AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1423390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1423390 MtrunA17_Chr8g0392301 91.743 109 9 0 5 113 875 983 2.14e-63 214
Msa1423390 MtrunA17_Chr8g0392301 75.188 133 12 2 132 243 116 248 2.39e-54 189
Msa1423390 MtrunA17_Chr8g0377481 63.889 108 32 1 5 112 855 955 6.90e-39 144
Msa1423390 MtrunA17_Chr8g0377481 45.638 149 44 3 132 243 111 259 3.33e-27 110
Msa1423390 MtrunA17_Chr3g0122391 62.037 108 33 1 5 112 913 1012 3.46e-36 136
Msa1423390 MtrunA17_Chr3g0122391 47.297 148 41 3 132 242 159 306 4.80e-28 113
Msa1423390 MtrunA17_Chr5g0447641 56.410 117 42 2 4 113 1087 1201 4.09e-34 130
Msa1423390 MtrunA17_Chr5g0447641 45.223 157 50 4 125 246 332 487 2.78e-29 116
Msa1423390 MtrunA17_Chr2g0311191 67.442 86 18 3 174 258 22 98 4.64e-26 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1423390 AT2G01830.5 65.909 132 23 3 132 241 193 324 3.06e-43 157
Msa1423390 AT2G01830.5 68.807 109 27 1 5 113 948 1049 2.13e-42 155
Msa1423390 AT2G01830.1 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1423390 AT2G01830.1 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1423390 AT2G01830.4 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1423390 AT2G01830.4 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1423390 AT2G01830.6 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1423390 AT2G01830.6 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1423390 AT2G01830.3 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1423390 AT2G01830.3 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1423390 AT2G01830.2 65.909 132 23 3 132 241 204 335 3.90e-43 157
Msa1423390 AT2G01830.2 68.807 109 27 1 5 113 959 1060 2.32e-42 155
Msa1423390 AT1G27320.1 63.248 117 38 2 1 112 900 1016 9.34e-42 153
Msa1423390 AT1G27320.1 43.624 149 47 3 132 243 169 317 3.43e-25 105
Msa1423390 AT5G35750.1 63.248 117 38 2 5 116 1049 1165 6.82e-41 150
Msa1423390 AT5G35750.1 48.000 150 43 3 132 246 308 457 2.08e-30 120

Find 370 sgRNAs with CRISPR-Local

Find 719 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTGCACCTTTCTCTTTC+TGG 0.090871 tig0025532:+51407 None:intergenic
CCTTGAGCTGTCTAGAAATT+TGG 0.120024 tig0025532:-54232 Msa1423390:five_prime_UTR
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 tig0025532:+48164 None:intergenic
CATTATTAAGTTTGTACTTT+TGG 0.162606 tig0025532:-53108 Msa1423390:five_prime_UTR
TAAATTCCGTTTACCTATAT+TGG 0.165693 tig0025532:-46753 Msa1423390:CDS
ACACTGCCAGTTATGAATTT+TGG 0.177356 tig0025532:+48944 None:intergenic
AGCTACTGGTAAAGCATTTC+TGG 0.184947 tig0025532:-49756 Msa1423390:five_prime_UTR
GCTGTGCTCGTTGGCTCTTT+TGG 0.262041 tig0025532:-44953 Msa1423390:three_prime_UTR
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 tig0025532:-47481 Msa1423390:five_prime_UTR
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0025532:+45750 None:intergenic
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0025532:+49728 None:intergenic
TTGAAGCAACTCGTCGAATT+CGG 0.272691 tig0025532:-46832 Msa1423390:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 tig0025532:-50362 Msa1423390:five_prime_UTR
AATAAATTTATCGGGCCTTT+TGG 0.277715 tig0025532:-45028 Msa1423390:three_prime_UTR
TCCAATCTGAAGCTCGAAAA+TGG 0.279042 tig0025532:-54969 Msa1423390:five_prime_UTR
AGCTCTTCTGTTGTTGGGTT+GGG 0.283441 tig0025532:+45678 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.284727 tig0025532:+49228 None:intergenic
AAGAATATTGTTCTTATAGA+AGG 0.285105 tig0025532:-52811 Msa1423390:five_prime_UTR
TCTGATTAAGATTAATGTTA+TGG 0.285743 tig0025532:-48916 Msa1423390:five_prime_UTR
CTAAGCGCGAGACTAATATT+TGG 0.289326 tig0025532:-44987 Msa1423390:three_prime_UTR
AGCTGGAGATATCAAGAAAT+TGG 0.296400 tig0025532:-51723 Msa1423390:five_prime_UTR
CAAAAGTACAAACTTAATAA+TGG 0.297310 tig0025532:+53109 None:intergenic
TGAATGCTTGGATATCTATT+AGG 0.305363 tig0025532:+52580 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 tig0025532:+48484 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 tig0025532:-46831 Msa1423390:CDS
AAGGCATGAAAATTCTATCT+TGG 0.329216 tig0025532:+48357 None:intergenic
CCATTATCTCTTTCCTATAC+AGG 0.329932 tig0025532:-51337 Msa1423390:five_prime_UTR
GTCAAAATAAATAAATTTAT+CGG 0.334602 tig0025532:-45037 Msa1423390:three_prime_UTR
GTAACAAAGCACATATAAAA+AGG 0.337845 tig0025532:-51453 Msa1423390:five_prime_UTR
CTGATTAAGATTAATGTTAT+GGG 0.339688 tig0025532:-48915 Msa1423390:five_prime_UTR
GAGTGCAGAAGTAATGTAAA+AGG 0.340817 tig0025532:-51639 Msa1423390:five_prime_UTR
GGCTTTAAACCCTCTAAAAC+TGG 0.340964 tig0025532:+48121 None:intergenic
GTGTTAGCTGGTGTTGTAAT+GGG 0.347004 tig0025532:-50577 Msa1423390:intron
GATTTCCAATGATCGGCATT+GGG 0.348809 tig0025532:+44693 None:intergenic
AGCTCTTATGTTGTTGGGTT+GGG 0.355867 tig0025532:+49656 None:intergenic
TAGAAAATAGAGGTTTATAG+AGG 0.356406 tig0025532:+52721 None:intergenic
ATCTAGACTCCGACACGTTC+CGG 0.356468 tig0025532:-45082 Msa1423390:three_prime_UTR
ATGTGCTAAACTCCGCATTC+TGG 0.359839 tig0025532:+45170 None:intergenic
CTCTGAATCTGAACAGTCTT+AGG 0.361731 tig0025532:+54324 None:intergenic
CAAGTTTGATGCTTGCTTCA+AGG 0.362213 tig0025532:-47264 Msa1423390:CDS
CTAACAACCCTCTTACTCAT+TGG 0.363261 tig0025532:-51300 Msa1423390:five_prime_UTR
TGGAAATCAAAATTTATTGA+TGG 0.364877 tig0025532:-44678 Msa1423390:three_prime_UTR
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0025532:+45702 None:intergenic
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0025532:+49680 None:intergenic
AAACATCACCTTCTTTGTAT+TGG 0.366658 tig0025532:+49210 None:intergenic
CCTCGTCGCAATGGCGGTTC+CGG 0.368561 tig0025532:-51552 Msa1423390:five_prime_UTR
TATCCGTGTATCAGTCTATA+TGG 0.368758 tig0025532:-54168 Msa1423390:five_prime_UTR
TAATGAGCTCTTATGTTGTT+GGG 0.369742 tig0025532:+49651 None:intergenic
TTAATGAGCTCTTCTGTTGT+TGG 0.370178 tig0025532:+45672 None:intergenic
CTTAGGCCACTTGTCGAATC+TGG 0.370934 tig0025532:+54341 None:intergenic
TCTAATCCTATTTGATCTCC+TGG 0.371886 tig0025532:+52540 None:intergenic
AATTTACTTGGTCAACTTGC+TGG 0.372381 tig0025532:-49285 Msa1423390:five_prime_UTR
AACTTTCAGGTTGGGTCTGC+CGG 0.373589 tig0025532:+45063 None:intergenic
TTTAAAGCCGTTGTGGTTGA+TGG 0.373929 tig0025532:-48107 Msa1423390:five_prime_UTR
TTGACTCCAACTTTCAGGTT+GGG 0.377248 tig0025532:+45055 None:intergenic
AGTCGCAAACGCCATCAATA+AGG 0.379169 tig0025532:-48024 Msa1423390:five_prime_UTR
TTATTGCATCTACAGCAAAA+TGG 0.379494 tig0025532:-50398 Msa1423390:five_prime_UTR
GATCTTCAGTGTGCGGCAAC+TGG 0.379917 tig0025532:-47644 Msa1423390:five_prime_UTR
GAAACAATGTTTACCTGTAT+AGG 0.381243 tig0025532:+51324 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.382581 tig0025532:+45673 None:intergenic
GCATGACGACTTGGATTTCA+TGG 0.383364 tig0025532:-45114 Msa1423390:three_prime_UTR
TTAATGAGCTCTTATGTTGT+TGG 0.383934 tig0025532:+49650 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.384098 tig0025532:+49229 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 tig0025532:+48080 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 tig0025532:+48632 None:intergenic
ATTTAATGGACCACACACTA+TGG 0.386966 tig0025532:-52950 Msa1423390:five_prime_UTR
TTTCACTTCGCAAATTTCAT+TGG 0.387078 tig0025532:-54890 Msa1423390:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0025532:-45991 Msa1423390:CDS
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0025532:-49974 Msa1423390:five_prime_UTR
AACTTGTTGATGCTTCAATA+TGG 0.391748 tig0025532:+52640 None:intergenic
GAAAACCCAGGAGATCAAAT+AGG 0.395401 tig0025532:-52546 Msa1423390:five_prime_UTR
GCTACAAATTCAATTAATAA+AGG 0.396305 tig0025532:+52760 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 tig0025532:+46740 None:intergenic
GAGTCTGAAAGGAGATTAAA+CGG 0.402628 tig0025532:+55048 None:intergenic
TTATGAACAAGTCACCTAGA+TGG 0.407870 tig0025532:-48421 Msa1423390:five_prime_UTR
CTTCTGTTGTTGGGTTGGGA+GGG 0.408038 tig0025532:+45682 None:intergenic
TGAACAATTCCTTCCTCAAA+AGG 0.408776 tig0025532:+46656 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 tig0025532:-50342 Msa1423390:five_prime_UTR
TAAGTGCCTAGCTGAACTAA+TGG 0.413074 tig0025532:-48270 Msa1423390:five_prime_UTR
AACTCGACTTCTAGAAACTA+TGG 0.415251 tig0025532:-48320 Msa1423390:five_prime_UTR
TGTGTCGAAGACACTGGAAT+TGG 0.420012 tig0025532:-48395 Msa1423390:five_prime_UTR
CACAGAACCCAATGAGTAAG+AGG 0.421143 tig0025532:+51292 None:intergenic
GTTGCTTTGTATTCTTCTGA+TGG 0.422242 tig0025532:-50431 Msa1423390:five_prime_UTR
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 tig0025532:+48631 None:intergenic
ACCGAGCCAAAATTCATAAC+TGG 0.425503 tig0025532:-48950 Msa1423390:five_prime_UTR
AACTATGGTGGTACCGGCAT+TGG 0.427397 tig0025532:-48305 Msa1423390:five_prime_UTR
TAACAACCCTCTTACTCATT+GGG 0.429622 tig0025532:-51299 Msa1423390:five_prime_UTR
TGAAATTTGCGAAGTGAAAA+CGG 0.429932 tig0025532:+54894 None:intergenic
CCAATCGGATATTGAATGCT+TGG 0.430148 tig0025532:+52568 None:intergenic
AAAACCCCAATGCCGATCAT+TGG 0.430396 tig0025532:-44698 Msa1423390:three_prime_UTR
CCTGTATAGGAAAGAGATAA+TGG 0.430433 tig0025532:+51337 None:intergenic
CTGAAGGTGGTGGAGGGGAA+AGG 0.432104 tig0025532:-52105 Msa1423390:intron
ACCGGAGCTGAAGGTGGTGG+AGG 0.432907 tig0025532:-52112 Msa1423390:intron
TTTATAAGCCGGCCACAGAT+TGG 0.433400 tig0025532:-48233 Msa1423390:five_prime_UTR
AGGCATGAAAATTCTATCTT+GGG 0.434654 tig0025532:+48358 None:intergenic
GAGCTCTTCTGTTGTTGGGT+TGG 0.436168 tig0025532:+45677 None:intergenic
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0025532:-45990 Msa1423390:CDS
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0025532:-49973 Msa1423390:five_prime_UTR
GGCTTCTACGGGTAATGTTG+TGG 0.441520 tig0025532:-45138 Msa1423390:exon
AGTGTTAGCTGGTGTTGTAA+TGG 0.441960 tig0025532:-50578 Msa1423390:intron
TTAATTGGAGGTAGTTATGT+TGG 0.442968 tig0025532:-49339 Msa1423390:intron
TTTCAACATTTAGCATGTAC+TGG 0.443851 tig0025532:-54056 Msa1423390:five_prime_UTR
TATCAGTCTATATGGTTTGT+AGG 0.444423 tig0025532:-54160 Msa1423390:five_prime_UTR
AGCGGTCCTAGCCGTATATT+CGG 0.445484 tig0025532:+50097 None:intergenic
GTTGGTGGCGATGGCGGTTG+CGG 0.446160 tig0025532:-52013 Msa1423390:five_prime_UTR
AATAGAAAGCCCGCAACAAA+TGG 0.447886 tig0025532:-48641 Msa1423390:five_prime_UTR
GCTTCTACGGGTAATGTTGT+GGG 0.449565 tig0025532:-45137 Msa1423390:exon
TCCCTTGTGGAAAATTTACT+TGG 0.449628 tig0025532:-49297 Msa1423390:five_prime_UTR
TCTTCTGTTGTTGGGTTGGG+AGG 0.450263 tig0025532:+45681 None:intergenic
GCCACCACCACCTTCAGCTC+CGG 0.450368 tig0025532:+52465 None:intergenic
TGATTTCCAATGATCGGCAT+TGG 0.452162 tig0025532:+44692 None:intergenic
CAAAGAAACAGCCTTATTGA+TGG 0.453163 tig0025532:+48013 None:intergenic
TAAGCGCGAGACTAATATTT+GGG 0.454578 tig0025532:-44986 Msa1423390:three_prime_UTR
GAAGAAGTTGTGCATACATC+TGG 0.454754 tig0025532:-48587 Msa1423390:five_prime_UTR
GGATATTCAAATGCAAGAAA+AGG 0.455195 tig0025532:-47243 Msa1423390:CDS
CATACGGGGACTGGCTTCTA+CGG 0.455310 tig0025532:-45150 Msa1423390:CDS
ACTTGAACCTTCAGCTGAAA+AGG 0.457162 tig0025532:+52666 None:intergenic
AGATGTATGCACAACTTCTT+CGG 0.457816 tig0025532:+48589 None:intergenic
TCAAAATAAATAAATTTATC+GGG 0.458085 tig0025532:-45036 Msa1423390:three_prime_UTR
TTCAAAGTTCCAAGAACAAA+CGG 0.459844 tig0025532:-50509 Msa1423390:five_prime_UTR
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 tig0025532:-50341 Msa1423390:five_prime_UTR
TCCAATAACTGAGGTGAAGA+AGG 0.463469 tig0025532:-48165 Msa1423390:five_prime_UTR
TCAAAGTTCCAAGAACAAAC+GGG 0.463568 tig0025532:-50508 Msa1423390:five_prime_UTR
AATAAGGCTGTTTCTTTGTG+TGG 0.465190 tig0025532:-48008 Msa1423390:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0025532:-46164 Msa1423390:CDS
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0025532:-50533 Msa1423390:five_prime_UTR
TCTTATGTTGTTGGGTTGGG+AGG 0.468813 tig0025532:+49659 None:intergenic
GTGACGGCCACACCTGATAT+AGG 0.469948 tig0025532:-51612 Msa1423390:five_prime_UTR
CTTATGTTGTTGGGTTGGGA+GGG 0.470141 tig0025532:+49660 None:intergenic
ATGGATGAAGTTGGTGGCGA+TGG 0.473168 tig0025532:-52022 Msa1423390:five_prime_UTR
GTCAAATAAACTTTATAAGC+CGG 0.473292 tig0025532:-48244 Msa1423390:five_prime_UTR
CTTGGAACTTTGAAGCCAAA+GGG 0.475089 tig0025532:+50518 None:intergenic
TTTGACTCCAACTTTCAGGT+TGG 0.476261 tig0025532:+45054 None:intergenic
CAGAAGTAATGTAAAAGGTA+AGG 0.479588 tig0025532:-51634 Msa1423390:five_prime_UTR
GAGCTCTTATGTTGTTGGGT+TGG 0.479818 tig0025532:+49655 None:intergenic
AACATACTGAGAGCTCCTAC+TGG 0.482031 tig0025532:-45792 Msa1423390:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 tig0025532:-48059 Msa1423390:five_prime_UTR
ACTGATCCCCTAATCATGTA+TGG 0.483235 tig0025532:-49236 Msa1423390:five_prime_UTR
AGGACCGATGGAGTTGTAGA+TGG 0.484578 tig0025532:-52082 Msa1423390:five_prime_UTR
ACTATTGCTGCTGTGCTCGT+TGG 0.485368 tig0025532:-44962 Msa1423390:three_prime_UTR
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 tig0025532:-47666 Msa1423390:five_prime_UTR
AGACGAACAAACTACCAATC+TGG 0.488070 tig0025532:-51383 Msa1423390:five_prime_UTR
TCTTCGACACAGACCCATCT+AGG 0.488222 tig0025532:+48407 None:intergenic
AAAATCCGCGGTAAATGAAA+AGG 0.489053 tig0025532:+48205 None:intergenic
CGAGTTAACTCTTTGTGCAT+AGG 0.489096 tig0025532:+50046 None:intergenic
TATGAACAAGTCACCTAGAT+GGG 0.489195 tig0025532:-48420 Msa1423390:five_prime_UTR
ATAAGGCTGTTTCTTTGTGT+GGG 0.489234 tig0025532:-48007 Msa1423390:five_prime_UTR
GAGTTATCTGCCTTCACAAA+AGG 0.489687 tig0025532:+48338 None:intergenic
TTGTAGATGGTGGTGGCGAA+AGG 0.493499 tig0025532:-52069 Msa1423390:five_prime_UTR
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0025532:+45751 None:intergenic
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0025532:+49729 None:intergenic
CCGGAGCTGAAGGTGGTGGA+GGG 0.497991 tig0025532:-52111 Msa1423390:intron
GTTGAAGTTGGCGGTGGCAC+CGG 0.498250 tig0025532:-52484 Msa1423390:five_prime_UTR
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 tig0025532:+48054 None:intergenic
AAGTGCCTAGCTGAACTAAT+GGG 0.499182 tig0025532:-48269 Msa1423390:five_prime_UTR
TCATGGCCAATATAGGTAAA+CGG 0.499301 tig0025532:+46747 None:intergenic
TCTGAAAATATCACGCCAAA+AGG 0.500549 tig0025532:+45013 None:intergenic
CATCTAAAATGAGTTAAAGA+TGG 0.501537 tig0025532:+44759 None:intergenic
TTCAGATTCAGAGGAAGAAG+AGG 0.501652 tig0025532:-54314 Msa1423390:five_prime_UTR
TCTTGTAACTTTGAAGCCAA+AGG 0.501836 tig0025532:+46148 None:intergenic
GAGTTCGATGCGATGGCGAA+AGG 0.502422 tig0025532:-52519 Msa1423390:five_prime_UTR
TAAGAATATCTAGAAAATAG+AGG 0.503004 tig0025532:+52711 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 tig0025532:-48617 Msa1423390:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0025532:-45996 Msa1423390:CDS
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0025532:-49979 Msa1423390:five_prime_UTR
GGCGGTGGCACCGGAGCTGA+AGG 0.503621 tig0025532:-52475 Msa1423390:intron
CTTGTAACTTTGAAGCCAAA+GGG 0.504290 tig0025532:+46149 None:intergenic
TACTAAAGTGAGAAGGAAAG+AGG 0.504630 tig0025532:-50368 Msa1423390:five_prime_UTR
CTAATCCTATTTGATCTCCT+GGG 0.505911 tig0025532:+52541 None:intergenic
TTAAAGCCGTTGTGGTTGAT+GGG 0.511535 tig0025532:-48106 Msa1423390:five_prime_UTR
GGCAGACCCAACCTGAAAGT+TGG 0.512293 tig0025532:-45061 Msa1423390:three_prime_UTR
ATTGGAGGTAGTTATGTTGG+AGG 0.513150 tig0025532:-49336 Msa1423390:intron
TGAGCTATCTTGATGGATGT+AGG 0.513496 tig0025532:-53221 Msa1423390:five_prime_UTR
GATGGCGGTTGCGGTGGTGT+TGG 0.513633 tig0025532:-52004 Msa1423390:five_prime_UTR
AATGCGGAGTTTAGCACATA+CGG 0.514945 tig0025532:-45166 Msa1423390:CDS
TGCACCTGTCACATTTGCTC+AGG 0.517781 tig0025532:-49943 Msa1423390:five_prime_UTR
AGTTTAGCACATACGGGGAC+TGG 0.518029 tig0025532:-45159 Msa1423390:CDS
TTAACATGGTTTAATCATTG+AGG 0.522179 tig0025532:+53324 None:intergenic
TCATGGGTTTGTGGAGAGGA+CGG 0.522273 tig0025532:-47667 Msa1423390:five_prime_UTR
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 tig0025532:-46700 Msa1423390:CDS
AACACTCTTCATATGTAGCA+TGG 0.525664 tig0025532:+46711 None:intergenic
GAAGCCACTGAGAACTAGTA+TGG 0.525821 tig0025532:-47508 Msa1423390:five_prime_UTR
GGAGGGGAAAGGAGGACCGA+TGG 0.526035 tig0025532:-52094 Msa1423390:five_prime_UTR
ATAATGATAGCTAGAGCTAC+TGG 0.526297 tig0025532:-49770 Msa1423390:five_prime_UTR
TTTAAAGACAATGGAAAGAG+AGG 0.526312 tig0025532:-49988 Msa1423390:five_prime_UTR
TTCAAATGCAAGAAAAGGAC+GGG 0.526629 tig0025532:-47238 Msa1423390:intron
GGAGATGTACATGGTGGTTG+TGG 0.527779 tig0025532:-51977 Msa1423390:five_prime_UTR
GATGGAGAGGACGGCGAATG+AGG 0.528403 tig0025532:-46807 Msa1423390:CDS
GAGCTATCTTGATGGATGTA+GGG 0.529146 tig0025532:-53220 Msa1423390:five_prime_UTR
CAAATTGTAACAAATCTAGT+TGG 0.529505 tig0025532:-48883 Msa1423390:five_prime_UTR
ATGGATTACATCTGCTGTCA+TGG 0.530208 tig0025532:+46730 None:intergenic
CTATTGATATGATGTCTTGA+GGG 0.530839 tig0025532:-49899 Msa1423390:intron
AATCTAGTCCAGAAAGAGAA+AGG 0.531970 tig0025532:-51415 Msa1423390:five_prime_UTR
CCAAATTTCTAGACAGCTCA+AGG 0.532517 tig0025532:+54232 None:intergenic
CAAACTGAAGTTGAACCATC+AGG 0.532569 tig0025532:+47423 None:intergenic
AACAGGCAAGAAGAGACAGC+CGG 0.534721 tig0025532:-47457 Msa1423390:five_prime_UTR
CATCTACAGCAAAATGGATG+TGG 0.534726 tig0025532:-50392 Msa1423390:five_prime_UTR
TCAAGCACAAACCTGGTCAA+TGG 0.535029 tig0025532:+50242 None:intergenic
AAACCCTTCTGCCATTGACC+AGG 0.535215 tig0025532:-50253 Msa1423390:intron
GTTTCCTGAGCAAATGTGAC+AGG 0.535330 tig0025532:+49939 None:intergenic
TCATTCAAGCACATAGAGCC+CGG 0.535674 tig0025532:-50468 Msa1423390:five_prime_UTR
AGTCTGAGCATAGCCACGTT+GGG 0.538627 tig0025532:+49022 None:intergenic
AACTCGTCGAATTCGGGAGA+TGG 0.539466 tig0025532:-46825 Msa1423390:CDS
TGTAATCTCAAAACGCTAAG+TGG 0.539973 tig0025532:-48560 Msa1423390:five_prime_UTR
TCTTGGAACTTTGAAGCCAA+AGG 0.542220 tig0025532:+50517 None:intergenic
GGTTGCGGTGGTGTTGGCGA+TGG 0.542582 tig0025532:-51998 Msa1423390:five_prime_UTR
TGTTGTGGGGCATGACGACT+TGG 0.542613 tig0025532:-45123 Msa1423390:three_prime_UTR
TAGCTATCATTATGTTCTCT+CGG 0.543918 tig0025532:+49780 None:intergenic
TGTTTGAAATGTGGGATGGA+TGG 0.544805 tig0025532:-46692 Msa1423390:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 tig0025532:+47475 None:intergenic
CGAGGACATCACGGATTTAG+CGG 0.548208 tig0025532:+51570 None:intergenic
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0025532:-45741 Msa1423390:CDS
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0025532:-49719 Msa1423390:five_prime_UTR
CGAGCTTCAGATTGGAAGAG+CGG 0.549147 tig0025532:+54976 None:intergenic
AGAAAATAGAGGTTTATAGA+GGG 0.552867 tig0025532:+52722 None:intergenic
ATCAGGGCAATGGATGAAGT+TGG 0.554409 tig0025532:-52031 Msa1423390:five_prime_UTR
GGAAGCTATTCGAGAAGAAG+AGG 0.554823 tig0025532:-54371 Msa1423390:intron
GTTAACAACTCTTTGTGCAT+AGG 0.556014 tig0025532:+46066 None:intergenic
GAGAAAGATTCATGGGTTTG+TGG 0.557247 tig0025532:-47676 Msa1423390:five_prime_UTR
GAGCTCATTAAAGCGACCAC+AGG 0.557353 tig0025532:-49638 Msa1423390:five_prime_UTR
CTATGCACAAAGAGTTAACT+CGG 0.558471 tig0025532:-50045 Msa1423390:five_prime_UTR
AGGTACTTCCAATCTGTGGC+CGG 0.558714 tig0025532:+48225 None:intergenic
TGTTGGAGGATCCTTTGATG+TGG 0.558720 tig0025532:-49322 Msa1423390:five_prime_UTR
CAGAGAAGAGAGCTAAAGAT+CGG 0.559209 tig0025532:+54925 None:intergenic
AGATTCATGGGTTTGTGGAG+AGG 0.561266 tig0025532:-47671 Msa1423390:five_prime_UTR
TATGGCAACCAATACAAAGA+AGG 0.561778 tig0025532:-49218 Msa1423390:intron
CCAAGCATTCAATATCCGAT+TGG 0.562018 tig0025532:-52568 Msa1423390:five_prime_UTR
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0025532:+46085 None:intergenic
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0025532:+50065 None:intergenic
GATACCATTTGAAGAGACTT+GGG 0.564437 tig0025532:-48058 Msa1423390:five_prime_UTR
ATACGGGGACTGGCTTCTAC+GGG 0.565321 tig0025532:-45149 Msa1423390:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 tig0025532:+48292 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 tig0025532:-46701 Msa1423390:CDS
CGGAGCTGAAGGTGGTGGAG+GGG 0.566193 tig0025532:-52110 Msa1423390:intron
TCTAGAAACTATGGTGGTAC+CGG 0.567665 tig0025532:-48311 Msa1423390:five_prime_UTR
AGTCTGAAAGGAGATTAAAC+GGG 0.569635 tig0025532:+55049 None:intergenic
ATGACGGATGGTGTTGAAGT+TGG 0.569733 tig0025532:-52496 Msa1423390:five_prime_UTR
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0025532:+46079 None:intergenic
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0025532:+50059 None:intergenic
ATGGTGGTGGCGAAAGGAGA+AGG 0.570011 tig0025532:-52063 Msa1423390:five_prime_UTR
ACGGATGGTGTTGAAGTTGG+CGG 0.570486 tig0025532:-52493 Msa1423390:five_prime_UTR
TACTAATATTCGTAGCAAGA+AGG 0.570683 tig0025532:+47583 None:intergenic
ACAGGCAAGAAGAGACAGCC+GGG 0.572058 tig0025532:-47456 Msa1423390:five_prime_UTR
CTTTGATGTGGAGTCCCTTG+TGG 0.572959 tig0025532:-49310 Msa1423390:five_prime_UTR
CACAAGGGACTCCACATCAA+AGG 0.573882 tig0025532:+49311 None:intergenic
CCGTGATGTCCTCGTCGCAA+TGG 0.574492 tig0025532:-51561 Msa1423390:five_prime_UTR
GGTGGCGATGGCGGTTGCGG+TGG 0.575133 tig0025532:-52010 Msa1423390:five_prime_UTR
AGGATTAGAGTTCGATGCGA+TGG 0.575134 tig0025532:-52526 Msa1423390:five_prime_UTR
TATAAAGACAATGGAAAGAG+AGG 0.575171 tig0025532:-46005 Msa1423390:CDS
TAGAGGGTTTAAAGCCGTTG+TGG 0.575392 tig0025532:-48114 Msa1423390:five_prime_UTR
ATGCGGAGTTTAGCACATAC+GGG 0.576002 tig0025532:-45165 Msa1423390:CDS
GCAGAAGGGTTTCTGTAGGA+TGG 0.576930 tig0025532:+50264 None:intergenic
GACTGCTCAAGCGTGTGGGA+AGG 0.578235 tig0025532:-49003 Msa1423390:five_prime_UTR
CTCAGACTGCTCAAGCGTGT+GGG 0.579543 tig0025532:-49007 Msa1423390:five_prime_UTR
CTAAGACTGTTCAGATTCAG+AGG 0.581573 tig0025532:-54323 Msa1423390:five_prime_UTR
TAGAGTGGTTATAAAGACAA+TGG 0.582498 tig0025532:-46014 Msa1423390:CDS
TATTGTTCTTATAGAAGGTG+AGG 0.583167 tig0025532:-52806 Msa1423390:five_prime_UTR
CAAACCTGGTCAATGGCAGA+AGG 0.584600 tig0025532:+50249 None:intergenic
AAGGTGGTGGAGGGGAAAGG+AGG 0.586200 tig0025532:-52102 Msa1423390:five_prime_UTR
CGAATGGTGAATGTAGTGAA+AGG 0.586436 tig0025532:-46781 Msa1423390:CDS
ATAACTGAAACTAAATCGAT+CGG 0.586558 tig0025532:+51520 None:intergenic
TTGGGTCTGCCGGAACGTGT+CGG 0.588603 tig0025532:+45073 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.588844 tig0025532:-46108 Msa1423390:CDS
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0025532:+46099 None:intergenic
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0025532:+50079 None:intergenic
TGGGTCTGTGTCGAAGACAC+TGG 0.590108 tig0025532:-48401 Msa1423390:five_prime_UTR
CCACTGAGAACTAGTATGGT+GGG 0.590558 tig0025532:-47504 Msa1423390:five_prime_UTR
CAATGGAGAAAGAGTCTGAA+AGG 0.590894 tig0025532:+55037 None:intergenic
GCTCAGACTGCTCAAGCGTG+TGG 0.592158 tig0025532:-49008 Msa1423390:five_prime_UTR
AGCAAGCATCAAACTTGTGA+GGG 0.592861 tig0025532:+47270 None:intergenic
AATCGATCGGAGAGTTCTAC+CGG 0.594959 tig0025532:+51533 None:intergenic
GTTTGAGAAGCAGCATAGAG+TGG 0.595646 tig0025532:-50012 Msa1423390:five_prime_UTR
ATGCGATGGCGAAAGGATGA+CGG 0.597203 tig0025532:-52512 Msa1423390:five_prime_UTR
ATTCAAATGCAAGAAAAGGA+CGG 0.597672 tig0025532:-47239 Msa1423390:CDS
GAACACAGTTGAAACCAGAT+TGG 0.599444 tig0025532:+51369 None:intergenic
ACACTATGGCATGATAGAGT+TGG 0.601658 tig0025532:-52936 Msa1423390:five_prime_UTR
GCTGTCTAGAAATTTGGATG+TGG 0.601699 tig0025532:-54226 Msa1423390:five_prime_UTR
GTCGAATTCGGGAGATGGAG+AGG 0.601823 tig0025532:-46820 Msa1423390:CDS
CTTGAGACTTATCGAAATGG+AGG 0.602255 tig0025532:-48614 Msa1423390:five_prime_UTR
GTTTGAGAAGCAGCATAGAG+TGG 0.605018 tig0025532:-46029 Msa1423390:CDS
ATCTTGATGGATGTAGGGAA+AGG 0.606230 tig0025532:-53215 Msa1423390:five_prime_UTR
CTCTATCATGCCATAGTGTG+TGG 0.606806 tig0025532:+52940 None:intergenic
GCCACTGAGAACTAGTATGG+TGG 0.607785 tig0025532:-47505 Msa1423390:five_prime_UTR
GATTTAGCGGAGGCTTTGTG+CGG 0.608415 tig0025532:+51583 None:intergenic
ATTTGACCAGATTCGACAAG+TGG 0.608851 tig0025532:-54347 Msa1423390:five_prime_UTR
TTAAACCCTCTAAAACTGGA+TGG 0.609462 tig0025532:+48125 None:intergenic
TGTAAATATTCCAAAATCCG+CGG 0.609721 tig0025532:+48193 None:intergenic
CCGGGAAAAGAGATGCCTGA+TGG 0.609734 tig0025532:-47438 Msa1423390:five_prime_UTR
ACCACCATCTACAACTCCAT+CGG 0.611181 tig0025532:+52078 None:intergenic
AGGGCAATGGATGAAGTTGG+TGG 0.612947 tig0025532:-52028 Msa1423390:five_prime_UTR
AAGCAAGCATCAAACTTGTG+AGG 0.613257 tig0025532:+47269 None:intergenic
CAGTCTGAGCATAGCCACGT+TGG 0.613747 tig0025532:+49021 None:intergenic
TTTATAGAGGGAATCACGCG+TGG 0.614222 tig0025532:+52734 None:intergenic
TAGAGTTGGTGTGTGAATGT+AGG 0.614643 tig0025532:-52922 Msa1423390:five_prime_UTR
ATATAGACTGATACACGGAT+AGG 0.615163 tig0025532:+54170 None:intergenic
GATGGAGTTGTAGATGGTGG+TGG 0.615734 tig0025532:-52076 Msa1423390:five_prime_UTR
GTAGCAAGAAGGATCATTCG+AGG 0.616557 tig0025532:+47594 None:intergenic
TGATGTCCTCGTCGCAATGG+CGG 0.616829 tig0025532:-51558 Msa1423390:five_prime_UTR
CACTGTATCACTAAAACATG+CGG 0.616849 tig0025532:+47536 None:intergenic
CTTCTACGGGTAATGTTGTG+GGG 0.617417 tig0025532:-45136 Msa1423390:exon
ACATACTGAGAGCTCCTACT+GGG 0.618378 tig0025532:-45791 Msa1423390:CDS
TCTATTGATATGATGTCTTG+AGG 0.618511 tig0025532:-49900 Msa1423390:five_prime_UTR
CATGGTTTGATCAGTCTGCA+AGG 0.618845 tig0025532:+53286 None:intergenic
AGCTCATTAAAGCGACCACA+GGG 0.619676 tig0025532:-49637 Msa1423390:intron
ATGTCAATGGAAGTGACTGC+AGG 0.620608 tig0025532:-47365 Msa1423390:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0025532:-46094 Msa1423390:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0025532:-50074 Msa1423390:five_prime_UTR
ATTTCCAATGATCGGCATTG+GGG 0.621764 tig0025532:+44694 None:intergenic
GATGGTGTTGAAGTTGGCGG+TGG 0.623232 tig0025532:-52490 Msa1423390:five_prime_UTR
TGGTTGCCATACATGATTAG+GGG 0.623830 tig0025532:+49230 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 tig0025532:-46696 Msa1423390:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 tig0025532:-46062 Msa1423390:CDS
ATGTGGATACTAAAGTGAGA+AGG 0.624715 tig0025532:-50375 Msa1423390:five_prime_UTR
GAAGCTATTCGAGAAGAAGA+GGG 0.626506 tig0025532:-54370 Msa1423390:intron
AATGGCAGAAGGGTTTCTGT+AGG 0.630365 tig0025532:+50260 None:intergenic
ACTCTTCATCAGCAATTAGG+TGG 0.632287 tig0025532:+48487 None:intergenic
AATATCCGATTGGAAAACCC+AGG 0.633825 tig0025532:-52558 Msa1423390:five_prime_UTR
ATGGCAATTGAAGCTCGTTG+AGG 0.635193 tig0025532:-54950 Msa1423390:five_prime_UTR
GGTTAGGGATGAGTATGCAC+CGG 0.635635 tig0025532:-45975 Msa1423390:intron
GATGAAGTTGGTGGCGATGG+CGG 0.635723 tig0025532:-52019 Msa1423390:five_prime_UTR
AAACCTGGTCAATGGCAGAA+GGG 0.635904 tig0025532:+50250 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 tig0025532:-50088 Msa1423390:five_prime_UTR
TAATGTAAAAGGTAAGGTGA+CGG 0.636801 tig0025532:-51628 Msa1423390:five_prime_UTR
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0025532:-46089 Msa1423390:CDS
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0025532:-50069 Msa1423390:five_prime_UTR
CAAAATGATGAAGAATAGCA+AGG 0.637826 tig0025532:+44829 None:intergenic
AATTCGGGAGATGGAGAGGA+CGG 0.638289 tig0025532:-46816 Msa1423390:CDS
GCTTGGATATCTATTAGGCA+TGG 0.639413 tig0025532:+52585 None:intergenic
GGAACTTTGAAGCCAAAGGG+TGG 0.640019 tig0025532:+50521 None:intergenic
GAGTTAACTCGGAAAGAAAG+CGG 0.640585 tig0025532:-50034 Msa1423390:five_prime_UTR
TTGTTAACTCGGAAAGAGAG+CGG 0.640754 tig0025532:-46051 Msa1423390:CDS
AACAACCTAAAAGGGCTAGT+CGG 0.642277 tig0025532:+45759 None:intergenic
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0025532:-45736 Msa1423390:CDS
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0025532:-49714 Msa1423390:five_prime_UTR
AAAATGGTGCTTCCAGCACA+GGG 0.643044 tig0025532:-47983 Msa1423390:intron
GACCGCCCATTAGTTCAGCT+AGG 0.643366 tig0025532:+48264 None:intergenic
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 tig0025532:+46152 None:intergenic
GAAGTTGTGCATACATCTGG+CGG 0.651844 tig0025532:-48584 Msa1423390:five_prime_UTR
AGTCAATAACACAATTAACA+TGG 0.652172 tig0025532:+53268 None:intergenic
CCATTGCGACGAGGACATCA+CGG 0.652805 tig0025532:+51561 None:intergenic
TGCGGCAACTGGAAACAGAA+CGG 0.653414 tig0025532:-47633 Msa1423390:five_prime_UTR
ACGGCGAATGAGGAGACGAA+TGG 0.653590 tig0025532:-46797 Msa1423390:CDS
GCGAGATATTAGAAAAGCTG+AGG 0.654014 tig0025532:-51955 Msa1423390:five_prime_UTR
ATAATGCAGTTCAATAAGCG+AGG 0.657195 tig0025532:-48695 Msa1423390:intron
ACATCATATCAATAGACTCA+AGG 0.658508 tig0025532:+49907 None:intergenic
GTCGGAACAAACTTCCCAGT+AGG 0.660421 tig0025532:+45777 None:intergenic
TACAAAGAATCCAATAACTG+AGG 0.662560 tig0025532:-48174 Msa1423390:five_prime_UTR
AGGACGGGATCTTCAGTGTG+CGG 0.664290 tig0025532:-47651 Msa1423390:five_prime_UTR
GAAAAGGTACTTCCAATCTG+TGG 0.664912 tig0025532:+48221 None:intergenic
CCGGAACCGCCATTGCGACG+AGG 0.668033 tig0025532:+51552 None:intergenic
GTTGGCGATGGAGATGTACA+TGG 0.668187 tig0025532:-51986 Msa1423390:five_prime_UTR
GATGTGAAGTGTGCAGACAG+CGG 0.669637 tig0025532:-47320 Msa1423390:CDS
ACAGAACCCAATGAGTAAGA+GGG 0.670609 tig0025532:+51293 None:intergenic
TCAGTTTGAAGCCTTCTGTG+CGG 0.678971 tig0025532:-47408 Msa1423390:five_prime_UTR
TCGACTTCTAGAAACTATGG+TGG 0.680954 tig0025532:-48317 Msa1423390:five_prime_UTR
GGACATCACGGATTTAGCGG+AGG 0.683899 tig0025532:+51573 None:intergenic
CAAAGTTCCAAGAACAAACG+GGG 0.685277 tig0025532:-50507 Msa1423390:five_prime_UTR
TTATAGAGGGAATCACGCGT+GGG 0.688730 tig0025532:+52735 None:intergenic
ACCGATGGAGTTGTAGATGG+TGG 0.690749 tig0025532:-52079 Msa1423390:five_prime_UTR
GGATGGCTAGAGCATGAACA+TGG 0.693348 tig0025532:+50281 None:intergenic
TGTCAGGGAAACATTGCTGA+AGG 0.696155 tig0025532:-45219 Msa1423390:intron
TGCCTAGCTGAACTAATGGG+CGG 0.697388 tig0025532:-48266 Msa1423390:five_prime_UTR
AGGTTTCCCATCAACCACAA+CGG 0.697501 tig0025532:+48100 None:intergenic
ACAAATGCAATCATTCAACA+AGG 0.705448 tig0025532:+53163 None:intergenic
AAACCATATAGACTGATACA+CGG 0.717551 tig0025532:+54165 None:intergenic
TGCGGAGTTTAGCACATACG+GGG 0.722432 tig0025532:-45164 Msa1423390:CDS
CCCACCATACTAGTTCTCAG+TGG 0.729319 tig0025532:+47504 None:intergenic
GAATTGAACTCAACCCAACG+TGG 0.736332 tig0025532:-49035 Msa1423390:five_prime_UTR
GATGGCGAAAGGATGACGGA+TGG 0.756508 tig0025532:-52508 Msa1423390:five_prime_UTR
GGCGATGGAGATGTACATGG+TGG 0.786952 tig0025532:-51983 Msa1423390:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTTTTTTTTTTTT+TGG - tig0025532:52527-52546 Msa1423390:five_prime_UTR 0.0%
!!! TGATTAATTAACTTTTTAAT+TGG - tig0025532:50370-50389 Msa1423390:five_prime_UTR 10.0%
!! ATTAAATGAGTTAAAATATT+TGG - tig0025532:51988-52007 Msa1423390:five_prime_UTR 10.0%
!! GTCAAAATAAATAAATTTAT+CGG - tig0025532:54687-54706 Msa1423390:intron 10.0%
!! TCAAAATAAATAAATTTATC+GGG - tig0025532:54688-54707 Msa1423390:intron 10.0%
!!! ACACAAAGTTTTTTATATAT+AGG + tig0025532:49051-49070 None:intergenic 15.0%
!!! TTAATTAACTTTTTAATTGG+AGG - tig0025532:50373-50392 Msa1423390:five_prime_UTR 15.0%
!!! TTTTTAGTGAATTAAAGTTA+AGG - tig0025532:51805-51824 Msa1423390:intron 15.0%
!!! ATAAAAGTATCTGAAATTTT+AGG - tig0025532:53358-53377 Msa1423390:intron 15.0%
!! ATCACTATCATTTATTAAAA+TGG + tig0025532:54432-54451 None:intergenic 15.0%
!! AAAAACTTCAGTTATTTATT+TGG + tig0025532:54846-54865 None:intergenic 15.0%
!! AATTGAATATAGAATCCTTA+GGG + tig0025532:44972-44991 None:intergenic 20.0%
!! ACTTATTTGAACTTATTTAG+TGG - tig0025532:45137-45156 Msa1423390:exon 20.0%
!!! AAGTTTTTACACAATTAACA+TGG + tig0025532:45759-45778 None:intergenic 20.0%
!! AAAAATTCAGAGAATTTCAA+TGG + tig0025532:46258-46277 None:intergenic 20.0%
!! ATAAAAGGAAATTGAGTTTA+TGG + tig0025532:46300-46319 None:intergenic 20.0%
!!! AAGTTTTAACACAATTAACA+TGG + tig0025532:46417-46436 None:intergenic 20.0%
!!! CAAAAGTACAAACTTAATAA+TGG + tig0025532:46618-46637 None:intergenic 20.0%
!!! CATTATTAAGTTTGTACTTT+TGG - tig0025532:46616-46635 Msa1423390:intron 20.0%
!! AAGAATATTGTTCTTATAGA+AGG - tig0025532:46913-46932 Msa1423390:intron 20.0%
!! GCTACAAATTCAATTAATAA+AGG + tig0025532:46967-46986 None:intergenic 20.0%
!! TAAGAATATCTAGAAAATAG+AGG + tig0025532:47016-47035 None:intergenic 20.0%
!! TCATTAAAATGCACAAATAT+TGG - tig0025532:48600-48619 Msa1423390:five_prime_UTR 20.0%
!! CAATAAAAAAAGGAAAGAAA+GGG + tig0025532:48731-48750 None:intergenic 20.0%
!! ACAATAAAAAAAGGAAAGAA+AGG + tig0025532:48732-48751 None:intergenic 20.0%
!! GAAAATTCGACAATAAAAAA+AGG + tig0025532:48741-48760 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG - tig0025532:48757-48776 Msa1423390:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG - tig0025532:49072-49091 Msa1423390:intron 20.0%
!! TCTGATTAAGATTAATGTTA+TGG - tig0025532:50808-50827 Msa1423390:intron 20.0%
!! CTGATTAAGATTAATGTTAT+GGG - tig0025532:50809-50828 Msa1423390:intron 20.0%
!! TTAGTAATGCAAATAACTTA+GGG + tig0025532:50907-50926 None:intergenic 20.0%
!! ATTAGTAATGCAAATAACTT+AGG + tig0025532:50908-50927 None:intergenic 20.0%
!! CAATGTCATTAATTACAAAA+AGG + tig0025532:51782-51801 None:intergenic 20.0%
!! TCTCAACAAAAATAATATCA+GGG + tig0025532:52032-52051 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG + tig0025532:52033-52052 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG - tig0025532:48757-48776 Msa1423390:intron 20.0%
!!! ACTGTTAATTGAGTATTTTT+TGG - tig0025532:53437-53456 Msa1423390:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG - tig0025532:49072-49091 Msa1423390:intron 20.0%
!! TGTGTTTAGTATAAAAATCT+TGG - tig0025532:54173-54192 Msa1423390:five_prime_UTR 20.0%
!! GTGTTTAGTATAAAAATCTT+GGG - tig0025532:54174-54193 Msa1423390:five_prime_UTR 20.0%
!!! AACTGAAGTTTTTTAAGTAA+CGG - tig0025532:54853-54872 Msa1423390:five_prime_UTR 20.0%
!!! AAATTTTGATTTCCAATGAT+CGG + tig0025532:55041-55060 None:intergenic 20.0%
!! TGGAAATCAAAATTTATTGA+TGG - tig0025532:55046-55065 Msa1423390:five_prime_UTR 20.0%
! CAATTGAATATAGAATCCTT+AGG + tig0025532:44973-44992 None:intergenic 25.0%
! CATGATACAAAAACAGAATT+TGG + tig0025532:45028-45047 None:intergenic 25.0%
! ATCAAATCTAATGTCCTTAT+TGG - tig0025532:45315-45334 Msa1423390:intron 25.0%
! TTAACATGGTTTAATCATTG+AGG + tig0025532:45745-45764 None:intergenic 25.0%
! TATTTAGCAATTGATCTGTA+TGG + tig0025532:45801-45820 None:intergenic 25.0%
! TACAGATCAATTGCTAAATA+TGG - tig0025532:45801-45820 Msa1423390:CDS 25.0%
!! ATACTTCTAAAGAAAACACT+TGG + tig0025532:45844-45863 None:intergenic 25.0%
! AAAAACTACCAAAGGAAATA+AGG + tig0025532:45907-45926 None:intergenic 25.0%
!!! TATTTCCTTTGGTAGTTTTT+TGG - tig0025532:45907-45926 Msa1423390:intron 25.0%
! TTAAACCAAAAAACTACCAA+AGG + tig0025532:45915-45934 None:intergenic 25.0%
! AAATTTGTACTACTTTGCTA+TGG - tig0025532:46107-46126 Msa1423390:CDS 25.0%
! ATTATCACTAAGTGAATCAT+TGG + tig0025532:46134-46153 None:intergenic 25.0%
! TCAATTTCCTGATTTAATTG+AGG + tig0025532:46229-46248 None:intergenic 25.0%
! ATGTTGAAATGCTAGATAAA+AGG + tig0025532:46315-46334 None:intergenic 25.0%
! TTAACATGGTTTAATCATTG+AGG + tig0025532:45745-45764 None:intergenic 25.0%
! AGTCAATAACACAATTAACA+TGG + tig0025532:46459-46478 None:intergenic 25.0%
!!! TGTGTTATTGACTATGTTTT+TGG - tig0025532:46466-46485 Msa1423390:intron 25.0%
! AGCAAACGACAAAAATTTAA+TGG - tig0025532:46760-46779 Msa1423390:CDS 25.0%
!!! TAGTTGTTTTTGTGAATCAA+AGG - tig0025532:46852-46871 Msa1423390:intron 25.0%
! AGAAAATAGAGGTTTATAGA+GGG + tig0025532:47005-47024 None:intergenic 25.0%
! TAGAAAATAGAGGTTTATAG+AGG + tig0025532:47006-47025 None:intergenic 25.0%
! TGAAAATACAATTAGTGTGA+TGG + tig0025532:47949-47968 None:intergenic 25.0%
! ATAACTGAAACTAAATCGAT+CGG + tig0025532:48207-48226 None:intergenic 25.0%
! GTAACAAAGCACATATAAAA+AGG - tig0025532:48271-48290 Msa1423390:five_prime_UTR 25.0%
!!! GTGTTTTTTAAGTCAATGTT+TGG - tig0025532:48468-48487 Msa1423390:five_prime_UTR 25.0%
! AGAGAGAGAATTAAAAAGAA+GGG + tig0025532:48706-48725 None:intergenic 25.0%
! AAGAGAGAGAATTAAAAAGA+AGG + tig0025532:48707-48726 None:intergenic 25.0%
!!! GATACTTTACTTTTATCTGA+TGG + tig0025532:48983-49002 None:intergenic 25.0%
!!! AGTAAAGTATCTGAGATTTT+AGG - tig0025532:48992-49011 Msa1423390:five_prime_UTR 25.0%
!!! GCTGTTAATTGAGTATTTTT+TGG - tig0025532:49071-49090 Msa1423390:intron 25.0%
! TATGTTTCATGAGTAATTAG+AGG - tig0025532:50162-50181 Msa1423390:intron 25.0%
! GTGTTTGGTATAAAAATCTT+AGG - tig0025532:50194-50213 Msa1423390:intron 25.0%
! CAAATTGTAACAAATCTAGT+TGG - tig0025532:50841-50860 Msa1423390:intron 25.0%
! TACTAATATGCATGTTATGT+TGG - tig0025532:50921-50940 Msa1423390:intron 25.0%
! TTGTTCATAAAAATCATTCG+AGG + tig0025532:51293-51312 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG - tig0025532:51480-51499 Msa1423390:five_prime_UTR 25.0%
! TGAGTTAAAATATTTGGTTG+TGG - tig0025532:51994-52013 Msa1423390:five_prime_UTR 25.0%
!! TTTTTGTTGAGAAAGATTCA+TGG - tig0025532:52040-52059 Msa1423390:five_prime_UTR 25.0%
!! TTTTGTTGAGAAAGATTCAT+GGG - tig0025532:52041-52060 Msa1423390:five_prime_UTR 25.0%
!!! AGTTTTTTCTAAATCAGCAA+AGG + tig0025532:52579-52598 None:intergenic 25.0%
! TATCATTGAATTTATCAGCA+AGG + tig0025532:52635-52654 None:intergenic 25.0%
! ACAAACATAACATGTATAGA+GGG + tig0025532:52801-52820 None:intergenic 25.0%
! AACAAACATAACATGTATAG+AGG + tig0025532:52802-52821 None:intergenic 25.0%
!! CATGTACTTACATTATTTTC+AGG - tig0025532:52868-52887 Msa1423390:five_prime_UTR 25.0%
! TAAATTCCGTTTACCTATAT+TGG - tig0025532:52971-52990 Msa1423390:five_prime_UTR 25.0%
!!! TTGTTTTGTATGAGCATATA+TGG - tig0025532:53111-53130 Msa1423390:five_prime_UTR 25.0%
!! TGTATTAGTTAGTATTGAAC+TGG - tig0025532:53143-53162 Msa1423390:five_prime_UTR 25.0%
! AATAAAGAGAAAAGTGACAA+AGG + tig0025532:53196-53215 None:intergenic 25.0%
!!! GCACGAACTTTTTTATATAT+AGG + tig0025532:53417-53436 None:intergenic 25.0%
! TGTTTCATATGAGTAATTAG+AGG - tig0025532:54142-54161 Msa1423390:five_prime_UTR 25.0%
!!! TGATGTTTCTTTTTTATGTC+TGG - tig0025532:54326-54345 Msa1423390:five_prime_UTR 25.0%
!! CTGAATGTTGACATTTTTAT+TGG - tig0025532:54482-54501 Msa1423390:intron 25.0%
!!! GTACTTAATTTTTCAGCTAT+AGG + tig0025532:54935-54954 None:intergenic 25.0%
!! CATCTAAAATGAGTTAAAGA+TGG + tig0025532:54968-54987 None:intergenic 25.0%
!! CATCTTTAACTCATTTTAGA+TGG - tig0025532:54966-54985 Msa1423390:five_prime_UTR 25.0%
TGAAATTTGCGAAGTGAAAA+CGG + tig0025532:44833-44852 None:intergenic 30.0%
TTTCACTTCGCAAATTTCAT+TGG - tig0025532:44834-44853 Msa1423390:three_prime_UTR 30.0%
!! TATCTGATATTTGCTATCTC+AGG - tig0025532:45091-45110 Msa1423390:three_prime_UTR 30.0%
TAAACTGAAACAATCCAAAC+AGG + tig0025532:45118-45137 None:intergenic 30.0%
!! TAGTGGAATAAGTTTTGTAG+TGG - tig0025532:45154-45173 Msa1423390:CDS 30.0%
! TGACTTATTTGACTTATCTC+AGG - tig0025532:45183-45202 Msa1423390:CDS 30.0%
! GACTTATTTGACTTATCTCA+GGG - tig0025532:45184-45203 Msa1423390:CDS 30.0%
AACACCAATCAAAACAAAAC+AGG + tig0025532:45210-45229 None:intergenic 30.0%
!! AATGTCCTTATTGGTTGTTT+TGG - tig0025532:45324-45343 Msa1423390:intron 30.0%
TTCATCCAAAACAACCAATA+AGG + tig0025532:45332-45351 None:intergenic 30.0%
!!! TATTGGTTGTTTTGGATGAA+TGG - tig0025532:45332-45351 Msa1423390:intron 30.0%
AAACCATATAGACTGATACA+CGG + tig0025532:45562-45581 None:intergenic 30.0%
! TATCAGTCTATATGGTTTGT+AGG - tig0025532:45564-45583 Msa1423390:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG - tig0025532:45668-45687 Msa1423390:intron 30.0%
! ATACCATACCTTATTTCCTT+TGG - tig0025532:45896-45915 Msa1423390:intron 30.0%
TGCAACTTTATCAGCTTAAA+AGG + tig0025532:45991-46010 None:intergenic 30.0%
! TTTTAAGCTGATAAAGTTGC+AGG - tig0025532:45990-46009 Msa1423390:CDS 30.0%
TGATTTAATTGAGGCAATGT+TGG + tig0025532:46220-46239 None:intergenic 30.0%
AACATTGCCTCAATTAAATC+AGG - tig0025532:46219-46238 Msa1423390:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG - tig0025532:45668-45687 Msa1423390:intron 30.0%
ACAAATGCAATCATTCAACA+AGG + tig0025532:46564-46583 None:intergenic 30.0%
TATTGTTCTTATAGAAGGTG+AGG - tig0025532:46918-46937 Msa1423390:intron 30.0%
!! AACTTGTTGATGCTTCAATA+TGG + tig0025532:47087-47106 None:intergenic 30.0%
TGAATGCTTGGATATCTATT+AGG + tig0025532:47147-47166 None:intergenic 30.0%
GAGAAAGTCCAAAAGAATTA+GGG - tig0025532:47503-47522 Msa1423390:five_prime_UTR 30.0%
TCTATTATGCATTTGACACA+CGG - tig0025532:47840-47859 Msa1423390:intron 30.0%
TCGTTTGTCAGAAAAAAATG+TGG - tig0025532:47971-47990 Msa1423390:intron 30.0%
CAGAAGTAATGTAAAAGGTA+AGG - tig0025532:48090-48109 Msa1423390:five_prime_UTR 30.0%
TAATGTAAAAGGTAAGGTGA+CGG - tig0025532:48096-48115 Msa1423390:five_prime_UTR 30.0%
GAAACAATGTTTACCTGTAT+AGG + tig0025532:48403-48422 None:intergenic 30.0%
! TTTTGTCTTTAAGCAAAGAC+TGG - tig0025532:48534-48553 Msa1423390:five_prime_UTR 30.0%
TATGAAGAGTTCAGAGAAAT+AGG - tig0025532:49106-49125 Msa1423390:intron 30.0%
TTCAAAGTTCCAAGAACAAA+CGG - tig0025532:49215-49234 Msa1423390:intron 30.0%
TTATTGCATCTACAGCAAAA+TGG - tig0025532:49326-49345 Msa1423390:five_prime_UTR 30.0%
!!! ATGTTTTGATCATTCTGTGT+TGG - tig0025532:49505-49524 Msa1423390:intron 30.0%
CATACATAAAGTTTCCTGAA+GGG + tig0025532:49591-49610 None:intergenic 30.0%
!!! TAGAGTGGTTTTAAAGACAA+TGG - tig0025532:49727-49746 Msa1423390:five_prime_UTR 30.0%
TTTAAAGACAATGGAAAGAG+AGG - tig0025532:49736-49755 Msa1423390:five_prime_UTR 30.0%
ACATCATATCAATAGACTCA+AGG + tig0025532:49820-49839 None:intergenic 30.0%
TCTATTGATATGATGTCTTG+AGG - tig0025532:49824-49843 Msa1423390:intron 30.0%
CTATTGATATGATGTCTTGA+GGG - tig0025532:49825-49844 Msa1423390:intron 30.0%
ATTAAAAACAAGCAGTGGAA+TGG + tig0025532:49871-49890 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - tig0025532:49917-49936 Msa1423390:five_prime_UTR 30.0%
TAGCTATCATTATGTTCTCT+CGG + tig0025532:49947-49966 None:intergenic 30.0%
TAATGAGCTCTTATGTTGTT+GGG + tig0025532:50076-50095 None:intergenic 30.0%
TTAATGAGCTCTTATGTTGT+TGG + tig0025532:50077-50096 None:intergenic 30.0%
TGTGTCAATAACACTAATAG+TGG + tig0025532:50263-50282 None:intergenic 30.0%
!! AGTAAACTGTTTCTGTTACA+AGG - tig0025532:50302-50321 Msa1423390:five_prime_UTR 30.0%
TTAATTGGAGGTAGTTATGT+TGG - tig0025532:50385-50404 Msa1423390:five_prime_UTR 30.0%
! ACCAAGTAAATTTTCCACAA+GGG + tig0025532:50431-50450 None:intergenic 30.0%
AAACATCACCTTCTTTGTAT+TGG + tig0025532:50517-50536 None:intergenic 30.0%
CCAAAAACAAGTTACATTCA+TGG + tig0025532:50547-50566 None:intergenic 30.0%
!!! CCATGAATGTAACTTGTTTT+TGG - tig0025532:50544-50563 Msa1423390:five_prime_UTR 30.0%
AAAACTCTTCATCAGCAATT+AGG + tig0025532:51243-51262 None:intergenic 30.0%
AGGCATGAAAATTCTATCTT+GGG + tig0025532:51369-51388 None:intergenic 30.0%
AAGGCATGAAAATTCTATCT+TGG + tig0025532:51370-51389 None:intergenic 30.0%
! AATTTTCATGCCTTTTGTGA+AGG - tig0025532:51376-51395 Msa1423390:five_prime_UTR 30.0%
TGTAAATATTCCAAAATCCG+CGG + tig0025532:51534-51553 None:intergenic 30.0%
TACAAAGAATCCAATAACTG+AGG - tig0025532:51550-51569 Msa1423390:five_prime_UTR 30.0%
TTAAAATATTTGGTTGTGGC+AGG - tig0025532:51998-52017 Msa1423390:five_prime_UTR 30.0%
CAACAAAAATAATATCAGGG+TGG + tig0025532:52029-52048 None:intergenic 30.0%
TACTAATATTCGTAGCAAGA+AGG + tig0025532:52144-52163 None:intergenic 30.0%
!! ATTTTAGTGGTTGATGTCAA+TGG - tig0025532:52346-52365 Msa1423390:intron 30.0%
GGATATTCAAATGCAAGAAA+AGG - tig0025532:52481-52500 Msa1423390:five_prime_UTR 30.0%
ATTCAAATGCAAGAAAAGGA+CGG - tig0025532:52485-52504 Msa1423390:five_prime_UTR 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG - tig0025532:53023-53042 Msa1423390:five_prime_UTR 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG - tig0025532:53024-53043 Msa1423390:five_prime_UTR 30.0%
! TTATGTCTCAAAACCTTTTG+AGG - tig0025532:53055-53074 Msa1423390:five_prime_UTR 30.0%
! ATTAGTTAGTATTGAACTGG+TGG - tig0025532:53146-53165 Msa1423390:five_prime_UTR 30.0%
!!! TAGTCTAAGATGTTTTGGTT+TGG - tig0025532:53257-53276 Msa1423390:five_prime_UTR 30.0%
! TTTCAGATACTTTTATCTGC+TGG + tig0025532:53354-53373 None:intergenic 30.0%
TGAACTCTTCTTCATATCTA+TGG + tig0025532:53468-53487 None:intergenic 30.0%
GAAAGAGATTTAGTGTTAGT+TGG - tig0025532:53504-53523 Msa1423390:intron 30.0%
! AGAAACTTTTGCAGAATATG+CGG - tig0025532:53596-53615 Msa1423390:intron 30.0%
TAGAGTGGTTATAAAGACAA+TGG - tig0025532:53710-53729 Msa1423390:intron 30.0%
TATAAAGACAATGGAAAGAG+AGG - tig0025532:53719-53738 Msa1423390:intron 30.0%
AATAAAAACAAGCAGAGGAA+TGG + tig0025532:53853-53872 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - tig0025532:49917-49936 Msa1423390:five_prime_UTR 30.0%
AGCTGAAACATAGTGAAATA+AGG + tig0025532:54096-54115 None:intergenic 30.0%
TATGAGTAATTAGAGGATGA+AGG - tig0025532:54149-54168 Msa1423390:five_prime_UTR 30.0%
!! TTGACATTTTTATTGGTGTC+AGG - tig0025532:54489-54508 Msa1423390:intron 30.0%
!!! TGACATTTTTATTGGTGTCA+GGG - tig0025532:54490-54509 Msa1423390:intron 30.0%
!! ACTTTTAACCGACTTTTTGA+TGG - tig0025532:54531-54550 Msa1423390:intron 30.0%
!!! TTATTTTGACTCCAACTTTC+AGG + tig0025532:54677-54696 None:intergenic 30.0%
! AATAAATTTATCGGGCCTTT+TGG - tig0025532:54696-54715 Msa1423390:intron 30.0%
!!! AGACTCGTTATTTTTCAACT+TGG - tig0025532:54798-54817 Msa1423390:intron 30.0%
!!! GACTCGTTATTTTTCAACTT+GGG - tig0025532:54799-54818 Msa1423390:intron 30.0%
CAAAATGATGAAGAATAGCA+AGG + tig0025532:54898-54917 None:intergenic 30.0%
! GCTATTCTTCATCATTTTGT+AGG - tig0025532:54899-54918 Msa1423390:five_prime_UTR 30.0%
AGTCTGAAAGGAGATTAAAC+GGG + tig0025532:44678-44697 None:intergenic 35.0%
GAGTCTGAAAGGAGATTAAA+CGG + tig0025532:44679-44698 None:intergenic 35.0%
TTGTGTCTGAAAAATCGCAA+TGG + tig0025532:44707-44726 None:intergenic 35.0%
GAGAAAAAAGGAGCTTCAAT+CGG + tig0025532:44865-44884 None:intergenic 35.0%
TTGCAGAGAAGAGAGAAAAA+AGG + tig0025532:44877-44896 None:intergenic 35.0%
TGCTTCGAAAACTCTTGATT+AGG - tig0025532:44931-44950 Msa1423390:three_prime_UTR 35.0%
GCTTCGAAAACTCTTGATTA+GGG - tig0025532:44932-44951 Msa1423390:three_prime_UTR 35.0%
GTTTATACTCTCAAACCCTA+AGG - tig0025532:44954-44973 Msa1423390:three_prime_UTR 35.0%
TTTGTGCTCACTGCTAAAAT+GGG + tig0025532:45259-45278 None:intergenic 35.0%
! TTTTGTGCTCACTGCTAAAA+TGG + tig0025532:45260-45279 None:intergenic 35.0%
ATATAGACTGATACACGGAT+AGG + tig0025532:45557-45576 None:intergenic 35.0%
TATCCGTGTATCAGTCTATA+TGG - tig0025532:45556-45575 Msa1423390:intron 35.0%
TATGGTTTAATCAGTCTGCA+GGG + tig0025532:45783-45802 None:intergenic 35.0%
CTACCAAAGGAAATAAGGTA+TGG + tig0025532:45902-45921 None:intergenic 35.0%
GAAGCATGACATTATTGACA+TGG + tig0025532:46165-46184 None:intergenic 35.0%
! GTTTTCATGAGCTATCTTGA+TGG - tig0025532:46496-46515 Msa1423390:intron 35.0%
! TTCTAAGTGTGACACGTTTT+TGG + tig0025532:46716-46735 None:intergenic 35.0%
! ATTTAATGGACCACACACTA+TGG - tig0025532:46774-46793 Msa1423390:CDS 35.0%
CTAATCCTATTTGATCTCCT+GGG + tig0025532:47186-47205 None:intergenic 35.0%
TCTAATCCTATTTGATCTCC+TGG + tig0025532:47187-47206 None:intergenic 35.0%
GAGAAGGTCCAAAAGAATTA+GGG - tig0025532:47323-47342 Msa1423390:CDS 35.0%
! AACAATGGCCCTAATTCTTT+TGG + tig0025532:47334-47353 None:intergenic 35.0%
GGAGAAAGTCCAAAAGAATT+AGG - tig0025532:47502-47521 Msa1423390:five_prime_UTR 35.0%
GAGAAGGTCAAAAAGAATCA+GGG - tig0025532:47677-47696 Msa1423390:five_prime_UTR 35.0%
AAAAATGTGGAGAAACAAGC+TGG - tig0025532:47984-48003 Msa1423390:five_prime_UTR 35.0%
AGCTGGAGATATCAAGAAAT+TGG - tig0025532:48001-48020 Msa1423390:five_prime_UTR 35.0%
GAGTGCAGAAGTAATGTAAA+AGG - tig0025532:48085-48104 Msa1423390:five_prime_UTR 35.0%
AATCTAGTCCAGAAAGAGAA+AGG - tig0025532:48309-48328 Msa1423390:five_prime_UTR 35.0%
CCTGTATAGGAAAGAGATAA+TGG + tig0025532:48390-48409 None:intergenic 35.0%
CCATTATCTCTTTCCTATAC+AGG - tig0025532:48387-48406 Msa1423390:five_prime_UTR 35.0%
TAACAACCCTCTTACTCATT+GGG - tig0025532:48425-48444 Msa1423390:five_prime_UTR 35.0%
! AAATATTGGCTGTTGAGAGA+AGG - tig0025532:48614-48633 Msa1423390:five_prime_UTR 35.0%
! AATATTGGCTGTTGAGAGAA+GGG - tig0025532:48615-48634 Msa1423390:five_prime_UTR 35.0%
CAAGCTTATGTCTCAAAAGA+TGG + tig0025532:48674-48693 None:intergenic 35.0%
CCAAACATGATGAATGATTG+AGG + tig0025532:48827-48846 None:intergenic 35.0%
CCTCAATCATTCATCATGTT+TGG - tig0025532:48824-48843 Msa1423390:intron 35.0%
! TCTTGTTTCCTAAGACTCTT+AGG - tig0025532:48867-48886 Msa1423390:intron 35.0%
CTCTGAACTCTTCATATCTA+TGG + tig0025532:49102-49121 None:intergenic 35.0%
GAAAGAGATTTAGTGTTAGC+TGG - tig0025532:49135-49154 Msa1423390:intron 35.0%
TCAAAGTTCCAAGAACAAAC+GGG - tig0025532:49216-49235 Msa1423390:intron 35.0%
CAACAAAAATTTGAGAAGCC+GGG + tig0025532:49277-49296 None:intergenic 35.0%
GCAACAAAAATTTGAGAAGC+CGG + tig0025532:49278-49297 None:intergenic 35.0%
! GTTGCTTTGTATTCTTCTGA+TGG - tig0025532:49293-49312 Msa1423390:five_prime_UTR 35.0%
ATGTGGATACTAAAGTGAGA+AGG - tig0025532:49349-49368 Msa1423390:intron 35.0%
TACTAAAGTGAGAAGGAAAG+AGG - tig0025532:49356-49375 Msa1423390:intron 35.0%
AAAACATTCAAGCACAAACC+TGG + tig0025532:49492-49511 None:intergenic 35.0%
! TGCTTTTATGATTTCCCTTC+AGG - tig0025532:49574-49593 Msa1423390:intron 35.0%
GCATACATAAAGTTTCCTGA+AGG + tig0025532:49592-49611 None:intergenic 35.0%
GGAAACTTTATGTATGCTTC+AGG - tig0025532:49595-49614 Msa1423390:intron 35.0%
! GGAAACTTTTGCCGAATATA+CGG - tig0025532:49616-49635 Msa1423390:intron 35.0%
CTATGCACAAAGAGTTAACT+CGG - tig0025532:49679-49698 Msa1423390:five_prime_UTR 35.0%
CCACAATTAAAAACAAGCAG+TGG + tig0025532:49876-49895 None:intergenic 35.0%
!!! CCACTGCTTGTTTTTAATTG+TGG - tig0025532:49873-49892 Msa1423390:intron 35.0%
!!! CTGCTTGTTTTTAATTGTGG+AGG - tig0025532:49876-49895 Msa1423390:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG + tig0025532:50047-50066 None:intergenic 35.0%
TGAAATAAGGATATACCCTG+TGG + tig0025532:50105-50124 None:intergenic 35.0%
CATGAGTAATTAGAGGATGA+AGG - tig0025532:50169-50188 Msa1423390:intron 35.0%
! AACACTAATAGTGGCATTGA+CGG + tig0025532:50254-50273 None:intergenic 35.0%
TCTGTTACAAGGCTTGTATT+TGG - tig0025532:50313-50332 Msa1423390:five_prime_UTR 35.0%
TCCCTTGTGGAAAATTTACT+TGG - tig0025532:50427-50446 Msa1423390:five_prime_UTR 35.0%
! GACCAAGTAAATTTTCCACA+AGG + tig0025532:50432-50451 None:intergenic 35.0%
AATTTACTTGGTCAACTTGC+TGG - tig0025532:50439-50458 Msa1423390:five_prime_UTR 35.0%
TTGGTTGCCATACATGATTA+GGG + tig0025532:50498-50517 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG + tig0025532:50499-50518 None:intergenic 35.0%
TATGGCAACCAATACAAAGA+AGG - tig0025532:50506-50525 Msa1423390:five_prime_UTR 35.0%
GGAAACATCAAATGACATGT+AGG - tig0025532:50578-50597 Msa1423390:intron 35.0%
ACATCAAATGACATGTAGGT+AGG - tig0025532:50582-50601 Msa1423390:intron 35.0%
! GCTACTGTCATTACATTTTC+TGG - tig0025532:50613-50632 Msa1423390:intron 35.0%
!!! CATTTTCTGGAACTGACTTT+CGG - tig0025532:50626-50645 Msa1423390:intron 35.0%
! ACACTGCCAGTTATGAATTT+TGG + tig0025532:50783-50802 None:intergenic 35.0%
! AACAGCAAAAGTGTACTTGA+AGG + tig0025532:50966-50985 None:intergenic 35.0%
ATAATGCAGTTCAATAAGCG+AGG - tig0025532:51029-51048 Msa1423390:intron 35.0%
AAGCTTGAGACTTATCGAAA+TGG - tig0025532:51107-51126 Msa1423390:intron 35.0%
AGATGTATGCACAACTTCTT+CGG + tig0025532:51138-51157 None:intergenic 35.0%
TGTAATCTCAAAACGCTAAG+TGG - tig0025532:51164-51183 Msa1423390:intron 35.0%
CGATGCTTCAACTAAAAAAG+TGG - tig0025532:51267-51286 Msa1423390:five_prime_UTR 35.0%
TTATGAACAAGTCACCTAGA+TGG - tig0025532:51303-51322 Msa1423390:five_prime_UTR 35.0%
TATGAACAAGTCACCTAGAT+GGG - tig0025532:51304-51323 Msa1423390:five_prime_UTR 35.0%
! AACTCGACTTCTAGAAACTA+TGG - tig0025532:51404-51423 Msa1423390:five_prime_UTR 35.0%
! AAGTACCTTTTCATTTACCG+CGG - tig0025532:51514-51533 Msa1423390:five_prime_UTR 35.0%
AAAATCCGCGGTAAATGAAA+AGG + tig0025532:51522-51541 None:intergenic 35.0%
! TTTTCATTTACCGCGGATTT+TGG - tig0025532:51521-51540 Msa1423390:five_prime_UTR 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG - tig0025532:51594-51613 Msa1423390:five_prime_UTR 35.0%
!! TTAAACCCTCTAAAACTGGA+TGG + tig0025532:51602-51621 None:intergenic 35.0%
AGATACCATTTGAAGAGACT+TGG - tig0025532:51665-51684 Msa1423390:five_prime_UTR 35.0%
GATACCATTTGAAGAGACTT+GGG - tig0025532:51666-51685 Msa1423390:five_prime_UTR 35.0%
!! CAAAGAAACAGCCTTATTGA+TGG + tig0025532:51714-51733 None:intergenic 35.0%
!! AATAAGGCTGTTTCTTTGTG+TGG - tig0025532:51716-51735 Msa1423390:five_prime_UTR 35.0%
!! ATAAGGCTGTTTCTTTGTGT+GGG - tig0025532:51717-51736 Msa1423390:five_prime_UTR 35.0%
GTTTCTTTGTGTGGGAAAAA+TGG - tig0025532:51725-51744 Msa1423390:five_prime_UTR 35.0%
ATTAAAAACTTACCCTGTGC+TGG + tig0025532:51756-51775 None:intergenic 35.0%
! CATCTAAAGTCACACATGAT+CGG - tig0025532:51850-51869 Msa1423390:intron 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG - tig0025532:51949-51968 Msa1423390:five_prime_UTR 35.0%
CACTGTATCACTAAAACATG+CGG + tig0025532:52191-52210 None:intergenic 35.0%
! AAATTTTCATTCCGCACAGA+AGG + tig0025532:52330-52349 None:intergenic 35.0%
! GTGCGGAATGAAAATTTTAG+TGG - tig0025532:52333-52352 Msa1423390:intron 35.0%
TTCAAATGCAAGAAAAGGAC+GGG - tig0025532:52486-52505 Msa1423390:five_prime_UTR 35.0%
TTACGTGGATTCAATTTACG+TGG + tig0025532:52659-52678 None:intergenic 35.0%
TCATGGCCAATATAGGTAAA+CGG + tig0025532:52980-52999 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG + tig0025532:53016-53035 None:intergenic 35.0%
TGAACAATTCCTTCCTCAAA+AGG + tig0025532:53071-53090 None:intergenic 35.0%
!! TTTTGAGGAAGGAATTGTTC+AGG - tig0025532:53070-53089 Msa1423390:five_prime_UTR 35.0%
!! GGTCTTAGTCTAAGATGTTT+TGG - tig0025532:53252-53271 Msa1423390:five_prime_UTR 35.0%
TGCTGTAATGTTACTGTACT+TGG - tig0025532:53299-53318 Msa1423390:five_prime_UTR 35.0%
GAAGAAGAGTTCAGAGAAAT+AGG - tig0025532:53475-53494 Msa1423390:intron 35.0%
!! AGTGTTAGTTGGTGTTGTAA+TGG - tig0025532:53515-53534 Msa1423390:intron 35.0%
!! GTGTTAGTTGGTGTTGTAAT+GGG - tig0025532:53516-53535 Msa1423390:intron 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG + tig0025532:53578-53597 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG + tig0025532:53579-53598 None:intergenic 35.0%
GTTAACAACTCTTTGTGCAT+AGG + tig0025532:53661-53680 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG - tig0025532:53662-53681 Msa1423390:intron 35.0%
GTTTCCTAAGCAAATATGAC+CGG + tig0025532:53771-53790 None:intergenic 35.0%
ACATCGTATCAATAGACTCA+AGG + tig0025532:53801-53820 None:intergenic 35.0%
CCACAAATAAAAACAAGCAG+AGG + tig0025532:53858-53877 None:intergenic 35.0%
!!! CCTCTGCTTGTTTTTATTTG+TGG - tig0025532:53855-53874 Msa1423390:intron 35.0%
!!! CTGCTTGTTTTTATTTGTGG+AGG - tig0025532:53858-53877 Msa1423390:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG + tig0025532:50047-50066 None:intergenic 35.0%
TAATGAGCTCTTCTGTTGTT+GGG + tig0025532:54054-54073 None:intergenic 35.0%
TTAATGAGCTCTTCTGTTGT+TGG + tig0025532:54055-54074 None:intergenic 35.0%
! AACACTAATAGTGGCATTGA+CGG + tig0025532:50254-50273 None:intergenic 35.0%
! TGTGTCGATAACACTAATAG+TGG + tig0025532:54251-54270 None:intergenic 35.0%
GTTGAAGAAAACGTTGTACT+TGG - tig0025532:54285-54304 Msa1423390:five_prime_UTR 35.0%
TACAGTCCTTGATTTCTTGA+AGG - tig0025532:54455-54474 Msa1423390:intron 35.0%
ACAGTCCTTGATTTCTTGAA+GGG - tig0025532:54456-54475 Msa1423390:intron 35.0%
AGTTACCCTTCAAGAAATCA+AGG + tig0025532:54464-54483 None:intergenic 35.0%
TCTGAAAATATCACGCCAAA+AGG + tig0025532:54714-54733 None:intergenic 35.0%
TAAGCGCGAGACTAATATTT+GGG - tig0025532:54738-54757 Msa1423390:intron 35.0%
CAATGGAGAAAGAGTCTGAA+AGG + tig0025532:44690-44709 None:intergenic 40.0%
! TCCAATCTGAAGCTCGAAAA+TGG - tig0025532:44755-44774 Msa1423390:three_prime_UTR 40.0%
CAGAGAAGAGAGCTAAAGAT+CGG + tig0025532:44802-44821 None:intergenic 40.0%
!! TAGTCGTTTTCTCTCTCACA+AGG - tig0025532:44899-44918 Msa1423390:three_prime_UTR 40.0%
!!! AGGGCCTGTTTTGTTTTGAT+TGG - tig0025532:45203-45222 Msa1423390:CDS 40.0%
GAAGCTATTCGAGAAGAAGA+GGG - tig0025532:45354-45373 Msa1423390:intron 40.0%
ATTTGACCAGATTCGACAAG+TGG - tig0025532:45377-45396 Msa1423390:intron 40.0%
CTCTGAATCTGAACAGTCTT+AGG + tig0025532:45403-45422 None:intergenic 40.0%
CTAAGACTGTTCAGATTCAG+AGG - tig0025532:45401-45420 Msa1423390:intron 40.0%
TTCAGATTCAGAGGAAGAAG+AGG - tig0025532:45410-45429 Msa1423390:intron 40.0%
!!! AGAAGAGGATTTTGAAGCAG+AGG - tig0025532:45425-45444 Msa1423390:intron 40.0%
!!! GATTTTGAAGCAGAGGTTGA+AGG - tig0025532:45432-45451 Msa1423390:intron 40.0%
! CCAAATTTCTAGACAGCTCA+AGG + tig0025532:45495-45514 None:intergenic 40.0%
CCTTGAGCTGTCTAGAAATT+TGG - tig0025532:45492-45511 Msa1423390:intron 40.0%
GCTGTCTAGAAATTTGGATG+TGG - tig0025532:45498-45517 Msa1423390:intron 40.0%
GTATGGTTTAATCAGTCTGC+AGG + tig0025532:45784-45803 None:intergenic 40.0%
! TGAGCTATCTTGATGGATGT+AGG - tig0025532:46503-46522 Msa1423390:intron 40.0%
! GAGCTATCTTGATGGATGTA+GGG - tig0025532:46504-46523 Msa1423390:intron 40.0%
! ATCTTGATGGATGTAGGGAA+AGG - tig0025532:46509-46528 Msa1423390:intron 40.0%
ACACTATGGCATGATAGAGT+TGG - tig0025532:46788-46807 Msa1423390:CDS 40.0%
!! TAGAGTTGGTGTGTGAATGT+AGG - tig0025532:46802-46821 Msa1423390:CDS 40.0%
! AACACTACCTTTTCAGCTGA+AGG - tig0025532:47051-47070 Msa1423390:intron 40.0%
ACTTGAACCTTCAGCTGAAA+AGG + tig0025532:47061-47080 None:intergenic 40.0%
ATGGTCTCAGCGAAAAAGAA+AGG + tig0025532:47123-47142 None:intergenic 40.0%
GCTTGGATATCTATTAGGCA+TGG + tig0025532:47142-47161 None:intergenic 40.0%
CCAATCGGATATTGAATGCT+TGG + tig0025532:47159-47178 None:intergenic 40.0%
CCAAGCATTCAATATCCGAT+TGG - tig0025532:47156-47175 Msa1423390:intron 40.0%
AATATCCGATTGGAAAACCC+AGG - tig0025532:47166-47185 Msa1423390:intron 40.0%
GAAAACCCAGGAGATCAAAT+AGG - tig0025532:47178-47197 Msa1423390:intron 40.0%
ACCACCACCTACTACAATAT+CGG + tig0025532:47295-47314 None:intergenic 40.0%
! ATATTGTAGTAGGTGGTGGT+GGG - tig0025532:47295-47314 Msa1423390:CDS 40.0%
GGAGAAGGTCCAAAAGAATT+AGG - tig0025532:47322-47341 Msa1423390:CDS 40.0%
ATTAGGGCCATTGTTGAAGT+TGG - tig0025532:47339-47358 Msa1423390:CDS 40.0%
!! TAGATGGTGGTGGAGAAATA+AGG - tig0025532:47382-47401 Msa1423390:exon 40.0%
! AACCATGGCCCTAATTCTTT+TGG + tig0025532:47514-47533 None:intergenic 40.0%
GGAGAAGGTCAAAAAGAATC+AGG - tig0025532:47676-47695 Msa1423390:five_prime_UTR 40.0%
GTCAAAAAGAATCAGGGCAA+TGG - tig0025532:47683-47702 Msa1423390:five_prime_UTR 40.0%
GCGAGATATTAGAAAAGCTG+AGG - tig0025532:47769-47788 Msa1423390:intron 40.0%
TGAAATGGAGCTATGAAGCA+CGG + tig0025532:47923-47942 None:intergenic 40.0%
TGCTTCATAGCTCCATTTCA+AGG - tig0025532:47923-47942 Msa1423390:intron 40.0%
! TTAGTGTGATGGCCTTGAAA+TGG + tig0025532:47938-47957 None:intergenic 40.0%
! GCTTTTACCTATATCAGGTG+TGG + tig0025532:48122-48141 None:intergenic 40.0%
AGACGAACAAACTACCAATC+TGG - tig0025532:48341-48360 Msa1423390:five_prime_UTR 40.0%
GAACACAGTTGAAACCAGAT+TGG + tig0025532:48358-48377 None:intergenic 40.0%
CTAACAACCCTCTTACTCAT+TGG - tig0025532:48424-48443 Msa1423390:five_prime_UTR 40.0%
ACAGAACCCAATGAGTAAGA+GGG + tig0025532:48434-48453 None:intergenic 40.0%
! ACTCTTAGGCTAAGAGGTTT+TGG - tig0025532:48881-48900 Msa1423390:five_prime_UTR 40.0%
!!! TAGGCTAAGAGGTTTTGGTT+TGG - tig0025532:48886-48905 Msa1423390:five_prime_UTR 40.0%
!! AGTGTTAGCTGGTGTTGTAA+TGG - tig0025532:49146-49165 Msa1423390:intron 40.0%
!! GTGTTAGCTGGTGTTGTAAT+GGG - tig0025532:49147-49166 Msa1423390:intron 40.0%
!! CTTGGAACTTTGAAGCCAAA+GGG + tig0025532:49209-49228 None:intergenic 40.0%
!! TCTTGGAACTTTGAAGCCAA+AGG + tig0025532:49210-49229 None:intergenic 40.0%
CAAAGTTCCAAGAACAAACG+GGG - tig0025532:49217-49236 Msa1423390:intron 40.0%
! TTTTGTTCCCCGTTTGTTCT+TGG + tig0025532:49227-49246 None:intergenic 40.0%
CATCTACAGCAAAATGGATG+TGG - tig0025532:49332-49351 Msa1423390:intron 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG - tig0025532:49362-49381 Msa1423390:intron 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG - tig0025532:49363-49382 Msa1423390:intron 40.0%
TGGGTAGTCTTTGTGATCAA+AGG - tig0025532:49382-49401 Msa1423390:intron 40.0%
GGGTAGTCTTTGTGATCAAA+GGG - tig0025532:49383-49402 Msa1423390:intron 40.0%
CGAGTTAACTCTTTGTGCAT+AGG + tig0025532:49681-49700 None:intergenic 40.0%
GAGTTAACTCGGAAAGAAAG+CGG - tig0025532:49690-49709 Msa1423390:five_prime_UTR 40.0%
GAGAACCCAACAACCTAAAA+GGG + tig0025532:49998-50017 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG + tig0025532:49999-50018 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG - tig0025532:50005-50024 Msa1423390:five_prime_UTR 40.0%
AGCTCTTATGTTGTTGGGTT+GGG + tig0025532:50071-50090 None:intergenic 40.0%
AGCTGACACGTAGTGAAATA+AGG + tig0025532:50118-50137 None:intergenic 40.0%
ATTGGAGGTAGTTATGTTGG+AGG - tig0025532:50388-50407 Msa1423390:five_prime_UTR 40.0%
ACTGATCCCCTAATCATGTA+TGG - tig0025532:50488-50507 Msa1423390:five_prime_UTR 40.0%
TGGTTGCCATACATGATTAG+GGG + tig0025532:50497-50516 None:intergenic 40.0%
!!! TTGTTTTTGGAGATCCACAC+AGG - tig0025532:50557-50576 Msa1423390:five_prime_UTR 40.0%
GTCATTTGATGTTTCCTGTG+TGG + tig0025532:50574-50593 None:intergenic 40.0%
! GACATGTAGGTAGGTTTTTC+TGG - tig0025532:50591-50610 Msa1423390:intron 40.0%
ACCGAGCCAAAATTCATAAC+TGG - tig0025532:50774-50793 Msa1423390:intron 40.0%
!!! GCCAGTTATGAATTTTGGCT+CGG + tig0025532:50778-50797 None:intergenic 40.0%
AATAGAAAGCCCGCAACAAA+TGG - tig0025532:51083-51102 Msa1423390:intron 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG + tig0025532:51095-51114 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG + tig0025532:51096-51115 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG - tig0025532:51110-51129 Msa1423390:intron 40.0%
GAAGAAGTTGTGCATACATC+TGG - tig0025532:51137-51156 Msa1423390:intron 40.0%
ACTCTTCATCAGCAATTAGG+TGG + tig0025532:51240-51259 None:intergenic 40.0%
GAGTTATCTGCCTTCACAAA+AGG + tig0025532:51389-51408 None:intergenic 40.0%
! TCGACTTCTAGAAACTATGG+TGG - tig0025532:51407-51426 Msa1423390:five_prime_UTR 40.0%
TCTAGAAACTATGGTGGTAC+CGG - tig0025532:51413-51432 Msa1423390:five_prime_UTR 40.0%
ACTGATACTCAAACCAATGC+CGG + tig0025532:51435-51454 None:intergenic 40.0%
TAAGTGCCTAGCTGAACTAA+TGG - tig0025532:51454-51473 Msa1423390:five_prime_UTR 40.0%
AAGTGCCTAGCTGAACTAAT+GGG - tig0025532:51455-51474 Msa1423390:five_prime_UTR 40.0%
!! GAAAAGGTACTTCCAATCTG+TGG + tig0025532:51506-51525 None:intergenic 40.0%
TCCAATAACTGAGGTGAAGA+AGG - tig0025532:51559-51578 Msa1423390:five_prime_UTR 40.0%
ACCTTCTTCACCTCAGTTAT+TGG + tig0025532:51563-51582 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG - tig0025532:51593-51612 Msa1423390:five_prime_UTR 40.0%
!! GGCTTTAAACCCTCTAAAAC+TGG + tig0025532:51606-51625 None:intergenic 40.0%
! TTTAAAGCCGTTGTGGTTGA+TGG - tig0025532:51617-51636 Msa1423390:five_prime_UTR 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG - tig0025532:51618-51637 Msa1423390:five_prime_UTR 40.0%
GTATCCCAAGTCTCTTCAAA+TGG + tig0025532:51673-51692 None:intergenic 40.0%
CGATCATGTGTGACTTTAGA+TGG + tig0025532:51852-51871 None:intergenic 40.0%
GAGAAAGATTCATGGGTTTG+TGG - tig0025532:52048-52067 Msa1423390:five_prime_UTR 40.0%
CAAACTGAAGTTGAACCATC+AGG + tig0025532:52304-52323 None:intergenic 40.0%
! TGCCTTGAAAAACTTTGGAG+CGG - tig0025532:52382-52401 Msa1423390:intron 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG + tig0025532:52387-52406 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG + tig0025532:52457-52476 None:intergenic 40.0%
AAGCAAGCATCAAACTTGTG+AGG + tig0025532:52458-52477 None:intergenic 40.0%
CAAGTTTGATGCTTGCTTCA+AGG - tig0025532:52460-52479 Msa1423390:intron 40.0%
! AATCCACGTAACTTGCATGT+TGG - tig0025532:52668-52687 Msa1423390:five_prime_UTR 40.0%
TTGAAGCAACTCGTCGAATT+CGG - tig0025532:52892-52911 Msa1423390:five_prime_UTR 40.0%
CGAATGGTGAATGTAGTGAA+AGG - tig0025532:52943-52962 Msa1423390:five_prime_UTR 40.0%
! ATGGATTACATCTGCTGTCA+TGG + tig0025532:52997-53016 None:intergenic 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG - tig0025532:53028-53047 Msa1423390:five_prime_UTR 40.0%
! TGTTTGAAATGTGGGATGGA+TGG - tig0025532:53032-53051 Msa1423390:five_prime_UTR 40.0%
!! GTCTCAAAACCTTTTGAGGA+AGG - tig0025532:53059-53078 Msa1423390:five_prime_UTR 40.0%
TTGTTAACTCGGAAAGAGAG+CGG - tig0025532:53673-53692 Msa1423390:intron 40.0%
GAGTCTATTGATACGATGTC+TGG - tig0025532:53802-53821 Msa1423390:intron 40.0%
TATTGATACGATGTCTGGAG+AGG - tig0025532:53807-53826 Msa1423390:intron 40.0%
! GAGCTCTCAGTATGTTTTCT+CGG + tig0025532:53928-53947 None:intergenic 40.0%
! AACAACCTAAAAGGGCTAGT+CGG + tig0025532:53968-53987 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG - tig0025532:53968-53987 Msa1423390:intron 40.0%
GAGAACCCAACAACCTAAAA+GGG + tig0025532:49998-50017 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG + tig0025532:49999-50018 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG - tig0025532:50005-50024 Msa1423390:five_prime_UTR 40.0%
AGCTCATTAAAGTGACTGCA+GGG - tig0025532:54065-54084 Msa1423390:five_prime_UTR 40.0%
AGAAGACAATGCAAACTGCA+GGG + tig0025532:54396-54415 None:intergenic 40.0%
CATTCTGGCCATCAAAAAGT+CGG + tig0025532:54542-54561 None:intergenic 40.0%
!! ACTTTTTGATGGCCAGAATG+CGG - tig0025532:54542-54561 Msa1423390:intron 40.0%
AATGCGGAGTTTAGCACATA+CGG - tig0025532:54558-54577 Msa1423390:intron 40.0%
!! TTGACTCCAACTTTCAGGTT+GGG + tig0025532:54672-54691 None:intergenic 40.0%
! TTTGACTCCAACTTTCAGGT+TGG + tig0025532:54673-54692 None:intergenic 40.0%
CTAAGCGCGAGACTAATATT+TGG - tig0025532:54737-54756 Msa1423390:intron 40.0%
ATTTCCAATGATCGGCATTG+GGG + tig0025532:55033-55052 None:intergenic 40.0%
GATTTCCAATGATCGGCATT+GGG + tig0025532:55034-55053 None:intergenic 40.0%
TGATTTCCAATGATCGGCAT+TGG + tig0025532:55035-55054 None:intergenic 40.0%
GAAGAGCGGAAAAATCGCAA+TGG + tig0025532:44737-44756 None:intergenic 45.0%
!! GCCATTTTCGAGCTTCAGAT+TGG + tig0025532:44759-44778 None:intergenic 45.0%
ATGGCAATTGAAGCTCGTTG+AGG - tig0025532:44774-44793 Msa1423390:three_prime_UTR 45.0%
TTGCTATCTCAGGTCCTGTT+TGG - tig0025532:45101-45120 Msa1423390:three_prime_UTR 45.0%
GGAAGCTATTCGAGAAGAAG+AGG - tig0025532:45353-45372 Msa1423390:intron 45.0%
CATGGTTTGATCAGTCTGCA+AGG + tig0025532:46441-46460 None:intergenic 45.0%
CTCTATCATGCCATAGTGTG+TGG + tig0025532:46787-46806 None:intergenic 45.0%
TTATAGAGGGAATCACGCGT+GGG + tig0025532:46992-47011 None:intergenic 45.0%
TTTATAGAGGGAATCACGCG+TGG + tig0025532:46993-47012 None:intergenic 45.0%
! GATCTCCTGGGTTTTCCAAT+CGG + tig0025532:47174-47193 None:intergenic 45.0%
AGGATTAGAGTTCGATGCGA+TGG - tig0025532:47198-47217 Msa1423390:intron 45.0%
!! ATGACGGATGGTGTTGAAGT+TGG - tig0025532:47228-47247 Msa1423390:intron 45.0%
AGGAGGACCGATATTGTAGT+AGG - tig0025532:47285-47304 Msa1423390:CDS 45.0%
AGGACCGATATTGTAGTAGG+TGG - tig0025532:47288-47307 Msa1423390:CDS 45.0%
ACCGATATTGTAGTAGGTGG+TGG - tig0025532:47291-47310 Msa1423390:CDS 45.0%
! GATATTGTAGTAGGTGGTGG+TGG - tig0025532:47294-47313 Msa1423390:CDS 45.0%
! TATTGTAGTAGGTGGTGGTG+GGG - tig0025532:47296-47315 Msa1423390:CDS 45.0%
!! TGGTGGTGGAGAAATAAGGA+TGG - tig0025532:47386-47405 Msa1423390:exon 45.0%
GGTGGAGAAATAAGGATGGA+TGG - tig0025532:47390-47409 Msa1423390:five_prime_UTR 45.0%
! AGGATGGATGGTGTTGAAGT+TGG - tig0025532:47402-47421 Msa1423390:five_prime_UTR 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG - tig0025532:47405-47424 Msa1423390:five_prime_UTR 45.0%
AGGAGGACAGATGGTGTAAT+AGG - tig0025532:47465-47484 Msa1423390:five_prime_UTR 45.0%
AGGACAGATGGTGTAATAGG+TGG - tig0025532:47468-47487 Msa1423390:five_prime_UTR 45.0%
ACAGATGGTGTAATAGGTGG+TGG - tig0025532:47471-47490 Msa1423390:five_prime_UTR 45.0%
! ATGGTGTAATAGGTGGTGGT+GGG - tig0025532:47475-47494 Msa1423390:five_prime_UTR 45.0%
GTCCAAAAGAATTAGGGCCA+TGG - tig0025532:47329-47348 Msa1423390:CDS 45.0%
ATTAGGGCCATGGTTGAAGT+TGG - tig0025532:47519-47538 Msa1423390:five_prime_UTR 45.0%
!! TAGATGGTGGTGGAGAAATG+AGG - tig0025532:47562-47581 Msa1423390:five_prime_UTR 45.0%
! AGGATGGATGGTGTTGAAGT+TGG - tig0025532:47402-47421 Msa1423390:five_prime_UTR 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG - tig0025532:47405-47424 Msa1423390:five_prime_UTR 45.0%
ACCACCATCTACAACTCCAT+CGG + tig0025532:47649-47668 None:intergenic 45.0%
ATCAGGGCAATGGATGAAGT+TGG - tig0025532:47693-47712 Msa1423390:five_prime_UTR 45.0%
TGTGTCTGACACGACACTTA+TGG + tig0025532:47873-47892 None:intergenic 45.0%
! GTGCGGCTTTTACCTATATC+AGG + tig0025532:48127-48146 None:intergenic 45.0%
AATCGATCGGAGAGTTCTAC+CGG + tig0025532:48194-48213 None:intergenic 45.0%
GATCTGCACCTTTCTCTTTC+TGG + tig0025532:48320-48339 None:intergenic 45.0%
CACAGAACCCAATGAGTAAG+AGG + tig0025532:48435-48454 None:intergenic 45.0%
!!! AAAGACTGGTTTTGCGCCTA+GGG - tig0025532:48548-48567 Msa1423390:five_prime_UTR 45.0%
GAGTACTAATCATGCTCCCT+AGG + tig0025532:48567-48586 None:intergenic 45.0%
CCTCTTAGCCTAAGAGTCTT+AGG + tig0025532:48878-48897 None:intergenic 45.0%
CCTAAGACTCTTAGGCTAAG+AGG - tig0025532:48875-48894 Msa1423390:five_prime_UTR 45.0%
TCATTCAAGCACATAGAGCC+CGG - tig0025532:49256-49275 Msa1423390:five_prime_UTR 45.0%
AATGGCAGAAGGGTTTCTGT+AGG + tig0025532:49467-49486 None:intergenic 45.0%
AAACCTGGTCAATGGCAGAA+GGG + tig0025532:49477-49496 None:intergenic 45.0%
TCAAGCACAAACCTGGTCAA+TGG + tig0025532:49485-49504 None:intergenic 45.0%
! CTTTTGCCGAATATACGGCT+AGG - tig0025532:49621-49640 Msa1423390:intron 45.0%
GTTTGAGAAGCAGCATAGAG+TGG - tig0025532:49712-49731 Msa1423390:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG - tig0025532:49745-49764 Msa1423390:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG - tig0025532:49750-49769 Msa1423390:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG - tig0025532:49751-49770 Msa1423390:five_prime_UTR 45.0%
GTTTCCTGAGCAAATGTGAC+AGG + tig0025532:49788-49807 None:intergenic 45.0%
AGCAGTGGAATGGTTCACAA+GGG + tig0025532:49861-49880 None:intergenic 45.0%
AAGCAGTGGAATGGTTCACA+AGG + tig0025532:49862-49881 None:intergenic 45.0%
!!! CATTTCTGGCTAGCCCTTTT+AGG - tig0025532:49982-50001 Msa1423390:five_prime_UTR 45.0%
!!! GCTAGCCCTTTTAGGTTGTT+GGG - tig0025532:49990-50009 Msa1423390:five_prime_UTR 45.0%
!! CTTATGTTGTTGGGTTGGGA+GGG + tig0025532:50067-50086 None:intergenic 45.0%
!! TCTTATGTTGTTGGGTTGGG+AGG + tig0025532:50068-50087 None:intergenic 45.0%
GAGCTCTTATGTTGTTGGGT+TGG + tig0025532:50072-50091 None:intergenic 45.0%
AGCTCATTAAAGCGACCACA+GGG - tig0025532:50087-50106 Msa1423390:five_prime_UTR 45.0%
TAGAGGATGAAGGTCGTGTT+TGG - tig0025532:50179-50198 Msa1423390:intron 45.0%
TGTTGGAGGATCCTTTGATG+TGG - tig0025532:50402-50421 Msa1423390:five_prime_UTR 45.0%
GAATTGAACTCAACCCAACG+TGG - tig0025532:50689-50708 Msa1423390:intron 45.0%
GGCAACTCTGTTGAAGTAAG+TGG - tig0025532:50862-50881 Msa1423390:intron 45.0%
GAAGTTGTGCATACATCTGG+CGG - tig0025532:51140-51159 Msa1423390:intron 45.0%
TGTGTCGAAGACACTGGAAT+TGG - tig0025532:51329-51348 Msa1423390:five_prime_UTR 45.0%
TTTATAAGCCGGCCACAGAT+TGG - tig0025532:51491-51510 Msa1423390:five_prime_UTR 45.0%
! TAGAGGGTTTAAAGCCGTTG+TGG - tig0025532:51610-51629 Msa1423390:five_prime_UTR 45.0%
AGGTTTCCCATCAACCACAA+CGG + tig0025532:51627-51646 None:intergenic 45.0%
AGTCGCAAACGCCATCAATA+AGG - tig0025532:51700-51719 Msa1423390:five_prime_UTR 45.0%
AAAAATGGTGCTTCCAGCAC+AGG - tig0025532:51740-51759 Msa1423390:five_prime_UTR 45.0%
AAAATGGTGCTTCCAGCACA+GGG - tig0025532:51741-51760 Msa1423390:five_prime_UTR 45.0%
AGATTCATGGGTTTGTGGAG+AGG - tig0025532:52053-52072 Msa1423390:five_prime_UTR 45.0%
GTAGCAAGAAGGATCATTCG+AGG + tig0025532:52133-52152 None:intergenic 45.0%
GAAGCCACTGAGAACTAGTA+TGG - tig0025532:52216-52235 Msa1423390:intron 45.0%
CCACTGAGAACTAGTATGGT+GGG - tig0025532:52220-52239 Msa1423390:intron 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG - tig0025532:52243-52262 Msa1423390:intron 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG - tig0025532:52244-52263 Msa1423390:intron 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG + tig0025532:52252-52271 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG - tig0025532:52250-52269 Msa1423390:intron 45.0%
! TCAGTTTGAAGCCTTCTGTG+CGG - tig0025532:52316-52335 Msa1423390:intron 45.0%
ATGTCAATGGAAGTGACTGC+AGG - tig0025532:52359-52378 Msa1423390:intron 45.0%
GCAGGTGCCTTGAAAAACTT+TGG - tig0025532:52377-52396 Msa1423390:intron 45.0%
TAGCCAACATGCAAGTTACG+TGG + tig0025532:52674-52693 None:intergenic 45.0%
TGAAGCAACTCGTCGAATTC+GGG - tig0025532:52893-52912 Msa1423390:five_prime_UTR 45.0%
TCTGCTGTCATGGCCAATAT+AGG + tig0025532:52987-53006 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG + tig0025532:53575-53594 None:intergenic 45.0%
! CTTTTGCAGAATATGCGGCT+AGG - tig0025532:53601-53620 Msa1423390:intron 45.0%
GTTTGAGAAGCAGCATAGAG+TGG - tig0025532:49712-49731 Msa1423390:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG - tig0025532:49745-49764 Msa1423390:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG - tig0025532:49750-49769 Msa1423390:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG - tig0025532:49751-49770 Msa1423390:five_prime_UTR 45.0%
! TGCACCGGTCATATTTGCTT+AGG - tig0025532:53764-53783 Msa1423390:intron 45.0%
AACATACTGAGAGCTCCTAC+TGG - tig0025532:53932-53951 Msa1423390:intron 45.0%
ACATACTGAGAGCTCCTACT+GGG - tig0025532:53933-53952 Msa1423390:intron 45.0%
!! TTGTTCCGACTAGCCCTTTT+AGG - tig0025532:53960-53979 Msa1423390:intron 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG - tig0025532:53967-53986 Msa1423390:intron 45.0%
AGCTCTTCTGTTGTTGGGTT+GGG + tig0025532:54049-54068 None:intergenic 45.0%
GAGCTCATTAAAGTGACTGC+AGG - tig0025532:54064-54083 Msa1423390:five_prime_UTR 45.0%
GAAGACAATGCAAACTGCAG+GGG + tig0025532:54395-54414 None:intergenic 45.0%
GAGAAGACAATGCAAACTGC+AGG + tig0025532:54397-54416 None:intergenic 45.0%
TGTCAGGGAAACATTGCTGA+AGG - tig0025532:54505-54524 Msa1423390:intron 45.0%
ATGTGCTAAACTCCGCATTC+TGG + tig0025532:54557-54576 None:intergenic 45.0%
ATGCGGAGTTTAGCACATAC+GGG - tig0025532:54559-54578 Msa1423390:intron 45.0%
GCTTCTACGGGTAATGTTGT+GGG - tig0025532:54587-54606 Msa1423390:intron 45.0%
CTTCTACGGGTAATGTTGTG+GGG - tig0025532:54588-54607 Msa1423390:intron 45.0%
! GCATGACGACTTGGATTTCA+TGG - tig0025532:54610-54629 Msa1423390:intron 45.0%
AAAACCCCAATGCCGATCAT+TGG - tig0025532:55026-55045 Msa1423390:five_prime_UTR 45.0%
CGAGCTTCAGATTGGAAGAG+CGG + tig0025532:44751-44770 None:intergenic 50.0%
CTTAGGCCACTTGTCGAATC+TGG + tig0025532:45386-45405 None:intergenic 50.0%
ATGCGATGGCGAAAGGATGA+CGG - tig0025532:47212-47231 Msa1423390:intron 50.0%
! ACGGATGGTGTTGAAGTTGG+CGG - tig0025532:47231-47250 Msa1423390:intron 50.0%
AGGGCCATTGTTGAAGTTGG+TGG - tig0025532:47342-47361 Msa1423390:CDS 50.0%
!! GCCATTGTTGAAGTTGGTGG+CGG - tig0025532:47345-47364 Msa1423390:CDS 50.0%
ACCGCCACCAACTTCAACAA+TGG + tig0025532:47349-47368 None:intergenic 50.0%
!! ATTGTTGAAGTTGGTGGCGG+TGG - tig0025532:47348-47367 Msa1423390:CDS 50.0%
! AATGAGGCTGTAGATGGTGG+TGG - tig0025532:47372-47391 Msa1423390:exon 50.0%
! GATGGTGTAATAGGTGGTGG+TGG - tig0025532:47474-47493 Msa1423390:five_prime_UTR 50.0%
! TGGTGTAATAGGTGGTGGTG+GGG - tig0025532:47476-47495 Msa1423390:five_prime_UTR 50.0%
!! TAATAGGTGGTGGTGGGGAA+AGG - tig0025532:47481-47500 Msa1423390:five_prime_UTR 50.0%
! AATGAGGCTGTAGATGGTGG+TGG - tig0025532:47372-47391 Msa1423390:exon 50.0%
!! TGGTGGTGGAGAAATGAGGA+TGG - tig0025532:47566-47585 Msa1423390:five_prime_UTR 50.0%
GGTGGAGAAATGAGGATGGA+TGG - tig0025532:47570-47589 Msa1423390:five_prime_UTR 50.0%
AGGACCGATGGAGTTGTAGA+TGG - tig0025532:47642-47661 Msa1423390:five_prime_UTR 50.0%
ACCGATGGAGTTGTAGATGG+TGG - tig0025532:47645-47664 Msa1423390:five_prime_UTR 50.0%
! GATGGAGTTGTAGATGGTGG+TGG - tig0025532:47648-47667 Msa1423390:five_prime_UTR 50.0%
!! TTGTAGATGGTGGTGGCGAA+AGG - tig0025532:47655-47674 Msa1423390:five_prime_UTR 50.0%
AGGGCAATGGATGAAGTTGG+TGG - tig0025532:47696-47715 Msa1423390:five_prime_UTR 50.0%
!! ATGGATGAAGTTGGTGGCGA+TGG - tig0025532:47702-47721 Msa1423390:five_prime_UTR 50.0%
GTTGGCGATGGAGATGTACA+TGG - tig0025532:47738-47757 Msa1423390:intron 50.0%
GGAGATGTACATGGTGGTTG+TGG - tig0025532:47747-47766 Msa1423390:intron 50.0%
! AAGTGTCGTGTCAGACACAC+CGG - tig0025532:47874-47893 Msa1423390:intron 50.0%
TATGAAGCACGGACACTCCT+CGG + tig0025532:47912-47931 None:intergenic 50.0%
! GATTTAGCGGAGGCTTTGTG+CGG + tig0025532:48144-48163 None:intergenic 50.0%
CGAGGACATCACGGATTTAG+CGG + tig0025532:48157-48176 None:intergenic 50.0%
!!! CAAAGACTGGTTTTGCGCCT+AGG - tig0025532:48547-48566 Msa1423390:five_prime_UTR 50.0%
GCAAAATCAGCACCACCCTT+TGG - tig0025532:49191-49210 Msa1423390:intron 50.0%
!! GGAACTTTGAAGCCAAAGGG+TGG + tig0025532:49206-49225 None:intergenic 50.0%
GGATGGCTAGAGCATGAACA+TGG + tig0025532:49446-49465 None:intergenic 50.0%
GCAGAAGGGTTTCTGTAGGA+TGG + tig0025532:49463-49482 None:intergenic 50.0%
AAACCCTTCTGCCATTGACC+AGG - tig0025532:49471-49490 Msa1423390:intron 50.0%
CAAACCTGGTCAATGGCAGA+AGG + tig0025532:49478-49497 None:intergenic 50.0%
AGCGGTCCTAGCCGTATATT+CGG + tig0025532:49630-49649 None:intergenic 50.0%
TGCACCTGTCACATTTGCTC+AGG - tig0025532:49781-49800 Msa1423390:five_prime_UTR 50.0%
!!! GGCTAGCCCTTTTAGGTTGT+TGG - tig0025532:49989-50008 Msa1423390:five_prime_UTR 50.0%
GAGCTCATTAAAGCGACCAC+AGG - tig0025532:50086-50105 Msa1423390:five_prime_UTR 50.0%
CACAAGGGACTCCACATCAA+AGG + tig0025532:50416-50435 None:intergenic 50.0%
CTTTGATGTGGAGTCCCTTG+TGG - tig0025532:50414-50433 Msa1423390:five_prime_UTR 50.0%
AGTCTGAGCATAGCCACGTT+GGG + tig0025532:50705-50724 None:intergenic 50.0%
TCTTCGACACAGACCCATCT+AGG + tig0025532:51320-51339 None:intergenic 50.0%
!! AACTATGGTGGTACCGGCAT+TGG - tig0025532:51419-51438 Msa1423390:five_prime_UTR 50.0%
TGCCTAGCTGAACTAATGGG+CGG - tig0025532:51458-51477 Msa1423390:five_prime_UTR 50.0%
AGGTACTTCCAATCTGTGGC+CGG + tig0025532:51502-51521 None:intergenic 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG + tig0025532:51647-51666 None:intergenic 50.0%
TCATGGGTTTGTGGAGAGGA+CGG - tig0025532:52057-52076 Msa1423390:five_prime_UTR 50.0%
TGCGGCAACTGGAAACAGAA+CGG - tig0025532:52091-52110 Msa1423390:five_prime_UTR 50.0%
GCCACTGAGAACTAGTATGG+TGG - tig0025532:52219-52238 Msa1423390:intron 50.0%
! CCCACCATACTAGTTCTCAG+TGG + tig0025532:52223-52242 None:intergenic 50.0%
AACAGGCAAGAAGAGACAGC+CGG - tig0025532:52267-52286 Msa1423390:intron 50.0%
! CCATCAGGCATCTCTTTTCC+CGG + tig0025532:52289-52308 None:intergenic 50.0%
GATGTGAAGTGTGCAGACAG+CGG - tig0025532:52404-52423 Msa1423390:intron 50.0%
AACTCGTCGAATTCGGGAGA+TGG - tig0025532:52899-52918 Msa1423390:five_prime_UTR 50.0%
AATTCGGGAGATGGAGAGGA+CGG - tig0025532:52908-52927 Msa1423390:five_prime_UTR 50.0%
GCAAAATCAGCACCACCCTT+TGG - tig0025532:49191-49210 Msa1423390:intron 50.0%
GGTTAGGGATGAGTATGCAC+CGG - tig0025532:49766-49785 Msa1423390:five_prime_UTR 50.0%
GTCGGAACAAACTTCCCAGT+AGG + tig0025532:53950-53969 None:intergenic 50.0%
!! CTTCTGTTGTTGGGTTGGGA+GGG + tig0025532:54045-54064 None:intergenic 50.0%
!! TCTTCTGTTGTTGGGTTGGG+AGG + tig0025532:54046-54065 None:intergenic 50.0%
GAGCTCTTCTGTTGTTGGGT+TGG + tig0025532:54050-54069 None:intergenic 50.0%
TGCGGAGTTTAGCACATACG+GGG - tig0025532:54560-54579 Msa1423390:intron 50.0%
AGTTTAGCACATACGGGGAC+TGG - tig0025532:54565-54584 Msa1423390:intron 50.0%
GGCTTCTACGGGTAATGTTG+TGG - tig0025532:54586-54605 Msa1423390:intron 50.0%
ATCTAGACTCCGACACGTTC+CGG - tig0025532:54642-54661 Msa1423390:intron 50.0%
!! AACTTTCAGGTTGGGTCTGC+CGG + tig0025532:54664-54683 None:intergenic 50.0%
ACTATTGCTGCTGTGCTCGT+TGG - tig0025532:54762-54781 Msa1423390:intron 50.0%
GAGTTCGATGCGATGGCGAA+AGG - tig0025532:47205-47224 Msa1423390:intron 55.0%
!! GATGGCGAAAGGATGACGGA+TGG - tig0025532:47216-47235 Msa1423390:intron 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0025532:47234-47253 Msa1423390:intron 55.0%
!! TAGTAGGTGGTGGTGGGGAA+AGG - tig0025532:47301-47320 Msa1423390:CDS 55.0%
GGTGGCAATGAGGCTGTAGA+TGG - tig0025532:47366-47385 Msa1423390:CDS 55.0%
GGCAATGAGGCTGTAGATGG+TGG - tig0025532:47369-47388 Msa1423390:exon 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0025532:47234-47253 Msa1423390:intron 55.0%
AGGGCCATGGTTGAAGTTGG+TGG - tig0025532:47522-47541 Msa1423390:five_prime_UTR 55.0%
!! GCCATGGTTGAAGTTGGTGG+CGG - tig0025532:47525-47544 Msa1423390:five_prime_UTR 55.0%
ACCGCCACCAACTTCAACCA+TGG + tig0025532:47529-47548 None:intergenic 55.0%
!! ATGGTTGAAGTTGGTGGCGG+TGG - tig0025532:47528-47547 Msa1423390:five_prime_UTR 55.0%
GGTGGCAATGAGGCTGTAGA+TGG - tig0025532:47366-47385 Msa1423390:CDS 55.0%
GGCAATGAGGCTGTAGATGG+TGG - tig0025532:47369-47388 Msa1423390:exon 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0025532:47234-47253 Msa1423390:intron 55.0%
!! ATGGTGGTGGCGAAAGGAGA+AGG - tig0025532:47661-47680 Msa1423390:five_prime_UTR 55.0%
!! GATGAAGTTGGTGGCGATGG+CGG - tig0025532:47705-47724 Msa1423390:five_prime_UTR 55.0%
GGCGATGGAGATGTACATGG+TGG - tig0025532:47741-47760 Msa1423390:intron 55.0%
AGTGTCGTGTCAGACACACC+GGG - tig0025532:47875-47894 Msa1423390:intron 55.0%
GTGACGGCCACACCTGATAT+AGG - tig0025532:48112-48131 Msa1423390:five_prime_UTR 55.0%
GGACATCACGGATTTAGCGG+AGG + tig0025532:48154-48173 None:intergenic 55.0%
CCATTGCGACGAGGACATCA+CGG + tig0025532:48166-48185 None:intergenic 55.0%
TGATGTCCTCGTCGCAATGG+CGG - tig0025532:48166-48185 Msa1423390:five_prime_UTR 55.0%
GGCTGTTGAGAGAAGGGAGA+AGG - tig0025532:48621-48640 Msa1423390:five_prime_UTR 55.0%
TGTGCATAGGCCACTCCACT+CGG + tig0025532:49668-49687 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG - tig0025532:50010-50029 Msa1423390:five_prime_UTR 55.0%
CAGTCTGAGCATAGCCACGT+TGG + tig0025532:50706-50725 None:intergenic 55.0%
CTCAGACTGCTCAAGCGTGT+GGG - tig0025532:50717-50736 Msa1423390:intron 55.0%
TGGGTCTGTGTCGAAGACAC+TGG - tig0025532:51323-51342 Msa1423390:five_prime_UTR 55.0%
GACCGCCCATTAGTTCAGCT+AGG + tig0025532:51463-51482 None:intergenic 55.0%
CATGGGTTTGTGGAGAGGAC+GGG - tig0025532:52058-52077 Msa1423390:five_prime_UTR 55.0%
AGGACGGGATCTTCAGTGTG+CGG - tig0025532:52073-52092 Msa1423390:five_prime_UTR 55.0%
GATCTTCAGTGTGCGGCAAC+TGG - tig0025532:52080-52099 Msa1423390:five_prime_UTR 55.0%
ACAGGCAAGAAGAGACAGCC+GGG - tig0025532:52268-52287 Msa1423390:intron 55.0%
CCGGGAAAAGAGATGCCTGA+TGG - tig0025532:52286-52305 Msa1423390:intron 55.0%
GTCGAATTCGGGAGATGGAG+AGG - tig0025532:52904-52923 Msa1423390:five_prime_UTR 55.0%
ACGGCGAATGAGGAGACGAA+TGG - tig0025532:52927-52946 Msa1423390:five_prime_UTR 55.0%
TGTGCATAGGCCACTCCACT+CGG + tig0025532:49668-49687 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG - tig0025532:50010-50029 Msa1423390:five_prime_UTR 55.0%
!! CATACGGGGACTGGCTTCTA+CGG - tig0025532:54574-54593 Msa1423390:intron 55.0%
!! ATACGGGGACTGGCTTCTAC+GGG - tig0025532:54575-54594 Msa1423390:intron 55.0%
TGTTGTGGGGCATGACGACT+TGG - tig0025532:54601-54620 Msa1423390:intron 55.0%
GGCAGACCCAACCTGAAAGT+TGG - tig0025532:54663-54682 Msa1423390:intron 55.0%
!!! GCTGTGCTCGTTGGCTCTTT+TGG - tig0025532:54771-54790 Msa1423390:intron 55.0%
GTTGAAGTTGGCGGTGGCAC+CGG - tig0025532:47240-47259 Msa1423390:CDS 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG - tig0025532:47265-47284 Msa1423390:CDS 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG - tig0025532:47268-47287 Msa1423390:CDS 60.0%
!! GTGGTGGTGGGGAAAGGAGA+AGG - tig0025532:47307-47326 Msa1423390:CDS 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG - tig0025532:47356-47375 Msa1423390:CDS 60.0%
! GGTGTTGAAGTTGGCGGTGG+CGG - tig0025532:47237-47256 Msa1423390:intron 60.0%
! ACCAGAGCTGAAGGTGGTGG+TGG - tig0025532:47438-47457 Msa1423390:five_prime_UTR 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG - tig0025532:47265-47284 Msa1423390:CDS 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG - tig0025532:47268-47287 Msa1423390:CDS 60.0%
GGTGGCGAAAGGAGGACAGA+TGG - tig0025532:47456-47475 Msa1423390:five_prime_UTR 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG - tig0025532:47356-47375 Msa1423390:CDS 60.0%
GTTGAAGTTGGCGGTGGCAC+CGG - tig0025532:47240-47259 Msa1423390:CDS 60.0%
!! CTGAAGGTGGTGGAGGGGAA+AGG - tig0025532:47619-47638 Msa1423390:five_prime_UTR 60.0%
!! AAGGTGGTGGAGGGGAAAGG+AGG - tig0025532:47622-47641 Msa1423390:five_prime_UTR 60.0%
! ACGGACACTCCTCGGATTGG+GGG + tig0025532:47904-47923 None:intergenic 60.0%
CACGGACACTCCTCGGATTG+GGG + tig0025532:47905-47924 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+GGG + tig0025532:47906-47925 None:intergenic 60.0%
AGCACGGACACTCCTCGGAT+TGG + tig0025532:47907-47926 None:intergenic 60.0%
CCGTGATGTCCTCGTCGCAA+TGG - tig0025532:48163-48182 Msa1423390:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG - tig0025532:49636-49655 Msa1423390:intron 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG + tig0025532:49648-49667 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG - tig0025532:49650-49669 Msa1423390:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG + tig0025532:49662-49681 None:intergenic 60.0%
GCTCAGACTGCTCAAGCGTG+TGG - tig0025532:50716-50735 Msa1423390:intron 60.0%
GACTGCTCAAGCGTGTGGGA+AGG - tig0025532:50721-50740 Msa1423390:intron 60.0%
GATGGAGAGGACGGCGAATG+AGG - tig0025532:52917-52936 Msa1423390:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG - tig0025532:49636-49655 Msa1423390:intron 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG + tig0025532:49648-49667 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG - tig0025532:49650-49669 Msa1423390:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG + tig0025532:49662-49681 None:intergenic 60.0%
TTGGGTCTGCCGGAACGTGT+CGG + tig0025532:54654-54673 None:intergenic 60.0%
! ACCGGAGCTGAAGGTGGTGG+TGG - tig0025532:47258-47277 Msa1423390:CDS 65.0%
GCCACCACCACCTTCAGCTC+CGG + tig0025532:47262-47281 None:intergenic 65.0%
! GTTGAAGTTGGCGGTGGCGG+TGG - tig0025532:47414-47433 Msa1423390:five_prime_UTR 65.0%
GGTGGCACCAGAGCTGAAGG+TGG - tig0025532:47432-47451 Msa1423390:five_prime_UTR 65.0%
GGCACCAGAGCTGAAGGTGG+TGG - tig0025532:47435-47454 Msa1423390:five_prime_UTR 65.0%
GCCACCACCACCTTCAGCTC+TGG + tig0025532:47262-47281 None:intergenic 65.0%
! ACCGGAGCTGAAGGTGGTGG+AGG - tig0025532:47258-47277 Msa1423390:CDS 65.0%
CCCTCCACCACCTTCAGCTC+CGG + tig0025532:47616-47635 None:intergenic 65.0%
!! CCGGAGCTGAAGGTGGTGGA+GGG - tig0025532:47613-47632 Msa1423390:five_prime_UTR 65.0%
!! CGGAGCTGAAGGTGGTGGAG+GGG - tig0025532:47614-47633 Msa1423390:five_prime_UTR 65.0%
GGAGGGGAAAGGAGGACCGA+TGG - tig0025532:47630-47649 Msa1423390:five_prime_UTR 65.0%
!! GTTGGTGGCGATGGCGGTTG+CGG - tig0025532:47711-47730 Msa1423390:intron 65.0%
! GATGGCGGTTGCGGTGGTGT+TGG - tig0025532:47720-47739 Msa1423390:intron 65.0%
!! GGTTGCGGTGGTGTTGGCGA+TGG - tig0025532:47726-47745 Msa1423390:intron 65.0%
!! TCCTCGGATTGGGGGTGTCC+CGG + tig0025532:47896-47915 None:intergenic 65.0%
CCTCGTCGCAATGGCGGTTC+CGG - tig0025532:48172-48191 Msa1423390:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG - tig0025532:49655-49674 Msa1423390:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG - tig0025532:49655-49674 Msa1423390:five_prime_UTR 65.0%
! GGTGGCACCGGAGCTGAAGG+TGG - tig0025532:47252-47271 Msa1423390:CDS 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG - tig0025532:47255-47274 Msa1423390:CDS 70.0%
GGCGGTGGCACCAGAGCTGA+AGG - tig0025532:47429-47448 Msa1423390:five_prime_UTR 70.0%
! GGTGGCACCGGAGCTGAAGG+TGG - tig0025532:47252-47271 Msa1423390:CDS 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG - tig0025532:47255-47274 Msa1423390:CDS 70.0%
ACCGGGACACCCCCAATCCG+AGG - tig0025532:47892-47911 Msa1423390:intron 70.0%
CCGGAACCGCCATTGCGACG+AGG + tig0025532:48175-48194 None:intergenic 70.0%
! GGCGGTGGCACCGGAGCTGA+AGG - tig0025532:47249-47268 Msa1423390:CDS 75.0%
! GGCGGTGGCACCGGAGCTGA+AGG - tig0025532:47249-47268 Msa1423390:CDS 75.0%
! GGTGGCGATGGCGGTTGCGG+TGG - tig0025532:47714-47733 Msa1423390:intron 75.0%
Chromosome Type Strat End Strand Name
tig0025532 gene 44674 55072 44674 ID=Msa1423390;Name=Msa1423390
tig0025532 mRNA 44674 55072 44674 ID=Msa1423390-mRNA-1;Parent=Msa1423390;Name=Msa1423390-mRNA-1;_AED=0.11;_eAED=0.12;_QI=4341|0.8|0.87|1|0.26|0.25|16|472|271
tig0025532 exon 44674 45235 44674 ID=Msa1423390-mRNA-1:exon:3205;Parent=Msa1423390-mRNA-1
tig0025532 exon 45671 45826 45671 ID=Msa1423390-mRNA-1:exon:3204;Parent=Msa1423390-mRNA-1
tig0025532 exon 45976 46194 45976 ID=Msa1423390-mRNA-1:exon:3203;Parent=Msa1423390-mRNA-1
tig0025532 exon 46655 46856 46655 ID=Msa1423390-mRNA-1:exon:3202;Parent=Msa1423390-mRNA-1
tig0025532 exon 47239 47726 47239 ID=Msa1423390-mRNA-1:exon:3201;Parent=Msa1423390-mRNA-1
tig0025532 exon 47984 48708 47984 ID=Msa1423390-mRNA-1:exon:3200;Parent=Msa1423390-mRNA-1
tig0025532 exon 48870 49082 48870 ID=Msa1423390-mRNA-1:exon:3199;Parent=Msa1423390-mRNA-1
tig0025532 exon 49219 49347 49219 ID=Msa1423390-mRNA-1:exon:3198;Parent=Msa1423390-mRNA-1
tig0025532 exon 49638 49807 49638 ID=Msa1423390-mRNA-1:exon:3197;Parent=Msa1423390-mRNA-1
tig0025532 exon 49900 50129 49900 ID=Msa1423390-mRNA-1:exon:3196;Parent=Msa1423390-mRNA-1
tig0025532 exon 50254 50592 50254 ID=Msa1423390-mRNA-1:exon:3195;Parent=Msa1423390-mRNA-1
tig0025532 exon 51257 51764 51257 ID=Msa1423390-mRNA-1:exon:3194;Parent=Msa1423390-mRNA-1
tig0025532 exon 51936 52121 51936 ID=Msa1423390-mRNA-1:exon:3193;Parent=Msa1423390-mRNA-1
tig0025532 exon 52476 53359 52476 ID=Msa1423390-mRNA-1:exon:3192;Parent=Msa1423390-mRNA-1
tig0025532 exon 54018 54388 54018 ID=Msa1423390-mRNA-1:exon:3191;Parent=Msa1423390-mRNA-1
tig0025532 exon 54826 55072 54826 ID=Msa1423390-mRNA-1:exon:3190;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 54826 55072 54826 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 54018 54388 54018 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 52476 53359 52476 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 51936 52121 51936 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 51257 51764 51257 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 50254 50592 50254 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 49900 50129 49900 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 49638 49807 49638 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 49219 49347 49219 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 48870 49082 48870 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 47984 48708 47984 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 five_prime_UTR 47388 47726 47388 ID=Msa1423390-mRNA-1:five_prime_utr;Parent=Msa1423390-mRNA-1
tig0025532 CDS 47239 47387 47239 ID=Msa1423390-mRNA-1:cds;Parent=Msa1423390-mRNA-1
tig0025532 CDS 46655 46856 46655 ID=Msa1423390-mRNA-1:cds;Parent=Msa1423390-mRNA-1
tig0025532 CDS 45976 46194 45976 ID=Msa1423390-mRNA-1:cds;Parent=Msa1423390-mRNA-1
tig0025532 CDS 45671 45826 45671 ID=Msa1423390-mRNA-1:cds;Parent=Msa1423390-mRNA-1
tig0025532 CDS 45146 45235 45146 ID=Msa1423390-mRNA-1:cds;Parent=Msa1423390-mRNA-1
tig0025532 three_prime_UTR 44674 45145 44674 ID=Msa1423390-mRNA-1:three_prime_utr;Parent=Msa1423390-mRNA-1
Gene Sequence

>Msa1423390

ATGTCAATGGAAGTGACTGCAGGTGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCAGACAGCGGCAAAGCTGCTCTTGAAATGCTTCTATTCCCTCACAAGTTTGATGCTTGCTTCAAGGATATTCAAATGCAAGAAAAGGACGGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACGGCGAATGAGGAGACGAATGGTGAATGTAGTGAAAGGAAAAGTAAATTCCGTTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGGAATTGTTCAGATGAAGATGCAAAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAAACTTTTGCAGAATATGCGGCTAGGACCGCTTTCGAAAGGCCGCTACCGAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCGGTTTGAGAAGCAGCATAGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACAGGTTAGGGATGAGTATGCACCGGATGACCGAGAAAACATACTGAGAGCTCCTACTGGGAAGTTTGTTCCGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATTTAAGCTCCCTCCCAACCCAACAACAGAAGAGCTCATTAAAGGAAACATTGCTGAAGGTGCACTTTTAACCGACTTTTTGATGGCCAGAATGCGGAGTTTAGCACATACGGGGACTGGCTTCTACGGGTAA
Protein sequence

>Msa1423390

MSMEVTAGALKNFGADVKCADSGKAALEMLLFPHKFDACFKDIQMQEKDGFEATRRIREMERTANEETNGECSERKSKFRLPILAMTADVIHATYEECLKCGMDGYVSKPFEEGIVQMKMQNQHHPLASKLQETFAEYAARTAFERPLPSGVAYAQRVVNSERERFEKQHRVVIKTMEREASQVRDEYAPDDRENILRAPTGKFVPTSPFRLLGSHHLGVVLTFPVYKFKLPPNPTTEELIKGNIAEGALLTDFLMARMRSLAHTGTGFYG*