AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0411190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411190 MtrunA17_Chr3g0102341 87.786 786 40 6 1 732 1 784 0.0 1021
Msa0411190 MtrunA17_Chr5g0446481 43.086 687 279 17 1 594 1 668 1.60e-94 315
Msa0411190 MtrunA17_Chr5g0446481 57.529 259 102 6 476 732 700 952 5.87e-54 201
Msa0411190 MtrunA17_Chr3g0132011 35.012 417 205 10 355 724 91 488 2.14e-46 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411190 AT4G26630.2 46.169 522 194 15 275 732 236 734 1.18e-93 309
Msa0411190 AT4G26630.1 46.169 522 194 15 275 732 236 734 1.18e-93 309
Msa0411190 AT5G55660.1 46.593 455 181 11 330 731 297 742 4.44e-85 286
Msa0411190 AT3G48710.1 32.697 419 196 10 355 724 53 434 2.09e-42 160
Msa0411190 AT5G63550.1 41.885 191 69 3 357 507 95 283 1.69e-33 136
Msa0411190 AT5G63550.2 41.667 192 69 4 357 507 95 284 3.93e-32 132
Msa0411190 AT1G64253.3 58.182 55 23 0 675 729 130 184 8.78e-12 65.1
Msa0411190 AT1G64253.2 58.182 55 23 0 675 729 262 316 4.18e-11 65.5
Msa0411190 AT1G64253.1 58.182 55 23 0 675 729 338 392 6.07e-11 65.5

Find 200 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCATCCTCTTCCATTTCT+TGG 0.132393 3_2:-53337685 None:intergenic
CTTTGAAGTTGACACCTTTC+TGG 0.145473 3_2:+53345106 Msa0411190:three_prime_UTR
AGGGAAGATAAGAGTGATTC+TGG 0.195751 3_2:+53343027 Msa0411190:CDS
AGTAGAAAGCTTACAGATTC+AGG 0.236553 3_2:-53336170 None:intergenic
CGATCACTAGTTGGAGTCTT+TGG 0.269151 3_2:-53338118 None:intergenic
AAGCTTACAGATTCAGGATT+TGG 0.299852 3_2:-53336164 None:intergenic
GCATTTACCAGCTTTCTCTT+TGG 0.300814 3_2:-53343328 None:intergenic
TTGGTATTTGATGATTTCTT+AGG 0.302048 3_2:-53343186 None:intergenic
TTTCTTTGCAGATGATGTTT+TGG 0.306714 3_2:-53343088 None:intergenic
TAATCCTTTGCAGGCAGTTC+AGG 0.306825 3_2:+53340056 Msa0411190:intron
GATTTCTTAGGTGCTCTCTT+AGG 0.310357 3_2:-53343174 None:intergenic
CATAATTTAGTGCAGCCTTT+TGG 0.323313 3_2:+53344971 Msa0411190:three_prime_UTR
AAGGAAATCAGTTGAGAGAT+TGG 0.324108 3_2:+53338153 Msa0411190:CDS
ATTGATAATTTCTTATTGTT+AGG 0.334361 3_2:+53345133 Msa0411190:three_prime_UTR
GGAAGAAGTAAAAGATGATA+TGG 0.337785 3_2:+53337613 Msa0411190:CDS
GCTAGTACTTCAAGAGGTTC+TGG 0.338404 3_2:+53341199 Msa0411190:CDS
TGAATCTGAGAATGAGAAAA+TGG 0.338891 3_2:+53337718 Msa0411190:CDS
TTCTTCCTAGAAAATACCTT+TGG 0.355080 3_2:-53343240 None:intergenic
GAAGGAAGAGGGCGATGAAA+AGG 0.357929 3_2:+53337910 Msa0411190:CDS
TTGTTCCATACAATCCTCTT+TGG 0.361293 3_2:+53339804 Msa0411190:CDS
ACTATCATCAGTCTTCCTTC+TGG 0.367147 3_2:-53339775 None:intergenic
AGACCGGTCTTCATCTTTCT+CGG 0.371584 3_2:-53344770 None:intergenic
ACTGATTTCCTTTCTCGCAC+TGG 0.372574 3_2:-53338142 None:intergenic
GGAAGAAGTAAAAGAGGATA+AGG 0.387155 3_2:+53337541 Msa0411190:CDS
AGCTTTCTCTTTGGACTTTG+AGG 0.390801 3_2:-53343319 None:intergenic
AGCGTTCCGGTGAAATCATT+GGG 0.398650 3_2:+53337110 Msa0411190:CDS
ATCATCATCGGACTTTGGTT+TGG 0.407150 3_2:-53343205 None:intergenic
TTTGAAGTTGACACCTTTCT+GGG 0.408089 3_2:+53345107 Msa0411190:three_prime_UTR
TCCTTCCAAAGAGGATTGTA+TGG 0.410961 3_2:-53339809 None:intergenic
CTCCTCATTAACCTTCCCTC+TGG 0.412333 3_2:-53338056 None:intergenic
TGATGATGACATCCAAGAAA+TGG 0.412541 3_2:+53337673 Msa0411190:CDS
AGAGACGGAGGAGGAGGAGG+AGG 0.415078 3_2:+53337946 Msa0411190:CDS
GTTTGTTGTTCTCTTCAGAT+TGG 0.419185 3_2:-53344937 None:intergenic
ACAATCAACAGTCAGGCTTA+AGG 0.420468 3_2:-53344797 None:intergenic
GACTTTGAGGAAGACTTAGT+TGG 0.426096 3_2:-53343306 None:intergenic
CTATCTAAGCAAGATCAGTA+TGG 0.429412 3_2:+53337037 Msa0411190:exon
CTAAGCAGAAAAGGTTACTA+AGG 0.430405 3_2:+53343557 Msa0411190:intron
CTAGTTGGAGTCTTTGGCTC+TGG 0.431846 3_2:-53338112 None:intergenic
CTGATTTCCTTTCTCGCACT+GGG 0.433261 3_2:-53338141 None:intergenic
GGATGTTGATGCTGAGGTTA+AGG 0.436639 3_2:+53337739 Msa0411190:CDS
CCTTTCAATTTGCAGGGTCG+TGG 0.437186 3_2:+53338304 Msa0411190:intron
GAAGAAGATAAGAAAGTTGA+GGG 0.441554 3_2:+53337230 Msa0411190:CDS
AGGATAAGAAAGATGAAGAT+GGG 0.442056 3_2:+53337270 Msa0411190:CDS
AAAGAGGAGAAGAAAGATGA+TGG 0.445699 3_2:+53337515 Msa0411190:CDS
ATCCTCCTCTTCATCTTCCT+CGG 0.445829 3_2:-53344746 None:intergenic
ACCGACATTCTGAAACTACT+TGG 0.448158 3_2:+53343878 Msa0411190:CDS
TAGCGTTCCGGTGAAATCAT+TGG 0.451566 3_2:+53337109 Msa0411190:CDS
AAAGAGGATAAGGAAGTTGA+TGG 0.453853 3_2:+53337551 Msa0411190:CDS
AGCAGAGACGGAGGAGGAGG+AGG 0.454107 3_2:+53337943 Msa0411190:CDS
TTCAAATGGAGGTAGCGTTC+CGG 0.454980 3_2:+53337097 Msa0411190:CDS
TACAGAAGATAAAGAAGAAA+AGG 0.455304 3_2:+53337766 Msa0411190:CDS
CTTTGCAATGTGTAATTCCT+TGG 0.455309 3_2:-53338200 None:intergenic
GAAAACTGAAGTAGAGGAGA+AGG 0.456878 3_2:+53337844 Msa0411190:CDS
TGAAGCAGAGACGGAGGAGG+AGG 0.457761 3_2:+53337940 Msa0411190:CDS
TCAATATCATCATCGGACTT+TGG 0.461292 3_2:-53343210 None:intergenic
GAGGATAAGAAAGATGAAGA+TGG 0.461328 3_2:+53337269 Msa0411190:CDS
GAGGAAGACTTAGTTGGAGT+TGG 0.462737 3_2:-53343300 None:intergenic
GGGAAGATAAGAGTGATTCT+GGG 0.463928 3_2:+53343028 Msa0411190:CDS
AGATAAGGCAGAGGGTAGTA+AGG 0.465340 3_2:+53338009 Msa0411190:CDS
GAAAGTTGAGGGTGTGGAAA+AGG 0.466680 3_2:+53337241 Msa0411190:CDS
GTTGTTCTCTTCAGATTGGA+TGG 0.470961 3_2:-53344933 None:intergenic
TAAAGAAGTTGACTTCAATA+CGG 0.473503 3_2:+53343653 Msa0411190:CDS
AAAGAGGAGAAGAAAGATGA+AGG 0.475472 3_2:+53337479 Msa0411190:CDS
TTAGGTGCTCTCTTAGGTGG+TGG 0.477724 3_2:-53343168 None:intergenic
GAAAAGGTTACTAAGGGAAA+AGG 0.483043 3_2:+53343564 Msa0411190:intron
CGCACTGGGCGATCACTAGT+TGG 0.484606 3_2:-53338127 None:intergenic
GTGATCGCCCAGTGCGAGAA+AGG 0.487231 3_2:+53338134 Msa0411190:CDS
GTTTCATCATCAGATTTCTC+AGG 0.488834 3_2:-53342988 None:intergenic
TGTGGTGGAAGAAGTGAAAG+AGG 0.494879 3_2:+53337463 Msa0411190:CDS
AACTGATGGAGGGAAAGTCT+TGG 0.495923 3_2:+53337160 Msa0411190:CDS
GTTTCTAAGACTGATTCAAA+TGG 0.497991 3_2:+53337083 Msa0411190:CDS
CAATGTAGCTGAAGTAAAAG+AGG 0.499311 3_2:+53337394 Msa0411190:CDS
AGATAAGAAAGTTGAGGGTG+TGG 0.501886 3_2:+53337235 Msa0411190:CDS
AAGAGGAGAAGAAAGATGAT+GGG 0.505907 3_2:+53337516 Msa0411190:CDS
TTCTTAGGTGCTCTCTTAGG+TGG 0.507331 3_2:-53343171 None:intergenic
AGAGACAGAGGAGAAGGAAG+AGG 0.509912 3_2:+53337898 Msa0411190:CDS
GGAGAAGAAAGATGATGGGG+TGG 0.510926 3_2:+53337520 Msa0411190:CDS
AAGAGGAGAAGAAAGATGAA+GGG 0.512021 3_2:+53337480 Msa0411190:CDS
AGGTCAAGAGTAATATATTG+AGG 0.513587 3_2:+53340076 Msa0411190:CDS
AGGGGCTGATGAAGTAAAAG+AGG 0.517274 3_2:+53337499 Msa0411190:CDS
GGGAAAGTCTTGGAGAGTAA+TGG 0.519047 3_2:+53337170 Msa0411190:CDS
TAAATCAAAAGAAGAAGATA+AGG 0.520812 3_2:+53337994 Msa0411190:CDS
TGAAGAAGATAAGAAAGTTG+AGG 0.521925 3_2:+53337229 Msa0411190:CDS
CTGATCATCTGTGGGACTTG+AGG 0.524444 3_2:-53343604 None:intergenic
GTCTGCAAGTACCACAGTTG+TGG 0.524700 3_2:-53340999 None:intergenic
GGTGGAAAAGAAAGATAATG+AGG 0.524990 3_2:+53337589 Msa0411190:CDS
TTCAGCTAACAAATTTGATG+TGG 0.525782 3_2:+53344645 Msa0411190:intron
CTAATCCACAATCAACAGTC+AGG 0.527682 3_2:-53344804 None:intergenic
CACAGTTGTGGTTGCATGAG+GGG 0.528551 3_2:-53340987 None:intergenic
TGAGGAGAAAACTGAAGTAG+AGG 0.528696 3_2:+53337838 Msa0411190:CDS
TGATGTGGTAAAAGTAAAAG+AGG 0.530375 3_2:+53337427 Msa0411190:CDS
TAAGAAAGATGAAGATGGGG+TGG 0.530937 3_2:+53337274 Msa0411190:CDS
AGCATTGAGGAGAAAGAAGA+GGG 0.531988 3_2:+53337809 Msa0411190:CDS
GAAGTAGAGGAGAAGGAAGA+AGG 0.536555 3_2:+53337851 Msa0411190:CDS
TGATAGTGTGAAAGAAGCAG+TGG 0.537441 3_2:+53337640 Msa0411190:CDS
TGGGGTGGGAGAAGTAAAAG+AGG 0.537965 3_2:+53337289 Msa0411190:CDS
CCTTCCCTCTCCTTCCAAAG+AGG 0.541109 3_2:-53339818 None:intergenic
AAGAAAGACTTGGAAACTGA+TGG 0.541964 3_2:+53337146 Msa0411190:CDS
TCCATACAATCCTCTTTGGA+AGG 0.542692 3_2:+53339808 Msa0411190:CDS
GAGGGTAGTAAGGCTGAGAA+AGG 0.543123 3_2:+53338019 Msa0411190:CDS
TGGCAGCCAACCCAACCAAA+AGG 0.543954 3_2:-53344986 None:intergenic
CAGAAAGGTGTCAACTTCAA+AGG 0.544125 3_2:-53345105 None:intergenic
AAACGAGGTACACCAAGGTC+TGG 0.545991 3_2:+53341172 Msa0411190:CDS
AACTGAAGCAGAGACGGAGG+AGG 0.546642 3_2:+53337937 Msa0411190:CDS
TGTTGTTGAGAAGAAAGACT+TGG 0.548033 3_2:+53337136 Msa0411190:CDS
GGAGAAAACTGAAGCAGAGA+CGG 0.548254 3_2:+53337931 Msa0411190:CDS
GAGACAGAGGAGAAGGAAGA+GGG 0.548993 3_2:+53337899 Msa0411190:CDS
TTAAGCCTGACTGTTGATTG+TGG 0.549788 3_2:+53344799 Msa0411190:three_prime_UTR
TGAAGAAGAGACAGAGGAGA+AGG 0.551387 3_2:+53337892 Msa0411190:CDS
ACCAAGTAGTTTCAGAATGT+CGG 0.552078 3_2:-53343879 None:intergenic
GAGGTACACCAAGGTCTGGT+GGG 0.555694 3_2:+53341176 Msa0411190:CDS
AGAGGAGAAGAAAGATGAAG+GGG 0.555957 3_2:+53337481 Msa0411190:CDS
GAAAGAAGAGGGTAATGATG+AGG 0.555999 3_2:+53337820 Msa0411190:CDS
GTGGAAAAGAAAGATAATGA+GGG 0.556797 3_2:+53337590 Msa0411190:CDS
TGGGGTGGAAGAAGTAAAAG+AGG 0.558470 3_2:+53337535 Msa0411190:CDS
AAATGAAGATTCTTCAGGAG+TGG 0.559104 3_2:+53342879 Msa0411190:CDS
TTCCAGAGGGAAGGTTAATG+AGG 0.559631 3_2:+53338054 Msa0411190:CDS
GGATAAGAAAGACGATGTGG+TGG 0.559683 3_2:+53337448 Msa0411190:CDS
AAAAGAAGAAGATAAGGCAG+AGG 0.559965 3_2:+53338000 Msa0411190:CDS
TCAAAGTCCAAAGAGAAAGC+TGG 0.560527 3_2:+53343321 Msa0411190:CDS
ACTTTCATCAATATCATCAT+CGG 0.563049 3_2:-53343217 None:intergenic
TGACATCCAAGAAATGGAAG+AGG 0.563136 3_2:+53337679 Msa0411190:CDS
GTACTAGCCCCACCAGACCT+TGG 0.566752 3_2:-53341184 None:intergenic
CGAGGTACACCAAGGTCTGG+TGG 0.566882 3_2:+53341175 Msa0411190:CDS
TTCGATTGAACTGAGTGTGG+TGG 0.568671 3_2:+53336995 Msa0411190:five_prime_UTR
TTTCAGAATGTCGGTAAATG+TGG 0.569605 3_2:-53343870 None:intergenic
TGGAAAAGAAAGATAATGAG+GGG 0.570434 3_2:+53337591 Msa0411190:CDS
AGATGCAGAGGGTAGCATTG+AGG 0.571029 3_2:+53337796 Msa0411190:CDS
TGAGTCCGAGGAAGATGAAG+AGG 0.571197 3_2:+53344741 Msa0411190:CDS
TCTTCCCTTTCAGATTTCTG+TGG 0.571570 3_2:-53343012 None:intergenic
ACCACAGTTGTGGTTGCATG+AGG 0.573342 3_2:-53340989 None:intergenic
AAGAAAGATGAAGATGGGGT+GGG 0.575639 3_2:+53337275 Msa0411190:CDS
GAAAACTGAAGCAGAGACGG+AGG 0.576529 3_2:+53337934 Msa0411190:CDS
TAGTGTGAAAGAAGCAGTGG+AGG 0.578257 3_2:+53337643 Msa0411190:CDS
GGAAGAAGAAAAGTGAGCAA+GGG 0.579111 3_2:+53343256 Msa0411190:CDS
AGGAAGAAGAAAAGTGAGCA+AGG 0.579169 3_2:+53343255 Msa0411190:CDS
GTCCGAGGAAGATGAAGAGG+AGG 0.580746 3_2:+53344744 Msa0411190:CDS
TAGCATTGAGGAGAAAGAAG+AGG 0.581637 3_2:+53337808 Msa0411190:CDS
TCTAAGACTGATTCAAATGG+AGG 0.582420 3_2:+53337086 Msa0411190:CDS
ATGCCGAGAAAGATGAAGAC+CGG 0.582887 3_2:+53344767 Msa0411190:CDS
ACAATCCTCTTTGGAAGGAG+AGG 0.583278 3_2:+53339813 Msa0411190:CDS
AAGCAAGATCAGTATGGGTG+AGG 0.583972 3_2:+53337043 Msa0411190:exon
CAATCCTCTTTGGAAGGAGA+GGG 0.585119 3_2:+53339814 Msa0411190:CDS
AAAGAGGATAAGAAAGCCGA+TGG 0.586492 3_2:+53337305 Msa0411190:CDS
GGGTGTGGAAAAGGTACAAG+AGG 0.588552 3_2:+53337250 Msa0411190:CDS
TATCTAAGCAAGATCAGTAT+GGG 0.588642 3_2:+53337038 Msa0411190:exon
TGTGGTACTTGCAGACAAAG+AGG 0.589329 3_2:+53341006 Msa0411190:CDS
AACGCCACAGAAATCTGAAA+GGG 0.590074 3_2:+53343008 Msa0411190:CDS
GGATAAGAAAGATGAAGATG+GGG 0.592297 3_2:+53337271 Msa0411190:CDS
TCACGCAACTGATCATCTGT+GGG 0.592688 3_2:-53343612 None:intergenic
AGAGGAGAAGAAAGATGATG+GGG 0.593216 3_2:+53337517 Msa0411190:CDS
AATTATCAATAAGCCCAGAA+AGG 0.593248 3_2:-53345120 None:intergenic
CCACAGTTGTGGTTGCATGA+GGG 0.596193 3_2:-53340988 None:intergenic
GAAGAAGAAAAGTGAGCAAG+GGG 0.597718 3_2:+53343257 Msa0411190:CDS
GCTCATGATTCAGAAAGAGC+TGG 0.598185 3_2:+53344696 Msa0411190:CDS
TAAGCAGAAAAGGTTACTAA+GGG 0.598561 3_2:+53343558 Msa0411190:intron
TGAAGAAGCAGATGAGTCCG+AGG 0.600697 3_2:+53344729 Msa0411190:CDS
AAACGCCACAGAAATCTGAA+AGG 0.602760 3_2:+53343007 Msa0411190:CDS
TGACACAGAAGATGAATCAG+AGG 0.610205 3_2:+53342918 Msa0411190:CDS
TGATGGTGCAGATGAAGTAA+AGG 0.610805 3_2:+53337568 Msa0411190:CDS
GCGAGATTTATTTGTGACCG+TGG 0.612030 3_2:-53343142 None:intergenic
AAAGAAGAAGATAAGGCAGA+GGG 0.612875 3_2:+53338001 Msa0411190:CDS
AAGACTTGGAAACTGATGGA+GGG 0.613149 3_2:+53337150 Msa0411190:CDS
AGAGGATAAGAAAGATGATG+TGG 0.613532 3_2:+53337412 Msa0411190:CDS
GAAATCTGAAGAAGAGACAG+AGG 0.614258 3_2:+53337886 Msa0411190:CDS
ATCACGCAACTGATCATCTG+TGG 0.614796 3_2:-53343613 None:intergenic
TATGGGTGAGGAAGAAGTAG+TGG 0.616556 3_2:+53337055 Msa0411190:exon
TGGTGCAGATGAAGTAAAGG+TGG 0.616571 3_2:+53337571 Msa0411190:CDS
TGGCATTTAAGTTATCCAGA+AGG 0.625830 3_2:+53339760 Msa0411190:CDS
CAAGGAATTACACATTGCAA+AGG 0.625952 3_2:+53338201 Msa0411190:CDS
GTACACAATAAACTACATGC+TGG 0.627433 3_2:-53345006 None:intergenic
TCAGGCTTAAGGTTTAAGAC+CGG 0.629074 3_2:-53344786 None:intergenic
AGATATTATTGCTAAGCTGA+CGG 0.633751 3_2:+53340952 Msa0411190:CDS
AAGAGGATAAGAAAGCCGAT+GGG 0.641052 3_2:+53337306 Msa0411190:CDS
GGTGGGGCTAGTACTTCAAG+AGG 0.642776 3_2:+53341193 Msa0411190:CDS
AATCGATAAAGATGCAACCA+AGG 0.642945 3_2:+53338183 Msa0411190:CDS
GGAGAGTAATGGAGTCAAAG+AGG 0.646300 3_2:+53337181 Msa0411190:CDS
TCTGCAAAGAAAGAGTCCGC+CGG 0.646881 3_2:+53343099 Msa0411190:CDS
ATCAGTCAAGCAAGAAGCGT+AGG 0.648173 3_2:+53341140 Msa0411190:intron
AAAGACTTGGAAACTGATGG+AGG 0.652291 3_2:+53337149 Msa0411190:CDS
TACTTCAAGAGGTTCTGGAA+AGG 0.652399 3_2:+53341204 Msa0411190:CDS
AGTCAAGCAAGAAGCGTAGG+CGG 0.654264 3_2:+53341143 Msa0411190:intron
CCCTCATGCAACCACAACTG+TGG 0.656212 3_2:+53340988 Msa0411190:CDS
AAGAAGAAAAGTGAGCAAGG+GGG 0.662817 3_2:+53343258 Msa0411190:CDS
GACACAGAAGATGAATCAGA+GGG 0.663780 3_2:+53342919 Msa0411190:CDS
AGAGGATAAGAAAGCCGATG+GGG 0.663923 3_2:+53337307 Msa0411190:CDS
GAAAATGGATGTTGATGCTG+AGG 0.663965 3_2:+53337733 Msa0411190:CDS
CCTTTAAAAGATATACCCAA+TGG 0.668040 3_2:+53338331 Msa0411190:CDS
GCGTTCCGGTGAAATCATTG+GGG 0.668207 3_2:+53337111 Msa0411190:CDS
GGAAAAGAAAGATAATGAGG+GGG 0.671001 3_2:+53337592 Msa0411190:CDS
TGATATTGATGAAAGTCCAA+AGG 0.671560 3_2:+53343224 Msa0411190:CDS
CCTCTTTGGAAGGAGAGGGA+AGG 0.676579 3_2:+53339818 Msa0411190:CDS
AGAGGATAAGAAAGACGATG+TGG 0.678309 3_2:+53337445 Msa0411190:CDS
AGGTACACCAAGGTCTGGTG+GGG 0.685613 3_2:+53341177 Msa0411190:CDS
TTGTTCGATTGAACTGAGTG+TGG 0.687290 3_2:+53336992 Msa0411190:five_prime_UTR
CGTTCCGGTGAAATCATTGG+GGG 0.697927 3_2:+53337112 Msa0411190:CDS
GAGGATAAGAAAGCCGATGG+GGG 0.702206 3_2:+53337308 Msa0411190:CDS
CTGTAAAACGAGGTACACCA+AGG 0.706122 3_2:+53341167 Msa0411190:CDS
CGTAGGCGGACTGTAAAACG+AGG 0.731960 3_2:+53341157 Msa0411190:CDS
AAGCAAAACTGAGAAAACCA+CGG 0.741194 3_2:+53343125 Msa0411190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCCAAAAAAAAAAAAT+GGG - chr3_2:53336313-53336332 None:intergenic 10.0%
!! TAAATTCCAAAAAAAAAAAA+TGG - chr3_2:53336314-53336333 None:intergenic 10.0%
!!! TTTGTTTTATTTAGAATTTT+GGG + chr3_2:53336335-53336354 Msa0411190:intron 10.0%
!! ATAATAAAAATGCATAATTA+AGG - chr3_2:53338262-53338281 None:intergenic 10.0%
!!! TTTTGTTTTTTGTATTATTA+TGG + chr3_2:53339906-53339925 Msa0411190:intron 10.0%
!! CTGTAAAAAAAAAATATATT+AGG - chr3_2:53340322-53340341 None:intergenic 10.0%
!!! CTAATATATTTTTTTTTTAC+AGG + chr3_2:53340320-53340339 Msa0411190:intron 10.0%
!!! TGATATTTTAAAAATATTCA+CGG - chr3_2:53340630-53340649 None:intergenic 10.0%
!! ATATTATTTAAATTAAATGC+TGG - chr3_2:53342538-53342557 None:intergenic 10.0%
!! ATAAAATAAAATGTAATACA+AGG - chr3_2:53342751-53342770 None:intergenic 10.0%
!!! ACATTTTATTTTATTCAAAA+TGG + chr3_2:53342757-53342776 Msa0411190:intron 10.0%
!!! CATATTTATATTTTAACTAA+CGG - chr3_2:53343501-53343520 None:intergenic 10.0%
!!! AAAATCCCATTTTTTTTTTT+TGG + chr3_2:53336305-53336324 Msa0411190:intron 15.0%
!!! CTTTGTTTTATTTAGAATTT+TGG + chr3_2:53336334-53336353 Msa0411190:intron 15.0%
!!! AAATATTATGTTTTGAACTT+AGG + chr3_2:53336392-53336411 Msa0411190:intron 15.0%
!! AAATTAACATTAGTATCAAA+AGG + chr3_2:53338845-53338864 Msa0411190:intron 15.0%
!! TATTTCAAGATAATTTCTAT+TGG + chr3_2:53339424-53339443 Msa0411190:intron 15.0%
!!! TGGTATTCTAATATTTTAAT+CGG - chr3_2:53339523-53339542 None:intergenic 15.0%
!! ATTAAAATATTAGAATACCA+CGG + chr3_2:53339523-53339542 Msa0411190:intron 15.0%
!! AAAACAAAATCAAATCAATA+CGG - chr3_2:53339895-53339914 None:intergenic 15.0%
!!! TTTTATTTACCTTTGATATT+TGG + chr3_2:53339983-53340002 Msa0411190:intron 15.0%
!! TTTATTTACCTTTGATATTT+GGG + chr3_2:53339984-53340003 Msa0411190:intron 15.0%
!!! TATTATAGTTTGTAGTTTTT+GGG - chr3_2:53340143-53340162 None:intergenic 15.0%
!! AAAAAAAAAAGACAAAAAGT+CGG - chr3_2:53340259-53340278 None:intergenic 15.0%
!! TACTATTATATAAAGACAAA+TGG + chr3_2:53340575-53340594 Msa0411190:intron 15.0%
!! TACATAATTAAAGATATCAA+AGG + chr3_2:53340671-53340690 Msa0411190:intron 15.0%
!!! AAATACTAATTTTTATTTGG+TGG - chr3_2:53341987-53342006 None:intergenic 15.0%
!! ACCAAATAAAAATTAGTATT+TGG + chr3_2:53341986-53342005 Msa0411190:intron 15.0%
!!! TTATTTTTAGGAATAAAAAG+AGG - chr3_2:53342280-53342299 None:intergenic 15.0%
!! ATTAAAAAAATTAGGGTAAA+TGG - chr3_2:53342672-53342691 None:intergenic 15.0%
!!! TTTACCCTAATTTTTTTAAT+CGG + chr3_2:53342672-53342691 Msa0411190:intron 15.0%
!!! TTGATGTATAAAGTATTTTT+AGG + chr3_2:53343725-53343744 Msa0411190:intron 15.0%
!! ACTACAAATAAAAAAATAGA+GGG - chr3_2:53344206-53344225 None:intergenic 15.0%
!!! GTGATTTTAGATAATTATAA+AGG + chr3_2:53344298-53344317 Msa0411190:intron 15.0%
!!! ATTGATAATTTCTTATTGTT+AGG + chr3_2:53345133-53345152 Msa0411190:three_prime_UTR 15.0%
!!! TTTTTCACAAAGAAATGAAA+GGG - chr3_2:53336210-53336229 None:intergenic 20.0%
!!! TTTTAAAGTCAATTGTTTTG+TGG + chr3_2:53336247-53336266 Msa0411190:intron 20.0%
!!! TTTAAAGTCAATTGTTTTGT+GGG + chr3_2:53336248-53336267 Msa0411190:intron 20.0%
!!! ACTTGTATGTTTTTTAGTTT+AGG + chr3_2:53336457-53336476 Msa0411190:intron 20.0%
!!! CTTGTATGTTTTTTAGTTTA+GGG + chr3_2:53336458-53336477 Msa0411190:intron 20.0%
!! TAAATGAGTATTTAATGTTG+TGG + chr3_2:53336529-53336548 Msa0411190:intron 20.0%
!!! TAATGTTGTGGTTTTTTTTT+TGG + chr3_2:53336541-53336560 Msa0411190:intron 20.0%
!!! TATAAATGTTTTTAGACTTC+TGG + chr3_2:53336878-53336897 Msa0411190:intron 20.0%
!!! TAAAAGTGCAAAGAAAATAA+TGG - chr3_2:53336935-53336954 None:intergenic 20.0%
!!! ATTTTCTTTGCACTTTTATA+TGG + chr3_2:53336937-53336956 Msa0411190:intron 20.0%
!! TAAATCAAAAGAAGAAGATA+AGG + chr3_2:53337994-53338013 Msa0411190:CDS 20.0%
!! TAAAAAAAACAATCAAAGAG+AGG - chr3_2:53338364-53338383 None:intergenic 20.0%
!!! ATTGTTTTTTTTATCTGTGA+TGG + chr3_2:53338371-53338390 Msa0411190:intron 20.0%
!! GCATATAATGAAAAAGAAAA+GGG - chr3_2:53338736-53338755 None:intergenic 20.0%
!! TGCATATAATGAAAAAGAAA+AGG - chr3_2:53338737-53338756 None:intergenic 20.0%
!!! GTATTATAGTTTGTAGTTTT+TGG - chr3_2:53340144-53340163 None:intergenic 20.0%
!!! GCAACATATTCATATTTTTA+TGG + chr3_2:53341108-53341127 Msa0411190:intron 20.0%
!!! CAAAACCAATTTTTAAAAAC+CGG + chr3_2:53341739-53341758 Msa0411190:intron 20.0%
!!! AAAACCAATTTTTAAAAACC+GGG + chr3_2:53341740-53341759 Msa0411190:intron 20.0%
!!! GCCAAATACTAATTTTTATT+TGG - chr3_2:53341990-53342009 None:intergenic 20.0%
!! AAAGATTGTTCAATAAAAGT+CGG - chr3_2:53342091-53342110 None:intergenic 20.0%
!!! GGTTATGTTTGTTTATTTTT+AGG - chr3_2:53342292-53342311 None:intergenic 20.0%
!!! TGCATGCAAATAATATTTTA+TGG + chr3_2:53342511-53342530 Msa0411190:intron 20.0%
!!! GCATGCAAATAATATTTTAT+GGG + chr3_2:53342512-53342531 Msa0411190:intron 20.0%
!!! TTTGCCGATTAAAAAAATTA+GGG - chr3_2:53342679-53342698 None:intergenic 20.0%
!!! TTTTGCCGATTAAAAAAATT+AGG - chr3_2:53342680-53342699 None:intergenic 20.0%
!!! TCATTAGTATAAGTTGATAT+TGG + chr3_2:53342723-53342742 Msa0411190:intron 20.0%
!! TAAAAGAAATAATGACAACA+GGG - chr3_2:53343365-53343384 None:intergenic 20.0%
!!! TATATTTTAACTAACGGAAA+AGG - chr3_2:53343495-53343514 None:intergenic 20.0%
!!! GAGAAAAAAACTTTCAATTT+TGG - chr3_2:53343841-53343860 None:intergenic 20.0%
!!! CTCATAATTTTAACTGAAAA+AGG - chr3_2:53343956-53343975 None:intergenic 20.0%
!!! TAAAAGAATTTTGCTCTTAA+AGG - chr3_2:53343996-53344015 None:intergenic 20.0%
!! TAAATATGCTAGATTGTTAA+GGG - chr3_2:53344099-53344118 None:intergenic 20.0%
!!! AATCTAGCATATTTAGTTTT+AGG + chr3_2:53344104-53344123 Msa0411190:intron 20.0%
!! AAATTCAAGATTAAGTATCA+AGG - chr3_2:53344179-53344198 None:intergenic 20.0%
!! CTACAAATAAAAAAATAGAG+GGG - chr3_2:53344205-53344224 None:intergenic 20.0%
!! GACTACAAATAAAAAAATAG+AGG - chr3_2:53344207-53344226 None:intergenic 20.0%
!! ATAGATCAAAGAAAATTGAT+AGG - chr3_2:53344229-53344248 None:intergenic 20.0%
!!! TAAAATTTTCAAGAGATTTG+TGG - chr3_2:53344332-53344351 None:intergenic 20.0%
!! ATTATGTAGGATTTATGTTA+GGG + chr3_2:53344365-53344384 Msa0411190:intron 20.0%
!!! ATTAAAACTTTTTTTGTCAC+AGG - chr3_2:53344583-53344602 None:intergenic 20.0%
!!! TGTGACAAAAAAAGTTTTAA+TGG + chr3_2:53344582-53344601 Msa0411190:intron 20.0%
!!! AAGTTTTAATGGATAAGTTT+TGG + chr3_2:53344593-53344612 Msa0411190:intron 20.0%
!!! AGTTTTAATGGATAAGTTTT+GGG + chr3_2:53344594-53344613 Msa0411190:intron 20.0%
!! TAGAAAGAAAGAAAGAAAAA+AGG - chr3_2:53345051-53345070 None:intergenic 20.0%
!!! CTTTTTCACAAAGAAATGAA+AGG - chr3_2:53336211-53336230 None:intergenic 25.0%
!!! TTTAGGGTTTGATCTTTTTA+AGG + chr3_2:53336474-53336493 Msa0411190:intron 25.0%
!! TTAGGGTTTGATCTTTTTAA+GGG + chr3_2:53336475-53336494 Msa0411190:intron 25.0%
! CTTAATTATTCATTCATCTC+AGG + chr3_2:53336567-53336586 Msa0411190:intron 25.0%
!! ATTAGCGTCACTTTAATAAA+TGG + chr3_2:53336726-53336745 Msa0411190:intron 25.0%
! AAAGAGGATAAGAAAAATGA+TGG + chr3_2:53337341-53337360 Msa0411190:CDS 25.0%
! TACAGAAGATAAAGAAGAAA+AGG + chr3_2:53337766-53337785 Msa0411190:CDS 25.0%
! TTACGAGTATATACATAGAA+CGG - chr3_2:53338407-53338426 None:intergenic 25.0%
! TTGACTATCAAACAATATAC+CGG - chr3_2:53338526-53338545 None:intergenic 25.0%
! GCACGGTTATATATATTATA+TGG - chr3_2:53338605-53338624 None:intergenic 25.0%
! CAATAAATTAGTAGTAGTAG+TGG + chr3_2:53339376-53339395 Msa0411190:intron 25.0%
!! TTCCTTTTACTCATATGTTT+AGG + chr3_2:53339611-53339630 Msa0411190:intron 25.0%
!!! CTTTCATTTTTCTTCTTTAG+TGG + chr3_2:53339740-53339759 Msa0411190:intron 25.0%
!! AGTAATATATTGAGGTTTTC+TGG + chr3_2:53340084-53340103 Msa0411190:CDS 25.0%
!!! TTTTTTTTTTGAGTCCTTGT+CGG + chr3_2:53340280-53340299 Msa0411190:intron 25.0%
! TATTAGGATTTAACAACCTT+TGG - chr3_2:53340306-53340325 None:intergenic 25.0%
! GTGTAATAAAGAGAAGTTAT+TGG + chr3_2:53340380-53340399 Msa0411190:intron 25.0%
! AAATTAGCATAACATCATGA+AGG - chr3_2:53341059-53341078 None:intergenic 25.0%
! ATTAATAACCTGGAATTCAT+GGG - chr3_2:53341345-53341364 None:intergenic 25.0%
! AACAAGTTTCATTAATAACC+TGG - chr3_2:53341355-53341374 None:intergenic 25.0%
! ATAGTGAAAAGGTTATAAGT+TGG - chr3_2:53341381-53341400 None:intergenic 25.0%
! TTCATCAACTAATAGTGAAA+AGG - chr3_2:53341392-53341411 None:intergenic 25.0%
!!! ACTATTAGTTGATGAATACT+AGG + chr3_2:53341396-53341415 Msa0411190:intron 25.0%
!!! GAAAAAAAGAGGGTATTTTT+GGG - chr3_2:53341614-53341633 None:intergenic 25.0%
! TACAAAAAACGAAAAAACGA+CGG - chr3_2:53341644-53341663 None:intergenic 25.0%
! TACTCTTAAATTTCTATGCT+TGG - chr3_2:53342064-53342083 None:intergenic 25.0%
!! TTTTATTGAACAATCTTTGC+AGG + chr3_2:53342093-53342112 Msa0411190:intron 25.0%
!!! TTTTAGGAATAAAAAGAGGA+AGG - chr3_2:53342276-53342295 None:intergenic 25.0%
! AAAATGACTATTGTGGAATA+TGG - chr3_2:53342371-53342390 None:intergenic 25.0%
!!! TATTCCACAATAGTCATTTT+TGG + chr3_2:53342371-53342390 Msa0411190:intron 25.0%
!!! ATTCCACAATAGTCATTTTT+GGG + chr3_2:53342372-53342391 Msa0411190:intron 25.0%
!!! ATTAGTGAGACTTAGTTTTT+TGG + chr3_2:53342588-53342607 Msa0411190:intron 25.0%
!!! TCTTCTTATTTTTGAACTTG+TGG + chr3_2:53342830-53342849 Msa0411190:intron 25.0%
! AAGAAAAATGAAGATTCTTC+AGG + chr3_2:53342874-53342893 Msa0411190:CDS 25.0%
! AGAGAAAAATGAAGAAAATG+AGG + chr3_2:53342945-53342964 Msa0411190:CDS 25.0%
! AATCTGAAGATGTGAAAAAA+AGG + chr3_2:53343055-53343074 Msa0411190:CDS 25.0%
!! TTGGTATTTGATGATTTCTT+AGG - chr3_2:53343189-53343208 None:intergenic 25.0%
! ACTTTCATCAATATCATCAT+CGG - chr3_2:53343220-53343239 None:intergenic 25.0%
! AAAAGAAATAATGACAACAG+GGG - chr3_2:53343364-53343383 None:intergenic 25.0%
! GTAAAAGAAATAATGACAAC+AGG - chr3_2:53343366-53343385 None:intergenic 25.0%
!! TAAAGAAGTTGACTTCAATA+CGG + chr3_2:53343653-53343672 Msa0411190:CDS 25.0%
!!! AAAGTTTTTTTCTCTTTTGC+AGG + chr3_2:53343847-53343866 Msa0411190:intron 25.0%
! CTAAATATGCTAGATTGTTA+AGG - chr3_2:53344100-53344119 None:intergenic 25.0%
! ATATCAGTATTATGCAATCT+TGG + chr3_2:53344152-53344171 Msa0411190:intron 25.0%
!! TTTTGTTGAGTGAAAAAATG+TGG - chr3_2:53344263-53344282 None:intergenic 25.0%
! TAAAACTCAGAAGATTATGT+AGG + chr3_2:53344352-53344371 Msa0411190:intron 25.0%
! GATTATGTAGGATTTATGTT+AGG + chr3_2:53344364-53344383 Msa0411190:intron 25.0%
! ATTTATGTTAGGGTTTAAAG+AGG + chr3_2:53344375-53344394 Msa0411190:intron 25.0%
! ACATAACATAATCATGTTTG+AGG - chr3_2:53344552-53344571 None:intergenic 25.0%
! TCAAACATGATTATGTTATG+TGG + chr3_2:53344551-53344570 Msa0411190:intron 25.0%
!!! CAATTTATTTTGTGTAGAAG+TGG + chr3_2:53344883-53344902 Msa0411190:three_prime_UTR 25.0%
! CTACTGTTGAGAATTTTGTT+TGG + chr3_2:53336434-53336453 Msa0411190:intron 30.0%
CTCATTTAGCATTAACTTCA+GGG - chr3_2:53336517-53336536 None:intergenic 30.0%
ACTCATTTAGCATTAACTTC+AGG - chr3_2:53336518-53336537 None:intergenic 30.0%
! GCTAATGAACATTTTACAAC+CGG - chr3_2:53336712-53336731 None:intergenic 30.0%
AAATACCCTTCTGTTGTAAA+TGG + chr3_2:53336844-53336863 Msa0411190:intron 30.0%
!!! TGTTTTTAGACTTCTGGTTA+TGG + chr3_2:53336884-53336903 Msa0411190:intron 30.0%
TATCTAAGCAAGATCAGTAT+GGG + chr3_2:53337038-53337057 Msa0411190:exon 30.0%
!! GTTTCTAAGACTGATTCAAA+TGG + chr3_2:53337083-53337102 Msa0411190:CDS 30.0%
TGAAGAAGATAAGAAAGTTG+AGG + chr3_2:53337229-53337248 Msa0411190:CDS 30.0%
GAAGAAGATAAGAAAGTTGA+GGG + chr3_2:53337230-53337249 Msa0411190:CDS 30.0%
AGGATAAGAAAGATGAAGAT+GGG + chr3_2:53337270-53337289 Msa0411190:CDS 30.0%
TGATGTGGTAAAAGTAAAAG+AGG + chr3_2:53337427-53337446 Msa0411190:CDS 30.0%
GTGGAAAAGAAAGATAATGA+GGG + chr3_2:53337590-53337609 Msa0411190:CDS 30.0%
TGGAAAAGAAAGATAATGAG+GGG + chr3_2:53337591-53337610 Msa0411190:CDS 30.0%
GGAAGAAGTAAAAGATGATA+TGG + chr3_2:53337613-53337632 Msa0411190:CDS 30.0%
! ATTTTCTCATTCTCAGATTC+AGG - chr3_2:53337719-53337738 None:intergenic 30.0%
TGAATCTGAGAATGAGAAAA+TGG + chr3_2:53337718-53337737 Msa0411190:CDS 30.0%
GAAAGTGAAAGACAAAAAGA+AGG + chr3_2:53338078-53338097 Msa0411190:CDS 30.0%
! CCATTGGGTATATCTTTTAA+AGG - chr3_2:53338334-53338353 None:intergenic 30.0%
! CCTTTAAAAGATATACCCAA+TGG + chr3_2:53338331-53338350 Msa0411190:CDS 30.0%
AAAAGATATACCCAATGGTA+TGG + chr3_2:53338336-53338355 Msa0411190:intron 30.0%
!! GAAAGTGTTGTGAACAAATA+AGG - chr3_2:53339208-53339227 None:intergenic 30.0%
CACCTAAACATATGAGTAAA+AGG - chr3_2:53339616-53339635 None:intergenic 30.0%
! TGTTTACATTTGTTACACTG+TGG + chr3_2:53339676-53339695 Msa0411190:intron 30.0%
! GAATCAACTTATTAGCTCTT+CGG - chr3_2:53339721-53339740 None:intergenic 30.0%
ACAAAATCAAATCAATACGG+TGG - chr3_2:53339892-53339911 None:intergenic 30.0%
! ATCAGAATTTTGTATAGTGC+AGG + chr3_2:53339937-53339956 Msa0411190:intron 30.0%
!!! ATGTCAAGCTTTTTAAGTGT+AGG - chr3_2:53339963-53339982 None:intergenic 30.0%
! TACCTTTGATATTTGGGTTA+TGG + chr3_2:53339990-53340009 Msa0411190:intron 30.0%
TTCCATAACCCAAATATCAA+AGG - chr3_2:53339995-53340014 None:intergenic 30.0%
! ATTTGGGTTATGGAATTTAC+AGG + chr3_2:53340000-53340019 Msa0411190:intron 30.0%
AGGTCAAGAGTAATATATTG+AGG + chr3_2:53340076-53340095 Msa0411190:CDS 30.0%
ACAAAGGATTTAACAACCTT+AGG - chr3_2:53340223-53340242 None:intergenic 30.0%
CGGTAGAAAAATTACTACAA+AGG - chr3_2:53340239-53340258 None:intergenic 30.0%
AAGTAAAAGAAAAGCTAGAC+AGG + chr3_2:53340358-53340377 Msa0411190:intron 30.0%
AATTACCAAGTCAACAACAA+AGG + chr3_2:53340428-53340447 Msa0411190:intron 30.0%
!!! CAAAGTCACTTATTTTGAAC+CGG - chr3_2:53340509-53340528 None:intergenic 30.0%
! CTTTGTTATATGTATGCACA+GGG + chr3_2:53340787-53340806 Msa0411190:intron 30.0%
! TTTGTTATATGTATGCACAG+GGG + chr3_2:53340788-53340807 Msa0411190:intron 30.0%
!! CATATATGTTCTAGCCTTAA+AGG + chr3_2:53340864-53340883 Msa0411190:intron 30.0%
TTAAATGATACCAGTCAACA+GGG - chr3_2:53340893-53340912 None:intergenic 30.0%
AGATATTATTGCTAAGCTGA+CGG + chr3_2:53340952-53340971 Msa0411190:CDS 30.0%
ACATCATGAAGGAAAAAAGT+TGG - chr3_2:53341048-53341067 None:intergenic 30.0%
AGCTTCTAATAACACATTTG+TGG - chr3_2:53341252-53341271 None:intergenic 30.0%
CATTAATAACCTGGAATTCA+TGG - chr3_2:53341346-53341365 None:intergenic 30.0%
!!! GGAAAAAAAGAGGGTATTTT+TGG - chr3_2:53341615-53341634 None:intergenic 30.0%
ACAAAAAACGAAAAAACGAC+GGG - chr3_2:53341643-53341662 None:intergenic 30.0%
ATAACTACCAGTTCAATCTA+CGG - chr3_2:53341766-53341785 None:intergenic 30.0%
! TTTGTGCTGTTACATATGTA+TGG + chr3_2:53341821-53341840 Msa0411190:intron 30.0%
AATAAAAAGAGGAAGGAAAG+GGG - chr3_2:53342269-53342288 None:intergenic 30.0%
GAATAAAAAGAGGAAGGAAA+GGG - chr3_2:53342270-53342289 None:intergenic 30.0%
!!! ATAAGCTTTGGAGCTTTTAT+AGG - chr3_2:53342471-53342490 None:intergenic 30.0%
TATGTAGTCGATGAAATGTA+AGG + chr3_2:53342555-53342574 Msa0411190:intron 30.0%
!! TTTTGGAGATGTTGAATTGA+AGG + chr3_2:53342605-53342624 Msa0411190:intron 30.0%
CTAATGATCAGATTACAAGT+TGG - chr3_2:53342710-53342729 None:intergenic 30.0%
! TTCTCAGGAATATCATTTTC+AGG - chr3_2:53342976-53342995 None:intergenic 30.0%
! TTTCTTTGCAGATGATGTTT+TGG - chr3_2:53343091-53343110 None:intergenic 30.0%
TGATATTGATGAAAGTCCAA+AGG + chr3_2:53343224-53343243 Msa0411190:CDS 30.0%
!!! AAAGTCCAAAGGTATTTTCT+AGG + chr3_2:53343235-53343254 Msa0411190:CDS 30.0%
TTCTTCCTAGAAAATACCTT+TGG - chr3_2:53343243-53343262 None:intergenic 30.0%
TAAGCAGAAAAGGTTACTAA+GGG + chr3_2:53343558-53343577 Msa0411190:intron 30.0%
ACTTCAATACGGTAATATGT+TGG + chr3_2:53343664-53343683 Msa0411190:intron 30.0%
AGGTATAACTACTGATATTG+TGG - chr3_2:53343936-53343955 None:intergenic 30.0%
TCACAAGAAAATGCAAAAAC+TGG - chr3_2:53344031-53344050 None:intergenic 30.0%
TCATTATCCTTTAACCTGAA+CGG + chr3_2:53344052-53344071 Msa0411190:intron 30.0%
CACTCAACAAAAGTTTATGA+TGG + chr3_2:53344271-53344290 Msa0411190:intron 30.0%
AACATGATTATGTTATGTGG+AGG + chr3_2:53344554-53344573 Msa0411190:intron 30.0%
ACATGATTATGTTATGTGGA+GGG + chr3_2:53344555-53344574 Msa0411190:intron 30.0%
TTCAGCTAACAAATTTGATG+TGG + chr3_2:53344645-53344664 Msa0411190:intron 30.0%
AATTATCAATAAGCCCAGAA+AGG - chr3_2:53345123-53345142 None:intergenic 30.0%
AAGCTTACAGATTCAGGATT+TGG - chr3_2:53336167-53336186 None:intergenic 35.0%
AGTAGAAAGCTTACAGATTC+AGG - chr3_2:53336173-53336192 None:intergenic 35.0%
! TTGTGGGTCGTGTAAATTTT+AGG + chr3_2:53336264-53336283 Msa0411190:intron 35.0%
! TGTGGGTCGTGTAAATTTTA+GGG + chr3_2:53336265-53336284 Msa0411190:intron 35.0%
! TTGAACTTAGGTTTTTGCTG+TGG + chr3_2:53336404-53336423 Msa0411190:intron 35.0%
GTTGTTGCAAATTACACTTG+AGG + chr3_2:53336620-53336639 Msa0411190:intron 35.0%
AGTTTAACATTGTAACCTCG+AGG + chr3_2:53336661-53336680 Msa0411190:intron 35.0%
CTATCTAAGCAAGATCAGTA+TGG + chr3_2:53337037-53337056 Msa0411190:exon 35.0%
! TCTAAGACTGATTCAAATGG+AGG + chr3_2:53337086-53337105 Msa0411190:CDS 35.0%
TGTTGTTGAGAAGAAAGACT+TGG + chr3_2:53337136-53337155 Msa0411190:CDS 35.0%
AAGAAAGACTTGGAAACTGA+TGG + chr3_2:53337146-53337165 Msa0411190:CDS 35.0%
GAGGATAAGAAAGATGAAGA+TGG + chr3_2:53337269-53337288 Msa0411190:CDS 35.0%
GGATAAGAAAGATGAAGATG+GGG + chr3_2:53337271-53337290 Msa0411190:CDS 35.0%
! GGATAAGAAAAATGATGGAG+TGG + chr3_2:53337346-53337365 Msa0411190:CDS 35.0%
CAATGTAGCTGAAGTAAAAG+AGG + chr3_2:53337394-53337413 Msa0411190:CDS 35.0%
AGAGGATAAGAAAGATGATG+TGG + chr3_2:53337412-53337431 Msa0411190:CDS 35.0%
AAAGAGGAGAAGAAAGATGA+AGG + chr3_2:53337479-53337498 Msa0411190:CDS 35.0%
AAGAGGAGAAGAAAGATGAA+GGG + chr3_2:53337480-53337499 Msa0411190:CDS 35.0%
AAAGAGGAGAAGAAAGATGA+TGG + chr3_2:53337479-53337498 Msa0411190:CDS 35.0%
AAGAGGAGAAGAAAGATGAT+GGG + chr3_2:53337516-53337535 Msa0411190:CDS 35.0%
GGAAGAAGTAAAAGAGGATA+AGG + chr3_2:53337541-53337560 Msa0411190:CDS 35.0%
AAAGAGGATAAGGAAGTTGA+TGG + chr3_2:53337551-53337570 Msa0411190:CDS 35.0%
GGTGGAAAAGAAAGATAATG+AGG + chr3_2:53337589-53337608 Msa0411190:CDS 35.0%
GGAAAAGAAAGATAATGAGG+GGG + chr3_2:53337592-53337611 Msa0411190:CDS 35.0%
! TGATGATGACATCCAAGAAA+TGG + chr3_2:53337673-53337692 Msa0411190:CDS 35.0%
AAAGGAAAAAGAAGATGCAG+AGG + chr3_2:53337784-53337803 Msa0411190:CDS 35.0%
AAGGAAAAAGAAGATGCAGA+GGG + chr3_2:53337785-53337804 Msa0411190:CDS 35.0%
AAAAGAAGAAGATAAGGCAG+AGG + chr3_2:53338000-53338019 Msa0411190:CDS 35.0%
AAAGAAGAAGATAAGGCAGA+GGG + chr3_2:53338001-53338020 Msa0411190:CDS 35.0%
AAGGAAATCAGTTGAGAGAT+TGG + chr3_2:53338153-53338172 Msa0411190:CDS 35.0%
AATCGATAAAGATGCAACCA+AGG + chr3_2:53338183-53338202 Msa0411190:CDS 35.0%
CTTTGCAATGTGTAATTCCT+TGG - chr3_2:53338203-53338222 None:intergenic 35.0%
CAAGGAATTACACATTGCAA+AGG + chr3_2:53338201-53338220 Msa0411190:CDS 35.0%
AGTTTCCCTTTCAATTTGCA+GGG + chr3_2:53338298-53338317 Msa0411190:intron 35.0%
TAGTACAAGCAAGACAGTAT+AGG + chr3_2:53338468-53338487 Msa0411190:intron 35.0%
AACTACATATATTGCACGCA+CGG - chr3_2:53338622-53338641 None:intergenic 35.0%
! GTTTTACCTGTTCAAAGTTG+TGG + chr3_2:53338896-53338915 Msa0411190:intron 35.0%
AGAACCAAATCATGATTCTC+TGG - chr3_2:53338961-53338980 None:intergenic 35.0%
! TTCACAGAAGTACAGCAAAT+TGG - chr3_2:53338990-53339009 None:intergenic 35.0%
! TTTGCTGTACTTCTGTGAAT+TGG + chr3_2:53338991-53339010 Msa0411190:intron 35.0%
ATTCATAGACAAGTCAACTC+TGG + chr3_2:53339023-53339042 Msa0411190:intron 35.0%
TGGTCTCAAAACGACTTAAA+TGG + chr3_2:53339082-53339101 Msa0411190:intron 35.0%
GGTCTCAAAACGACTTAAAT+GGG + chr3_2:53339083-53339102 Msa0411190:intron 35.0%
ACAAATTAATAGTGCTGCCT+CGG - chr3_2:53339112-53339131 None:intergenic 35.0%
AACATCCAGCAACATACTTT+GGG - chr3_2:53339155-53339174 None:intergenic 35.0%
AAACATCCAGCAACATACTT+TGG - chr3_2:53339156-53339175 None:intergenic 35.0%
CTAAAAAACTCCCACATATC+AGG - chr3_2:53339646-53339665 None:intergenic 35.0%
! TGGCATTTAAGTTATCCAGA+AGG + chr3_2:53339760-53339779 Msa0411190:CDS 35.0%
TTGTTCCATACAATCCTCTT+TGG + chr3_2:53339804-53339823 Msa0411190:CDS 35.0%
GGATTAAGAAAAGAGTCACA+TGG - chr3_2:53340042-53340061 None:intergenic 35.0%
! CTCTTTTCTTAATCCTTTGC+AGG + chr3_2:53340047-53340066 Msa0411190:intron 35.0%
!!! TGAGGTTTTCTGGTTTTGTA+TGG + chr3_2:53340094-53340113 Msa0411190:CDS 35.0%
! TTTTGTATGGCATGACAATG+AGG + chr3_2:53340107-53340126 Msa0411190:CDS 35.0%
! AAAGGCTTTTGTTCATCCTA+AGG + chr3_2:53340204-53340223 Msa0411190:intron 35.0%
!! ACAAACCTTTGTTGTTGACT+TGG - chr3_2:53340436-53340455 None:intergenic 35.0%
AGTCAACAACAAAGGTTTGT+TGG + chr3_2:53340436-53340455 Msa0411190:intron 35.0%
GGTAGCATATAAGATGTTGT+TGG + chr3_2:53340596-53340615 Msa0411190:intron 35.0%
!! CAAGGTCATGTATTTTGAGA+CGG + chr3_2:53340729-53340748 Msa0411190:intron 35.0%
! GCTTTGTTATATGTATGCAC+AGG + chr3_2:53340786-53340805 Msa0411190:intron 35.0%
GTTAAATGATACCAGTCAAC+AGG - chr3_2:53340894-53340913 None:intergenic 35.0%
GCAATAATATCTTCCTGCAT+AGG - chr3_2:53340944-53340963 None:intergenic 35.0%
CACGAGAAACAATACTTTCT+TGG - chr3_2:53341089-53341108 None:intergenic 35.0%
GAGAGAAAGACAAGCATAAA+AGG - chr3_2:53341293-53341312 None:intergenic 35.0%
!!! CGCGTTTTTTTACTGTGTTT+TGG - chr3_2:53341547-53341566 None:intergenic 35.0%
CGGGAAAAAGGAAAAAAAGA+GGG - chr3_2:53341624-53341643 None:intergenic 35.0%
ACGGGAAAAAGGAAAAAAAG+AGG - chr3_2:53341625-53341644 None:intergenic 35.0%
TCCTAGAAAGACAAACTGAT+TGG + chr3_2:53341665-53341684 Msa0411190:intron 35.0%
TCCAATCAGTTTGTCTTTCT+AGG - chr3_2:53341669-53341688 None:intergenic 35.0%
GAGGGAAATATTGGATGAAT+AGG - chr3_2:53341705-53341724 None:intergenic 35.0%
GGTTGTTATGTCGAAGTTTA+GGG - chr3_2:53341872-53341891 None:intergenic 35.0%
TGGTTGTTATGTCGAAGTTT+AGG - chr3_2:53341873-53341892 None:intergenic 35.0%
TAATCTATGAAGTCCAGTTG+CGG - chr3_2:53341930-53341949 None:intergenic 35.0%
! AGAATATCTTTTCACTCGGT+AGG - chr3_2:53341961-53341980 None:intergenic 35.0%
TACCGAGTGAAAAGATATTC+TGG + chr3_2:53341960-53341979 Msa0411190:intron 35.0%
! GTCCAGAATATCTTTTCACT+CGG - chr3_2:53341965-53341984 None:intergenic 35.0%
GGAATAAAAAGAGGAAGGAA+AGG - chr3_2:53342271-53342290 None:intergenic 35.0%
CATAACCTACAATTAGCAAG+AGG + chr3_2:53342305-53342324 Msa0411190:intron 35.0%
TTAGACCTCTTGCTAATTGT+AGG - chr3_2:53342313-53342332 None:intergenic 35.0%
GGTGTTAAGCTTATAGACTT+TGG + chr3_2:53342396-53342415 Msa0411190:intron 35.0%
CAATTATGGGAGATAAGCTT+TGG - chr3_2:53342483-53342502 None:intergenic 35.0%
CAAAGCTTATCTCCCATAAT+TGG + chr3_2:53342481-53342500 Msa0411190:intron 35.0%
TATCTCCCATAATTGGACAA+CGG + chr3_2:53342488-53342507 Msa0411190:intron 35.0%
AAATGAAGATTCTTCAGGAG+TGG + chr3_2:53342879-53342898 Msa0411190:CDS 35.0%
GTTTCATCATCAGATTTCTC+AGG - chr3_2:53342991-53343010 None:intergenic 35.0%
!! TTTGCAGATGATGTTTTGGA+AGG - chr3_2:53343087-53343106 None:intergenic 35.0%
! TTTCTCAGTTTTGCTTCTTC+CGG - chr3_2:53343121-53343140 None:intergenic 35.0%
AAGCAAAACTGAGAAAACCA+CGG + chr3_2:53343125-53343144 Msa0411190:CDS 35.0%
TCAATATCATCATCGGACTT+TGG - chr3_2:53343213-53343232 None:intergenic 35.0%
! CTTTGTGTTCTAAGCAGAAA+AGG + chr3_2:53343548-53343567 Msa0411190:intron 35.0%
CTAAGCAGAAAAGGTTACTA+AGG + chr3_2:53343557-53343576 Msa0411190:intron 35.0%
GAAAAGGTTACTAAGGGAAA+AGG + chr3_2:53343564-53343583 Msa0411190:intron 35.0%
! ATAATGCACCTTCATTGACT+GGG + chr3_2:53343761-53343780 Msa0411190:intron 35.0%
TTTCAGAATGTCGGTAAATG+TGG - chr3_2:53343873-53343892 None:intergenic 35.0%
ACCAAGTAGTTTCAGAATGT+CGG - chr3_2:53343882-53343901 None:intergenic 35.0%
! AATTATGCCGTTCAGGTTAA+AGG - chr3_2:53344062-53344081 None:intergenic 35.0%
TATGTTAGGGTTTAAAGAGG+TGG + chr3_2:53344378-53344397 Msa0411190:intron 35.0%
ATGTTAGGGTTTAAAGAGGT+GGG + chr3_2:53344379-53344398 Msa0411190:intron 35.0%
TTTAAAGAGGTGGGGAAAAT+TGG + chr3_2:53344388-53344407 Msa0411190:intron 35.0%
TTAAAGAGGTGGGGAAAATT+GGG + chr3_2:53344389-53344408 Msa0411190:intron 35.0%
! ACATAATCATGTTTGAGGCA+CGG - chr3_2:53344547-53344566 None:intergenic 35.0%
!!! CTTGATAGCTGACTTTTTTG+GGG - chr3_2:53344677-53344696 None:intergenic 35.0%
!!! GCTTGATAGCTGACTTTTTT+GGG - chr3_2:53344678-53344697 None:intergenic 35.0%
!!! AGCTTGATAGCTGACTTTTT+TGG - chr3_2:53344679-53344698 None:intergenic 35.0%
!! GTTTGTTGTTCTCTTCAGAT+TGG - chr3_2:53344940-53344959 None:intergenic 35.0%
! CATAATTTAGTGCAGCCTTT+TGG + chr3_2:53344971-53344990 Msa0411190:three_prime_UTR 35.0%
GTACACAATAAACTACATGC+TGG - chr3_2:53345009-53345028 None:intergenic 35.0%
! TTTGAAGTTGACACCTTTCT+GGG + chr3_2:53345107-53345126 Msa0411190:three_prime_UTR 35.0%
GCTGAGTTTAAATCCCCTTA+CGG + chr3_2:53336685-53336704 Msa0411190:intron 40.0%
CTGAGTTTAAATCCCCTTAC+GGG + chr3_2:53336686-53336705 Msa0411190:intron 40.0%
GCACACCATTTACAACAGAA+GGG - chr3_2:53336852-53336871 None:intergenic 40.0%
AGCACACCATTTACAACAGA+AGG - chr3_2:53336853-53336872 None:intergenic 40.0%
TCTGTTGTAAATGGTGTGCT+AGG + chr3_2:53336853-53336872 Msa0411190:intron 40.0%
CTGTTGTAAATGGTGTGCTA+GGG + chr3_2:53336854-53336873 Msa0411190:intron 40.0%
ACTCAGTTCAATCGAACAAC+TGG - chr3_2:53336991-53337010 None:intergenic 40.0%
TTGTTCGATTGAACTGAGTG+TGG + chr3_2:53336992-53337011 Msa0411190:five_prime_UTR 40.0%
AAAGACTTGGAAACTGATGG+AGG + chr3_2:53337149-53337168 Msa0411190:CDS 40.0%
AAGACTTGGAAACTGATGGA+GGG + chr3_2:53337150-53337169 Msa0411190:CDS 40.0%
AGATAAGAAAGTTGAGGGTG+TGG + chr3_2:53337235-53337254 Msa0411190:CDS 40.0%
TAAGAAAGATGAAGATGGGG+TGG + chr3_2:53337274-53337293 Msa0411190:CDS 40.0%
AAGAAAGATGAAGATGGGGT+GGG + chr3_2:53337275-53337294 Msa0411190:CDS 40.0%
AAAGAGGATAAGAAAGCCGA+TGG + chr3_2:53337305-53337324 Msa0411190:CDS 40.0%
AAGAGGATAAGAAAGCCGAT+GGG + chr3_2:53337306-53337325 Msa0411190:CDS 40.0%
AGAGGATAAGAAAGACGATG+TGG + chr3_2:53337445-53337464 Msa0411190:CDS 40.0%
AGAGGAGAAGAAAGATGAAG+GGG + chr3_2:53337481-53337500 Msa0411190:CDS 40.0%
AGAGGAGAAGAAAGATGATG+GGG + chr3_2:53337517-53337536 Msa0411190:CDS 40.0%
! TGATGGTGCAGATGAAGTAA+AGG + chr3_2:53337568-53337587 Msa0411190:CDS 40.0%
! TGATAGTGTGAAAGAAGCAG+TGG + chr3_2:53337640-53337659 Msa0411190:CDS 40.0%
TGACATCCAAGAAATGGAAG+AGG + chr3_2:53337679-53337698 Msa0411190:CDS 40.0%
TGTCATCCTCTTCCATTTCT+TGG - chr3_2:53337688-53337707 None:intergenic 40.0%
GAAAATGGATGTTGATGCTG+AGG + chr3_2:53337733-53337752 Msa0411190:CDS 40.0%
! TAGCATTGAGGAGAAAGAAG+AGG + chr3_2:53337808-53337827 Msa0411190:CDS 40.0%
! AGCATTGAGGAGAAAGAAGA+GGG + chr3_2:53337809-53337828 Msa0411190:CDS 40.0%
GAAAGAAGAGGGTAATGATG+AGG + chr3_2:53337820-53337839 Msa0411190:CDS 40.0%
TGAGGAGAAAACTGAAGTAG+AGG + chr3_2:53337838-53337857 Msa0411190:CDS 40.0%
GAAAACTGAAGTAGAGGAGA+AGG + chr3_2:53337844-53337863 Msa0411190:CDS 40.0%
GAAATCTGAAGAAGAGACAG+AGG + chr3_2:53337886-53337905 Msa0411190:CDS 40.0%
!! GATCAAAAAAGCGTTCCAGA+GGG + chr3_2:53338041-53338060 Msa0411190:CDS 40.0%
CAGTTTCCCTTTCAATTTGC+AGG + chr3_2:53338297-53338316 Msa0411190:intron 40.0%
TCGTAAGCAAAAGTTAGCTG+AGG + chr3_2:53338421-53338440 Msa0411190:intron 40.0%
CGTAAGCAAAAGTTAGCTGA+GGG + chr3_2:53338422-53338441 Msa0411190:intron 40.0%
TCACTTCTCAACTCTTTGTC+CGG + chr3_2:53338504-53338523 Msa0411190:intron 40.0%
CTCAACTACAAGATTGAGTG+CGG + chr3_2:53338765-53338784 Msa0411190:intron 40.0%
AAGACTGCATTTCGATGAGA+TGG + chr3_2:53338872-53338891 Msa0411190:intron 40.0%
TGTATGCCACAACTTTGAAC+AGG - chr3_2:53338905-53338924 None:intergenic 40.0%
TGAATTCTGCGACTATGGTT+GGG - chr3_2:53338929-53338948 None:intergenic 40.0%
CATAGTCGCAGAATTCACTA+CGG + chr3_2:53338932-53338951 Msa0411190:intron 40.0%
TGTTCACAACACTTTCAACG+TGG + chr3_2:53339212-53339231 Msa0411190:intron 40.0%
GTTCACAACACTTTCAACGT+GGG + chr3_2:53339213-53339232 Msa0411190:intron 40.0%
ACAGCAAACGATATTGGGAT+AGG - chr3_2:53339324-53339343 None:intergenic 40.0%
!! ATCCCAATATCGTTTGCTGT+TGG + chr3_2:53339324-53339343 Msa0411190:intron 40.0%
!! TCCCAATATCGTTTGCTGTT+GGG + chr3_2:53339325-53339344 Msa0411190:intron 40.0%
ACCCAACAGCAAACGATATT+GGG - chr3_2:53339329-53339348 None:intergenic 40.0%
AACCCAACAGCAAACGATAT+TGG - chr3_2:53339330-53339349 None:intergenic 40.0%
ATCAAGAGTTGCGTGATATG+TGG + chr3_2:53339585-53339604 Msa0411190:intron 40.0%
TCAAGAGTTGCGTGATATGT+GGG + chr3_2:53339586-53339605 Msa0411190:intron 40.0%
GTGAAGTTGACCTGATATGT+GGG + chr3_2:53339633-53339652 Msa0411190:intron 40.0%
ACTATCATCAGTCTTCCTTC+TGG - chr3_2:53339778-53339797 None:intergenic 40.0%
TCCATACAATCCTCTTTGGA+AGG + chr3_2:53339808-53339827 Msa0411190:CDS 40.0%
TCCTTCCAAAGAGGATTGTA+TGG - chr3_2:53339812-53339831 None:intergenic 40.0%
!!! GTCACTTATTTTGAACCGGA+GGG - chr3_2:53340505-53340524 None:intergenic 40.0%
!!! AGTCACTTATTTTGAACCGG+AGG - chr3_2:53340506-53340525 None:intergenic 40.0%
TATGTGTGCAACAGTCAACA+AGG + chr3_2:53340711-53340730 Msa0411190:intron 40.0%
!!! GTCATGTATTTTGAGACGGA+GGG + chr3_2:53340733-53340752 Msa0411190:intron 40.0%
AGTCAACAGGGTTTCCTTTA+AGG - chr3_2:53340881-53340900 None:intergenic 40.0%
TTAAAGGAAACCCTGTTGAC+TGG + chr3_2:53340880-53340899 Msa0411190:intron 40.0%
CTGCATAGGCAGAAATTCAT+TGG - chr3_2:53340930-53340949 None:intergenic 40.0%
CAATGAATTTCTGCCTATGC+AGG + chr3_2:53340928-53340947 Msa0411190:intron 40.0%
!! TACTTCAAGAGGTTCTGGAA+AGG + chr3_2:53341204-53341223 Msa0411190:CDS 40.0%
AATAACCTGGAATTCATGGG+AGG - chr3_2:53341342-53341361 None:intergenic 40.0%
GCCAATAACAACCACAATTG+TGG + chr3_2:53341436-53341455 Msa0411190:intron 40.0%
GCCACAATTGTGGTTGTTAT+TGG - chr3_2:53341440-53341459 None:intergenic 40.0%
ACGAAAAAACGACGGGAAAA+AGG - chr3_2:53341636-53341655 None:intergenic 40.0%
AGCAGAGAAGAGGGAAATAT+TGG - chr3_2:53341714-53341733 None:intergenic 40.0%
TTTGTCACAAGCAGAGAAGA+GGG - chr3_2:53341723-53341742 None:intergenic 40.0%
! TTTTGTCACAAGCAGAGAAG+AGG - chr3_2:53341724-53341743 None:intergenic 40.0%
!! ACGGCCCGGTTTTTAAAAAT+TGG - chr3_2:53341747-53341766 None:intergenic 40.0%
CTTCCAATGATAAGAGAGCT+TGG + chr3_2:53342219-53342238 Msa0411190:intron 40.0%
AGACCAAGCTCTCTTATCAT+TGG - chr3_2:53342225-53342244 None:intergenic 40.0%
CCTCCCAAAAATGACTATTG+TGG - chr3_2:53342378-53342397 None:intergenic 40.0%
!!! CCACAATAGTCATTTTTGGG+AGG + chr3_2:53342375-53342394 Msa0411190:intron 40.0%
AGCAAATAAGCACCAACCAT+TGG + chr3_2:53342419-53342438 Msa0411190:intron 40.0%
AAATAAGCACCAACCATTGG+AGG + chr3_2:53342422-53342441 Msa0411190:intron 40.0%
AATAAGCACCAACCATTGGA+GGG + chr3_2:53342423-53342442 Msa0411190:intron 40.0%
ATGCACCGTTGTCCAATTAT+GGG - chr3_2:53342496-53342515 None:intergenic 40.0%
GTCGATGAAATGTAAGGATG+AGG + chr3_2:53342561-53342580 Msa0411190:intron 40.0%
AGATGTTGAATTGAAGGCTG+TGG + chr3_2:53342611-53342630 Msa0411190:intron 40.0%
! TGTGGCTGTATACTTTTCAG+AGG + chr3_2:53342848-53342867 Msa0411190:intron 40.0%
TGACACAGAAGATGAATCAG+AGG + chr3_2:53342918-53342937 Msa0411190:CDS 40.0%
GACACAGAAGATGAATCAGA+GGG + chr3_2:53342919-53342938 Msa0411190:CDS 40.0%
AAACGCCACAGAAATCTGAA+AGG + chr3_2:53343007-53343026 Msa0411190:CDS 40.0%
AACGCCACAGAAATCTGAAA+GGG + chr3_2:53343008-53343027 Msa0411190:CDS 40.0%
TCTTCCCTTTCAGATTTCTG+TGG - chr3_2:53343015-53343034 None:intergenic 40.0%
AGGGAAGATAAGAGTGATTC+TGG + chr3_2:53343027-53343046 Msa0411190:CDS 40.0%
GGGAAGATAAGAGTGATTCT+GGG + chr3_2:53343028-53343047 Msa0411190:CDS 40.0%
GATTTCTTAGGTGCTCTCTT+AGG - chr3_2:53343177-53343196 None:intergenic 40.0%
ATCATCATCGGACTTTGGTT+TGG - chr3_2:53343208-53343227 None:intergenic 40.0%
AGGAAGAAGAAAAGTGAGCA+AGG + chr3_2:53343255-53343274 Msa0411190:CDS 40.0%
GGAAGAAGAAAAGTGAGCAA+GGG + chr3_2:53343256-53343275 Msa0411190:CDS 40.0%
GAAGAAGAAAAGTGAGCAAG+GGG + chr3_2:53343257-53343276 Msa0411190:CDS 40.0%
AAGAAGAAAAGTGAGCAAGG+GGG + chr3_2:53343258-53343277 Msa0411190:CDS 40.0%
! GACTTTGAGGAAGACTTAGT+TGG - chr3_2:53343309-53343328 None:intergenic 40.0%
AGCTTTCTCTTTGGACTTTG+AGG - chr3_2:53343322-53343341 None:intergenic 40.0%
TCAAAGTCCAAAGAGAAAGC+TGG + chr3_2:53343321-53343340 Msa0411190:CDS 40.0%
GCATTTACCAGCTTTCTCTT+TGG - chr3_2:53343331-53343350 None:intergenic 40.0%
CATAATGCACCTTCATTGAC+TGG + chr3_2:53343760-53343779 Msa0411190:intron 40.0%
! TAATGCACCTTCATTGACTG+GGG + chr3_2:53343762-53343781 Msa0411190:intron 40.0%
!! ACCGACATTCTGAAACTACT+TGG + chr3_2:53343878-53343897 Msa0411190:CDS 40.0%
TACTGCAAATTATGCCGTTC+AGG - chr3_2:53344069-53344088 None:intergenic 40.0%
TGTTAGGGTTTAAAGAGGTG+GGG + chr3_2:53344380-53344399 Msa0411190:intron 40.0%
TTTAACGTCTTGACCAACCA+AGG + chr3_2:53344433-53344452 Msa0411190:intron 40.0%
ACCTTGGTTCACCATAGTAT+GGG - chr3_2:53344483-53344502 None:intergenic 40.0%
AACCTTGGTTCACCATAGTA+TGG - chr3_2:53344484-53344503 None:intergenic 40.0%
! TCAGGCTTAAGGTTTAAGAC+CGG - chr3_2:53344789-53344808 None:intergenic 40.0%
ACAATCAACAGTCAGGCTTA+AGG - chr3_2:53344800-53344819 None:intergenic 40.0%
! TTAAGCCTGACTGTTGATTG+TGG + chr3_2:53344799-53344818 Msa0411190:three_prime_UTR 40.0%
CTAATCCACAATCAACAGTC+AGG - chr3_2:53344807-53344826 None:intergenic 40.0%
GTTGTTCTCTTCAGATTGGA+TGG - chr3_2:53344936-53344955 None:intergenic 40.0%
! ATTTAGTGCAGCCTTTTGGT+TGG + chr3_2:53344975-53344994 Msa0411190:three_prime_UTR 40.0%
!! TTTAGTGCAGCCTTTTGGTT+GGG + chr3_2:53344976-53344995 Msa0411190:three_prime_UTR 40.0%
!! CAGAAAGGTGTCAACTTCAA+AGG - chr3_2:53345108-53345127 None:intergenic 40.0%
!! CTTTGAAGTTGACACCTTTC+TGG + chr3_2:53345106-53345125 Msa0411190:three_prime_UTR 40.0%
GCAAATTACACTTGAGGTGC+TGG + chr3_2:53336626-53336645 Msa0411190:intron 45.0%
GATTTAAACTCAGCACCTCG+AGG - chr3_2:53336679-53336698 None:intergenic 45.0%
! ATTTTACAACCGGCCCGTAA+GGG - chr3_2:53336702-53336721 None:intergenic 45.0%
TTCGATTGAACTGAGTGTGG+TGG + chr3_2:53336995-53337014 Msa0411190:five_prime_UTR 45.0%
AAGCAAGATCAGTATGGGTG+AGG + chr3_2:53337043-53337062 Msa0411190:exon 45.0%
TATGGGTGAGGAAGAAGTAG+TGG + chr3_2:53337055-53337074 Msa0411190:exon 45.0%
TTCAAATGGAGGTAGCGTTC+CGG + chr3_2:53337097-53337116 Msa0411190:CDS 45.0%
TAGCGTTCCGGTGAAATCAT+TGG + chr3_2:53337109-53337128 Msa0411190:CDS 45.0%
AGCGTTCCGGTGAAATCATT+GGG + chr3_2:53337110-53337129 Msa0411190:CDS 45.0%
ACATCCCCCAATGATTTCAC+CGG - chr3_2:53337119-53337138 None:intergenic 45.0%
AACTGATGGAGGGAAAGTCT+TGG + chr3_2:53337160-53337179 Msa0411190:CDS 45.0%
GGGAAAGTCTTGGAGAGTAA+TGG + chr3_2:53337170-53337189 Msa0411190:CDS 45.0%
! GGAGAGTAATGGAGTCAAAG+AGG + chr3_2:53337181-53337200 Msa0411190:CDS 45.0%
! GAAAGTTGAGGGTGTGGAAA+AGG + chr3_2:53337241-53337260 Msa0411190:CDS 45.0%
AGAGGATAAGAAAGCCGATG+GGG + chr3_2:53337307-53337326 Msa0411190:CDS 45.0%
! TTTTACTTCATCGCCCCCAT+CGG - chr3_2:53337324-53337343 None:intergenic 45.0%
GGATAAGAAAGACGATGTGG+TGG + chr3_2:53337448-53337467 Msa0411190:CDS 45.0%
! TGTGGTGGAAGAAGTGAAAG+AGG + chr3_2:53337463-53337482 Msa0411190:CDS 45.0%
AGGGGCTGATGAAGTAAAAG+AGG + chr3_2:53337499-53337518 Msa0411190:CDS 45.0%
TGGGGTGGAAGAAGTAAAAG+AGG + chr3_2:53337535-53337554 Msa0411190:CDS 45.0%
TGGTGCAGATGAAGTAAAGG+TGG + chr3_2:53337571-53337590 Msa0411190:CDS 45.0%
TAGTGTGAAAGAAGCAGTGG+AGG + chr3_2:53337643-53337662 Msa0411190:CDS 45.0%
GGATGTTGATGCTGAGGTTA+AGG + chr3_2:53337739-53337758 Msa0411190:CDS 45.0%
GAAGTAGAGGAGAAGGAAGA+AGG + chr3_2:53337851-53337870 Msa0411190:CDS 45.0%
TGAAGAAGAGACAGAGGAGA+AGG + chr3_2:53337892-53337911 Msa0411190:CDS 45.0%
GGAGAAAACTGAAGCAGAGA+CGG + chr3_2:53337931-53337950 Msa0411190:CDS 45.0%
AGATAAGGCAGAGGGTAGTA+AGG + chr3_2:53338009-53338028 Msa0411190:CDS 45.0%
!! GGATCAAAAAAGCGTTCCAG+AGG + chr3_2:53338040-53338059 Msa0411190:CDS 45.0%
!! AAAAAAGCGTTCCAGAGGGA+AGG + chr3_2:53338045-53338064 Msa0411190:CDS 45.0%
TTCCAGAGGGAAGGTTAATG+AGG + chr3_2:53338054-53338073 Msa0411190:CDS 45.0%
CGATCACTAGTTGGAGTCTT+TGG - chr3_2:53338121-53338140 None:intergenic 45.0%
CTGATTTCCTTTCTCGCACT+GGG - chr3_2:53338144-53338163 None:intergenic 45.0%
! ACTGATTTCCTTTCTCGCAC+TGG - chr3_2:53338145-53338164 None:intergenic 45.0%
CACGACCCTGCAAATTGAAA+GGG - chr3_2:53338306-53338325 None:intergenic 45.0%
!! AAGAGAGGCACCATACCATT+GGG - chr3_2:53338349-53338368 None:intergenic 45.0%
!! AAAGAGAGGCACCATACCAT+TGG - chr3_2:53338350-53338369 None:intergenic 45.0%
CGCACTCAATCTTGTAGTTG+AGG - chr3_2:53338767-53338786 None:intergenic 45.0%
GAATTCTGCGACTATGGTTG+GGG - chr3_2:53338928-53338947 None:intergenic 45.0%
GTGAATTCTGCGACTATGGT+TGG - chr3_2:53338930-53338949 None:intergenic 45.0%
CGTAGTGAATTCTGCGACTA+TGG - chr3_2:53338934-53338953 None:intergenic 45.0%
GTGGCCAGAGAATCATGATT+TGG + chr3_2:53338954-53338973 Msa0411190:intron 45.0%
AATAGCAGAGACCACTTAGC+TGG + chr3_2:53339062-53339081 Msa0411190:intron 45.0%
!!! TCGTTTTGAGACCAGCTAAG+TGG - chr3_2:53339076-53339095 None:intergenic 45.0%
ACGACTTAAATGGGTAACCG+AGG + chr3_2:53339092-53339111 Msa0411190:intron 45.0%
! CCAGCAACATACTTTGGGAA+TGG - chr3_2:53339150-53339169 None:intergenic 45.0%
CCATTCCCAAAGTATGTTGC+TGG + chr3_2:53339147-53339166 Msa0411190:intron 45.0%
! TGCTGTCAACATTTTCAGCG+TGG + chr3_2:53339291-53339310 Msa0411190:intron 45.0%
! GCTGTCAACATTTTCAGCGT+GGG + chr3_2:53339292-53339311 Msa0411190:intron 45.0%
CAGTACGTTATTTGAGTCCG+TGG - chr3_2:53339543-53339562 None:intergenic 45.0%
CAACTCTTGATGTACGTTGG+GGG - chr3_2:53339576-53339595 None:intergenic 45.0%
GCAACTCTTGATGTACGTTG+GGG - chr3_2:53339577-53339596 None:intergenic 45.0%
CGCAACTCTTGATGTACGTT+GGG - chr3_2:53339578-53339597 None:intergenic 45.0%
ACGCAACTCTTGATGTACGT+TGG - chr3_2:53339579-53339598 None:intergenic 45.0%
CAAGAGTTGCGTGATATGTG+GGG + chr3_2:53339587-53339606 Msa0411190:intron 45.0%
AAGAGTTGCGTGATATGTGG+GGG + chr3_2:53339588-53339607 Msa0411190:intron 45.0%
GGTGAAGTTGACCTGATATG+TGG + chr3_2:53339632-53339651 Msa0411190:intron 45.0%
! ACAATCCTCTTTGGAAGGAG+AGG + chr3_2:53339813-53339832 Msa0411190:CDS 45.0%
! CAATCCTCTTTGGAAGGAGA+GGG + chr3_2:53339814-53339833 Msa0411190:CDS 45.0%
TAATCCTTTGCAGGCAGTTC+AGG + chr3_2:53340056-53340075 Msa0411190:intron 45.0%
TTAACAACCTTTGGCCGACA+AGG - chr3_2:53340297-53340316 None:intergenic 45.0%
TGATGAAACATTGCTCCCTC+CGG + chr3_2:53340487-53340506 Msa0411190:intron 45.0%
!!! GGTCATGTATTTTGAGACGG+AGG + chr3_2:53340732-53340751 Msa0411190:intron 45.0%
! ATATGTATGCACAGGGGTAC+AGG + chr3_2:53340794-53340813 Msa0411190:intron 45.0%
! TATGTATGCACAGGGGTACA+GGG + chr3_2:53340795-53340814 Msa0411190:intron 45.0%
!!! TGCTAAGCTGACGGACTTTT+TGG + chr3_2:53340961-53340980 Msa0411190:CDS 45.0%
TGTGGTACTTGCAGACAAAG+AGG + chr3_2:53341006-53341025 Msa0411190:CDS 45.0%
! ATCAGTCAAGCAAGAAGCGT+AGG + chr3_2:53341140-53341159 Msa0411190:intron 45.0%
CTGTAAAACGAGGTACACCA+AGG + chr3_2:53341167-53341186 Msa0411190:CDS 45.0%
GCTAGTACTTCAAGAGGTTC+TGG + chr3_2:53341199-53341218 Msa0411190:CDS 45.0%
ACAGCTGTATGCCACAATTG+TGG - chr3_2:53341450-53341469 None:intergenic 45.0%
TGTGGCATACAGCTGTGTAA+CGG + chr3_2:53341454-53341473 Msa0411190:intron 45.0%
CAAAGGCCATCTGCATAGTA+CGG - chr3_2:53341485-53341504 None:intergenic 45.0%
!!! CTGTGTTTTGGCTGCAATTC+AGG - chr3_2:53341535-53341554 None:intergenic 45.0%
!! CAGTGTAGTGGGTAGAAGTA+TGG - chr3_2:53341893-53341912 None:intergenic 45.0%
CATGCACCGTTGTCCAATTA+TGG - chr3_2:53342497-53342516 None:intergenic 45.0%
GCGAGATTTATTTGTGACCG+TGG - chr3_2:53343145-53343164 None:intergenic 45.0%
TTCTTAGGTGCTCTCTTAGG+TGG - chr3_2:53343174-53343193 None:intergenic 45.0%
GAGGAAGACTTAGTTGGAGT+TGG - chr3_2:53343303-53343322 None:intergenic 45.0%
TCACGCAACTGATCATCTGT+GGG - chr3_2:53343615-53343634 None:intergenic 45.0%
ATCACGCAACTGATCATCTG+TGG - chr3_2:53343616-53343635 None:intergenic 45.0%
TTCACCATAGTATGGGAGAC+TGG - chr3_2:53344476-53344495 None:intergenic 45.0%
TCCCATACTATGGTGAACCA+AGG + chr3_2:53344479-53344498 Msa0411190:intron 45.0%
GTGAACCAAGGTTCAAACGT+CGG + chr3_2:53344491-53344510 Msa0411190:intron 45.0%
GCTCATGATTCAGAAAGAGC+TGG + chr3_2:53344696-53344715 Msa0411190:CDS 45.0%
ATCCTCCTCTTCATCTTCCT+CGG - chr3_2:53344749-53344768 None:intergenic 45.0%
ATGCCGAGAAAGATGAAGAC+CGG + chr3_2:53344767-53344786 Msa0411190:CDS 45.0%
AGACCGGTCTTCATCTTTCT+CGG - chr3_2:53344773-53344792 None:intergenic 45.0%
!! ATATCATATAAAATATTTAA+AGG + chr3_2:53340186-53340205 Msa0411190:intron 5.0%
GTTTAAATCCCCTTACGGGC+CGG + chr3_2:53336690-53336709 Msa0411190:intron 50.0%
! TTTTACAACCGGCCCGTAAG+GGG - chr3_2:53336701-53336720 None:intergenic 50.0%
! CATTTTACAACCGGCCCGTA+AGG - chr3_2:53336703-53336722 None:intergenic 50.0%
GCGTTCCGGTGAAATCATTG+GGG + chr3_2:53337111-53337130 Msa0411190:CDS 50.0%
CGTTCCGGTGAAATCATTGG+GGG + chr3_2:53337112-53337131 Msa0411190:CDS 50.0%
! GGGTGTGGAAAAGGTACAAG+AGG + chr3_2:53337250-53337269 Msa0411190:CDS 50.0%
TGGGGTGGGAGAAGTAAAAG+AGG + chr3_2:53337289-53337308 Msa0411190:CDS 50.0%
GAGGATAAGAAAGCCGATGG+GGG + chr3_2:53337308-53337327 Msa0411190:CDS 50.0%
TGGGGGCGATGAAGTAAAAG+AGG + chr3_2:53337325-53337344 Msa0411190:CDS 50.0%
!! GGAGAAGAAAGATGATGGGG+TGG + chr3_2:53337520-53337539 Msa0411190:CDS 50.0%
AGATGCAGAGGGTAGCATTG+AGG + chr3_2:53337796-53337815 Msa0411190:CDS 50.0%
AGAGACAGAGGAGAAGGAAG+AGG + chr3_2:53337898-53337917 Msa0411190:CDS 50.0%
GAGACAGAGGAGAAGGAAGA+GGG + chr3_2:53337899-53337918 Msa0411190:CDS 50.0%
GAAGGAAGAGGGCGATGAAA+AGG + chr3_2:53337910-53337929 Msa0411190:CDS 50.0%
GAAAACTGAAGCAGAGACGG+AGG + chr3_2:53337934-53337953 Msa0411190:CDS 50.0%
GAGGGTAGTAAGGCTGAGAA+AGG + chr3_2:53338019-53338038 Msa0411190:CDS 50.0%
CTCCTCATTAACCTTCCCTC+TGG - chr3_2:53338059-53338078 None:intergenic 50.0%
! CTAGTTGGAGTCTTTGGCTC+TGG - chr3_2:53338115-53338134 None:intergenic 50.0%
CCACGACCCTGCAAATTGAA+AGG - chr3_2:53338307-53338326 None:intergenic 50.0%
CCTTTCAATTTGCAGGGTCG+TGG + chr3_2:53338304-53338323 Msa0411190:intron 50.0%
AAGATTGAGTGCGGTGTACG+TGG + chr3_2:53338774-53338793 Msa0411190:intron 50.0%
AGTCGCAGAATTCACTACGG+TGG + chr3_2:53338935-53338954 Msa0411190:intron 50.0%
ACGTGGGACTAATGCAACTG+TGG + chr3_2:53339229-53339248 Msa0411190:intron 50.0%
CGTGGGACTAATGCAACTGT+GGG + chr3_2:53339230-53339249 Msa0411190:intron 50.0%
TTGACCTGAACTGCCTGCAA+AGG - chr3_2:53340063-53340082 None:intergenic 50.0%
TTTGAGTCCTTGTCGGCCAA+AGG + chr3_2:53340287-53340306 Msa0411190:intron 50.0%
! ATGTATGCACAGGGGTACAG+GGG + chr3_2:53340796-53340815 Msa0411190:intron 50.0%
CACAGTTGTGGTTGCATGAG+GGG - chr3_2:53340990-53341009 None:intergenic 50.0%
CCACAGTTGTGGTTGCATGA+GGG - chr3_2:53340991-53341010 None:intergenic 50.0%
ACCACAGTTGTGGTTGCATG+AGG - chr3_2:53340992-53341011 None:intergenic 50.0%
GTCTGCAAGTACCACAGTTG+TGG - chr3_2:53341002-53341021 None:intergenic 50.0%
! AGTCAAGCAAGAAGCGTAGG+CGG + chr3_2:53341143-53341162 Msa0411190:intron 50.0%
AAACGAGGTACACCAAGGTC+TGG + chr3_2:53341172-53341191 Msa0411190:CDS 50.0%
GTTGTCCTCCCATGAATTCC+AGG + chr3_2:53341334-53341353 Msa0411190:intron 50.0%
GAGCATCCGTACTATGCAGA+TGG + chr3_2:53341476-53341495 Msa0411190:intron 50.0%
CTATGCAGATGGCCTTTGCA+TGG + chr3_2:53341487-53341506 Msa0411190:intron 50.0%
! TGGCCTTTGCATGGCGTTTT+AGG + chr3_2:53341496-53341515 Msa0411190:intron 50.0%
! GGCCTTTGCATGGCGTTTTA+GGG + chr3_2:53341497-53341516 Msa0411190:intron 50.0%
AGCCCTAAAACGCCATGCAA+AGG - chr3_2:53341502-53341521 None:intergenic 50.0%
TACCAGTTCAATCTACGGCC+CGG - chr3_2:53341761-53341780 None:intergenic 50.0%
CTTCTACCCACTACACTGCA+TGG + chr3_2:53341895-53341914 Msa0411190:intron 50.0%
! CTTTTCACTCGGTAGGTGAG+AGG - chr3_2:53341954-53341973 None:intergenic 50.0%
GAAAGGGGAAAGTGGTCACT+GGG - chr3_2:53342254-53342273 None:intergenic 50.0%
AGAGGAAGGAAAGGGGAAAG+TGG - chr3_2:53342262-53342281 None:intergenic 50.0%
CTATGAGCTACTCCCTCCAA+TGG - chr3_2:53342438-53342457 None:intergenic 50.0%
CATTGGAGGGAGTAGCTCAT+AGG + chr3_2:53342436-53342455 Msa0411190:intron 50.0%
GGGAGTAGCTCATAGGAACA+AGG + chr3_2:53342443-53342462 Msa0411190:intron 50.0%
TCTGCAAAGAAAGAGTCCGC+CGG + chr3_2:53343099-53343118 Msa0411190:CDS 50.0%
! CTCAGTTTTGCTTCTTCCGG+CGG - chr3_2:53343118-53343137 None:intergenic 50.0%
TTAGGTGCTCTCTTAGGTGG+TGG - chr3_2:53343171-53343190 None:intergenic 50.0%
CTGATCATCTGTGGGACTTG+AGG - chr3_2:53343607-53343626 None:intergenic 50.0%
AACAACGCCCCAGTCAATGA+AGG - chr3_2:53343772-53343791 None:intergenic 50.0%
!! TTCATTGACTGGGGCGTTGT+TGG + chr3_2:53343771-53343790 Msa0411190:intron 50.0%
ACGTCTTGACCAACCAAGGT+TGG + chr3_2:53344437-53344456 Msa0411190:intron 50.0%
CGTCTTGACCAACCAAGGTT+GGG + chr3_2:53344438-53344457 Msa0411190:intron 50.0%
AAGCTAGACCCAACCTTGGT+TGG - chr3_2:53344449-53344468 None:intergenic 50.0%
AACCAAGGTTGGGTCTAGCT+TGG + chr3_2:53344448-53344467 Msa0411190:intron 50.0%
! ACCAAGGTTGGGTCTAGCTT+GGG + chr3_2:53344449-53344468 Msa0411190:intron 50.0%
ACCAAGGTTCAAACGTCGGT+TGG + chr3_2:53344495-53344514 Msa0411190:intron 50.0%
! CCAAGGTTCAAACGTCGGTT+GGG + chr3_2:53344496-53344515 Msa0411190:intron 50.0%
TGAAGAAGCAGATGAGTCCG+AGG + chr3_2:53344729-53344748 Msa0411190:CDS 50.0%
TGAGTCCGAGGAAGATGAAG+AGG + chr3_2:53344741-53344760 Msa0411190:CDS 50.0%
AACTGAAGCAGAGACGGAGG+AGG + chr3_2:53337937-53337956 Msa0411190:CDS 55.0%
CCTTCCCTCTCCTTCCAAAG+AGG - chr3_2:53339821-53339840 None:intergenic 55.0%
! CCTCTTTGGAAGGAGAGGGA+AGG + chr3_2:53339818-53339837 Msa0411190:CDS 55.0%
CCCTCATGCAACCACAACTG+TGG + chr3_2:53340988-53341007 Msa0411190:CDS 55.0%
!! CGTAGGCGGACTGTAAAACG+AGG + chr3_2:53341157-53341176 Msa0411190:CDS 55.0%
GAGGTACACCAAGGTCTGGT+GGG + chr3_2:53341176-53341195 Msa0411190:CDS 55.0%
AGGTACACCAAGGTCTGGTG+GGG + chr3_2:53341177-53341196 Msa0411190:CDS 55.0%
! GGTGGGGCTAGTACTTCAAG+AGG + chr3_2:53341193-53341212 Msa0411190:CDS 55.0%
CATCGCAGTAGTAGCTGGTC+TGG - chr3_2:53341579-53341598 None:intergenic 55.0%
CAGACCAGCTACTACTGCGA+TGG + chr3_2:53341577-53341596 Msa0411190:intron 55.0%
TGTGCCATCGCAGTAGTAGC+TGG - chr3_2:53341584-53341603 None:intergenic 55.0%
AACCGGGCCGTAGATTGAAC+TGG + chr3_2:53341756-53341775 Msa0411190:intron 55.0%
GCAGAGCCATGCAGTGTAGT+GGG - chr3_2:53341904-53341923 None:intergenic 55.0%
AGCAGAGCCATGCAGTGTAG+TGG - chr3_2:53341905-53341924 None:intergenic 55.0%
GGAAAGGGGAAAGTGGTCAC+TGG - chr3_2:53342255-53342274 None:intergenic 55.0%
GAGCTACTCCCTCCAATGGT+TGG - chr3_2:53342434-53342453 None:intergenic 55.0%
TGACAACAGGGGAGAGCTCA+TGG - chr3_2:53343353-53343372 None:intergenic 55.0%
!! ATTGACTGGGGCGTTGTTGG+TGG + chr3_2:53343774-53343793 Msa0411190:intron 55.0%
! CCAAGGTTGGGTCTAGCTTG+GGG + chr3_2:53344450-53344469 Msa0411190:intron 55.0%
CCCAACCGACGTTTGAACCT+TGG - chr3_2:53344499-53344518 None:intergenic 55.0%
GTCCGAGGAAGATGAAGAGG+AGG + chr3_2:53344744-53344763 Msa0411190:CDS 55.0%
!! GTGCAGCCTTTTGGTTGGGT+TGG + chr3_2:53344980-53344999 Msa0411190:three_prime_UTR 55.0%
TGGCAGCCAACCCAACCAAA+AGG - chr3_2:53344989-53345008 None:intergenic 55.0%
TGAAGCAGAGACGGAGGAGG+AGG + chr3_2:53337940-53337959 Msa0411190:CDS 60.0%
CGCACTGGGCGATCACTAGT+TGG - chr3_2:53338130-53338149 None:intergenic 60.0%
GTGATCGCCCAGTGCGAGAA+AGG + chr3_2:53338134-53338153 Msa0411190:CDS 60.0%
CGAGGTACACCAAGGTCTGG+TGG + chr3_2:53341175-53341194 Msa0411190:CDS 60.0%
GTACTAGCCCCACCAGACCT+TGG - chr3_2:53341187-53341206 None:intergenic 60.0%
!!! GCATGGCGTTTTAGGGCTGC+AGG + chr3_2:53341504-53341523 Msa0411190:intron 60.0%
! ATGGCTCTGCTGTCCGCAAC+TGG + chr3_2:53341914-53341933 Msa0411190:intron 60.0%
GGGGAAAGTGGTCACTGGGA+GGG - chr3_2:53342250-53342269 None:intergenic 60.0%
AGGGGAAAGTGGTCACTGGG+AGG - chr3_2:53342251-53342270 None:intergenic 60.0%
CCCCAAGCTAGACCCAACCT+TGG - chr3_2:53344453-53344472 None:intergenic 60.0%
GGGGCCAGTCTCCCATACTA+TGG + chr3_2:53344469-53344488 Msa0411190:intron 60.0%
AGCAGAGACGGAGGAGGAGG+AGG + chr3_2:53337943-53337962 Msa0411190:CDS 65.0%
AGAGACGGAGGAGGAGGAGG+AGG + chr3_2:53337946-53337965 Msa0411190:CDS 65.0%
AGTGCGGTGTACGTGGCTGC+CGG + chr3_2:53338781-53338800 Msa0411190:intron 65.0%
CTGCCGGCATACGCTGTTGC+TGG + chr3_2:53338797-53338816 Msa0411190:intron 65.0%
CCGCCAGCAACAGCGTATGC+CGG - chr3_2:53338803-53338822 None:intergenic 65.0%
CCGGCATACGCTGTTGCTGG+CGG + chr3_2:53338800-53338819 Msa0411190:intron 65.0%
GCATACGCTGTTGCTGGCGG+TGG + chr3_2:53338803-53338822 Msa0411190:intron 65.0%
!! GACTGGGGCGTTGTTGGTGG+TGG + chr3_2:53343777-53343796 Msa0411190:intron 65.0%
GACGGAGGAGGAGGAGGAGG+AGG + chr3_2:53337949-53337968 Msa0411190:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr3_2:53337952-53337971 Msa0411190:CDS 70.0%
GGAGGAGGAGGAGGACGACG+AGG + chr3_2:53337961-53337980 Msa0411190:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 53336083 53345175 53336083 ID=Msa0411190;Name=Msa0411190
chr3_2 mRNA 53336083 53345175 53336083 ID=Msa0411190-mRNA-1;Parent=Msa0411190;Name=Msa0411190-mRNA-1;_AED=0.07;_eAED=0.07;_QI=160|0.9|1|1|0.8|0.81|11|380|753
chr3_2 exon 53336083 53336178 53336083 ID=Msa0411190-mRNA-1:exon:10619;Parent=Msa0411190-mRNA-1
chr3_2 exon 53336992 53338222 53336992 ID=Msa0411190-mRNA-1:exon:10620;Parent=Msa0411190-mRNA-1
chr3_2 exon 53338319 53338352 53338319 ID=Msa0411190-mRNA-1:exon:10621;Parent=Msa0411190-mRNA-1
chr3_2 exon 53339760 53339839 53339760 ID=Msa0411190-mRNA-1:exon:10622;Parent=Msa0411190-mRNA-1
chr3_2 exon 53340069 53340128 53340069 ID=Msa0411190-mRNA-1:exon:10623;Parent=Msa0411190-mRNA-1
chr3_2 exon 53340950 53341027 53340950 ID=Msa0411190-mRNA-1:exon:10624;Parent=Msa0411190-mRNA-1
chr3_2 exon 53341145 53341225 53341145 ID=Msa0411190-mRNA-1:exon:10625;Parent=Msa0411190-mRNA-1
chr3_2 exon 53342868 53343342 53342868 ID=Msa0411190-mRNA-1:exon:10626;Parent=Msa0411190-mRNA-1
chr3_2 exon 53343565 53343674 53343565 ID=Msa0411190-mRNA-1:exon:10627;Parent=Msa0411190-mRNA-1
chr3_2 exon 53343869 53343899 53343869 ID=Msa0411190-mRNA-1:exon:10628;Parent=Msa0411190-mRNA-1
chr3_2 exon 53344650 53345175 53344650 ID=Msa0411190-mRNA-1:exon:10629;Parent=Msa0411190-mRNA-1
chr3_2 five_prime_UTR 53336083 53336178 53336083 ID=Msa0411190-mRNA-1:five_prime_utr;Parent=Msa0411190-mRNA-1
chr3_2 five_prime_UTR 53336992 53337055 53336992 ID=Msa0411190-mRNA-1:five_prime_utr;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53337056 53338222 53337056 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53338319 53338352 53338319 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53339760 53339839 53339760 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53340069 53340128 53340069 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53340950 53341027 53340950 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53341145 53341225 53341145 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53342868 53343342 53342868 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53343565 53343674 53343565 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53343869 53343899 53343869 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 CDS 53344650 53344795 53344650 ID=Msa0411190-mRNA-1:cds;Parent=Msa0411190-mRNA-1
chr3_2 three_prime_UTR 53344796 53345175 53344796 ID=Msa0411190-mRNA-1:three_prime_utr;Parent=Msa0411190-mRNA-1
Gene Sequence

>Msa0411190

ATGGGTGAGGAAGAAGTAGTGGCTGAAGTTTCTAAGACTGATTCAAATGGAGGTAGCGTTCCGGTGAAATCATTGGGGGATGTTGTTGAGAAGAAAGACTTGGAAACTGATGGAGGGAAAGTCTTGGAGAGTAATGGAGTCAAAGAGGTGAAAGAAAATGATGTAAAAGAAATTGAAGAAGATAAGAAAGTTGAGGGTGTGGAAAAGGTACAAGAGGATAAGAAAGATGAAGATGGGGTGGGAGAAGTAAAAGAGGATAAGAAAGCCGATGGGGGCGATGAAGTAAAAGAGGATAAGAAAAATGATGGAGTGGAAGAAGTAAAAGATGAAAAGAAAGACAATGTAGCTGAAGTAAAAGAGGATAAGAAAGATGATGTGGTAAAAGTAAAAGAGGATAAGAAAGACGATGTGGTGGAAGAAGTGAAAGAGGAGAAGAAAGATGAAGGGGCTGATGAAGTAAAAGAGGAGAAGAAAGATGATGGGGTGGAAGAAGTAAAAGAGGATAAGGAAGTTGATGGTGCAGATGAAGTAAAGGTGGAAAAGAAAGATAATGAGGGGGAAGAAGTAAAAGATGATATGGAAGTTGATAGTGTGAAAGAAGCAGTGGAGGATAAGAATGATGATGACATCCAAGAAATGGAAGAGGATGACAAAAATGTTCCTGAATCTGAGAATGAGAAAATGGATGTTGATGCTGAGGTTAAGGAAACTACAGAAGATAAAGAAGAAAAGGAAAAAGAAGATGCAGAGGGTAGCATTGAGGAGAAAGAAGAGGGTAATGATGAGGAGAAAACTGAAGTAGAGGAGAAGGAAGAAGGCGATGACAATGAGAAATCTGAAGAAGAGACAGAGGAGAAGGAAGAGGGCGATGAAAAGGAGAAAACTGAAGCAGAGACGGAGGAGGAGGAGGAGGAGGAGGACGACGAGGATACTATTGATAAATCAAAAGAAGAAGATAAGGCAGAGGGTAGTAAGGCTGAGAAAGGATCAAAAAAGCGTTCCAGAGGGAAGGTTAATGAGGAGAAAGTGAAAGACAAAAAGAAGGAACTGAAGCAGCCAGAGCCAAAGACTCCAACTAGTGATCGCCCAGTGCGAGAAAGGAAATCAGTTGAGAGATTGGTAGCATTAATCGATAAAGATGCAACCAAGGAATTACACATTGCAAAGGGTCGTGGCACACCTTTAAAAGATATACCCAATGTGGCATTTAAGTTATCCAGAAGGAAGACTGATGATAGTCTCAAGTTGTTCCATACAATCCTCTTTGGAAGGAGAGGGAAGGCAGTTCAGGTCAAGAGTAATATATTGAGGTTTTCTGGTTTTGTATGGCATGACAATGAGGAAGATATTATTGCTAAGCTGACGGACTTTTTGGTTGCCCCTCATGCAACCACAACTGTGGTACTTGCAGACAAAGAGTCAAGCAAGAAGCGTAGGCGGACTGTAAAACGAGGTACACCAAGGTCTGGTGGGGCTAGTACTTCAAGAGGTTCTGGAAAGAGGCAGAAGAAAAATGAAGATTCTTCAGGAGTGGAGAAGAAGAGCACAACTGACACAGAAGATGAATCAGAGGGAGAAGAGAAAAATGAAGAAAATGAGGATGAACCTGAAAATGATATTCCTGAGAAATCTGATGATGAAACGCCACAGAAATCTGAAAGGGAAGATAAGAGTGATTCTGGGAGTGAATCTGAAGATGTGAAAAAAAGGAAAAGACCTTCCAAAACATCATCTGCAAAGAAAGAGTCCGCCGGAAGAAGCAAAACTGAGAAAACCACGGTCACAAATAAATCTCGCTCACCACCACCTAAGAGAGCACCTAAGAAATCATCAAATACCAAACCAAAGTCCGATGATGATATTGATGAAAGTCCAAAGGTATTTTCTAGGAAGAAGAAAAGTGAGCAAGGGGGAAAGCAGAAGATATCAACTCCAACTCCAACTAAGTCTTCCTCAAAGTCCAAAGAGAAAGCTGAAAAGGTTACTAAGGGAAAAGGCAAGAAGAAAGTGACATCCTCAAGTCCCACAGATGATCAGTTGCGTGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCCACATTTACCGACATTCTGAAACTACTTGCTAACAAATTTGATGTGGATCTCACCCCAAAAAAGTCAGCTATCAAGCTCATGATTCAGAAAGAGCTGGCAAGACTTGCTGAAGAAGCAGATGAGTCCGAGGAAGATGAAGAGGAGGATGCCGAGAAAGATGAAGACCGGTCTTAA
Protein sequence

>Msa0411190

MGEEEVVAEVSKTDSNGGSVPVKSLGDVVEKKDLETDGGKVLESNGVKEVKENDVKEIEEDKKVEGVEKVQEDKKDEDGVGEVKEDKKADGGDEVKEDKKNDGVEEVKDEKKDNVAEVKEDKKDDVVKVKEDKKDDVVEEVKEEKKDEGADEVKEEKKDDGVEEVKEDKEVDGADEVKVEKKDNEGEEVKDDMEVDSVKEAVEDKNDDDIQEMEEDDKNVPESENEKMDVDAEVKETTEDKEEKEKEDAEGSIEEKEEGNDEEKTEVEEKEEGDDNEKSEEETEEKEEGDEKEKTEAETEEEEEEEDDEDTIDKSKEEDKAEGSKAEKGSKKRSRGKVNEEKVKDKKKELKQPEPKTPTSDRPVRERKSVERLVALIDKDATKELHIAKGRGTPLKDIPNVAFKLSRRKTDDSLKLFHTILFGRRGKAVQVKSNILRFSGFVWHDNEEDIIAKLTDFLVAPHATTTVVLADKESSKKRRRTVKRGTPRSGGASTSRGSGKRQKKNEDSSGVEKKSTTDTEDESEGEEKNEENEDEPENDIPEKSDDETPQKSEREDKSDSGSESEDVKKRKRPSKTSSAKKESAGRSKTEKTTVTNKSRSPPPKRAPKKSSNTKPKSDDDIDESPKVFSRKKKSEQGGKQKISTPTPTKSSSKSKEKAEKVTKGKGKKKVTSSSPTDDQLRDAICEILKEVDFNTATFTDILKLLANKFDVDLTPKKSAIKLMIQKELARLAEEADESEEDEEEDAEKDEDRS*