGA+AGG | 0.486225 | 1_4:+55160317 | Msa0170790:CDS |
| GAGATGTTGAAAGGTGGGAG+AGG | 0.486297 | 1_4:+55160864 | Msa0170790:CDS |
| AGATGTTGAAAGGTGGGAGA+GGG | 0.486731 | 1_4:+55160865 | Msa0170790:CDS |
| GAAGTGAAGCACCGGGACTG+GGG | 0.487618 | 1_4:+55160692 | Msa0170790:CDS |
| ACATCTCTATCTTGTTTCTG+AGG | 0.488640 | 1_4:-55160848 | None:intergenic |
| CAGAACCTAGGGAGTATGGC+GGG | 0.488731 | 1_4:+55160588 | Msa0170790:CDS |
| AAAAGAAAATTTAAAAGAGA+AGG | 0.489507 | 1_4:+55160910 | Msa0170790:CDS |
| CTGAGAAGAGGTTAGAATCA+AGG | 0.489609 | 1_4:+55160189 | Msa0170790:CDS |
| AAAGAAAGGAAGTGAAGCAC+CGG | 0.490686 | 1_4:+55160684 | Msa0170790:CDS |
| AGTGAAGTCTATAACTATAG+TGG | 0.492425 | 1_4:+55161208 | Msa0170790:CDS |
| CGTAATTCTTGTATGGCTGC+AGG | 0.493153 | 1_4:-55163964 | None:intergenic |
| CAGGAGGTGGAGATGCTGTT+GGG | 0.493377 | 1_4:-55163945 | None:intergenic |
| AGTCATAATAATGATTCAAA+AGG | 0.494074 | 1_4:+55160380 | Msa0170790:CDS |
| GATGGATGTGCTGATGGGCA+GGG | 0.497012 | 1_4:+55161169 | Msa0170790:CDS |
| TCAGAGTGCTAAAAGTGAAA+AGG | 0.503292 | 1_4:+55160301 | Msa0170790:CDS |
| CAGGGTTCCAAACTCGCGCC+AGG | 0.504011 | 1_4:-55160506 | None:intergenic |
| CTCCTCTTCATTCAGTGTAT+CGG | 0.505553 | 1_4:+55160120 | Msa0170790:CDS |
| ACAATCTTTGCAATGAGCCT+TGG | 0.506694 | 1_4:+55165020 | Msa0170790:CDS |
| TGCACAGTTCTCATGCATAC+AGG | 0.508695 | 1_4:+55163913 | Msa0170790:intron |
| CTGGCGCGAGTTTGGAACCC+TGG | 0.512356 | 1_4:+55160507 | Msa0170790:CDS |
| GGTTGCGCGTAATTCTTGTA+TGG | 0.512360 | 1_4:-55163971 | None:intergenic |
| GCTGAAACAAACCGAGGCTG+CGG | 0.512908 | 1_4:-55164478 | None:intergenic |
| ATGTTATGATTGATGCGTTC+CGG | 0.513877 | 1_4:+55165867 | Msa0170790:CDS |
| GCCAGCAATTGATTATCAAT+GGG | 0.515076 | 1_4:-55161646 | None:intergenic |
| GAGTTCATCAGCAGAACCTA+GGG | 0.518197 | 1_4:+55160577 | Msa0170790:CDS |
| AGAGTTCATCAGCAGAACCT+AGG | 0.520131 | 1_4:+55160576 | Msa0170790:CDS |
| ATTGTCCGCTCCACAGCCAC+GGG | 0.521413 | 1_4:-55164444 | None:intergenic |
| TGATATAGGTCAGGATTCTC+GGG | 0.522666 | 1_4:+55160064 | Msa0170790:CDS |
| ACACAAGGTTCACTTGAGGT+TGG | 0.522806 | 1_4:+55160548 | Msa0170790:CDS |
| ATAGTGGTCAGCACCGTAAG+AGG | 0.524152 | 1_4:+55161224 | Msa0170790:CDS |
| TCAGACGATGGATGTGCTGA+TGG | 0.524170 | 1_4:+55161163 | Msa0170790:CDS |
| AAATTTAAAAGAGAAGGAAA+AGG | 0.524644 | 1_4:+55160916 | Msa0170790:CDS |
| AAGCTGATTTAGTAGGAGAC+AGG | 0.524761 | 1_4:+55161107 | Msa0170790:CDS |
| ACAAGAAATGCACCCTTGCA+AGG | 0.525240 | 1_4:-55166140 | None:intergenic |
| GGCTCCCGATTAGGCACCTG+AGG | 0.529407 | 1_4:-55161268 | None:intergenic |
| CCAAGGATAGTAGAGATATC+CGG | 0.529723 | 1_4:+55160216 | Msa0170790:CDS |
| AGGTGATACTAAGACAGAAA+AGG | 0.531406 | 1_4:+55160400 | Msa0170790:CDS |
| CAGGTCTGATAAGCGTAGTA+GGG | 0.533020 | 1_4:+55161126 | Msa0170790:CDS |
| AAGTGAAGCACCGGGACTGG+GGG | 0.535096 | 1_4:+55160693 | Msa0170790:CDS |
| TTTGTTTCAGTGGCTCATGA+AGG | 0.536552 | 1_4:+55161593 | Msa0170790:CDS |
| TATGTCTTATGATATAGGTC+AGG | 0.537828 | 1_4:+55160055 | Msa0170790:CDS |
| AAGATAGAGATGTTGAAAGG+TGG | 0.538683 | 1_4:+55160858 | Msa0170790:CDS |
| TATGCACCCGCGTCTTCATG+CGG | 0.540328 | 1_4:-55159993 | None:intergenic |
| TGGAGCGGACAATGACTACC+AGG | 0.540569 | 1_4:+55164454 | Msa0170790:CDS |
| AAAATATATTCTGATCCTCC+TGG | 0.540746 | 1_4:+55160488 | Msa0170790:CDS |
| GGCACTGTTTAGCGGTGGAA+TGG | 0.541199 | 1_4:+55161666 | Msa0170790:CDS |
| CACCATTTGCAGAATGTGGA+TGG | 0.541504 | 1_4:-55165826 | None:intergenic |
| TTTGTCTTTCACTTCTATTG+GGG | 0.541784 | 1_4:+55166216 | Msa0170790:three_prime_UTR |
| CTCAGGACCAACAGGATGCT+CGG | 0.542188 | 1_4:-55160171 | None:intergenic |
| CATATATGTTGCAGGTCTCA+AGG | 0.542324 | 1_4:+55161559 | Msa0170790:intron |
| CAATTGCTGGCACTGTTTAG+CGG | 0.545739 | 1_4:+55161658 | Msa0170790:CDS |
| ATTCCCACGTAACATAGGCC+AGG | 0.545836 | 1_4:-55160525 | None:intergenic |
| TGAGAAGAGGTTAGAATCAA+GGG | 0.546444 | 1_4:+55160190 | Msa0170790:CDS |
| GGAAAAGGATCAGATGAAGA+GGG | 0.549365 | 1_4:+55160931 | Msa0170790:CDS |
| ATTTGGAGACGCACACGACC+AGG | 0.549950 | 1_4:+55165388 | Msa0170790:CDS |
| TTGTCTTTCACTTCTATTGG+GGG | 0.550330 | 1_4:+55166217 | Msa0170790:three_prime_UTR |
| ATGAAGAGGGAGTCGTGGAA+TGG | 0.551838 | 1_4:+55160944 | Msa0170790:CDS |
| GGAAGCTCGTGAAGCTGTTG+GGG | 0.552492 | 1_4:+55160610 | Msa0170790:CDS |
| TGCTGGAGAGAAATTGGTCA+AGG | 0.552942 | 1_4:+55165751 | Msa0170790:CDS |
| ACCTGTTGATGGATCAGCTA+AGG | 0.553093 | 1_4:+55161000 | Msa0170790:CDS |
| CAAGGCTACACCAGCAACTC+AGG | 0.553901 | 1_4:+55165769 | Msa0170790:CDS |
| AATGGTGAAAGCTCTAACAA+TGG | 0.554756 | 1_4:+55161866 | Msa0170790:CDS |
| CAGCCATAGTTTATGTAGAA+CGG | 0.555704 | 1_4:+55166320 | Msa0170790:three_prime_UTR |
| GTTAGAATCAAGGGAATCCA+AGG | 0.556992 | 1_4:+55160199 | Msa0170790:CDS |
| TGGATGTGCTGATGGGCAGG+GGG | 0.557536 | 1_4:+55161171 | Msa0170790:CDS |
| TAAGAGGATACAAAGATCAC+GGG | 0.558324 | 1_4:+55161240 | Msa0170790:CDS |
| TGTGTATTCCCACGTAACAT+AGG | 0.560970 | 1_4:-55160530 | None:intergenic |
| TTGCTCCCGTGGCTGTGGAG+CGG | 0.565542 | 1_4:+55164439 | Msa0170790:CDS |
| AATCGAGCAGATGTGTATTG+TGG | 0.566279 | 1_4:-55165345 | None:intergenic |
| TGATACGAAGACTGAGAAGA+AGG | 0.566732 | 1_4:+55160250 | Msa0170790:CDS |
| TGTTGGAGGAGAACTTGGAC+TGG | 0.568034 | 1_4:+55166064 | Msa0170790:CDS |
| ATGCACCCGCGTCTTCATGC+GGG | 0.569299 | 1_4:-55159992 | None:intergenic |
| CATTGTCCGCTCCACAGCCA+CGG | 0.570099 | 1_4:-55164445 | None:intergenic |
| GCTTCCCCGCCATACTCCCT+AGG | 0.571076 | 1_4:-55160593 | None:intergenic |
| AGGTTCACTTGAGGTTGGAA+AGG | 0.576742 | 1_4:+55160553 | Msa0170790:CDS |
| TATAAGCATTGTAGCAGACA+AGG | 0.576918 | 1_4:+55165311 | Msa0170790:CDS |
| TTAGCAACACAGGTAGTGAC+TGG | 0.577390 | 1_4:+55160759 | Msa0170790:CDS |
| GATGCACATGTTGAAGGTAG+AGG | 0.578160 | 1_4:+55160323 | Msa0170790:CDS |
| TGAGCCGACTCTTGCTCCCG+TGG | 0.579023 | 1_4:+55164428 | Msa0170790:CDS |
| CATTATTGTATTCAGGTCAG+AGG | 0.579579 | 1_4:+55163763 | Msa0170790:intron |
| ATCAGATGAAGAGGGAGTCG+TGG | 0.581068 | 1_4:+55160939 | Msa0170790:CDS |
| GAACCCTGGCCTATGTTACG+TGG | 0.582096 | 1_4:+55160521 | Msa0170790:CDS |
| AACAAGATAGAGATGTTGAA+AGG | 0.584267 | 1_4:+55160855 | Msa0170790:CDS |
| GAAAGGAATATACCCTTGCA+AGG | 0.585289 | 1_4:+55166127 | Msa0170790:CDS |
| ATTCTTTCCAATCCAAGTGA+AGG | 0.587175 | 1_4:-55160445 | None:intergenic |
| TCGACATGTTCAAGAGGCAG+AGG | 0.587259 | 1_4:-55165944 | None:intergenic |
| GATATCCGAATTTCCAGAGT+AGG | 0.587951 | 1_4:-55161890 | None:intergenic |
| GAATGAATCAGGCGTAGAGA+AGG | 0.589941 | 1_4:+55165793 | Msa0170790:CDS |
| ATCCTGTTGGTCCTGAGAAG+AGG | 0.593231 | 1_4:+55160177 | Msa0170790:CDS |
| AATATACAAGTTAGCAACAC+AGG | 0.595142 | 1_4:+55160749 | Msa0170790:CDS |
| CCTCATGCCGAGCATCCTGT+TGG | 0.598265 | 1_4:+55160164 | Msa0170790:CDS |
| AGACATACCAGCAACAAGAT+CGG | 0.598403 | 1_4:-55163824 | None:intergenic |
| TGCAAGAGCTGATAAAGTTG+TGG | 0.600141 | 1_4:+55161807 | Msa0170790:CDS |
| TGGTATTTCAGGTAAAGTAG+AGG | 0.601143 | 1_4:+55161751 | Msa0170790:CDS |
| GCTTCTTGCAACGAGACCAC+CGG | 0.601765 | 1_4:-55165886 | None:intergenic |
| ATATCCGAATTTCCAGAGTA+GGG | 0.603553 | 1_4:-55161889 | None:intergenic |
| TATTGTATTCAGGTCAGAGG+TGG | 0.606120 | 1_4:+55163766 | Msa0170790:intron |
| TTCCCACGTAACATAGGCCA+GGG | 0.607709 | 1_4:-55160524 | None:intergenic |
| CCCGCACCCAAGACAACGAA+GGG | 0.610400 | 1_4:+55161302 | Msa0170790:CDS |
| ACAATGAAACATGAAGGAAG+AGG | 0.610455 | 1_4:-55161334 | None:intergenic |
| CCAACAGGATGCTCGGCATG+AGG | 0.610635 | 1_4:-55160164 | None:intergenic |
| GGGCCAATAACAATTTCTGC+CGG | 0.610715 | 1_4:-55161626 | None:intergenic |
| GATAAAAGCGCCTCGTGATG+CGG | 0.611113 | 1_4:+55160088 | Msa0170790:CDS |
| GTACAAGTAAGCAATACGAT+TGG | 0.611525 | 1_4:+55160812 | Msa0170790:CDS |
| CAAGAAATGCACCCTTGCAA+GGG | 0.613007 | 1_4:-55166139 | None:intergenic |
| GCGTAGTAGGGGCTTTGACA+AGG | 0.613937 | 1_4:+55161138 | Msa0170790:CDS |
| GCTCCCGATTAGGCACCTGA+GGG | 0.614570 | 1_4:-55161267 | None:intergenic |
| GTTGGAGGAGAACTTGGACT+GGG | 0.614908 | 1_4:+55166065 | Msa0170790:CDS |
| TTGCTGGCACTGTTTAGCGG+TGG | 0.615404 | 1_4:+55161661 | Msa0170790:CDS |
| ACAGCCACGGGAGCAAGAGT+CGG | 0.619177 | 1_4:-55164432 | None:intergenic |
| GTAAGAGGATACAAAGATCA+CGG | 0.619894 | 1_4:+55161239 | Msa0170790:CDS |
| ATCCGATACACTGAATGAAG+AGG | 0.624856 | 1_4:-55160122 | None:intergenic |
| AGTGAAGCACCGGGACTGGG+GGG | 0.625939 | 1_4:+55160694 | Msa0170790:CDS |
| AGTGGCTCATGAAGGAACAC+TGG | 0.626274 | 1_4:+55161601 | Msa0170790:CDS |
| GCTGCAGTTATCGAATTGAA+CGG | 0.629213 | 1_4:+55164258 | Msa0170790:CDS |
| AGATGTTTCAAATAACGAGA+AGG | 0.629885 | 1_4:+55160976 | Msa0170790:CDS |
| AAAACACCCGCATGAAGACG+CGG | 0.631459 | 1_4:+55159986 | Msa0170790:CDS |
| TGGGTGCGGGACCTGAAACG+AGG | 0.631463 | 1_4:-55161289 | None:intergenic |
| TGAACGGTGTTGCATTGTGA+AGG | 0.636161 | 1_4:+55164274 | Msa0170790:CDS |
| TCTGCCTCTTGAACATGTCG+AGG | 0.636664 | 1_4:+55165946 | Msa0170790:CDS |
| AATGTACGTTCCCGTGCTTG+GGG | 0.639375 | 1_4:+55164224 | Msa0170790:CDS |
| GATCTTCTCTCCGCATCACG+AGG | 0.640102 | 1_4:-55160098 | None:intergenic |
| ATAAGCATTGTAGCAGACAA+GGG | 0.640627 | 1_4:+55165312 | Msa0170790:CDS |
| AATACCTCGACATGTTCAAG+AGG | 0.641245 | 1_4:-55165950 | None:intergenic |
| CGACATGTTCAAGAGGCAGA+GGG | 0.643401 | 1_4:-55165943 | None:intergenic |
| AGAACCTAGGGAGTATGGCG+GGG | 0.645192 | 1_4:+55160589 | Msa0170790:CDS |
| AGAGCTGATAAAGTTGTGGA+CGG | 0.646325 | 1_4:+55161811 | Msa0170790:CDS |
| ATCGTGCGCATCAATTTCTG+TGG | 0.646758 | 1_4:-55165914 | None:intergenic |
| AGGTCTGATAAGCGTAGTAG+GGG | 0.648633 | 1_4:+55161127 | Msa0170790:CDS |
| GTAAGCAATACGATTGGTGA+CGG | 0.650602 | 1_4:+55160818 | Msa0170790:CDS |
| CAGACGATGGATGTGCTGAT+GGG | 0.653210 | 1_4:+55161164 | Msa0170790:CDS |
| AATTCTTGTATGGCTGCAGG+AGG | 0.654697 | 1_4:-55163961 | None:intergenic |
| GGTTCCAAACTCGCGCCAGG+AGG | 0.657439 | 1_4:-55160503 | None:intergenic |
| AAACACCCGCATGAAGACGC+GGG | 0.657870 | 1_4:+55159987 | Msa0170790:CDS |
| AAGAAAGGAAGTGAAGCACC+GGG | 0.659425 | 1_4:+55160685 | Msa0170790:CDS |
| AACCCTGGCCTATGTTACGT+GGG | 0.660129 | 1_4:+55160522 | Msa0170790:CDS |
| TCCCGCACCCAAGACAACGA+AGG | 0.660777 | 1_4:+55161301 | Msa0170790:CDS |
| AAAGGAATATACCCTTGCAA+GGG | 0.667302 | 1_4:+55166128 | Msa0170790:CDS |
| TTATGATTGATGCGTTCCGG+TGG | 0.672968 | 1_4:+55165870 | Msa0170790:CDS |
| ATTTGTAGCAGTAACATACT+CGG | 0.674038 | 1_4:-55161915 | None:intergenic |
| AGGTAGAGGAGATGACAACA+AGG | 0.676602 | 1_4:+55160337 | Msa0170790:CDS |
| ATGTTACGTGGGAATACACA+AGG | 0.680426 | 1_4:+55160533 | Msa0170790:CDS |
| GCAGAACCTAGGGAGTATGG+CGG | 0.681633 | 1_4:+55160587 | Msa0170790:CDS |
| AAGAGGATACAAAGATCACG+GGG | 0.691210 | 1_4:+55161241 | Msa0170790:CDS |
| GGAGCGGACAATGACTACCA+GGG | 0.693176 | 1_4:+55164455 | Msa0170790:CDS |
| TGGACTGGGAAGATATACAA+TGG | 0.693989 | 1_4:+55166079 | Msa0170790:CDS |
| GTTGATGTATGTGTGAGGCA+AGG | 0.705622 | 1_4:-55164402 | None:intergenic |
| GAATACACAAGGTTCACTTG+AGG | 0.712564 | 1_4:+55160544 | Msa0170790:CDS |
| TGAGGATCACTAGAAGACGA+CGG | 0.727788 | 1_4:-55160146 | None:intergenic |
| TACTCATTTGAAACTGACGA+CGG | 0.736005 | 1_4:-55160029 | None:intergenic |
| TTTGACAAGGAATCAGACGA+TGG | 0.737459 | 1_4:+55161151 | Msa0170790:CDS |
| CAATAGTTGATGTATGTGTG+AGG | 0.739184 | 1_4:-55164407 | None:intergenic |
| AGAGGATACAAAGATCACGG+GGG | 0.825867 | 1_4:+55161242 | Msa0170790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAATTTTCTTTTTCTTT+GGG | - | chr1_4:55160905-55160924 | None:intergenic | 10.0% |
| !!! | TTTTAAATTTTCTTTTTCTT+TGG | - | chr1_4:55160906-55160925 | None:intergenic | 10.0% |
| !!! | AGTATTAGTATTAAATTTTA+AGG | - | chr1_4:55163691-55163710 | None:intergenic | 10.0% |
| !! | TTTCCATTTAAATATTTATT+TGG | + | chr1_4:55164143-55164162 | Msa0170790:intron | 10.0% |
| !! | TATAAAATAAAATCACAATA+AGG | - | chr1_4:55165239-55165258 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAGTTTTGTTTTT+TGG | + | chr1_4:55166183-55166202 | Msa0170790:three_prime_UTR | 10.0% |
| !! | TATTAATTAATGTACTTATT+TGG | + | chr1_4:55166271-55166290 | Msa0170790:three_prime_UTR | 10.0% |
| !!! | TTAAATTTTCTTTTTCTTTG+GGG | - | chr1_4:55160904-55160923 | None:intergenic | 15.0% |
| !! | AAAAGAAAATTTAAAAGAGA+AGG | + | chr1_4:55160910-55160929 | Msa0170790:CDS | 15.0% |
| !! | TTGAATGACAATATATTTAT+TGG | - | chr1_4:55161376-55161395 | None:intergenic | 15.0% |
| !! | AAATGAAGAAAAAAAATAGA+AGG | - | chr1_4:55162119-55162138 | None:intergenic | 15.0% |
| !!! | ATTTTATATTGAAATGTTAC+TGG | - | chr1_4:55162213-55162232 | None:intergenic | 15.0% |
| !! | AAATGTGTAAAAAAGAAAAA+GGG | - | chr1_4:55162254-55162273 | None:intergenic | 15.0% |
| !! | AAAATGTGTAAAAAAGAAAA+AGG | - | chr1_4:55162255-55162274 | None:intergenic | 15.0% |
| !!! | TAATTTTATTTCACTATCAT+AGG | - | chr1_4:55162857-55162876 | None:intergenic | 15.0% |
| !! | TTGCCAAATAAATATTTAAA+TGG | - | chr1_4:55164149-55164168 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTATCTTCAGAA+AGG | + | chr1_4:55164357-55164376 | Msa0170790:intron | 15.0% |
| !!! | AACAGTTATTGATTATATTT+TGG | - | chr1_4:55164549-55164568 | None:intergenic | 15.0% |
| !!! | GTGTTTATTTTTTTTCTATT+TGG | + | chr1_4:55164662-55164681 | Msa0170790:intron | 15.0% |
| !! | TTACTAAAACAATACAAATT+GGG | - | chr1_4:55165117-55165136 | None:intergenic | 15.0% |
| !! | ATTACTAAAACAATACAAAT+TGG | - | chr1_4:55165118-55165137 | None:intergenic | 15.0% |
| !!! | TTTTTTAATTGTATGATGAT+TGG | + | chr1_4:55166021-55166040 | Msa0170790:intron | 15.0% |
| !! | AAGTACATTAATTAATATGT+TGG | - | chr1_4:55166268-55166287 | None:intergenic | 15.0% |
| !!! | AAGCAAATTTTTATTTCTAT+TGG | - | chr1_4:55166360-55166379 | None:intergenic | 15.0% |
| !! | TATCATATGTCTTATGATAT+AGG | + | chr1_4:55160050-55160069 | Msa0170790:CDS | 20.0% |
| !! | AGTCATAATAATGATTCAAA+AGG | + | chr1_4:55160380-55160399 | Msa0170790:CDS | 20.0% |
| !! | AAATTTAAAAGAGAAGGAAA+AGG | + | chr1_4:55160916-55160935 | Msa0170790:CDS | 20.0% |
| !! | AAATTGGATTCAATCTATTA+AGG | - | chr1_4:55161480-55161499 | None:intergenic | 20.0% |
| !!! | TAGATTGAATCCAATTTTTA+TGG | + | chr1_4:55161483-55161502 | Msa0170790:intron | 20.0% |
| !! | AAAAAGAACACCATAAAAAT+TGG | - | chr1_4:55161496-55161515 | None:intergenic | 20.0% |
| !! | TTATATATTGGAAAAAGCAA+AGG | - | chr1_4:55161727-55161746 | None:intergenic | 20.0% |
| !!! | TTTTTCCAATATATAAGTTC+TGG | + | chr1_4:55161731-55161750 | Msa0170790:CDS | 20.0% |
| !! | AAATACCAGAACTTATATAT+TGG | - | chr1_4:55161739-55161758 | None:intergenic | 20.0% |
| !!! | TCTTATGTTGTTTATAAAGT+TGG | + | chr1_4:55161776-55161795 | Msa0170790:CDS | 20.0% |
| !! | CAATCTCAAATTGAAAAAAA+TGG | + | chr1_4:55161848-55161867 | Msa0170790:CDS | 20.0% |
| !! | AAGAAAAAAAATAGAAGGAA+CGG | - | chr1_4:55162114-55162133 | None:intergenic | 20.0% |
| !! | TTCATGAAAATTATGAAGAA+TGG | - | chr1_4:55162310-55162329 | None:intergenic | 20.0% |
| !!! | CATAATTTTCATGAACATTT+TGG | + | chr1_4:55162315-55162334 | Msa0170790:intron | 20.0% |
| !!! | GCATTCCTTTTAATATTTAA+AGG | + | chr1_4:55162411-55162430 | Msa0170790:intron | 20.0% |
| !!! | TATTTCTTTGGAGTTTTTTT+TGG | + | chr1_4:55162896-55162915 | Msa0170790:intron | 20.0% |
| !!! | TTTTTAAACCAAAGAACTAT+AGG | + | chr1_4:55163172-55163191 | Msa0170790:intron | 20.0% |
| !! | TATCTTAGTGATTACTATTA+AGG | + | chr1_4:55163295-55163314 | Msa0170790:intron | 20.0% |
| !! | ATCTTAGTGATTACTATTAA+GGG | + | chr1_4:55163296-55163315 | Msa0170790:intron | 20.0% |
| !! | ATCATTTATGCAATGATTAT+TGG | + | chr1_4:55163371-55163390 | Msa0170790:intron | 20.0% |
| !! | TAAATAATGATTTCACAAGA+TGG | + | chr1_4:55163626-55163645 | Msa0170790:intron | 20.0% |
| !! | ATTGAAGATAATAGTGATTA+TGG | - | chr1_4:55164036-55164055 | None:intergenic | 20.0% |
| !!! | ACTGAGAATATATTTAGAAT+TGG | + | chr1_4:55164094-55164113 | Msa0170790:intron | 20.0% |
| !!! | ATATATTTAGAATTGGATTC+AGG | + | chr1_4:55164101-55164120 | Msa0170790:intron | 20.0% |
| !! | TTAATTATGTATGTAACATC+AGG | + | chr1_4:55164179-55164198 | Msa0170790:intron | 20.0% |
| !!! | AGTTATTGATTATATTTTGG+AGG | - | chr1_4:55164546-55164565 | None:intergenic | 20.0% |
| !! | ATTTCTTGAAGTTAAAGTTT+CGG | + | chr1_4:55164640-55164659 | Msa0170790:intron | 20.0% |
| !! | TGGAATTAATAACACATTTA+TGG | - | chr1_4:55164803-55164822 | None:intergenic | 20.0% |
| !!! | AAAGTGAAGTGTTATTAATA+AGG | + | chr1_4:55164827-55164846 | Msa0170790:intron | 20.0% |
| !! | AATAAGACAGTAAATACTAA+AGG | - | chr1_4:55164934-55164953 | None:intergenic | 20.0% |
| !! | TTTGAAAACATGTCAATATT+CGG | + | chr1_4:55165139-55165158 | Msa0170790:intron | 20.0% |
| !! | ACAAATACAAAATCATGATA+AGG | - | chr1_4:55165269-55165288 | None:intergenic | 20.0% |
| !!! | TTTTGTATTTGTTAATCATC+AGG | + | chr1_4:55165277-55165296 | Msa0170790:intron | 20.0% |
| ! | AAGAATCAGAAAAATACCAT+AGG | + | chr1_4:55160462-55160481 | Msa0170790:CDS | 25.0% |
| ! | AGAATCAGAAAAATACCATA+GGG | + | chr1_4:55160463-55160482 | Msa0170790:CDS | 25.0% |
| ! | AGAGAAAGATAGAAAAAGAA+AGG | + | chr1_4:55160670-55160689 | Msa0170790:CDS | 25.0% |
| !! | GTTATTTGAAACATCTTTCT+CGG | - | chr1_4:55160972-55160991 | None:intergenic | 25.0% |
| ! | TAAAGACAAGAGAAAAGAAA+GGG | + | chr1_4:55161084-55161103 | Msa0170790:CDS | 25.0% |
| ! | TTGAAGCTTCATAATTACAT+TGG | + | chr1_4:55161443-55161462 | Msa0170790:intron | 25.0% |
| !!! | TTATGGTGTTCTTTTTAGTA+TGG | + | chr1_4:55161500-55161519 | Msa0170790:intron | 25.0% |
| ! | TACTAGAATGAATATAACGA+AGG | - | chr1_4:55161527-55161546 | None:intergenic | 25.0% |
| !! | TATATAAGTTCTGGTATTTC+AGG | + | chr1_4:55161740-55161759 | Msa0170790:CDS | 25.0% |
| ! | TAAGAAAAATGAAGCTTACT+TGG | - | chr1_4:55161943-55161962 | None:intergenic | 25.0% |
| !!! | AACATTTTGGAAACTATTAG+AGG | + | chr1_4:55162328-55162347 | Msa0170790:intron | 25.0% |
| ! | GTATTTATAGTGTCTTGATA+AGG | - | chr1_4:55162371-55162390 | None:intergenic | 25.0% |
| ! | ATGTTTAATAGTAATGAACG+AGG | - | chr1_4:55162437-55162456 | None:intergenic | 25.0% |
| ! | TGTTGTATGAAACTAAATGT+TGG | + | chr1_4:55162814-55162833 | Msa0170790:intron | 25.0% |
| ! | GTTGTATGAAACTAAATGTT+GGG | + | chr1_4:55162815-55162834 | Msa0170790:intron | 25.0% |
| ! | AAAATTAGTACCGTATCTAA+TGG | + | chr1_4:55162870-55162889 | Msa0170790:intron | 25.0% |
| ! | AGAAATACAACCATTAGATA+CGG | - | chr1_4:55162883-55162902 | None:intergenic | 25.0% |
| ! | ATCTAATGGTTGTATTTCTT+TGG | + | chr1_4:55162884-55162903 | Msa0170790:intron | 25.0% |
| ! | TGATTTCTATGCAAACTTAA+TGG | - | chr1_4:55163355-55163374 | None:intergenic | 25.0% |
| ! | TAAACTAATTTACCCTAGTT+TGG | + | chr1_4:55163579-55163598 | Msa0170790:intron | 25.0% |
| !!! | TTTTAAGGATATGCAGAAAA+AGG | - | chr1_4:55163676-55163695 | None:intergenic | 25.0% |
| ! | AGAGTTACATTATTGTATTC+AGG | + | chr1_4:55163756-55163775 | Msa0170790:intron | 25.0% |
| !!! | TATTTGATTGCCTTTTTAAG+TGG | + | chr1_4:55164058-55164077 | Msa0170790:intron | 25.0% |
| !!! | ATTTGATTGCCTTTTTAAGT+GGG | + | chr1_4:55164059-55164078 | Msa0170790:intron | 25.0% |
| ! | TAATCATTACCCACTTAAAA+AGG | - | chr1_4:55164071-55164090 | None:intergenic | 25.0% |
| ! | ATTGTGAAGGTAATATCAAA+AGG | + | chr1_4:55164287-55164306 | Msa0170790:intron | 25.0% |
| ! | TGAACAGTTAGATATTAAGT+TGG | - | chr1_4:55164338-55164357 | None:intergenic | 25.0% |
| !!! | TTTTTTTATCTTCAGAAAGG+AGG | + | chr1_4:55164360-55164379 | Msa0170790:intron | 25.0% |
| !!! | GTTGGTTATGTTTTATTTTC+TGG | + | chr1_4:55164693-55164712 | Msa0170790:intron | 25.0% |
| !!! | AATAACACTTCACTTTTCAT+TGG | - | chr1_4:55164823-55164842 | None:intergenic | 25.0% |
| !!! | GTATTTACTGTCTTATTTTG+CGG | + | chr1_4:55164937-55164956 | Msa0170790:intron | 25.0% |
| ! | TTGCATCTATCATCTAATAT+AGG | - | chr1_4:55165200-55165219 | None:intergenic | 25.0% |
| ! | TACAAAATCATGATAAGGAT+AGG | - | chr1_4:55165264-55165283 | None:intergenic | 25.0% |
| ! | TAAGTTCAAAGAATTCATGA+AGG | + | chr1_4:55165648-55165667 | Msa0170790:intron | 25.0% |
| ! | TATTTGTCTTTCACTTCTAT+TGG | + | chr1_4:55166214-55166233 | Msa0170790:three_prime_UTR | 25.0% |
| ! | ATTTGTCTTTCACTTCTATT+GGG | + | chr1_4:55166215-55166234 | Msa0170790:three_prime_UTR | 25.0% |
| TATGTCTTATGATATAGGTC+AGG | + | chr1_4:55160055-55160074 | Msa0170790:CDS | 30.0% | |
| !! | CAGAATATATTTTTGCCCTA+TGG | - | chr1_4:55160481-55160500 | None:intergenic | 30.0% |
| AAAATATATTCTGATCCTCC+TGG | + | chr1_4:55160488-55160507 | Msa0170790:CDS | 30.0% | |
| !! | TTTAGATCTATCGTCACTTT+TGG | - | chr1_4:55160651-55160670 | None:intergenic | 30.0% |
| AATATACAAGTTAGCAACAC+AGG | + | chr1_4:55160749-55160768 | Msa0170790:CDS | 30.0% | |
| AACAAGATAGAGATGTTGAA+AGG | + | chr1_4:55160855-55160874 | Msa0170790:CDS | 30.0% | |
| AGATGTTTCAAATAACGAGA+AGG | + | chr1_4:55160976-55160995 | Msa0170790:CDS | 30.0% | |
| CTAAAGACAAGAGAAAAGAA+AGG | + | chr1_4:55161083-55161102 | Msa0170790:CDS | 30.0% | |
| AGTGAAGTCTATAACTATAG+TGG | + | chr1_4:55161208-55161227 | Msa0170790:CDS | 30.0% | |
| TAGCAAACAATGAAACATGA+AGG | - | chr1_4:55161343-55161362 | None:intergenic | 30.0% | |
| TTCATTCTAGTAACTATAGC+TGG | + | chr1_4:55161535-55161554 | Msa0170790:intron | 30.0% | |
| !! | ATGCTATCATTTTGTTTCAG+TGG | + | chr1_4:55161583-55161602 | Msa0170790:CDS | 30.0% |
| ATTGGAAAAAGCAAAGGAAA+AGG | - | chr1_4:55161721-55161740 | None:intergenic | 30.0% | |
| ATTTGTAGCAGTAACATACT+CGG | - | chr1_4:55161918-55161937 | None:intergenic | 30.0% | |
| ACAATCAAAGGCTCAATTAA+AGG | - | chr1_4:55162281-55162300 | None:intergenic | 30.0% | |
| CGAGGCCTTTAAATATTAAA+AGG | - | chr1_4:55162419-55162438 | None:intergenic | 30.0% | |
| TACTATTAAACATTCACCGT+TGG | + | chr1_4:55162444-55162463 | Msa0170790:intron | 30.0% | |
| ! | ATTGCTTCCTTTGTTTATGA+AGG | + | chr1_4:55162525-55162544 | Msa0170790:intron | 30.0% |
| TTAACGTCCTTCATAAACAA+AGG | - | chr1_4:55162535-55162554 | None:intergenic | 30.0% | |
| TCGTTCTATATGATAGACTT+GGG | - | chr1_4:55162667-55162686 | None:intergenic | 30.0% | |
| ATCGTTCTATATGATAGACT+TGG | - | chr1_4:55162668-55162687 | None:intergenic | 30.0% | |
| AAGTCTATCATATAGAACGA+TGG | + | chr1_4:55162667-55162686 | Msa0170790:intron | 30.0% | |
| AGTCTATCATATAGAACGAT+GGG | + | chr1_4:55162668-55162687 | Msa0170790:intron | 30.0% | |
| TCTATATTCTGCCAATAATC+CGG | + | chr1_4:55163023-55163042 | Msa0170790:intron | 30.0% | |
| GAAGATTCAGATACATCAAA+AGG | - | chr1_4:55163051-55163070 | None:intergenic | 30.0% | |
| AAATACGCAGTCTTAAATAG+AGG | - | chr1_4:55163084-55163103 | None:intergenic | 30.0% | |
| AGGAAGACTTCAATAATAAC+AGG | - | chr1_4:55163126-55163145 | None:intergenic | 30.0% | |
| GTTATTATTGAAGTCTTCCT+TGG | + | chr1_4:55163126-55163145 | Msa0170790:intron | 30.0% | |
| GGTTTAAAAATAGCAAGCAA+GGG | - | chr1_4:55163162-55163181 | None:intergenic | 30.0% | |
| TGGTTTAAAAATAGCAAGCA+AGG | - | chr1_4:55163163-55163182 | None:intergenic | 30.0% | |
| ! | TGTAAGATAGAAGTATAGGA+TGG | - | chr1_4:55163242-55163261 | None:intergenic | 30.0% |
| ! | ATGCTGTAAGATAGAAGTAT+AGG | - | chr1_4:55163246-55163265 | None:intergenic | 30.0% |
| ! | CAATGATTATTGGACTAGAT+TGG | + | chr1_4:55163381-55163400 | Msa0170790:intron | 30.0% |
| AAAGAATTTCAACCAGATGA+TGG | - | chr1_4:55163436-55163455 | None:intergenic | 30.0% | |
| TATGCTATTGTGAAAATCTG+AGG | + | chr1_4:55163530-55163549 | Msa0170790:intron | 30.0% | |
| TAAATCTTCATGCCAAACTA+GGG | - | chr1_4:55163594-55163613 | None:intergenic | 30.0% | |
| ATAAATCTTCATGCCAAACT+AGG | - | chr1_4:55163595-55163614 | None:intergenic | 30.0% | |
| ! | TGGTATGTCTTTTACAAAAC+TGG | + | chr1_4:55163837-55163856 | Msa0170790:intron | 30.0% |
| ! | TTTTACAAAACTGGTGCATT+AGG | + | chr1_4:55163846-55163865 | Msa0170790:intron | 30.0% |
| TTTACAAAACTGGTGCATTA+GGG | + | chr1_4:55163847-55163866 | Msa0170790:intron | 30.0% | |
| ! | TGTATGGACATACAATCTTT+TGG | - | chr1_4:55164012-55164031 | None:intergenic | 30.0% |
| TAATAGTGATTATGGCTGTA+TGG | - | chr1_4:55164028-55164047 | None:intergenic | 30.0% | |
| !! | CTGTTATGTTGTTTCATAGA+TGG | + | chr1_4:55164564-55164583 | Msa0170790:intron | 30.0% |
| !! | TCATTTTTCAGAATGCATTG+CGG | + | chr1_4:55164963-55164982 | Msa0170790:intron | 30.0% |
| AATCTAATATTGTGCTGTGT+TGG | + | chr1_4:55165075-55165094 | Msa0170790:intron | 30.0% | |
| !! | AAAGGGAGAAGTTTTGTATT+TGG | + | chr1_4:55165371-55165390 | Msa0170790:CDS | 30.0% |
| TGGATATTTGCACTATGATT+AGG | + | chr1_4:55166041-55166060 | Msa0170790:intron | 30.0% | |
| TTTGTCTTTCACTTCTATTG+GGG | + | chr1_4:55166216-55166235 | Msa0170790:three_prime_UTR | 30.0% | |
| TAACCGTTCTACATAAACTA+TGG | - | chr1_4:55166326-55166345 | None:intergenic | 30.0% | |
| GACTCTTCATGAGATTTCTT+AGG | - | chr1_4:55159951-55159970 | None:intergenic | 35.0% | |
| ! | TACTCATTTGAAACTGACGA+CGG | - | chr1_4:55160032-55160051 | None:intergenic | 35.0% |
| ATGATATAGGTCAGGATTCT+CGG | + | chr1_4:55160063-55160082 | Msa0170790:CDS | 35.0% | |
| TGAGAAGAGGTTAGAATCAA+GGG | + | chr1_4:55160190-55160209 | Msa0170790:CDS | 35.0% | |
| GATGTTTGGAGAAGTAAGAA+AGG | + | chr1_4:55160274-55160293 | Msa0170790:CDS | 35.0% | |
| !! | TTTTCACTTTTAGCACTCTG+AGG | - | chr1_4:55160302-55160321 | None:intergenic | 35.0% |
| ! | TCAGAGTGCTAAAAGTGAAA+AGG | + | chr1_4:55160301-55160320 | Msa0170790:CDS | 35.0% |
| AGGTGATACTAAGACAGAAA+AGG | + | chr1_4:55160400-55160419 | Msa0170790:CDS | 35.0% | |
| !!! | GATAGTTTTAATGCAGCTAG+CGG | + | chr1_4:55160422-55160441 | Msa0170790:CDS | 35.0% |
| ATTCTTTCCAATCCAAGTGA+AGG | - | chr1_4:55160448-55160467 | None:intergenic | 35.0% | |
| GTACAAGTAAGCAATACGAT+TGG | + | chr1_4:55160812-55160831 | Msa0170790:CDS | 35.0% | |
| !! | ACATCTCTATCTTGTTTCTG+AGG | - | chr1_4:55160851-55160870 | None:intergenic | 35.0% |
| AAGATAGAGATGTTGAAAGG+TGG | + | chr1_4:55160858-55160877 | Msa0170790:CDS | 35.0% | |
| AGATAGAGATGTTGAAAGGT+GGG | + | chr1_4:55160859-55160878 | Msa0170790:CDS | 35.0% | |
| TGAACAAGAAACTGTCTTAC+CGG | + | chr1_4:55161027-55161046 | Msa0170790:CDS | 35.0% | |
| !! | TCTTTTTGTTTCTTCTGCTC+CGG | - | chr1_4:55161049-55161068 | None:intergenic | 35.0% |
| GTGATCTTTGTATCCTCTTA+CGG | - | chr1_4:55161240-55161259 | None:intergenic | 35.0% | |
| GTAAGAGGATACAAAGATCA+CGG | + | chr1_4:55161239-55161258 | Msa0170790:CDS | 35.0% | |
| TAAGAGGATACAAAGATCAC+GGG | + | chr1_4:55161240-55161259 | Msa0170790:CDS | 35.0% | |
| ACAATGAAACATGAAGGAAG+AGG | - | chr1_4:55161337-55161356 | None:intergenic | 35.0% | |
| GCCAGCAATTGATTATCAAT+GGG | - | chr1_4:55161649-55161668 | None:intergenic | 35.0% | |
| TGCCAGCAATTGATTATCAA+TGG | - | chr1_4:55161650-55161669 | None:intergenic | 35.0% | |
| ! | TGGTATTTCAGGTAAAGTAG+AGG | + | chr1_4:55161751-55161770 | Msa0170790:CDS | 35.0% |
| ! | AATGGTGAAAGCTCTAACAA+TGG | + | chr1_4:55161866-55161885 | Msa0170790:CDS | 35.0% |
| ATATCCGAATTTCCAGAGTA+GGG | - | chr1_4:55161892-55161911 | None:intergenic | 35.0% | |
| ATTGAGCCTTTGATTGTAGT+TGG | + | chr1_4:55162284-55162303 | Msa0170790:intron | 35.0% | |
| !! | ATTAGAGGCCTTTTCTAAAG+AGG | + | chr1_4:55162343-55162362 | Msa0170790:intron | 35.0% |
| ! | ATAAGGTGCCTCTTTAGAAA+AGG | - | chr1_4:55162354-55162373 | None:intergenic | 35.0% |
| AGTTTAACAGACAAAGCCAA+CGG | - | chr1_4:55162463-55162482 | None:intergenic | 35.0% | |
| !! | AACTTGCTGATATCTGTGTT+TGG | + | chr1_4:55162479-55162498 | Msa0170790:intron | 35.0% |
| ! | ACTTGCTGATATCTGTGTTT+GGG | + | chr1_4:55162480-55162499 | Msa0170790:intron | 35.0% |
| CGTTCTATATGATAGACTTG+GGG | - | chr1_4:55162666-55162685 | None:intergenic | 35.0% | |
| GTCTATCATATAGAACGATG+GGG | + | chr1_4:55162669-55162688 | Msa0170790:intron | 35.0% | |
| TCTATCATATAGAACGATGG+GGG | + | chr1_4:55162670-55162689 | Msa0170790:intron | 35.0% | |
| TAAATGTTGGGCAGAAATAG+AGG | + | chr1_4:55162827-55162846 | Msa0170790:intron | 35.0% | |
| AAATGTTGGGCAGAAATAGA+GGG | + | chr1_4:55162828-55162847 | Msa0170790:intron | 35.0% | |
| !! | ATCAAAAGGTACCGGATTAT+TGG | - | chr1_4:55163037-55163056 | None:intergenic | 35.0% |
| ! | TCAGATACATCAAAAGGTAC+CGG | - | chr1_4:55163045-55163064 | None:intergenic | 35.0% |
| CTTAAATAGAGGTGGAACTA+TGG | - | chr1_4:55163073-55163092 | None:intergenic | 35.0% | |
| AGTTCAGACCTATAGTTCTT+TGG | - | chr1_4:55163183-55163202 | None:intergenic | 35.0% | |
| TGATTACTATTAAGGGTGAG+TGG | + | chr1_4:55163303-55163322 | Msa0170790:intron | 35.0% | |
| CTATGCAAACTTAATGGCTA+TGG | - | chr1_4:55163349-55163368 | None:intergenic | 35.0% | |
| ! | TATTGTGAAAATCTGAGGCT+TGG | + | chr1_4:55163535-55163554 | Msa0170790:intron | 35.0% |
| TTAGTTTACGATAGTAGCAC+TGG | - | chr1_4:55163567-55163586 | None:intergenic | 35.0% | |
| CATTATTGTATTCAGGTCAG+AGG | + | chr1_4:55163763-55163782 | Msa0170790:intron | 35.0% | |
| ! | TAGGGTGTTCTTACATATAC+TGG | + | chr1_4:55163865-55163884 | Msa0170790:intron | 35.0% |
| ! | ATGGACATACAATCTTTTGG+AGG | - | chr1_4:55164009-55164028 | None:intergenic | 35.0% |
| ! | TTTTATCTTCAGAAAGGAGG+TGG | + | chr1_4:55164363-55164382 | Msa0170790:intron | 35.0% |
| ! | CAATAGTTGATGTATGTGTG+AGG | - | chr1_4:55164410-55164429 | None:intergenic | 35.0% |
| ! | TTATTGAGAAGCACAAATGC+AGG | - | chr1_4:55164602-55164621 | None:intergenic | 35.0% |
| TTCTATTTGGACTGTTCAGT+TGG | + | chr1_4:55164675-55164694 | Msa0170790:intron | 35.0% | |
| ! | TTGTGCTTTGTTATGCTTTC+AGG | + | chr1_4:55164725-55164744 | Msa0170790:intron | 35.0% |
| AGACAGTAAATACTAAAGGC+CGG | - | chr1_4:55164930-55164949 | None:intergenic | 35.0% | |
| CAACATAAACTACCATACCA+AGG | - | chr1_4:55165040-55165059 | None:intergenic | 35.0% | |
| CTTGGTATGGTAGTTTATGT+TGG | + | chr1_4:55165038-55165057 | Msa0170790:intron | 35.0% | |
| CAATATTCGGCTATGCAATA+TGG | + | chr1_4:55165152-55165171 | Msa0170790:intron | 35.0% | |
| ! | TATAAGCATTGTAGCAGACA+AGG | + | chr1_4:55165311-55165330 | Msa0170790:CDS | 35.0% |
| ! | ATAAGCATTGTAGCAGACAA+GGG | + | chr1_4:55165312-55165331 | Msa0170790:CDS | 35.0% |
| ACATCTGCTCGATTGAAAAA+GGG | + | chr1_4:55165354-55165373 | Msa0170790:CDS | 35.0% | |
| AACTTCCATGTCAAAATACC+TGG | - | chr1_4:55165409-55165428 | None:intergenic | 35.0% | |
| ATAGTTAAAAGAACACCAGG+AGG | - | chr1_4:55165699-55165718 | None:intergenic | 35.0% | |
| CTCATAGTTAAAAGAACACC+AGG | - | chr1_4:55165702-55165721 | None:intergenic | 35.0% | |
| !! | TTGTTTTGCTGGAGAGAAAT+TGG | + | chr1_4:55165745-55165764 | Msa0170790:CDS | 35.0% |
| ! | TTTTCACCATTTGCAGAATG+TGG | - | chr1_4:55165833-55165852 | None:intergenic | 35.0% |
| GCATCAATCATAACATGATC+AGG | - | chr1_4:55165863-55165882 | None:intergenic | 35.0% | |
| ATGTTATGATTGATGCGTTC+CGG | + | chr1_4:55165867-55165886 | Msa0170790:CDS | 35.0% | |
| TTTGCACTATGATTAGGTGT+TGG | + | chr1_4:55166047-55166066 | Msa0170790:intron | 35.0% | |
| GATATACAATGGTCTCAAAC+TGG | + | chr1_4:55166090-55166109 | Msa0170790:CDS | 35.0% | |
| AAAGGAATATACCCTTGCAA+GGG | + | chr1_4:55166128-55166147 | Msa0170790:CDS | 35.0% | |
| TTGTCTTTCACTTCTATTGG+GGG | + | chr1_4:55166217-55166236 | Msa0170790:three_prime_UTR | 35.0% | |
| CAGCCATAGTTTATGTAGAA+CGG | + | chr1_4:55166320-55166339 | Msa0170790:three_prime_UTR | 35.0% | |
| TGATATAGGTCAGGATTCTC+GGG | + | chr1_4:55160064-55160083 | Msa0170790:CDS | 40.0% | |
| CTCCTCTTCATTCAGTGTAT+CGG | + | chr1_4:55160120-55160139 | Msa0170790:CDS | 40.0% | |
| ATCCGATACACTGAATGAAG+AGG | - | chr1_4:55160125-55160144 | None:intergenic | 40.0% | |
| CTTGATTCTAACCTCTTCTC+AGG | - | chr1_4:55160191-55160210 | None:intergenic | 40.0% | |
| CTGAGAAGAGGTTAGAATCA+AGG | + | chr1_4:55160189-55160208 | Msa0170790:CDS | 40.0% | |
| GTTAGAATCAAGGGAATCCA+AGG | + | chr1_4:55160199-55160218 | Msa0170790:CDS | 40.0% | |
| CCAAGGATAGTAGAGATATC+CGG | + | chr1_4:55160216-55160235 | Msa0170790:CDS | 40.0% | |
| TCGTATCACGATTCTCAAAC+CGG | - | chr1_4:55160238-55160257 | None:intergenic | 40.0% | |
| TGATACGAAGACTGAGAAGA+AGG | + | chr1_4:55160250-55160269 | Msa0170790:CDS | 40.0% | |
| ACTGAGAAGAAGGAGATGTT+TGG | + | chr1_4:55160260-55160279 | Msa0170790:CDS | 40.0% | |
| GAAAAGGATGCACATGTTGA+AGG | + | chr1_4:55160317-55160336 | Msa0170790:CDS | 40.0% | |
| TGTGTATTCCCACGTAACAT+AGG | - | chr1_4:55160533-55160552 | None:intergenic | 40.0% | |
| ATGTTACGTGGGAATACACA+AGG | + | chr1_4:55160533-55160552 | Msa0170790:CDS | 40.0% | |
| GAATACACAAGGTTCACTTG+AGG | + | chr1_4:55160544-55160563 | Msa0170790:CDS | 40.0% | |
| AAAGAAAGGAAGTGAAGCAC+CGG | + | chr1_4:55160684-55160703 | Msa0170790:CDS | 40.0% | |
| GTAAGCAATACGATTGGTGA+CGG | + | chr1_4:55160818-55160837 | Msa0170790:CDS | 40.0% | |
| AGGAAAAGGATCAGATGAAG+AGG | + | chr1_4:55160930-55160949 | Msa0170790:CDS | 40.0% | |
| GGAAAAGGATCAGATGAAGA+GGG | + | chr1_4:55160931-55160950 | Msa0170790:CDS | 40.0% | |
| GGTAAGACAGTTTCTTGTTC+AGG | - | chr1_4:55161028-55161047 | None:intergenic | 40.0% | |
| ! | GAAAGGGAAGCTGATTTAGT+AGG | + | chr1_4:55161100-55161119 | Msa0170790:CDS | 40.0% |
| ! | AAGCTGATTTAGTAGGAGAC+AGG | + | chr1_4:55161107-55161126 | Msa0170790:CDS | 40.0% |
| TTTGACAAGGAATCAGACGA+TGG | + | chr1_4:55161151-55161170 | Msa0170790:CDS | 40.0% | |
| AAGAGGATACAAAGATCACG+GGG | + | chr1_4:55161241-55161260 | Msa0170790:CDS | 40.0% | |
| ! | AAAGTACCCTTCGTTGTCTT+GGG | - | chr1_4:55161311-55161330 | None:intergenic | 40.0% |
| TAGCTGGACATATATGTTGC+AGG | + | chr1_4:55161551-55161570 | Msa0170790:intron | 40.0% | |
| CATATATGTTGCAGGTCTCA+AGG | + | chr1_4:55161559-55161578 | Msa0170790:intron | 40.0% | |
| TTTGTTTCAGTGGCTCATGA+AGG | + | chr1_4:55161593-55161612 | Msa0170790:CDS | 40.0% | |
| ! | GCCCATTGATAATCAATTGC+TGG | + | chr1_4:55161645-55161664 | Msa0170790:CDS | 40.0% |
| TGCAAGAGCTGATAAAGTTG+TGG | + | chr1_4:55161807-55161826 | Msa0170790:CDS | 40.0% | |
| AGAGCTGATAAAGTTGTGGA+CGG | + | chr1_4:55161811-55161830 | Msa0170790:CDS | 40.0% | |
| GATATCCGAATTTCCAGAGT+AGG | - | chr1_4:55161893-55161912 | None:intergenic | 40.0% | |
| GCAAGCAGAAGATGAAACAA+AGG | - | chr1_4:55162144-55162163 | None:intergenic | 40.0% | |
| GAATGGCCAACTACAATCAA+AGG | - | chr1_4:55162293-55162312 | None:intergenic | 40.0% | |
| TATATGATAGACTTGGGGTG+TGG | - | chr1_4:55162661-55162680 | None:intergenic | 40.0% | |
| ! | TCCATTTCATCCGTCTTGTT+GGG | - | chr1_4:55162723-55162742 | None:intergenic | 40.0% |
| !! | AGAAAGTATCGCTCAAGCTA+AGG | + | chr1_4:55162763-55162782 | Msa0170790:intron | 40.0% |
| ! | TGTTGTTTGTCTCTTCATCC+AGG | + | chr1_4:55162981-55163000 | Msa0170790:intron | 40.0% |
| TACGCAGTCTTAAATAGAGG+TGG | - | chr1_4:55163081-55163100 | None:intergenic | 40.0% | |
| AGTTAGTCAATGGAGCTGAA+TGG | + | chr1_4:55163482-55163501 | Msa0170790:intron | 40.0% | |
| GTTAGTCAATGGAGCTGAAT+GGG | + | chr1_4:55163483-55163502 | Msa0170790:intron | 40.0% | |
| TTAGTCAATGGAGCTGAATG+GGG | + | chr1_4:55163484-55163503 | Msa0170790:intron | 40.0% | |
| TATTGTATTCAGGTCAGAGG+TGG | + | chr1_4:55163766-55163785 | Msa0170790:intron | 40.0% | |
| AGACATACCAGCAACAAGAT+CGG | - | chr1_4:55163827-55163846 | None:intergenic | 40.0% | |
| AAGAATTACGCGCAACCATT+CGG | + | chr1_4:55163977-55163996 | Msa0170790:CDS | 40.0% | |
| GCTGCAGTTATCGAATTGAA+CGG | + | chr1_4:55164258-55164277 | Msa0170790:CDS | 40.0% | |
| ATAGATGCTGAAACAAACCG+AGG | - | chr1_4:55164487-55164506 | None:intergenic | 40.0% | |
| ! | TGCTTTGTTATGCTTTCAGG+TGG | + | chr1_4:55164728-55164747 | Msa0170790:intron | 40.0% |
| GACAGTAAATACTAAAGGCC+GGG | - | chr1_4:55164929-55164948 | None:intergenic | 40.0% | |
| ACAATCTTTGCAATGAGCCT+TGG | + | chr1_4:55165020-55165039 | Msa0170790:CDS | 40.0% | |
| AATCGAGCAGATGTGTATTG+TGG | - | chr1_4:55165348-55165367 | None:intergenic | 40.0% | |
| CACATCTGCTCGATTGAAAA+AGG | + | chr1_4:55165353-55165372 | Msa0170790:CDS | 40.0% | |
| !!! | AGATACGAGCTTTGTTTTGC+TGG | + | chr1_4:55165734-55165753 | Msa0170790:intron | 40.0% |
| AATACCTCGACATGTTCAAG+AGG | - | chr1_4:55165953-55165972 | None:intergenic | 40.0% | |
| ! | TGGACTGGGAAGATATACAA+TGG | + | chr1_4:55166079-55166098 | Msa0170790:CDS | 40.0% |
| AATGGTCTCAAACTGGTGTT+TGG | + | chr1_4:55166097-55166116 | Msa0170790:CDS | 40.0% | |
| GAAAGGAATATACCCTTGCA+AGG | + | chr1_4:55166127-55166146 | Msa0170790:CDS | 40.0% | |
| !!! | TCATGCGGGTGTTTTGAAGA+CGG | - | chr1_4:55159981-55160000 | None:intergenic | 45.0% |
| TGAGGATCACTAGAAGACGA+CGG | - | chr1_4:55160149-55160168 | None:intergenic | 45.0% | |
| CCGGATATCTCTACTATCCT+TGG | - | chr1_4:55160219-55160238 | None:intergenic | 45.0% | |
| GATGCACATGTTGAAGGTAG+AGG | + | chr1_4:55160323-55160342 | Msa0170790:CDS | 45.0% | |
| AGGTAGAGGAGATGACAACA+AGG | + | chr1_4:55160337-55160356 | Msa0170790:CDS | 45.0% | |
| ACACAAGGTTCACTTGAGGT+TGG | + | chr1_4:55160548-55160567 | Msa0170790:CDS | 45.0% | |
| AGGTTCACTTGAGGTTGGAA+AGG | + | chr1_4:55160553-55160572 | Msa0170790:CDS | 45.0% | |
| AGAGTTCATCAGCAGAACCT+AGG | + | chr1_4:55160576-55160595 | Msa0170790:CDS | 45.0% | |
| GAGTTCATCAGCAGAACCTA+GGG | + | chr1_4:55160577-55160596 | Msa0170790:CDS | 45.0% | |
| ! | AAGAAAGGAAGTGAAGCACC+GGG | + | chr1_4:55160685-55160704 | Msa0170790:CDS | 45.0% |
| TTAGCAACACAGGTAGTGAC+TGG | + | chr1_4:55160759-55160778 | Msa0170790:CDS | 45.0% | |
| AGATGTTGAAAGGTGGGAGA+GGG | + | chr1_4:55160865-55160884 | Msa0170790:CDS | 45.0% | |
| AACGAGAAGGAACCTGTTGA+TGG | + | chr1_4:55160989-55161008 | Msa0170790:CDS | 45.0% | |
| ! | ACCTGTTGATGGATCAGCTA+AGG | + | chr1_4:55161000-55161019 | Msa0170790:CDS | 45.0% |
| ACCTTAGCTGATCCATCAAC+AGG | - | chr1_4:55161004-55161023 | None:intergenic | 45.0% | |
| ACAGGTCTGATAAGCGTAGT+AGG | + | chr1_4:55161125-55161144 | Msa0170790:CDS | 45.0% | |
| CAGGTCTGATAAGCGTAGTA+GGG | + | chr1_4:55161126-55161145 | Msa0170790:CDS | 45.0% | |
| AGGTCTGATAAGCGTAGTAG+GGG | + | chr1_4:55161127-55161146 | Msa0170790:CDS | 45.0% | |
| AGAGGATACAAAGATCACGG+GGG | + | chr1_4:55161242-55161261 | Msa0170790:CDS | 45.0% | |
| !! | GAAAGTACCCTTCGTTGTCT+TGG | - | chr1_4:55161312-55161331 | None:intergenic | 45.0% |
| ! | GTGCCGGCAGAAATTGTTAT+TGG | + | chr1_4:55161623-55161642 | Msa0170790:CDS | 45.0% |
| GGGCCAATAACAATTTCTGC+CGG | - | chr1_4:55161629-55161648 | None:intergenic | 45.0% | |
| CAATTGCTGGCACTGTTTAG+CGG | + | chr1_4:55161658-55161677 | Msa0170790:CDS | 45.0% | |
| ! | ATGGCCCTACTCTGGAAATT+CGG | + | chr1_4:55161885-55161904 | Msa0170790:CDS | 45.0% |
| !! | CTCATCGACTGCGTTTCTTT+TGG | + | chr1_4:55161987-55162006 | Msa0170790:intron | 45.0% |
| ! | ATCGACTGCGTTTCTTTTGG+TGG | + | chr1_4:55161990-55162009 | Msa0170790:intron | 45.0% |
| TAGAACGATGGGGGAAACAT+AGG | + | chr1_4:55162679-55162698 | Msa0170790:intron | 45.0% | |
| AGAACGATGGGGGAAACATA+GGG | + | chr1_4:55162680-55162699 | Msa0170790:intron | 45.0% | |
| ACCATAGGATCCCAACAAGA+CGG | + | chr1_4:55162710-55162729 | Msa0170790:intron | 45.0% | |
| TCCCAACAAGACGGATGAAA+TGG | + | chr1_4:55162719-55162738 | Msa0170790:intron | 45.0% | |
| CTCCATTTCATCCGTCTTGT+TGG | - | chr1_4:55162724-55162743 | None:intergenic | 45.0% | |
| CAACAAGACGGATGAAATGG+AGG | + | chr1_4:55162722-55162741 | Msa0170790:intron | 45.0% | |
| ! | ATTGATGTCTCAGAGCATCC+TGG | - | chr1_4:55163002-55163021 | None:intergenic | 45.0% |
| GCAAGGGACTTAAACTTCCA+AGG | - | chr1_4:55163146-55163165 | None:intergenic | 45.0% | |
| ! | TTGGACTAGATTGGCTAGTC+TGG | + | chr1_4:55163390-55163409 | Msa0170790:intron | 45.0% |
| CTGGTCCAAATAACTGCAGT+CGG | + | chr1_4:55163409-55163428 | Msa0170790:intron | 45.0% | |
| TGGTCCAAATAACTGCAGTC+GGG | + | chr1_4:55163410-55163429 | Msa0170790:intron | 45.0% | |
| TCGAGACTCGAGTTAGTCAA+TGG | + | chr1_4:55163472-55163491 | Msa0170790:intron | 45.0% | |
| TATGACTCCGATCTTGTTGC+TGG | + | chr1_4:55163817-55163836 | Msa0170790:CDS | 45.0% | |
| AATTCTTGTATGGCTGCAGG+AGG | - | chr1_4:55163964-55163983 | None:intergenic | 45.0% | |
| CGTAATTCTTGTATGGCTGC+AGG | - | chr1_4:55163967-55163986 | None:intergenic | 45.0% | |
| GGTTGCGCGTAATTCTTGTA+TGG | - | chr1_4:55163974-55163993 | None:intergenic | 45.0% | |
| AGAATTACGCGCAACCATTC+GGG | + | chr1_4:55163978-55163997 | Msa0170790:CDS | 45.0% | |
| !! | AATTTTAGCACCCCAAGCAC+GGG | - | chr1_4:55164237-55164256 | None:intergenic | 45.0% |
| !! | CAATTTTAGCACCCCAAGCA+CGG | - | chr1_4:55164238-55164257 | None:intergenic | 45.0% |
| !! | TGAACGGTGTTGCATTGTGA+AGG | + | chr1_4:55164274-55164293 | Msa0170790:CDS | 45.0% |
| GTTGATGTATGTGTGAGGCA+AGG | - | chr1_4:55164405-55164424 | None:intergenic | 45.0% | |
| TACCATGCTTCAACACGTGT+AGG | - | chr1_4:55164879-55164898 | None:intergenic | 45.0% | |
| CTTTGCAATGAGCCTTGGTA+TGG | + | chr1_4:55165025-55165044 | Msa0170790:intron | 45.0% | |
| TCGGCTATGCAATATGGATC+AGG | + | chr1_4:55165158-55165177 | Msa0170790:intron | 45.0% | |
| !!! | CACGACCAGGTATTTTGACA+TGG | + | chr1_4:55165401-55165420 | Msa0170790:intron | 45.0% |
| GTCATGTAGAAAAAGCCTCC+TGG | + | chr1_4:55165681-55165700 | Msa0170790:intron | 45.0% | |
| TGCTGGAGAGAAATTGGTCA+AGG | + | chr1_4:55165751-55165770 | Msa0170790:CDS | 45.0% | |
| GAATGAATCAGGCGTAGAGA+AGG | + | chr1_4:55165793-55165812 | Msa0170790:CDS | 45.0% | |
| CACCATCCACATTCTGCAAA+TGG | + | chr1_4:55165824-55165843 | Msa0170790:CDS | 45.0% | |
| CACCATTTGCAGAATGTGGA+TGG | - | chr1_4:55165829-55165848 | None:intergenic | 45.0% | |
| TTATGATTGATGCGTTCCGG+TGG | + | chr1_4:55165870-55165889 | Msa0170790:CDS | 45.0% | |
| ATCGTGCGCATCAATTTCTG+TGG | - | chr1_4:55165917-55165936 | None:intergenic | 45.0% | |
| CAGAAATTGATGCGCACGAT+TGG | + | chr1_4:55165917-55165936 | Msa0170790:CDS | 45.0% | |
| !! | GCACTATGATTAGGTGTTGG+AGG | + | chr1_4:55166050-55166069 | Msa0170790:intron | 45.0% |
| !! | TTAGGTGTTGGAGGAGAACT+TGG | + | chr1_4:55166059-55166078 | Msa0170790:intron | 45.0% |
| CAAACTGGTGTTTGGATTGC+AGG | + | chr1_4:55166105-55166124 | Msa0170790:CDS | 45.0% | |
| TGGTGTTTGGATTGCAGGAA+AGG | + | chr1_4:55166110-55166129 | Msa0170790:CDS | 45.0% | |
| CAAGAAATGCACCCTTGCAA+GGG | - | chr1_4:55166142-55166161 | None:intergenic | 45.0% | |
| ACAAGAAATGCACCCTTGCA+AGG | - | chr1_4:55166143-55166162 | None:intergenic | 45.0% | |
| AAAACACCCGCATGAAGACG+CGG | + | chr1_4:55159986-55160005 | Msa0170790:CDS | 50.0% | |
| ! | ACTGACGACGGCGCTAATTT+TGG | - | chr1_4:55160020-55160039 | None:intergenic | 50.0% |
| !! | GATAAAAGCGCCTCGTGATG+CGG | + | chr1_4:55160088-55160107 | Msa0170790:CDS | 50.0% |
| ATCCTGTTGGTCCTGAGAAG+AGG | + | chr1_4:55160177-55160196 | Msa0170790:CDS | 50.0% | |
| AACCTCTTCTCAGGACCAAC+AGG | - | chr1_4:55160182-55160201 | None:intergenic | 50.0% | |
| AACCCTGGCCTATGTTACGT+GGG | + | chr1_4:55160522-55160541 | Msa0170790:CDS | 50.0% | |
| TTCCCACGTAACATAGGCCA+GGG | - | chr1_4:55160527-55160546 | None:intergenic | 50.0% | |
| ATTCCCACGTAACATAGGCC+AGG | - | chr1_4:55160528-55160547 | None:intergenic | 50.0% | |
| TCAGCAGAACCTAGGGAGTA+TGG | + | chr1_4:55160584-55160603 | Msa0170790:CDS | 50.0% | |
| GAGATGTTGAAAGGTGGGAG+AGG | + | chr1_4:55160864-55160883 | Msa0170790:CDS | 50.0% | |
| ATCAGATGAAGAGGGAGTCG+TGG | + | chr1_4:55160939-55160958 | Msa0170790:CDS | 50.0% | |
| ATGAAGAGGGAGTCGTGGAA+TGG | + | chr1_4:55160944-55160963 | Msa0170790:CDS | 50.0% | |
| TCAGACGATGGATGTGCTGA+TGG | + | chr1_4:55161163-55161182 | Msa0170790:CDS | 50.0% | |
| ! | CAGACGATGGATGTGCTGAT+GGG | + | chr1_4:55161164-55161183 | Msa0170790:CDS | 50.0% |
| ATAGTGGTCAGCACCGTAAG+AGG | + | chr1_4:55161224-55161243 | Msa0170790:CDS | 50.0% | |
| AGTGGCTCATGAAGGAACAC+TGG | + | chr1_4:55161601-55161620 | Msa0170790:CDS | 50.0% | |
| TCATGAAGGAACACTGGTGC+CGG | + | chr1_4:55161607-55161626 | Msa0170790:CDS | 50.0% | |
| CTCTAACAATGGCCCTACTC+TGG | + | chr1_4:55161877-55161896 | Msa0170790:CDS | 50.0% | |
| GATAGACTTGGGGTGTGGTA+TGG | - | chr1_4:55162656-55162675 | None:intergenic | 50.0% | |
| GAACGATGGGGGAAACATAG+GGG | + | chr1_4:55162681-55162700 | Msa0170790:intron | 50.0% | |
| ACATAGGGGACGTTGACCAT+AGG | + | chr1_4:55162695-55162714 | Msa0170790:intron | 50.0% | |
| ! | TCCGTCTTGTTGGGATCCTA+TGG | - | chr1_4:55162714-55162733 | None:intergenic | 50.0% |
| ATGGCCCGACTGCAGTTATT+TGG | - | chr1_4:55163417-55163436 | None:intergenic | 50.0% | |
| !! | TTTTGGAGGTAGCACCCGAA+TGG | - | chr1_4:55163995-55164014 | None:intergenic | 50.0% |
| ACAATGTACGTTCCCGTGCT+TGG | + | chr1_4:55164222-55164241 | Msa0170790:CDS | 50.0% | |
| CAATGTACGTTCCCGTGCTT+GGG | + | chr1_4:55164223-55164242 | Msa0170790:CDS | 50.0% | |
| AATGTACGTTCCCGTGCTTG+GGG | + | chr1_4:55164224-55164243 | Msa0170790:CDS | 50.0% | |
| ! | CGTGCTTGGGGTGCTAAAAT+TGG | + | chr1_4:55164236-55164255 | Msa0170790:CDS | 50.0% |
| GTCCTACACGTGTTGAAGCA+TGG | + | chr1_4:55164874-55164893 | Msa0170790:intron | 50.0% | |
| GATTCATTCGCCTGAGTTGC+TGG | - | chr1_4:55165782-55165801 | None:intergenic | 50.0% | |
| GCAACTCAGGCGAATGAATC+AGG | + | chr1_4:55165782-55165801 | Msa0170790:CDS | 50.0% | |
| CGCATCAATTTCTGTGGCAG+AGG | - | chr1_4:55165911-55165930 | None:intergenic | 50.0% | |
| CGACATGTTCAAGAGGCAGA+GGG | - | chr1_4:55165946-55165965 | None:intergenic | 50.0% | |
| TCGACATGTTCAAGAGGCAG+AGG | - | chr1_4:55165947-55165966 | None:intergenic | 50.0% | |
| TCTGCCTCTTGAACATGTCG+AGG | + | chr1_4:55165946-55165965 | Msa0170790:CDS | 50.0% | |
| TGTTGGAGGAGAACTTGGAC+TGG | + | chr1_4:55166064-55166083 | Msa0170790:CDS | 50.0% | |
| GTTGGAGGAGAACTTGGACT+GGG | + | chr1_4:55166065-55166084 | Msa0170790:CDS | 50.0% | |
| CACTTCTATTGGGGGAGTGA+TGG | + | chr1_4:55166225-55166244 | Msa0170790:three_prime_UTR | 50.0% | |
| TTCTATTGGGGGAGTGATGG+TGG | + | chr1_4:55166228-55166247 | Msa0170790:three_prime_UTR | 50.0% | |
| TCTATTGGGGGAGTGATGGT+GGG | + | chr1_4:55166229-55166248 | Msa0170790:three_prime_UTR | 50.0% | |
| AAACACCCGCATGAAGACGC+GGG | + | chr1_4:55159987-55160006 | Msa0170790:CDS | 55.0% | |
| TATGCACCCGCGTCTTCATG+CGG | - | chr1_4:55159996-55160015 | None:intergenic | 55.0% | |
| GATCTTCTCTCCGCATCACG+AGG | - | chr1_4:55160101-55160120 | None:intergenic | 55.0% | |
| CTCAGGACCAACAGGATGCT+CGG | - | chr1_4:55160174-55160193 | None:intergenic | 55.0% | |
| CTAGCGGCCTTCACTTGGAT+TGG | + | chr1_4:55160438-55160457 | Msa0170790:CDS | 55.0% | |
| GAACCCTGGCCTATGTTACG+TGG | + | chr1_4:55160521-55160540 | Msa0170790:CDS | 55.0% | |
| ! | GCAGAACCTAGGGAGTATGG+CGG | + | chr1_4:55160587-55160606 | Msa0170790:CDS | 55.0% |
| ! | CAGAACCTAGGGAGTATGGC+GGG | + | chr1_4:55160588-55160607 | Msa0170790:CDS | 55.0% |
| ! | AGAACCTAGGGAGTATGGCG+GGG | + | chr1_4:55160589-55160608 | Msa0170790:CDS | 55.0% |
| GGGAAGCTCGTGAAGCTGTT+GGG | + | chr1_4:55160609-55160628 | Msa0170790:CDS | 55.0% | |
| GGAAGCTCGTGAAGCTGTTG+GGG | + | chr1_4:55160610-55160629 | Msa0170790:CDS | 55.0% | |
| ! | GCGTAGTAGGGGCTTTGACA+AGG | + | chr1_4:55161138-55161157 | Msa0170790:CDS | 55.0% |
| ! | GATGGATGTGCTGATGGGCA+GGG | + | chr1_4:55161169-55161188 | Msa0170790:CDS | 55.0% |
| ! | ATGGATGTGCTGATGGGCAG+GGG | + | chr1_4:55161170-55161189 | Msa0170790:CDS | 55.0% |
| TGGGCAGGGGGCAATAGAAA+AGG | + | chr1_4:55161183-55161202 | Msa0170790:CDS | 55.0% | |
| CTGAAACGAGGCTCCCGATT+AGG | - | chr1_4:55161280-55161299 | None:intergenic | 55.0% | |
| CTAATCGGGAGCCTCGTTTC+AGG | + | chr1_4:55161278-55161297 | Msa0170790:CDS | 55.0% | |
| ACCCTTCGTTGTCTTGGGTG+CGG | - | chr1_4:55161306-55161325 | None:intergenic | 55.0% | |
| TTGCTGGCACTGTTTAGCGG+TGG | + | chr1_4:55161661-55161680 | Msa0170790:CDS | 55.0% | |
| GGCACTGTTTAGCGGTGGAA+TGG | + | chr1_4:55161666-55161685 | Msa0170790:CDS | 55.0% | |
| ACACATCAGTCCCCCAAAGC+TGG | - | chr1_4:55163792-55163811 | None:intergenic | 55.0% | |
| CAGGAGGTGGAGATGCTGTT+GGG | - | chr1_4:55163948-55163967 | None:intergenic | 55.0% | |
| TCTTGTATGGCTGCAGGAGG+TGG | - | chr1_4:55163961-55163980 | None:intergenic | 55.0% | |
| TGGAGCGGACAATGACTACC+AGG | + | chr1_4:55164454-55164473 | Msa0170790:CDS | 55.0% | |
| GGAGCGGACAATGACTACCA+GGG | + | chr1_4:55164455-55164474 | Msa0170790:CDS | 55.0% | |
| GCTGAAACAAACCGAGGCTG+CGG | - | chr1_4:55164481-55164500 | None:intergenic | 55.0% | |
| CTAGCCTAGCTAGAACGACC+CGG | + | chr1_4:55164908-55164927 | Msa0170790:intron | 55.0% | |
| ATTTGGAGACGCACACGACC+AGG | + | chr1_4:55165388-55165407 | Msa0170790:CDS | 55.0% | |
| CAAGGCTACACCAGCAACTC+AGG | + | chr1_4:55165769-55165788 | Msa0170790:CDS | 55.0% | |
| GCTTCTTGCAACGAGACCAC+CGG | - | chr1_4:55165889-55165908 | None:intergenic | 55.0% | |
| ATGCACCCGCGTCTTCATGC+GGG | - | chr1_4:55159995-55160014 | None:intergenic | 60.0% | |
| CCAACAGGATGCTCGGCATG+AGG | - | chr1_4:55160167-55160186 | None:intergenic | 60.0% | |
| CCTCATGCCGAGCATCCTGT+TGG | + | chr1_4:55160164-55160183 | Msa0170790:CDS | 60.0% | |
| TGCAGCTAGCGGCCTTCACT+TGG | + | chr1_4:55160433-55160452 | Msa0170790:CDS | 60.0% | |
| TGATCCTCCTGGCGCGAGTT+TGG | + | chr1_4:55160499-55160518 | Msa0170790:CDS | 60.0% | |
| GGGGAAGCTCGTGAAGCTGT+TGG | + | chr1_4:55160608-55160627 | Msa0170790:CDS | 60.0% | |
| !! | AGGAAGTGAAGCACCGGGAC+TGG | + | chr1_4:55160690-55160709 | Msa0170790:CDS | 60.0% |
| !! | GGAAGTGAAGCACCGGGACT+GGG | + | chr1_4:55160691-55160710 | Msa0170790:CDS | 60.0% |
| !! | GAAGTGAAGCACCGGGACTG+GGG | + | chr1_4:55160692-55160711 | Msa0170790:CDS | 60.0% |
| !! | AAGTGAAGCACCGGGACTGG+GGG | + | chr1_4:55160693-55160712 | Msa0170790:CDS | 60.0% |
| TTTCCTTCTCCCCCCAGTCC+CGG | - | chr1_4:55160706-55160725 | None:intergenic | 60.0% | |
| ! | CGATGGATGTGCTGATGGGC+AGG | + | chr1_4:55161168-55161187 | Msa0170790:CDS | 60.0% |
| ! | TGGATGTGCTGATGGGCAGG+GGG | + | chr1_4:55161171-55161190 | Msa0170790:CDS | 60.0% |
| GGAGCCCTCAGGTGCCTAAT+CGG | + | chr1_4:55161263-55161282 | Msa0170790:CDS | 60.0% | |
| GAGCCCTCAGGTGCCTAATC+GGG | + | chr1_4:55161264-55161283 | Msa0170790:CDS | 60.0% | |
| GCTCCCGATTAGGCACCTGA+GGG | - | chr1_4:55161270-55161289 | None:intergenic | 60.0% | |
| TCCCGCACCCAAGACAACGA+AGG | + | chr1_4:55161301-55161320 | Msa0170790:CDS | 60.0% | |
| CCCTTCGTTGTCTTGGGTGC+GGG | - | chr1_4:55161305-55161324 | None:intergenic | 60.0% | |
| CCCGCACCCAAGACAACGAA+GGG | + | chr1_4:55161302-55161321 | Msa0170790:CDS | 60.0% | |
| ACTGCAGTCGGGCCATCATC+TGG | + | chr1_4:55163421-55163440 | Msa0170790:intron | 60.0% | |
| AGGTCAGAGGTGGCCAGCTT+TGG | + | chr1_4:55163776-55163795 | Msa0170790:intron | 60.0% | |
| GGTCAGAGGTGGCCAGCTTT+GGG | + | chr1_4:55163777-55163796 | Msa0170790:intron | 60.0% | |
| GTCAGAGGTGGCCAGCTTTG+GGG | + | chr1_4:55163778-55163797 | Msa0170790:CDS | 60.0% | |
| ! | TCAGAGGTGGCCAGCTTTGG+GGG | + | chr1_4:55163779-55163798 | Msa0170790:CDS | 60.0% |
| GCAGGAGGTGGAGATGCTGT+TGG | - | chr1_4:55163949-55163968 | None:intergenic | 60.0% | |
| ACAGCCACGGGAGCAAGAGT+CGG | - | chr1_4:55164435-55164454 | None:intergenic | 60.0% | |
| ATTGTCCGCTCCACAGCCAC+GGG | - | chr1_4:55164447-55164466 | None:intergenic | 60.0% | |
| CATTGTCCGCTCCACAGCCA+CGG | - | chr1_4:55164448-55164467 | None:intergenic | 60.0% | |
| ! | AAGGCCGGGTCGTTCTAGCT+AGG | - | chr1_4:55164915-55164934 | None:intergenic | 60.0% |
| GGTTCCAAACTCGCGCCAGG+AGG | - | chr1_4:55160506-55160525 | None:intergenic | 65.0% | |
| CAGGGTTCCAAACTCGCGCC+AGG | - | chr1_4:55160509-55160528 | None:intergenic | 65.0% | |
| ! | CTGGCGCGAGTTTGGAACCC+TGG | + | chr1_4:55160507-55160526 | Msa0170790:CDS | 65.0% |
| GCTTCCCCGCCATACTCCCT+AGG | - | chr1_4:55160596-55160615 | None:intergenic | 65.0% | |
| !! | AGTGAAGCACCGGGACTGGG+GGG | + | chr1_4:55160694-55160713 | Msa0170790:CDS | 65.0% |
| AAGATCACGGGGGAGCCCTC+AGG | + | chr1_4:55161252-55161271 | Msa0170790:CDS | 65.0% | |
| GGCTCCCGATTAGGCACCTG+AGG | - | chr1_4:55161271-55161290 | None:intergenic | 65.0% | |
| TGGGTGCGGGACCTGAAACG+AGG | - | chr1_4:55161292-55161311 | None:intergenic | 65.0% | |
| ! | TGAGCCGACTCTTGCTCCCG+TGG | + | chr1_4:55164428-55164447 | Msa0170790:CDS | 65.0% |
| GACTCTTGCTCCCGTGGCTG+TGG | + | chr1_4:55164434-55164453 | Msa0170790:CDS | 65.0% | |
| TTGCTCCCGTGGCTGTGGAG+CGG | + | chr1_4:55164439-55164458 | Msa0170790:CDS | 65.0% | |
| GACTACCAGGGCCGCAGCCT+CGG | + | chr1_4:55164467-55164486 | Msa0170790:CDS | 70.0% | |
| ACAAACCGAGGCTGCGGCCC+TGG | - | chr1_4:55164475-55164494 | None:intergenic | 70.0% | |
| GCACCGGGACTGGGGGGAGA+AGG | + | chr1_4:55160700-55160719 | Msa0170790:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 55159936 | 55166381 | 55159936 | ID=Msa0170790;Name=Msa0170790 |
| chr1_4 | mRNA | 55159936 | 55166381 | 55159936 | ID=Msa0170790-mRNA-1;Parent=Msa0170790;Name=Msa0170790-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.88|0.8|1|0.88|0.9|10|208|890 |
| chr1_4 | exon | 55159936 | 55161346 | 55159936 | ID=Msa0170790-mRNA-1:exon:16462;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55161573 | 55161943 | 55161573 | ID=Msa0170790-mRNA-1:exon:16463;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55163778 | 55163838 | 55163778 | ID=Msa0170790-mRNA-1:exon:16464;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55163920 | 55164018 | 55163920 | ID=Msa0170790-mRNA-1:exon:16465;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55164201 | 55164295 | 55164201 | ID=Msa0170790-mRNA-1:exon:16466;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55164375 | 55164488 | 55164375 | ID=Msa0170790-mRNA-1:exon:16467;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55164974 | 55165041 | 55164974 | ID=Msa0170790-mRNA-1:exon:16468;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55165299 | 55165409 | 55165299 | ID=Msa0170790-mRNA-1:exon:16469;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55165736 | 55165967 | 55165736 | ID=Msa0170790-mRNA-1:exon:16470;Parent=Msa0170790-mRNA-1 |
| chr1_4 | exon | 55166063 | 55166381 | 55166063 | ID=Msa0170790-mRNA-1:exon:16471;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55159936 | 55161346 | 55159936 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55161573 | 55161943 | 55161573 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55163778 | 55163838 | 55163778 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55163920 | 55164018 | 55163920 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55164201 | 55164295 | 55164201 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55164375 | 55164488 | 55164375 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55164974 | 55165041 | 55164974 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55165299 | 55165409 | 55165299 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55165736 | 55165967 | 55165736 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | CDS | 55166063 | 55166173 | 55166063 | ID=Msa0170790-mRNA-1:cds;Parent=Msa0170790-mRNA-1 |
| chr1_4 | three_prime_UTR | 55166174 | 55166381 | 55166174 | ID=Msa0170790-mRNA-1:three_prime_utr;Parent=Msa0170790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
