AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1186060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186060 MtrunA17_Chr8g0352361 98.389 869 12 1 18 884 19 887 0.0 1758
Msa1186060 MtrunA17_Chr2g0296421 81.795 791 127 8 109 884 248 1036 0.0 1311
Msa1186060 MtrunA17_Chr2g0296421 55.128 156 56 3 10 154 5 157 2.94e-39 157
Msa1186060 MtrunA17_Chr1g0191141 31.495 689 393 19 232 849 378 1058 1.36e-90 311
Msa1186060 MtrunA17_Chr7g0224051 31.503 692 392 19 234 849 387 1072 4.51e-88 305
Msa1186060 MtrunA17_Chr3g0114161 30.460 696 393 18 233 849 520 1203 7.73e-87 302
Msa1186060 MtrunA17_Chr7g0225791 31.040 625 365 11 279 849 628 1240 3.48e-85 298
Msa1186060 MtrunA17_Chr5g0437621 30.737 706 392 22 225 849 570 1259 4.04e-82 289
Msa1186060 MtrunA17_Chr7g0233021 31.669 641 347 21 279 849 567 1186 1.62e-81 287
Msa1186060 MtrunA17_Chr4g0047081 30.696 632 358 15 279 849 578 1190 1.31e-80 284
Msa1186060 MtrunA17_Chr7g0232971 29.308 679 382 18 247 849 596 1252 1.59e-78 279
Msa1186060 MtrunA17_Chr7g0233031 29.480 692 370 24 242 849 542 1199 3.75e-74 266
Msa1186060 MtrunA17_Chr7g0233001 31.818 484 287 9 398 849 3 475 3.34e-68 236
Msa1186060 MtrunA17_Chr7g0232991 29.803 557 307 14 360 849 75 614 4.42e-65 231
Msa1186060 MtrunA17_Chr2g0320781 37.768 233 135 7 609 835 5 233 1.54e-35 135
Msa1186060 MtrunA17_Chr4g0052341 24.610 577 339 22 360 907 747 1256 6.33e-32 135
Msa1186060 MtrunA17_Chr3g0137091 25.000 576 349 20 306 847 232 758 8.28e-31 131
Msa1186060 MtrunA17_Chr5g0393461 25.000 548 332 16 346 847 172 686 4.31e-30 128
Msa1186060 MtrunA17_Chr8g0384531 25.520 529 315 17 351 833 377 872 3.31e-27 119
Msa1186060 MtrunA17_Chr1g0190391 27.570 214 143 3 352 553 576 789 3.48e-26 115
Msa1186060 MtrunA17_Chr1g0163011 23.178 535 341 19 358 841 195 710 2.05e-25 113
Msa1186060 MtrunA17_Chr5g0394201 24.536 485 321 17 354 832 359 804 4.73e-25 112
Msa1186060 MtrunA17_Chr1g0183681 25.651 499 310 17 379 845 410 879 1.02e-24 111
Msa1186060 MtrunA17_Chr1g0205891 24.746 493 311 19 354 832 372 818 2.10e-24 110
Msa1186060 MtrunA17_Chr5g0442141 25.540 509 293 16 355 833 614 1066 2.18e-24 110
Msa1186060 MtrunA17_Chr4g0066651 24.407 590 341 25 320 870 959 1482 1.56e-21 101
Msa1186060 MtrunA17_Chr3g0095091 24.558 509 298 17 355 833 568 1020 2.97e-21 100
Msa1186060 MtrunA17_Chr5g0403921 23.265 533 333 17 355 859 181 665 9.05e-21 98.2
Msa1186060 MtrunA17_Chr7g0248031 24.561 513 290 22 355 826 991 1447 5.53e-18 90.1
Msa1186060 MtrunA17_Chr4g0040301 32.407 216 124 9 710 913 394 599 6.25e-18 89.0
Msa1186060 MtrunA17_Chr1g0190381 35.570 149 87 2 703 842 195 343 6.60e-17 85.1
Msa1186060 MtrunA17_Chr7g0232121 22.262 557 356 22 358 881 39 551 5.51e-15 79.7
Msa1186060 MtrunA17_Chr8g0348721 23.307 502 309 23 355 826 984 1439 1.18e-14 79.0
Msa1186060 MtrunA17_Chr1g0175191 34.109 129 80 1 704 832 1070 1193 1.61e-14 78.6
Msa1186060 MtrunA17_Chr1g0168031 33.103 145 92 2 698 842 989 1128 5.41e-13 73.6
Msa1186060 MtrunA17_Chr7g0224021 37.500 88 42 2 352 428 25 110 1.15e-12 65.9
Msa1186060 MtrunA17_Chr2g0281601 36.585 123 73 2 710 832 1146 1263 4.11e-12 70.5
Msa1186060 MtrunA17_Chr1g0212331 33.333 126 78 3 708 832 880 1000 1.81e-11 68.6
Msa1186060 MtrunA17_Chr7g0255821 36.220 127 74 3 709 833 663 784 3.32e-11 67.4
Msa1186060 MtrunA17_Chr2g0320751 34.351 131 79 3 703 832 857 981 4.91e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186060 AT2G16390.2 57.077 862 342 11 38 884 37 885 0.0 972
Msa1186060 AT2G16390.1 57.077 862 342 11 38 884 34 882 0.0 972
Msa1186060 AT2G21450.1 54.098 671 283 6 239 889 148 813 0.0 743
Msa1186060 AT2G21450.3 54.098 671 283 6 239 889 57 722 0.0 743
Msa1186060 AT2G21450.2 54.098 671 283 6 239 889 155 820 0.0 742
Msa1186060 AT1G05490.1 31.339 702 379 20 229 849 674 1353 8.63e-88 307
Msa1186060 AT3G24340.1 30.758 660 374 17 242 849 453 1081 5.84e-82 288
Msa1186060 AT3G42670.2 29.185 675 410 15 240 849 539 1210 3.44e-79 281
Msa1186060 AT3G42670.3 29.185 675 410 15 240 849 539 1210 3.44e-79 281
Msa1186060 AT3G42670.1 29.185 675 410 15 240 849 539 1210 3.44e-79 281
Msa1186060 AT3G42670.4 28.951 677 411 15 240 849 539 1212 9.17e-79 280
Msa1186060 AT5G20420.1 28.994 676 411 15 247 857 552 1223 2.48e-77 275
Msa1186060 AT3G32330.1 39.359 343 173 3 336 673 1 313 3.21e-71 239
Msa1186060 AT3G32280.1 35.145 276 130 2 277 552 248 474 8.94e-51 186
Msa1186060 AT1G08600.4 27.051 573 322 17 352 842 712 1270 5.38e-48 186
Msa1186060 AT1G08600.3 27.051 573 322 17 352 842 712 1270 5.38e-48 186
Msa1186060 AT1G08600.2 27.051 573 322 17 352 842 712 1270 5.38e-48 186
Msa1186060 AT1G08600.1 26.620 571 306 18 352 842 712 1249 4.33e-41 164
Msa1186060 AT3G31900.1 32.014 278 129 5 277 554 153 370 5.57e-38 147
Msa1186060 AT5G44800.1 25.285 526 315 18 361 861 692 1164 4.12e-32 136
Msa1186060 AT5G63950.1 27.011 522 307 19 355 833 374 864 1.27e-28 124
Msa1186060 AT5G63950.2 26.408 515 302 18 355 833 374 847 1.18e-27 121
Msa1186060 AT2G13370.1 25.400 500 297 15 358 833 625 1072 7.16e-26 115
Msa1186060 AT2G13370.2 25.400 500 297 15 358 833 625 1072 7.16e-26 115
Msa1186060 AT2G13370.3 25.400 500 297 15 358 833 625 1072 7.16e-26 115
Msa1186060 AT4G31900.2 25.048 519 308 18 358 857 184 640 2.70e-25 114
Msa1186060 AT4G31900.3 25.048 519 308 18 358 857 225 681 3.05e-25 113
Msa1186060 AT4G31900.1 25.048 519 308 18 358 857 225 681 3.60e-25 113
Msa1186060 AT2G25170.1 23.211 517 323 16 358 847 273 742 3.90e-24 110
Msa1186060 AT2G25170.4 23.211 517 323 16 358 847 273 742 3.90e-24 110
Msa1186060 AT2G25170.3 23.211 517 323 16 358 847 299 768 5.69e-24 109
Msa1186060 AT2G25170.2 23.211 517 323 16 358 847 290 759 5.86e-24 109
Msa1186060 AT2G28290.6 25.047 535 335 21 355 865 752 1244 5.33e-22 103
Msa1186060 AT2G28290.2 25.047 535 335 21 355 865 751 1243 5.66e-22 103
Msa1186060 AT2G02090.1 23.443 546 326 22 358 841 213 728 5.86e-22 102
Msa1186060 AT2G28290.3 25.047 535 335 21 355 865 751 1243 5.91e-22 103
Msa1186060 AT2G28290.4 25.047 535 335 21 355 865 751 1243 5.91e-22 103
Msa1186060 AT2G28290.1 25.047 535 335 21 355 865 751 1243 5.96e-22 103
Msa1186060 AT2G28290.5 25.047 535 335 21 355 865 752 1244 6.07e-22 103
Msa1186060 AT2G18760.3 24.798 496 316 15 379 845 463 930 9.26e-22 102
Msa1186060 AT2G18760.4 25.000 496 315 16 379 845 404 871 1.40e-21 101
Msa1186060 AT2G18760.1 25.000 496 315 16 379 845 404 871 1.40e-21 101
Msa1186060 AT2G18760.2 25.000 496 315 16 379 845 404 871 1.40e-21 101
Msa1186060 AT2G18760.7 25.000 496 315 16 379 845 404 871 1.40e-21 101
Msa1186060 AT2G18760.5 25.000 496 315 16 379 845 404 871 1.40e-21 101
Msa1186060 AT2G18760.6 25.000 496 315 16 379 845 404 871 1.40e-21 101
Msa1186060 AT3G06400.2 24.699 498 308 17 357 841 188 631 2.69e-20 97.4
Msa1186060 AT3G06400.1 24.699 498 308 17 357 841 188 631 2.79e-20 97.4
Msa1186060 AT3G06400.3 24.699 498 308 17 357 841 188 631 3.28e-20 97.4
Msa1186060 AT5G66750.1 23.897 544 370 17 301 831 143 655 1.37e-19 94.7
Msa1186060 AT3G19210.3 30.131 229 132 6 339 553 159 373 1.49e-18 91.7
Msa1186060 AT3G19210.3 27.211 147 101 2 702 847 541 682 2.68e-11 68.2
Msa1186060 AT3G19210.2 30.131 229 132 6 339 553 159 373 2.36e-18 91.3
Msa1186060 AT3G19210.2 27.211 147 101 2 702 847 539 680 1.98e-11 68.6
Msa1186060 AT3G19210.1 30.131 229 132 6 339 553 159 373 2.58e-18 90.9
Msa1186060 AT3G19210.1 27.211 147 101 2 702 847 541 682 1.90e-11 68.6
Msa1186060 AT2G46020.5 24.502 502 305 19 354 826 977 1433 3.15e-18 91.3
Msa1186060 AT2G46020.1 24.502 502 305 19 354 826 977 1433 3.15e-18 91.3
Msa1186060 AT2G46020.6 24.502 502 305 19 354 826 977 1433 3.15e-18 91.3
Msa1186060 AT2G46020.2 23.969 509 300 19 354 826 977 1434 5.24e-18 90.5
Msa1186060 AT2G46020.3 23.969 509 300 19 354 826 977 1434 5.24e-18 90.5
Msa1186060 AT2G46020.4 23.969 509 300 19 354 826 977 1434 5.24e-18 90.5
Msa1186060 AT1G03750.1 40.650 123 68 2 710 832 542 659 3.87e-17 87.0
Msa1186060 AT1G03750.1 26.961 204 118 6 361 553 142 325 5.66e-12 70.5
Msa1186060 AT5G43530.1 36.364 132 79 2 711 842 1126 1252 5.58e-15 80.5
Msa1186060 AT3G12810.1 30.464 151 100 1 704 854 1083 1228 5.36e-14 77.4
Msa1186060 AT3G12810.2 30.464 151 100 1 704 854 1079 1224 5.45e-14 77.4
Msa1186060 AT1G61140.3 35.246 122 74 1 711 832 964 1080 3.09e-12 71.2
Msa1186060 AT1G61140.1 35.246 122 74 1 711 832 1122 1238 3.20e-12 71.2
Msa1186060 AT1G11100.5 35.246 122 74 2 711 832 927 1043 3.77e-12 71.2
Msa1186060 AT1G11100.3 35.246 122 74 2 711 832 971 1087 4.13e-12 70.9
Msa1186060 AT1G11100.1 35.246 122 74 2 711 832 1070 1186 4.66e-12 70.9
Msa1186060 AT1G11100.2 35.246 122 74 2 711 832 1113 1229 5.26e-12 70.9
Msa1186060 AT1G11100.4 35.246 122 74 2 711 832 1114 1230 5.26e-12 70.9
Msa1186060 AT5G05130.1 33.544 158 96 4 709 863 722 873 2.20e-11 68.6

Find 222 sgRNAs with CRISPR-Local

Find 580 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATTGCCTTTGAAATATT+TGG 0.058372 8_1:-23975685 Msa1186060:CDS
AAAGAAATCTTCGTGATTTC+AGG 0.179731 8_1:-23975624 Msa1186060:CDS
TCTTTCCTTGGGTTATCTTT+AGG 0.200644 8_1:+23978556 None:intergenic
CTGCAATTGCCTTCAACTTT+GGG 0.208092 8_1:+23975859 None:intergenic
ATATCTGTATTCTCATTTCT+TGG 0.223332 8_1:+23976329 None:intergenic
TGAAGGAGAAGAGTGAAATT+AGG 0.232357 8_1:+23982452 None:intergenic
GTGAGATTGAGTGAAGATTT+TGG 0.246880 8_1:+23982494 None:intergenic
CAACATACAGTGAACTGTTT+AGG 0.257612 8_1:-23974743 Msa1186060:three_prime_UTR
ATGACGGGCTAGAGGATATT+TGG 0.265424 8_1:-23978477 Msa1186060:CDS
GATTGCTGAAGAAGATTTCT+TGG 0.265431 8_1:-23976837 Msa1186060:CDS
ATCTTCTTCCTCTTCTTCTT+CGG 0.267403 8_1:+23977594 None:intergenic
CGTGAAACGCTTTGACGATT+TGG 0.276231 8_1:-23976129 Msa1186060:CDS
AGTTTAGAGGGTGGAGAATA+TGG 0.279708 8_1:-23980290 Msa1186060:CDS
TCTGCAATTGCCTTCAACTT+TGG 0.287962 8_1:+23975858 None:intergenic
GTATGGTGATCTTCCTCTTC+TGG 0.293249 8_1:+23975360 None:intergenic
AACATACAGTGAACTGTTTA+GGG 0.293302 8_1:-23974742 Msa1186060:three_prime_UTR
GTGAAGGGATTTCATTGGTT+GGG 0.299232 8_1:-23975509 Msa1186060:CDS
GTAGTAGTGAAGAACTTTAC+TGG 0.300350 8_1:+23976034 None:intergenic
GAAGGAGAAGAGTGAAATTA+GGG 0.307951 8_1:+23982453 None:intergenic
TCTTCTTCCTCTTCTTCTTC+GGG 0.315335 8_1:+23977595 None:intergenic
CTCAACTTCAATCTTCTGCC+TGG 0.320090 8_1:+23975947 None:intergenic
ACTCCTTCTTGAAACAAGTA+TGG 0.324325 8_1:+23975343 None:intergenic
CTCTTTATCAAAATCATGTT+AGG 0.326043 8_1:-23976253 Msa1186060:CDS
TGATTCCATAACATATTGTT+TGG 0.326185 8_1:+23982611 None:intergenic
CTTTCAAGAATCGATCAATA+AGG 0.330628 8_1:+23980189 None:intergenic
TTTGTTCTAAAAGACGATCT+TGG 0.336791 8_1:-23977553 Msa1186060:CDS
CTTGTATTGAAACTCAAATA+TGG 0.336843 8_1:+23977486 None:intergenic
AATGCAGGAGACTGCCGTTT+TGG 0.338469 8_1:+23979963 None:intergenic
AGATCAAAATGTCATAGATT+TGG 0.353547 8_1:-23980132 Msa1186060:CDS
ATCCATGATATGATCAGATA+TGG 0.358045 8_1:+23975818 None:intergenic
ATTCAGACGAGGAGGATGAT+AGG 0.362438 8_1:-23980025 Msa1186060:CDS
TAAACACCTTTATCTTTCCT+TGG 0.364500 8_1:+23978544 None:intergenic
CTGCCTCCTAATGCATACTA+TGG 0.365235 8_1:-23978616 Msa1186060:CDS
TTTCTCGAGAGCCCATTGTT+AGG 0.368522 8_1:-23975228 Msa1186060:CDS
AAACGCACATTTAAGCCATT+TGG 0.370806 8_1:-23982575 Msa1186060:five_prime_UTR
CAACTTTCTCGTCAGAAACT+TGG 0.374377 8_1:-23976750 Msa1186060:CDS
CTTTCTCCATAGTATGCATT+AGG 0.374710 8_1:+23978610 None:intergenic
CAGTGAACTGTTTAGGGATT+GGG 0.375166 8_1:-23974736 Msa1186060:three_prime_UTR
TCTGAATCAATTATAACAAC+AGG 0.376009 8_1:+23980041 None:intergenic
TTTCCCTTCTTCTTTGGAAA+TGG 0.383506 8_1:+23982522 None:intergenic
ATTGACTGTCATTAGTGTTC+CGG 0.388107 8_1:+23974881 None:intergenic
GCTTCAACTAGAATCGAGTT+TGG 0.390889 8_1:-23982662 None:intergenic
ATGAAAGTCTTTCCCGATCC+TGG 0.391179 8_1:+23976689 None:intergenic
ACTCCAACCCTTCCACTTCA+TGG 0.391297 8_1:+23975653 None:intergenic
AAAGATAAAGGTGTTTATCT+TGG 0.394549 8_1:-23978538 Msa1186060:CDS
CTTTCTCCATTGTAAGCATT+GGG 0.398754 8_1:+23978664 None:intergenic
TTCTTCTTTGGAAATGGTAG+TGG 0.399041 8_1:+23982528 None:intergenic
TCCTCTTCTTCTTCGGGCGG+AGG 0.399183 8_1:+23977601 None:intergenic
ATGAGCCAGGATGCATCCCC+CGG 0.399794 8_1:+23976715 None:intergenic
AGCGTTTCACGCTAGGTATA+TGG 0.400878 8_1:+23976141 None:intergenic
GGTAGGATATTTAGCAAAGT+AGG 0.403325 8_1:+23980211 None:intergenic
TTCTCGAGAGCCCATTGTTA+GGG 0.407823 8_1:-23975227 Msa1186060:CDS
GATAACCCAAGGAAAGATAA+AGG 0.408681 8_1:-23978550 Msa1186060:CDS
GATATGTTTGTCGTGTTTGT+GGG 0.412548 8_1:-23977531 Msa1186060:CDS
TGCATCCTGGCTCATGCTCC+AGG 0.412800 8_1:-23976707 Msa1186060:CDS
TTCTTTGGCTTTCGACGAAT+CGG 0.413140 8_1:+23976883 None:intergenic
ACTTGGTGGGAGACCATCCC+GGG 0.418803 8_1:-23976733 Msa1186060:CDS
GTTTGTGGGGTTATTGATAG+AGG 0.420352 8_1:-23977517 Msa1186060:CDS
ATCATCCAAACAATATGTTA+TGG 0.422274 8_1:-23982616 Msa1186060:five_prime_UTR
TTTCCTAGGTGTTTGTACTT+TGG 0.423941 8_1:+23976292 None:intergenic
CATATTTGAGTTTCAATACA+AGG 0.440503 8_1:-23977485 Msa1186060:intron
CCGATCCTGGAGCATGAGCC+AGG 0.440756 8_1:+23976702 None:intergenic
AAACACCTTTATCTTTCCTT+GGG 0.441563 8_1:+23978545 None:intergenic
ACTTTCTCCATTGTAAGCAT+TGG 0.442346 8_1:+23978663 None:intergenic
ACCACTAGAGGTCGAGCATT+GGG 0.442508 8_1:+23976629 None:intergenic
TCTGTTACTCGTCAAGCTAT+TGG 0.444358 8_1:-23975447 Msa1186060:CDS
ACAGTGAACTGTTTAGGGAT+TGG 0.444397 8_1:-23974737 Msa1186060:three_prime_UTR
GGCATCCCGTGTCATCATCT+TGG 0.446746 8_1:-23975487 Msa1186060:CDS
CCAAGGGAATATTGTCGACT+TGG 0.450678 8_1:-23976601 Msa1186060:CDS
TCTTGACGAGCTTCCTGGCC+TGG 0.451010 8_1:-23976000 Msa1186060:CDS
TGAAGGGATTTCATTGGTTG+GGG 0.452191 8_1:-23975508 Msa1186060:CDS
CCTAGGAAAGTTGTATTGTC+TGG 0.452995 8_1:-23976278 Msa1186060:CDS
CCAGACAATACAACTTTCCT+AGG 0.454063 8_1:+23976278 None:intergenic
CTGGCTCATGCTCCAGGATC+GGG 0.454771 8_1:-23976701 Msa1186060:CDS
TTACGTCTTCCCCTAACAAT+GGG 0.457199 8_1:+23975217 None:intergenic
GGATATGTTTGTCGTGTTTG+TGG 0.457879 8_1:-23977532 Msa1186060:CDS
TCGTCAAAGCGTTTCACGCT+AGG 0.459802 8_1:+23976134 None:intergenic
TCACTCTTCTCCTTCACAAT+CGG 0.462599 8_1:-23982445 Msa1186060:intron
AAGAAATGAGAATACAGATA+TGG 0.463938 8_1:-23976327 Msa1186060:CDS
AATAGAGATGGAATATTTGA+AGG 0.464729 8_1:-23975050 Msa1186060:intron
GAACTTTAAGCAATATCTCT+TGG 0.466423 8_1:+23976384 None:intergenic
TTTCAAGAATCGATCAATAA+GGG 0.467494 8_1:+23980190 None:intergenic
CTTGAAAGTGGTGACAGATC+AGG 0.469249 8_1:-23980174 Msa1186060:CDS
CCAAGTCGACAATATTCCCT+TGG 0.472773 8_1:+23976601 None:intergenic
ATGAAACCGCACCAAGTTGA+AGG 0.476732 8_1:-23976776 Msa1186060:CDS
TTTGATTAGCATGCCGAGGA+TGG 0.477649 8_1:+23976798 None:intergenic
AAGTGGAAGGGTTGGAGTCT+CGG 0.479399 8_1:-23975648 Msa1186060:CDS
ACTGTTTGTATCCTAAGAAA+AGG 0.480977 8_1:+23976456 None:intergenic
AAAACTTCTGTGATTGCATA+CGG 0.482094 8_1:+23980317 None:intergenic
TCATCTAAAATGAGAATTGA+GGG 0.482745 8_1:+23976362 None:intergenic
GTAGGATATTTAGCAAAGTA+GGG 0.482794 8_1:+23980212 None:intergenic
TATTGATCGATTCTTGAAAG+TGG 0.483603 8_1:-23980186 Msa1186060:CDS
TAGGTGTTTGTACTTTGGCA+AGG 0.485081 8_1:+23976297 None:intergenic
GTATCTGCACCCAAAGTTGA+AGG 0.486370 8_1:-23975868 Msa1186060:CDS
TCGTCCGACGCATTCAGGCT+AGG 0.486785 8_1:-23976166 Msa1186060:CDS
AACCTTTCCAAATATTTCAA+AGG 0.488803 8_1:+23975678 None:intergenic
CAAGTCGACAATATTCCCTT+GGG 0.488871 8_1:+23976602 None:intergenic
GGTGAAGGGATTTCATTGGT+TGG 0.488938 8_1:-23975510 Msa1186060:CDS
TGACAGCAGATCTCAGCAAC+TGG 0.489708 8_1:-23976513 Msa1186060:CDS
CTGAACCTATGTGAATCAGC+TGG 0.490694 8_1:-23975735 Msa1186060:CDS
TTCCATATCTGATCATATCA+TGG 0.490782 8_1:-23975820 Msa1186060:CDS
TCAACTTCAATCTTCTGCCT+GGG 0.491267 8_1:+23975948 None:intergenic
TGCCTTTGAAATATTTGGAA+AGG 0.491523 8_1:-23975680 Msa1186060:CDS
AACAAATTCAAAGGGATGCT+AGG 0.499950 8_1:-23980103 Msa1186060:CDS
AGGTGTTTGTACTTTGGCAA+GGG 0.500985 8_1:+23976298 None:intergenic
GGATGAGGAACAAATTCAAA+GGG 0.502729 8_1:-23980111 Msa1186060:CDS
CCTGGCTCATGCTCCAGGAT+CGG 0.504936 8_1:-23976702 Msa1186060:CDS
ACTACCATTTCCAAAGAAGA+AGG 0.505115 8_1:-23982526 Msa1186060:five_prime_UTR
AAACTTAAGTTATCAAGTGA+TGG 0.505358 8_1:-23980383 Msa1186060:CDS
CTCATCTAAAATGAGAATTG+AGG 0.505738 8_1:+23976361 None:intergenic
TTCCTTGGGTTATCTTTAGG+AGG 0.506209 8_1:+23978559 None:intergenic
ACCTCTAGTGGTGCTTCCCA+AGG 0.510520 8_1:-23976618 Msa1186060:CDS
TGTTTGAATTCACGTCCAAA+TGG 0.516553 8_1:+23982560 None:intergenic
TCAATCAAAGCATGTGGTGA+AGG 0.516797 8_1:-23975525 Msa1186060:CDS
CAGTTTGCAACTCTCTACAT+TGG 0.523193 8_1:+23974800 None:intergenic
GCCATGTTCAGCACAAGCTA+AGG 0.525758 8_1:-23980357 Msa1186060:CDS
CACCACTAGAGGTCGAGCAT+TGG 0.525762 8_1:+23976628 None:intergenic
CTTTCTCGTCAGAAACTTGG+TGG 0.528537 8_1:-23976747 Msa1186060:CDS
AACTTGGTGGGAGACCATCC+CGG 0.528539 8_1:-23976734 Msa1186060:CDS
TCACCATACTTGTTTCAAGA+AGG 0.531321 8_1:-23975346 Msa1186060:CDS
TCTGGAGCAGAGTGTTTAGC+TGG 0.532387 8_1:+23982296 None:intergenic
TCCTCCGCCCGAAGAAGAAG+AGG 0.537285 8_1:-23977602 Msa1186060:CDS
ATGTGGTGAAGGGATTTCAT+TGG 0.540076 8_1:-23975514 Msa1186060:CDS
TCTTTATCAAAATCATGTTA+GGG 0.540566 8_1:-23976252 Msa1186060:CDS
TTGATTAGCATGCCGAGGAT+GGG 0.541496 8_1:+23976799 None:intergenic
TGGATGAGGAACAAATTCAA+AGG 0.542191 8_1:-23980112 Msa1186060:CDS
CAACTAGAATCGAGTTTGGA+TGG 0.543878 8_1:-23982658 Msa1186060:five_prime_UTR
AATATTGTCGACTTGGAAGA+AGG 0.545692 8_1:-23976594 Msa1186060:CDS
AGTATCATCAATGGATTCAT+CGG 0.546019 8_1:-23982330 Msa1186060:exon
TGACTCCATCTCTCATATCA+AGG 0.547119 8_1:+23975781 None:intergenic
TTTACGTCTTCCCCTAACAA+TGG 0.549734 8_1:+23975216 None:intergenic
AAAGTTCTTCACTACTACAA+AGG 0.550973 8_1:-23976029 Msa1186060:CDS
TTCAGACGAGGAGGATGATA+GGG 0.552622 8_1:-23980024 Msa1186060:CDS
TGTATTTGTCAGGTAACATG+TGG 0.553073 8_1:-23975101 Msa1186060:intron
ACAAATTCAAAGGGATGCTA+GGG 0.554224 8_1:-23980102 Msa1186060:CDS
TAGCCATGAAGTGGAAGGGT+TGG 0.555020 8_1:-23975656 Msa1186060:CDS
CATCCTCCCAATGCTTACAA+TGG 0.555508 8_1:-23978670 Msa1186060:CDS
ACAGTGAAATCTACCAGGCC+AGG 0.556543 8_1:+23975987 None:intergenic
TTCTCCAGGTATTTCATCTG+AGG 0.558494 8_1:-23980417 Msa1186060:intron
TTTCCCCAGCTGATTCACAT+AGG 0.559110 8_1:+23975730 None:intergenic
AGCTGCTGATTCTCCAGAAG+AGG 0.560162 8_1:-23975373 Msa1186060:CDS
GCAGACCTTGATATGAGAGA+TGG 0.560724 8_1:-23975786 Msa1186060:CDS
TGGAAAGGTTAGCCATGAAG+TGG 0.563673 8_1:-23975665 Msa1186060:CDS
GAAAGTTGAATCCTTCAACT+TGG 0.564597 8_1:+23976765 None:intergenic
CCAGGTATTTCATCTGAGGA+AGG 0.567377 8_1:-23980413 Msa1186060:intron
TGTTTATCTTGGTGTACAAG+AGG 0.574886 8_1:-23978527 Msa1186060:CDS
ACAACAGGGCATGGTGCCGC+AGG 0.575262 8_1:+23980056 None:intergenic
GGTTGAGAATACATTACAGA+AGG 0.577283 8_1:-23976108 Msa1186060:CDS
CGAATCGGACATATAAGTCC+TGG 0.578347 8_1:+23976898 None:intergenic
ACGGGCTAGAGGATATTTGG+AGG 0.579451 8_1:-23978474 Msa1186060:CDS
CTGACATATCAGCCCATCCT+CGG 0.580590 8_1:-23976811 Msa1186060:CDS
CTTATTCACAAGTCTTCCGC+CGG 0.580966 8_1:-23974900 Msa1186060:CDS
AAGGTTAGCCATGAAGTGGA+AGG 0.584042 8_1:-23975661 Msa1186060:CDS
AGAATATGGTAGTGTGACAA+AGG 0.585823 8_1:-23980276 Msa1186060:CDS
CAATCAAAGCATGTGGTGAA+GGG 0.586332 8_1:-23975524 Msa1186060:CDS
TCAATTATAACAACAGGGCA+TGG 0.588679 8_1:+23980047 None:intergenic
TGAAGGTTAAAAGGAGCACC+AGG 0.589607 8_1:-23976916 Msa1186060:intron
TGGTTGATGCTGAAGATGAC+GGG 0.589842 8_1:-23978492 Msa1186060:CDS
AATTCTATATCAAATAGAGA+TGG 0.590327 8_1:-23975062 Msa1186060:CDS
ACCTTAGCTTGTGCTGAACA+TGG 0.590439 8_1:+23980356 None:intergenic
TCCCAATGCTCGACCTCTAG+TGG 0.592202 8_1:-23976630 Msa1186060:CDS
GACTGTCATTAGTGTTCCGG+CGG 0.593097 8_1:+23974884 None:intergenic
TGAACCTATGTGAATCAGCT+GGG 0.593499 8_1:-23975734 Msa1186060:CDS
TGAAAACTCTCTTTGTTCAG+CGG 0.593795 8_1:+23975593 None:intergenic
TCAATGTTCTCAATCTTGTG+AGG 0.593862 8_1:-23976223 Msa1186060:CDS
TTCATTTGATTAGCATGCCG+AGG 0.593888 8_1:+23976794 None:intergenic
TCTTCCTCTTCTTCTTCGGG+CGG 0.594398 8_1:+23977598 None:intergenic
TCTCCATAGTATGCATTAGG+AGG 0.594640 8_1:+23978613 None:intergenic
TGGTGCTCAAACTTACGCCC+AGG 0.602478 8_1:-23975965 Msa1186060:CDS
GGAGTTTCAAACGTGGCAAG+TGG 0.607581 8_1:-23976573 Msa1186060:CDS
AAGAATCGATCAATAAGGGT+AGG 0.608375 8_1:+23980194 None:intergenic
ACAAGAGGAAGAAGATAATG+TGG 0.609892 8_1:-23978512 Msa1186060:CDS
TTTCTCGTCAGAAACTTGGT+GGG 0.610600 8_1:-23976746 Msa1186060:CDS
AAATGTCATAGATTTGGATG+AGG 0.611024 8_1:-23980126 Msa1186060:CDS
GTGGTTGATGCTGAAGATGA+CGG 0.612200 8_1:-23978493 Msa1186060:CDS
TTATCAAAATCATGTTAGGG+AGG 0.612213 8_1:-23976249 Msa1186060:CDS
TTTGGCTCAATCAAAGCATG+TGG 0.612350 8_1:-23975531 Msa1186060:CDS
ATTACTATTATCACACACAA+TGG 0.613137 8_1:+23976427 None:intergenic
ATAGCTTGACGAGTAACAGA+TGG 0.614442 8_1:+23975450 None:intergenic
CCTCTAGTGGTGCTTCCCAA+GGG 0.616113 8_1:-23976617 Msa1186060:CDS
CTACCATTTCCAAAGAAGAA+GGG 0.619057 8_1:-23982525 Msa1186060:five_prime_UTR
CAATAGCAATGTCAGAGCAG+AGG 0.619661 8_1:+23974655 None:intergenic
TGCTGAAGATGACGGGCTAG+AGG 0.620033 8_1:-23978485 Msa1186060:CDS
TTGAATCCTTCAACTTGGTG+CGG 0.621581 8_1:+23976770 None:intergenic
TATTTGGAGGGAGATGTCAA+TGG 0.623139 8_1:-23978461 Msa1186060:CDS
TTTGAATGGAATGAATATTG+TGG 0.623573 8_1:-23975303 Msa1186060:CDS
TCTCCATTGTAAGCATTGGG+AGG 0.624764 8_1:+23978667 None:intergenic
TCTCGAGAGCCCATTGTTAG+GGG 0.624813 8_1:-23975226 Msa1186060:CDS
CTATGATCTATACACTGTGA+AGG 0.627350 8_1:-23976537 Msa1186060:CDS
GAACATCCAAGATGATGACA+CGG 0.628032 8_1:+23975481 None:intergenic
ATGCATGTTACCGATTGTGA+AGG 0.628417 8_1:+23982435 None:intergenic
GTGTTTCAACTTCAAATGCG+CGG 0.628851 8_1:+23975277 None:intergenic
TAGCTTGACGAGTAACAGAT+GGG 0.629929 8_1:+23975451 None:intergenic
TGCCTCCTAAAGATAACCCA+AGG 0.631547 8_1:-23978561 Msa1186060:CDS
GCTAAACACTCTGCTCCAGA+TGG 0.632896 8_1:-23982293 Msa1186060:intron
CGGGCTAGAGGATATTTGGA+GGG 0.633157 8_1:-23978473 Msa1186060:CDS
TATAATTGATTCAGACGAGG+AGG 0.633443 8_1:-23980033 Msa1186060:CDS
GCACCACAGTGAAATCTACC+AGG 0.638762 8_1:+23975982 None:intergenic
CAGCAGATCTCAGCAACTGG+AGG 0.639131 8_1:-23976510 Msa1186060:CDS
GAACTGTTTAGGGATTGGGA+TGG 0.642544 8_1:-23974732 Msa1186060:three_prime_UTR
CCCTTGGGAAGCACCACTAG+AGG 0.642587 8_1:+23976617 None:intergenic
AACTGGAGGTGTTAAAACAA+TGG 0.644165 8_1:-23976496 Msa1186060:CDS
CTGAATCAATTATAACAACA+GGG 0.647689 8_1:+23980042 None:intergenic
AGGTTAGCCATGAAGTGGAA+GGG 0.648273 8_1:-23975660 Msa1186060:CDS
ATATGTTTGTCGTGTTTGTG+GGG 0.652598 8_1:-23977530 Msa1186060:CDS
GAAGTTTAACAATTCACCTG+AGG 0.658535 8_1:-23975565 Msa1186060:CDS
GTATTTGTCAGGTAACATGT+GGG 0.658755 8_1:-23975100 Msa1186060:intron
TGCATACTATGGAGAAAGCG+CGG 0.658786 8_1:-23978605 Msa1186060:CDS
GGACCCTAGCCTGAATGCGT+CGG 0.659146 8_1:+23976162 None:intergenic
ACACTTGATGTGAAAGAATG+TGG 0.659776 8_1:-23975258 Msa1186060:CDS
AACATCCAAGATGATGACAC+GGG 0.663891 8_1:+23975482 None:intergenic
TAGGATATTTAGCAAAGTAG+GGG 0.668264 8_1:+23980213 None:intergenic
AAGAGAAAAGGATGTTCCTG+CGG 0.672492 8_1:-23980072 Msa1186060:CDS
TTGCCAAAGTACAAACACCT+AGG 0.673997 8_1:-23976295 Msa1186060:CDS
TGTTATAATTGATTCAGACG+AGG 0.676503 8_1:-23980036 Msa1186060:CDS
AATGACAGTCAATCAGAGTG+TGG 0.682864 8_1:-23974871 Msa1186060:three_prime_UTR
CTTGGTGGGAGACCATCCCG+GGG 0.683274 8_1:-23976732 Msa1186060:CDS
GAACCTATGTGAATCAGCTG+GGG 0.691335 8_1:-23975733 Msa1186060:CDS
GGAAGAAGGAGTTTCAAACG+TGG 0.744990 8_1:-23976580 Msa1186060:CDS
ACAGTGTATAGATCATAGAG+CGG 0.752873 8_1:+23976542 None:intergenic
TGGCCTGGTAGATTTCACTG+TGG 0.783766 8_1:-23975985 Msa1186060:CDS
TTGGTGGGAGACCATCCCGG+GGG 0.791439 8_1:-23976731 Msa1186060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAAATAAAAAAA+AGG + chr8_1:23975507-23975526 None:intergenic 0.0%
!! ATAAATAAATAAAAAATAAA+GGG + chr8_1:23976454-23976473 None:intergenic 0.0%
!! AATAAATAAATAAAAAATAA+AGG + chr8_1:23976455-23976474 None:intergenic 0.0%
!! AATCACATAAAAAAAAATAT+GGG + chr8_1:23975267-23975286 None:intergenic 10.0%
!! AAATCACATAAAAAAAAATA+TGG + chr8_1:23975268-23975287 None:intergenic 10.0%
!!! TTTATATTCATAATTTTTCT+GGG + chr8_1:23975745-23975764 None:intergenic 10.0%
!! CATTATGATAATAATATAAA+AGG + chr8_1:23975873-23975892 None:intergenic 10.0%
!! TAAGTACATATATTTATTAA+TGG + chr8_1:23976741-23976760 None:intergenic 10.0%
!! TAAATATATGTACTTATTAA+TGG - chr8_1:23976745-23976764 Msa1186060:CDS 10.0%
!!! TTTTGGAATATATAATTTTT+TGG - chr8_1:23977365-23977384 Msa1186060:intron 10.0%
!!! TTAAAAATATACCTTTATTT+GGG - chr8_1:23977416-23977435 Msa1186060:intron 10.0%
!! AAAATAAAATAATGTATGTT+TGG - chr8_1:23977715-23977734 Msa1186060:intron 10.0%
!! ATGAGAAATTAAATGATAAA+TGG + chr8_1:23974888-23974907 None:intergenic 15.0%
!!! TATTTTCATCTATTTGTTAA+TGG - chr8_1:23975122-23975141 Msa1186060:intron 15.0%
!!! TTTTAATGTAAATTGATTGT+GGG - chr8_1:23975198-23975217 Msa1186060:intron 15.0%
!!! GTTTATATTCATAATTTTTC+TGG + chr8_1:23975746-23975765 None:intergenic 15.0%
!! GAAAAATTATGAATATAAAC+CGG - chr8_1:23975746-23975765 Msa1186060:CDS 15.0%
!! CATATATTTATTAATGGAAT+AGG + chr8_1:23976735-23976754 None:intergenic 15.0%
!!! CAAATAAAGGTATATTTTTA+AGG + chr8_1:23977417-23977436 None:intergenic 15.0%
!! CTTAAAAATATACCTTTATT+TGG - chr8_1:23977415-23977434 Msa1186060:intron 15.0%
!! AAAAAGATAAAAATTCAAGA+CGG + chr8_1:23977531-23977550 None:intergenic 15.0%
!! CATAATAATTATTGGAATTT+AGG - chr8_1:23977907-23977926 Msa1186060:intron 15.0%
!!! AATATGTTCTGAAAATTAAA+TGG + chr8_1:23978261-23978280 None:intergenic 15.0%
!!! ATATCTTTTGATTTATAAAG+CGG - chr8_1:23979125-23979144 Msa1186060:intron 15.0%
!!! AATGTGCTATTATATTATTT+TGG + chr8_1:23980183-23980202 None:intergenic 15.0%
!! AAATAATATAATAGCACATT+AGG - chr8_1:23980183-23980202 Msa1186060:CDS 15.0%
!! ATACAAATAAAACAAGAATT+AGG + chr8_1:23982157-23982176 None:intergenic 15.0%
!!! AATGATAAATGGTTGATTTT+AGG + chr8_1:23974877-23974896 None:intergenic 20.0%
!! AATAAAAACAAAAATTCAGC+TGG + chr8_1:23975106-23975125 None:intergenic 20.0%
!! CACAATCAATTTACATTAAA+AGG + chr8_1:23975199-23975218 None:intergenic 20.0%
!!! CTTTTAATGTAAATTGATTG+TGG - chr8_1:23975197-23975216 Msa1186060:intron 20.0%
!!! ATTTTAATCCAACTCATTTA+CGG + chr8_1:23975301-23975320 None:intergenic 20.0%
!!! AAATGAGTTGGATTAAAATA+TGG - chr8_1:23975302-23975321 Msa1186060:CDS 20.0%
!! TTTCTTGAAAAGATTATGTT+TGG - chr8_1:23975416-23975435 Msa1186060:CDS 20.0%
!!! TAAGCAATATTTCACTTTTT+AGG - chr8_1:23975583-23975602 Msa1186060:CDS 20.0%
!!! TTTGTTTGTTGCTTATATTT+GGG - chr8_1:23975680-23975699 Msa1186060:CDS 20.0%
!! ACACATTTCCAAAAAAAAAA+GGG + chr8_1:23975962-23975981 None:intergenic 20.0%
!! AACACATTTCCAAAAAAAAA+AGG + chr8_1:23975963-23975982 None:intergenic 20.0%
!!! TTTTTTTTTTGGAAATGTGT+TGG - chr8_1:23975962-23975981 Msa1186060:CDS 20.0%
!!! TTTTTTTTTGGAAATGTGTT+GGG - chr8_1:23975963-23975982 Msa1186060:CDS 20.0%
!! TATTTATTGAACCGTTTATA+TGG - chr8_1:23976467-23976486 Msa1186060:CDS 20.0%
!! AAAGGCTTATATAATTCAAT+TGG + chr8_1:23976561-23976580 None:intergenic 20.0%
!! AACAAGAGAAAATATTCTAA+AGG + chr8_1:23976579-23976598 None:intergenic 20.0%
!! TCAAGTGTTATATATTGAAT+GGG + chr8_1:23976675-23976694 None:intergenic 20.0%
!! TTCAAGTGTTATATATTGAA+TGG + chr8_1:23976676-23976695 None:intergenic 20.0%
!! AAACGATACTTATAAACTAA+AGG + chr8_1:23976706-23976725 None:intergenic 20.0%
!! ATATTCCAAAAATAAAAGCA+GGG + chr8_1:23977356-23977375 None:intergenic 20.0%
!! TATATTCCAAAAATAAAAGC+AGG + chr8_1:23977357-23977376 None:intergenic 20.0%
!!! GTATTTCATTTTATCATTTG+TGG - chr8_1:23977476-23977495 Msa1186060:intron 20.0%
!! AAAAGATAAAAATTCAAGAC+GGG + chr8_1:23977530-23977549 None:intergenic 20.0%
!! CAAACAGTCATAATAATTAT+TGG - chr8_1:23977899-23977918 Msa1186060:intron 20.0%
!! AGAATTTCAGTTATAAAAGA+GGG - chr8_1:23977983-23978002 Msa1186060:intron 20.0%
!! ATGAAAAACAGAAAATTGAA+AGG + chr8_1:23978119-23978138 None:intergenic 20.0%
!! TAATACACAAAATCTTACAA+AGG + chr8_1:23978331-23978350 None:intergenic 20.0%
!!! TTTGTAAGATTTTGTGTATT+AGG - chr8_1:23978330-23978349 Msa1186060:intron 20.0%
!!! TCCTTAATAGTTATCTTTTA+AGG - chr8_1:23978964-23978983 Msa1186060:intron 20.0%
!! TCCTTAAAAGATAACTATTA+AGG + chr8_1:23978968-23978987 None:intergenic 20.0%
!!! TCTATAAGCTTTATTAGTAT+AGG - chr8_1:23979190-23979209 Msa1186060:intron 20.0%
!!! CTATAAGCTTTATTAGTATA+GGG - chr8_1:23979191-23979210 Msa1186060:intron 20.0%
!!! GCTATTATATTATTTTGGTT+GGG + chr8_1:23980178-23980197 None:intergenic 20.0%
!!! TGCTATTATATTATTTTGGT+TGG + chr8_1:23980179-23980198 None:intergenic 20.0%
!! AATTCTCATTATATATGTTC+TGG - chr8_1:23980252-23980271 Msa1186060:CDS 20.0%
!! TCTTTATCAAAATCATGTTA+GGG - chr8_1:23981021-23981040 Msa1186060:intron 20.0%
!!! TTTTCATATGATATGCAAAA+AGG + chr8_1:23982117-23982136 None:intergenic 20.0%
!!! TTGTTTTATTTGTATTTGTC+AGG - chr8_1:23982162-23982181 Msa1186060:intron 20.0%
!! AATTCTATATCAAATAGAGA+TGG - chr8_1:23982211-23982230 Msa1186060:intron 20.0%
! ATCATCCAAACAATATGTTA+TGG - chr8_1:23974657-23974676 Msa1186060:three_prime_UTR 25.0%
! TGATTCCATAACATATTGTT+TGG + chr8_1:23974665-23974684 None:intergenic 25.0%
!!! TTTTTTTACCGTAAATGAGT+TGG - chr8_1:23975290-23975309 Msa1186060:CDS 25.0%
! ATATTGCTTATAATTGAGAC+CGG + chr8_1:23975573-23975592 None:intergenic 25.0%
! CATTGAATAACTAATGTATC+TGG + chr8_1:23975647-23975666 None:intergenic 25.0%
!! GTTTGTTTGTTGCTTATATT+TGG - chr8_1:23975679-23975698 Msa1186060:CDS 25.0%
!!! ACATTTTCATAAGCTTTTTC+CGG + chr8_1:23975768-23975787 None:intergenic 25.0%
! AATAATATAAAAGGCCTGTT+TGG + chr8_1:23975864-23975883 None:intergenic 25.0%
!! ATGTTATACAGTCTATGTTT+TGG - chr8_1:23975890-23975909 Msa1186060:CDS 25.0%
! CTAAAAACACAAAAAATGGT+GGG - chr8_1:23976421-23976440 Msa1186060:CDS 25.0%
! AAACTTAAGTTATCAAGTGA+TGG - chr8_1:23976890-23976909 Msa1186060:CDS 25.0%
!!! AGAAGTTTTAAACAGTTTAG+AGG - chr8_1:23976970-23976989 Msa1186060:intron 25.0%
!!! GAAGTTTTAAACAGTTTAGA+GGG - chr8_1:23976971-23976990 Msa1186060:intron 25.0%
! TTTCAAGAATCGATCAATAA+GGG + chr8_1:23977086-23977105 None:intergenic 25.0%
! AGATCAAAATGTCATAGATT+TGG - chr8_1:23977141-23977160 Msa1186060:intron 25.0%
! CTGAATCAATTATAACAACA+GGG + chr8_1:23977234-23977253 None:intergenic 25.0%
! TCTGAATCAATTATAACAAC+AGG + chr8_1:23977235-23977254 None:intergenic 25.0%
!!! CTTACAATCATTTTTAATGC+AGG + chr8_1:23977328-23977347 None:intergenic 25.0%
!!! TTTTAAGGATTACAAAAGCA+GGG + chr8_1:23977402-23977421 None:intergenic 25.0%
!!! TTTTTAAGGATTACAAAAGC+AGG + chr8_1:23977403-23977422 None:intergenic 25.0%
!! AGCAAAACAGTAAATGATTT+TGG + chr8_1:23977614-23977633 None:intergenic 25.0%
! CCAGAAATTGTATATTGTAA+TGG + chr8_1:23977650-23977669 None:intergenic 25.0%
! CCATTACAATATACAATTTC+TGG - chr8_1:23977647-23977666 Msa1186060:intron 25.0%
! TACATAAATACAAAGCAACA+AGG + chr8_1:23977675-23977694 None:intergenic 25.0%
! CATAGGAGTAAAGAAAAAAA+AGG + chr8_1:23977778-23977797 None:intergenic 25.0%
! GAGAATTTCAGTTATAAAAG+AGG - chr8_1:23977982-23978001 Msa1186060:intron 25.0%
! GAATTTCAGTTATAAAAGAG+GGG - chr8_1:23977984-23978003 Msa1186060:intron 25.0%
! AATTTCAGTTATAAAAGAGG+GGG - chr8_1:23977985-23978004 Msa1186060:intron 25.0%
!!! ACAGTGTTACTTTCAAATTT+CGG - chr8_1:23978173-23978192 Msa1186060:intron 25.0%
!!! TATTGATGAACTTTTTCCAT+AGG - chr8_1:23978277-23978296 Msa1186060:intron 25.0%
!!! ATTGATGAACTTTTTCCATA+GGG - chr8_1:23978278-23978297 Msa1186060:intron 25.0%
!!! AAAGATAAAGGTGTTTATCT+TGG - chr8_1:23978735-23978754 Msa1186060:intron 25.0%
! TATTAGTATAGGGTATATGT+AGG - chr8_1:23979201-23979220 Msa1186060:intron 25.0%
!! AATAGCTTGTATACATATCT+TGG - chr8_1:23979431-23979450 Msa1186060:intron 25.0%
!!! AATTTAACTCTAAGAGCATT+TGG - chr8_1:23979455-23979474 Msa1186060:intron 25.0%
! CTTGTATTGAAACTCAAATA+TGG + chr8_1:23979790-23979809 None:intergenic 25.0%
!! CATATTTGAGTTTCAATACA+AGG - chr8_1:23979788-23979807 Msa1186060:intron 25.0%
! TGTCTTAAAATTAGATGCAT+AGG - chr8_1:23979998-23980017 Msa1186060:CDS 25.0%
!! ATAGGTTGAATATTTCAACA+AGG - chr8_1:23980016-23980035 Msa1186060:CDS 25.0%
!!! TTCAGTTTTGTAAAACATTC+AGG - chr8_1:23980137-23980156 Msa1186060:CDS 25.0%
! ATATTTGTGATACTTGTAGT+TGG - chr8_1:23980279-23980298 Msa1186060:CDS 25.0%
! TATTTGTGATACTTGTAGTT+GGG - chr8_1:23980280-23980299 Msa1186060:CDS 25.0%
! AACCTTCAACAAAATTGATA+CGG + chr8_1:23980345-23980364 None:intergenic 25.0%
!! CAATTTTGTTGAAGGTTAAA+AGG - chr8_1:23980348-23980367 Msa1186060:CDS 25.0%
!!! AACAAAAGTATCCTTTTCTT+AGG - chr8_1:23980806-23980825 Msa1186060:intron 25.0%
! ATTACTATTATCACACACAA+TGG + chr8_1:23980849-23980868 None:intergenic 25.0%
!! TCATCTAAAATGAGAATTGA+GGG + chr8_1:23980914-23980933 None:intergenic 25.0%
!! TCAATTCTCATTTTAGATGA+GGG - chr8_1:23980914-23980933 Msa1186060:intron 25.0%
! ATATCTGTATTCTCATTTCT+TGG + chr8_1:23980947-23980966 None:intergenic 25.0%
! AAGAAATGAGAATACAGATA+TGG - chr8_1:23980946-23980965 Msa1186060:intron 25.0%
! CTCTTTATCAAAATCATGTT+AGG - chr8_1:23981020-23981039 Msa1186060:intron 25.0%
!! GTTTCCATCTTTAAAAACTT+CGG + chr8_1:23981076-23981095 None:intergenic 25.0%
!!! CAACTTTCCTTTTAAAATCT+GGG + chr8_1:23981192-23981211 None:intergenic 25.0%
!! AAGTTCAAATTTTCTTCTGT+AGG - chr8_1:23981373-23981392 Msa1186060:intron 25.0%
!!! TCTATTGCCTTTGAAATATT+TGG - chr8_1:23981588-23981607 Msa1186060:intron 25.0%
! AACCTTTCCAAATATTTCAA+AGG + chr8_1:23981598-23981617 None:intergenic 25.0%
! TTTGAATGGAATGAATATTG+TGG - chr8_1:23981970-23981989 Msa1186060:intron 25.0%
! TGCAAAAAGGTAAATAAAAG+TGG + chr8_1:23982104-23982123 None:intergenic 25.0%
! AATAGAGATGGAATATTTGA+AGG - chr8_1:23982223-23982242 Msa1186060:intron 25.0%
!!! TGATTACTTTTTCTTTGTCT+AGG - chr8_1:23982320-23982339 Msa1186060:CDS 25.0%
!!! GTTTTTTTTCCCTTCTTCTT+TGG + chr8_1:23974760-23974779 None:intergenic 30.0%
! TTTTCGCATAGTATCATCAA+TGG - chr8_1:23974934-23974953 Msa1186060:CDS 30.0%
! AGTATCATCAATGGATTCAT+CGG - chr8_1:23974943-23974962 Msa1186060:intron 30.0%
ATGAAGAATGATATACCATC+TGG + chr8_1:23974998-23975017 None:intergenic 30.0%
! ATAAGGTGTTCATCAAAACA+GGG + chr8_1:23975442-23975461 None:intergenic 30.0%
! AATAAGGTGTTCATCAAAAC+AGG + chr8_1:23975443-23975462 None:intergenic 30.0%
TGTGCTATAAACTGCAAATA+AGG + chr8_1:23975459-23975478 None:intergenic 30.0%
! CATTGATTAACCGATGTATT+TGG - chr8_1:23975608-23975627 Msa1186060:CDS 30.0%
GTCATATAGACCAAATACAT+CGG + chr8_1:23975621-23975640 None:intergenic 30.0%
AATGACAAAATGACTCAAGT+CGG - chr8_1:23976075-23976094 Msa1186060:CDS 30.0%
AATCCTGTGTTATGAAATGT+TGG - chr8_1:23976330-23976349 Msa1186060:CDS 30.0%
!!! TTTTTGTGTTTTTAGCAGGA+AGG + chr8_1:23976416-23976435 None:intergenic 30.0%
!!! CCATTTTTTGTGTTTTTAGC+AGG + chr8_1:23976420-23976439 None:intergenic 30.0%
CCTGCTAAAAACACAAAAAA+TGG - chr8_1:23976417-23976436 Msa1186060:CDS 30.0%
GCTAAAAACACAAAAAATGG+TGG - chr8_1:23976420-23976439 Msa1186060:CDS 30.0%
! TACTTGTAATTAGCTTCCTT+AGG - chr8_1:23976601-23976620 Msa1186060:CDS 30.0%
TGAAGCAAAATATGCCTTAA+TGG - chr8_1:23976798-23976817 Msa1186060:CDS 30.0%
GAAGCAAAATATGCCTTAAT+GGG - chr8_1:23976799-23976818 Msa1186060:CDS 30.0%
! TAATCCATTTCATTTTCTCC+AGG - chr8_1:23976842-23976861 Msa1186060:CDS 30.0%
AATACCTGGAGAAAATGAAA+TGG + chr8_1:23976849-23976868 None:intergenic 30.0%
AAAACTTCTGTGATTGCATA+CGG + chr8_1:23976959-23976978 None:intergenic 30.0%
!!! TTGCATTTTTCGGGTTATAA+GGG + chr8_1:23977032-23977051 None:intergenic 30.0%
TAGGATATTTAGCAAAGTAG+GGG + chr8_1:23977063-23977082 None:intergenic 30.0%
GTAGGATATTTAGCAAAGTA+GGG + chr8_1:23977064-23977083 None:intergenic 30.0%
CTTTCAAGAATCGATCAATA+AGG + chr8_1:23977087-23977106 None:intergenic 30.0%
! TATTGATCGATTCTTGAAAG+TGG - chr8_1:23977087-23977106 Msa1186060:intron 30.0%
AAATGTCATAGATTTGGATG+AGG - chr8_1:23977147-23977166 Msa1186060:intron 30.0%
! TGTTATAATTGATTCAGACG+AGG - chr8_1:23977237-23977256 Msa1186060:intron 30.0%
!! ATGAAGTTGTTTTGCCAAAA+CGG - chr8_1:23977296-23977315 Msa1186060:intron 30.0%
!!! CAGTAAATGATTTTGGAACT+GGG + chr8_1:23977607-23977626 None:intergenic 30.0%
!!! ACAGTAAATGATTTTGGAAC+TGG + chr8_1:23977608-23977627 None:intergenic 30.0%
GTAAAGAAAAAAAAGGAAGG+TGG + chr8_1:23977771-23977790 None:intergenic 30.0%
GGAGTAAAGAAAAAAAAGGA+AGG + chr8_1:23977774-23977793 None:intergenic 30.0%
ATTTCAGTTATAAAAGAGGG+GGG - chr8_1:23977986-23978005 Msa1186060:intron 30.0%
AAAGTTGCTAAGAGTTGTTT+AGG - chr8_1:23978031-23978050 Msa1186060:intron 30.0%
!! CAGTGTTACTTTCAAATTTC+GGG - chr8_1:23978174-23978193 Msa1186060:intron 30.0%
!! AGTGTTACTTTCAAATTTCG+GGG - chr8_1:23978175-23978194 Msa1186060:intron 30.0%
TGAAAGACGAACAATATACA+AGG - chr8_1:23978232-23978251 Msa1186060:intron 30.0%
! AATATTCCCTTTCCCATTTT+GGG + chr8_1:23978522-23978541 None:intergenic 30.0%
! TAATATTCCCTTTCCCATTT+TGG + chr8_1:23978523-23978542 None:intergenic 30.0%
AAGAATTGTTGCAAGAGAAT+AGG + chr8_1:23978572-23978591 None:intergenic 30.0%
TCTTGCAACAATTCTTTACA+GGG - chr8_1:23978576-23978595 Msa1186060:CDS 30.0%
AAACACCTTTATCTTTCCTT+GGG + chr8_1:23978731-23978750 None:intergenic 30.0%
TAAACACCTTTATCTTTCCT+TGG + chr8_1:23978732-23978751 None:intergenic 30.0%
!! CAATAGAAACTTCTAAAGTG+CGG - chr8_1:23978835-23978854 Msa1186060:intron 30.0%
!! TGGAAAAATAGGCTATTTTG+TGG - chr8_1:23979029-23979048 Msa1186060:intron 30.0%
!! GGAAAAATAGGCTATTTTGT+GGG - chr8_1:23979030-23979049 Msa1186060:intron 30.0%
!! GAAAAATAGGCTATTTTGTG+GGG - chr8_1:23979031-23979050 Msa1186060:intron 30.0%
!! AAAAATAGGCTATTTTGTGG+GGG - chr8_1:23979032-23979051 Msa1186060:intron 30.0%
TTGTTAGTGTTCACTGAAAA+TGG - chr8_1:23979159-23979178 Msa1186060:intron 30.0%
GTATATGTAGGTATATATGC+TGG - chr8_1:23979213-23979232 Msa1186060:intron 30.0%
AATGCAAATTCACATATCTC+AGG + chr8_1:23979503-23979522 None:intergenic 30.0%
!!! ATTTTAATTGCACTCCTACT+AGG - chr8_1:23979635-23979654 Msa1186060:intron 30.0%
!! TTTGTTCTAAAAGACGATCT+TGG - chr8_1:23979720-23979739 Msa1186060:intron 30.0%
TTGAGTTTCAATACAAGGTT+AGG - chr8_1:23979793-23979812 Msa1186060:intron 30.0%
CCAAAAAAACATTCATGCAT+AGG + chr8_1:23979926-23979945 None:intergenic 30.0%
!!! CCTATGCATGAATGTTTTTT+TGG - chr8_1:23979923-23979942 Msa1186060:intron 30.0%
TTAAATAATCTCCTCTGTTG+TGG - chr8_1:23980087-23980106 Msa1186060:CDS 30.0%
TAAATAATCTCCTCTGTTGT+GGG - chr8_1:23980088-23980107 Msa1186060:CDS 30.0%
TAGCACATTAGGACATATTA+TGG - chr8_1:23980194-23980213 Msa1186060:CDS 30.0%
ATTTGTGATACTTGTAGTTG+GGG - chr8_1:23980281-23980300 Msa1186060:CDS 30.0%
! TACCGTATCAATTTTGTTGA+AGG - chr8_1:23980340-23980359 Msa1186060:CDS 30.0%
! AGTTTCATGCAAAGTTTTCT+AGG - chr8_1:23980614-23980633 Msa1186060:intron 30.0%
ACTGTTTGTATCCTAAGAAA+AGG + chr8_1:23980820-23980839 None:intergenic 30.0%
GAACTTTAAGCAATATCTCT+TGG + chr8_1:23980892-23980911 None:intergenic 30.0%
! CTCATCTAAAATGAGAATTG+AGG + chr8_1:23980915-23980934 None:intergenic 30.0%
! CTCAATTCTCATTTTAGATG+AGG - chr8_1:23980913-23980932 Msa1186060:intron 30.0%
TTATCAAAATCATGTTAGGG+AGG - chr8_1:23981024-23981043 Msa1186060:intron 30.0%
!!! GCAACTTTCCTTTTAAAATC+TGG + chr8_1:23981193-23981212 None:intergenic 30.0%
AAAGTTCTTCACTACTACAA+AGG - chr8_1:23981244-23981263 Msa1186060:intron 30.0%
TTCCATATCTGATCATATCA+TGG - chr8_1:23981453-23981472 Msa1186060:intron 30.0%
ATCCATGATATGATCAGATA+TGG + chr8_1:23981458-23981477 None:intergenic 30.0%
!! TGCCTTTGAAATATTTGGAA+AGG - chr8_1:23981593-23981612 Msa1186060:intron 30.0%
AAAGAAATCTTCGTGATTTC+AGG - chr8_1:23981649-23981668 Msa1186060:intron 30.0%
! TGAACAAAGAGAGTTTTCAA+TGG - chr8_1:23981684-23981703 Msa1186060:intron 30.0%
!! CCAAAAAATATTTTTGCCTC+AGG + chr8_1:23981727-23981746 None:intergenic 30.0%
!!! CCTGAGGCAAAAATATTTTT+TGG - chr8_1:23981724-23981743 Msa1186060:intron 30.0%
AGGAGTTAATCTCAAAAATG+TGG - chr8_1:23981947-23981966 Msa1186060:intron 30.0%
TCTCAAAAATGTGGTTTGAA+TGG - chr8_1:23981956-23981975 Msa1186060:intron 30.0%
ACGTAAAAGCTCTGTATAAA+AGG - chr8_1:23982073-23982092 Msa1186060:intron 30.0%
CCTAGAACTAAAAAACTACA+AGG + chr8_1:23982269-23982288 None:intergenic 30.0%
!!! CCTTGTAGTTTTTTAGTTCT+AGG - chr8_1:23982266-23982285 Msa1186060:intron 30.0%
TTGAGTAGAACAGGATATAT+GGG + chr8_1:23982294-23982313 None:intergenic 30.0%
! TTTTCTTTGTCTAGGAGTTT+CGG - chr8_1:23982328-23982347 Msa1186060:exon 30.0%
AACATACAGTGAACTGTTTA+GGG - chr8_1:23982531-23982550 Msa1186060:five_prime_UTR 30.0%
AAACGCACATTTAAGCCATT+TGG - chr8_1:23974698-23974717 Msa1186060:three_prime_UTR 35.0%
TGTTTGAATTCACGTCCAAA+TGG + chr8_1:23974716-23974735 None:intergenic 35.0%
! TTCTTCTTTGGAAATGGTAG+TGG + chr8_1:23974748-23974767 None:intergenic 35.0%
ACTACCATTTCCAAAGAAGA+AGG - chr8_1:23974747-23974766 Msa1186060:three_prime_UTR 35.0%
CTACCATTTCCAAAGAAGAA+GGG - chr8_1:23974748-23974767 Msa1186060:three_prime_UTR 35.0%
! TTTCCCTTCTTCTTTGGAAA+TGG + chr8_1:23974754-23974773 None:intergenic 35.0%
! GTGAGATTGAGTGAAGATTT+TGG + chr8_1:23974782-23974801 None:intergenic 35.0%
GAAGGAGAAGAGTGAAATTA+GGG + chr8_1:23974823-23974842 None:intergenic 35.0%
TGAAGGAGAAGAGTGAAATT+AGG + chr8_1:23974824-23974843 None:intergenic 35.0%
!!! TTGTTTTTGTTTACTCCCTC+CGG - chr8_1:23975551-23975570 Msa1186060:CDS 35.0%
! TTGTTGCTTATATTTGGGAC+TGG - chr8_1:23975685-23975704 Msa1186060:CDS 35.0%
!! TTGGGAGAACTTTTGAAAAC+AGG + chr8_1:23975796-23975815 None:intergenic 35.0%
!!! CATAAGTTTTGAGGCTGTTT+GGG + chr8_1:23975814-23975833 None:intergenic 35.0%
! ATCTACTGGCATAAGTTTTG+AGG + chr8_1:23975823-23975842 None:intergenic 35.0%
GCTTACTTGAGTATATCTAC+TGG + chr8_1:23975837-23975856 None:intergenic 35.0%
TATAAAAGGCCTGTTTGGAT+TGG + chr8_1:23975859-23975878 None:intergenic 35.0%
!!! ATGCGCAACCCTTTTTTTTT+TGG - chr8_1:23975951-23975970 Msa1186060:CDS 35.0%
!! TTGAGTCATTTTGTCATTGG+AGG + chr8_1:23976073-23976092 None:intergenic 35.0%
!! GACTTGAGTCATTTTGTCAT+TGG + chr8_1:23976076-23976095 None:intergenic 35.0%
AAGCAATCCACTTGTTTAGA+CGG - chr8_1:23976156-23976175 Msa1186060:CDS 35.0%
AAGCCAACATTTCATAACAC+AGG + chr8_1:23976336-23976355 None:intergenic 35.0%
!! ACCACTTTGATTTGATTCTG+TGG - chr8_1:23976365-23976384 Msa1186060:CDS 35.0%
!! CCACTTTGATTTGATTCTGT+GGG - chr8_1:23976366-23976385 Msa1186060:CDS 35.0%
!! CACTTTGATTTGATTCTGTG+GGG - chr8_1:23976367-23976386 Msa1186060:CDS 35.0%
AGCTCGTCAATCCATATAAA+CGG + chr8_1:23976481-23976500 None:intergenic 35.0%
CATGATACAAATGCCCATTA+AGG + chr8_1:23976815-23976834 None:intergenic 35.0%
!! GTTTTAAACAGTTTAGAGGG+TGG - chr8_1:23976974-23976993 Msa1186060:intron 35.0%
! AGAATATGGTAGTGTGACAA+AGG - chr8_1:23976997-23977016 Msa1186060:intron 35.0%
!!! CTTGCATTTTTCGGGTTATA+AGG + chr8_1:23977033-23977052 None:intergenic 35.0%
ACCCGAAAAATGCAAGTATT+AGG - chr8_1:23977037-23977056 Msa1186060:intron 35.0%
! GCCTAATACTTGCATTTTTC+GGG + chr8_1:23977041-23977060 None:intergenic 35.0%
! GGCCTAATACTTGCATTTTT+CGG + chr8_1:23977042-23977061 None:intergenic 35.0%
GGTAGGATATTTAGCAAAGT+AGG + chr8_1:23977065-23977084 None:intergenic 35.0%
AAGAATCGATCAATAAGGGT+AGG + chr8_1:23977082-23977101 None:intergenic 35.0%
!! CTATGACATTTTGATCTGAG+TGG + chr8_1:23977138-23977157 None:intergenic 35.0%
TGGATGAGGAACAAATTCAA+AGG - chr8_1:23977161-23977180 Msa1186060:intron 35.0%
GGATGAGGAACAAATTCAAA+GGG - chr8_1:23977162-23977181 Msa1186060:intron 35.0%
AACAAATTCAAAGGGATGCT+AGG - chr8_1:23977170-23977189 Msa1186060:intron 35.0%
ACAAATTCAAAGGGATGCTA+GGG - chr8_1:23977171-23977190 Msa1186060:intron 35.0%
! GGAACATCCTTTTCTCTTTT+TGG + chr8_1:23977199-23977218 None:intergenic 35.0%
TCAATTATAACAACAGGGCA+TGG + chr8_1:23977229-23977248 None:intergenic 35.0%
! TATAATTGATTCAGACGAGG+AGG - chr8_1:23977240-23977259 Msa1186060:intron 35.0%
!!! CTTTGCCCTGCTTTTATTTT+TGG - chr8_1:23977348-23977367 Msa1186060:intron 35.0%
GGGATATACAACCCAAATAA+AGG + chr8_1:23977430-23977449 None:intergenic 35.0%
! AGACAAAAGGTGCAACATTT+AGG + chr8_1:23977577-23977596 None:intergenic 35.0%
AAAGGAAGGTGGAAATAACA+TGG + chr8_1:23977760-23977779 None:intergenic 35.0%
TTCTTAATGACTAACCCTCT+AGG + chr8_1:23977962-23977981 None:intergenic 35.0%
TGTTCGTCTTTCAACAACTA+TGG + chr8_1:23978225-23978244 None:intergenic 35.0%
! ATATTCCCTTTCCCATTTTG+GGG + chr8_1:23978521-23978540 None:intergenic 35.0%
TTGTTGCAAGAGAATAGGAA+AGG + chr8_1:23978567-23978586 None:intergenic 35.0%
CTCTTGCAACAATTCTTTAC+AGG - chr8_1:23978575-23978594 Msa1186060:CDS 35.0%
CTTTCTCCATTGTAAGCATT+GGG + chr8_1:23978612-23978631 None:intergenic 35.0%
ACTTTCTCCATTGTAAGCAT+TGG + chr8_1:23978613-23978632 None:intergenic 35.0%
CTTTCTCCATAGTATGCATT+AGG + chr8_1:23978666-23978685 None:intergenic 35.0%
TCTTTCCTTGGGTTATCTTT+AGG + chr8_1:23978720-23978739 None:intergenic 35.0%
GATAACCCAAGGAAAGATAA+AGG - chr8_1:23978723-23978742 Msa1186060:intron 35.0%
! TGTTTATCTTGGTGTACAAG+AGG - chr8_1:23978746-23978765 Msa1186060:intron 35.0%
ACAAGAGGAAGAAGATAATG+TGG - chr8_1:23978761-23978780 Msa1186060:intron 35.0%
! AAATTTTTCCCCTACTCGTT+TGG - chr8_1:23978908-23978927 Msa1186060:intron 35.0%
! AATTTTTCCCCTACTCGTTT+GGG - chr8_1:23978909-23978928 Msa1186060:intron 35.0%
TAAGGGGGAAATGGAAAAAT+AGG - chr8_1:23979018-23979037 Msa1186060:intron 35.0%
AGCATAACAGAGAGAAAGAA+AGG + chr8_1:23979336-23979355 None:intergenic 35.0%
ATCTTCTTCCTCTTCTTCTT+CGG + chr8_1:23979682-23979701 None:intergenic 35.0%
GATATGTTTGTCGTGTTTGT+GGG - chr8_1:23979742-23979761 Msa1186060:intron 35.0%
ATATGTTTGTCGTGTTTGTG+GGG - chr8_1:23979743-23979762 Msa1186060:intron 35.0%
!!! TCTATGCACGAATGCTTTTT+TGG - chr8_1:23979822-23979841 Msa1186060:intron 35.0%
ATTAGGACATATTATGGCCT+GGG - chr8_1:23980200-23980219 Msa1186060:CDS 35.0%
! CTTTTCAAAGCAATTAACCC+AGG + chr8_1:23980220-23980239 None:intergenic 35.0%
!!! AAACGCATCCACTTTTTCTT+TGG + chr8_1:23980408-23980427 None:intergenic 35.0%
AAAGAAAAAGTGGATGCGTT+TGG - chr8_1:23980407-23980426 Msa1186060:CDS 35.0%
GATTGCTGAAGAAGATTTCT+TGG - chr8_1:23980436-23980455 Msa1186060:intron 35.0%
GAAAGTTGAATCCTTCAACT+TGG + chr8_1:23980511-23980530 None:intergenic 35.0%
!! AATATTGTCGACTTGGAAGA+AGG - chr8_1:23980679-23980698 Msa1186060:intron 35.0%
ACAGTGTATAGATCATAGAG+CGG + chr8_1:23980734-23980753 None:intergenic 35.0%
CTATGATCTATACACTGTGA+AGG - chr8_1:23980736-23980755 Msa1186060:intron 35.0%
!! AACTGGAGGTGTTAAAACAA+TGG - chr8_1:23980777-23980796 Msa1186060:intron 35.0%
TTTCCTAGGTGTTTGTACTT+TGG + chr8_1:23980984-23981003 None:intergenic 35.0%
TCAATGTTCTCAATCTTGTG+AGG - chr8_1:23981050-23981069 Msa1186060:intron 35.0%
GGTTGAGAATACATTACAGA+AGG - chr8_1:23981165-23981184 Msa1186060:intron 35.0%
! AGAAGGACCCAGATTTTAAA+AGG - chr8_1:23981182-23981201 Msa1186060:intron 35.0%
GTAGTAGTGAAGAACTTTAC+TGG + chr8_1:23981242-23981261 None:intergenic 35.0%
TGAAAACTCTCTTTGTTCAG+CGG + chr8_1:23981683-23981702 None:intergenic 35.0%
GAAGTTTAACAATTCACCTG+AGG - chr8_1:23981708-23981727 Msa1186060:intron 35.0%
! AAGACTTTCTTTTTCTGTCC+TGG + chr8_1:23981865-23981884 None:intergenic 35.0%
TCACCATACTTGTTTCAAGA+AGG - chr8_1:23981927-23981946 Msa1186060:intron 35.0%
ACTCCTTCTTGAAACAAGTA+TGG + chr8_1:23981933-23981952 None:intergenic 35.0%
ACACTTGATGTGAAAGAATG+TGG - chr8_1:23982015-23982034 Msa1186060:intron 35.0%
TGTATTTGTCAGGTAACATG+TGG - chr8_1:23982172-23982191 Msa1186060:intron 35.0%
GTATTTGTCAGGTAACATGT+GGG - chr8_1:23982173-23982192 Msa1186060:intron 35.0%
GTTGAGTAGAACAGGATATA+TGG + chr8_1:23982295-23982314 None:intergenic 35.0%
TATATCCTGTTCTACTCAAC+AGG - chr8_1:23982295-23982314 Msa1186060:CDS 35.0%
ATTGACTGTCATTAGTGTTC+CGG + chr8_1:23982395-23982414 None:intergenic 35.0%
CAACATACAGTGAACTGTTT+AGG - chr8_1:23982530-23982549 Msa1186060:five_prime_UTR 35.0%
TCACTCTTCTCCTTCACAAT+CGG - chr8_1:23974828-23974847 Msa1186060:three_prime_UTR 40.0%
! ATGCATGTTACCGATTGTGA+AGG + chr8_1:23974841-23974860 None:intergenic 40.0%
! ACTAAGTGGTCTTGACTACA+TGG + chr8_1:23975359-23975378 None:intergenic 40.0%
ATGTAGTCAAGACCACTTAG+TGG - chr8_1:23975358-23975377 Msa1186060:CDS 40.0%
! TCAAGACCACTTAGTGGATA+AGG - chr8_1:23975364-23975383 Msa1186060:CDS 40.0%
TGCTTATAATTGAGACCGGA+GGG + chr8_1:23975569-23975588 None:intergenic 40.0%
TTGCTTATAATTGAGACCGG+AGG + chr8_1:23975570-23975589 None:intergenic 40.0%
! TTGCTTATATTTGGGACTGG+TGG - chr8_1:23975688-23975707 Msa1186060:CDS 40.0%
! TGCTTATATTTGGGACTGGT+GGG - chr8_1:23975689-23975708 Msa1186060:CDS 40.0%
!!! GCATAAGTTTTGAGGCTGTT+TGG + chr8_1:23975815-23975834 None:intergenic 40.0%
TCAAGTAAGCCAATCCAAAC+AGG - chr8_1:23975847-23975866 Msa1186060:CDS 40.0%
AGGTCAGGCAGTAACAAAAA+GGG + chr8_1:23975991-23976010 None:intergenic 40.0%
AAGGTCAGGCAGTAACAAAA+AGG + chr8_1:23975992-23976011 None:intergenic 40.0%
!! GTAAAAAGGAGTGGACTGAA+AGG + chr8_1:23976011-23976030 None:intergenic 40.0%
! AAATGACTCAAGTCGGTTTC+AGG - chr8_1:23976082-23976101 Msa1186060:CDS 40.0%
CCTAGAAAGTGAAAAACCCT+CGG + chr8_1:23976112-23976131 None:intergenic 40.0%
AATCCACTTGTTTAGACGGA+GGG - chr8_1:23976160-23976179 Msa1186060:CDS 40.0%
!!! TTTAGACGGAGGGTTTTAGA+GGG - chr8_1:23976170-23976189 Msa1186060:CDS 40.0%
AATTCCTCCAGTGCTTGAAT+TGG - chr8_1:23976291-23976310 Msa1186060:CDS 40.0%
CCCACAGAATCAAATCAAAG+TGG + chr8_1:23976369-23976388 None:intergenic 40.0%
GTCAGGATATGGGAACAATT+AGG + chr8_1:23976394-23976413 None:intergenic 40.0%
TGCTGAATGGAGTTGAAAAC+CGG - chr8_1:23976500-23976519 Msa1186060:CDS 40.0%
ACTTAAACATGACGCTACCA+AGG + chr8_1:23976532-23976551 None:intergenic 40.0%
TTCTCCAGGTATTTCATCTG+AGG - chr8_1:23976856-23976875 Msa1186060:CDS 40.0%
AGTTTAGAGGGTGGAGAATA+TGG - chr8_1:23976983-23977002 Msa1186060:intron 40.0%
!! TGACATTTTGATCTGAGTGG+TGG + chr8_1:23977135-23977154 None:intergenic 40.0%
! TAGGGCACCAAAAAGAGAAA+AGG - chr8_1:23977189-23977208 Msa1186060:intron 40.0%
AAGAGAAAAGGATGTTCCTG+CGG - chr8_1:23977201-23977220 Msa1186060:intron 40.0%
!! TTTGGGTTGTATATCCCTTC+TGG - chr8_1:23977433-23977452 Msa1186060:intron 40.0%
! TTGGGTTGTATATCCCTTCT+GGG - chr8_1:23977434-23977453 Msa1186060:intron 40.0%
ACTGGGACACTTAAGACAAA+AGG + chr8_1:23977590-23977609 None:intergenic 40.0%
AACACATGTACAGGAACTCA+GGG + chr8_1:23977813-23977832 None:intergenic 40.0%
AAGTGCAGTTACTGAAGAGA+AGG - chr8_1:23977933-23977952 Msa1186060:intron 40.0%
TTTAGGAGAGAAGTTCTCTC+TGG - chr8_1:23978048-23978067 Msa1186060:intron 40.0%
! TTCATTGACGCAGAGCATTA+AGG - chr8_1:23978415-23978434 Msa1186060:intron 40.0%
TCTCCATAGTATGCATTAGG+AGG + chr8_1:23978663-23978682 None:intergenic 40.0%
TTCCTTGGGTTATCTTTAGG+AGG + chr8_1:23978717-23978736 None:intergenic 40.0%
TATTTGGAGGGAGATGTCAA+TGG - chr8_1:23978812-23978831 Msa1186060:intron 40.0%
AACAATGACCCAAACGAGTA+GGG + chr8_1:23978920-23978939 None:intergenic 40.0%
AAACAATGACCCAAACGAGT+AGG + chr8_1:23978921-23978940 None:intergenic 40.0%
!! CTATTAAGGAAGTACTGCAG+AGG + chr8_1:23978954-23978973 None:intergenic 40.0%
TCATCTTCCTTGGTCAGATA+AGG - chr8_1:23979000-23979019 Msa1186060:intron 40.0%
CATCTTCCTTGGTCAGATAA+GGG - chr8_1:23979001-23979020 Msa1186060:intron 40.0%
ATCTTCCTTGGTCAGATAAG+GGG - chr8_1:23979002-23979021 Msa1186060:intron 40.0%
ATCTGCAGAAACATCCTAGT+AGG + chr8_1:23979652-23979671 None:intergenic 40.0%
TCTTCTTCCTCTTCTTCTTC+GGG + chr8_1:23979681-23979700 None:intergenic 40.0%
GGATATGTTTGTCGTGTTTG+TGG - chr8_1:23979741-23979760 Msa1186060:intron 40.0%
GTTTGTGGGGTTATTGATAG+AGG - chr8_1:23979756-23979775 Msa1186060:intron 40.0%
TTTGGTTGGGTAAGACTAAG+AGG + chr8_1:23980165-23980184 None:intergenic 40.0%
CATTAGGACATATTATGGCC+TGG - chr8_1:23980199-23980218 Msa1186060:CDS 40.0%
!! TTCTTTGGCTTTCGACGAAT+CGG + chr8_1:23980393-23980412 None:intergenic 40.0%
GTCGAAAGCCAAAGAAAAAG+TGG - chr8_1:23980397-23980416 Msa1186060:CDS 40.0%
TTCATTTGATTAGCATGCCG+AGG + chr8_1:23980482-23980501 None:intergenic 40.0%
! TTGAATCCTTCAACTTGGTG+CGG + chr8_1:23980506-23980525 None:intergenic 40.0%
CAACTTTCTCGTCAGAAACT+TGG - chr8_1:23980523-23980542 Msa1186060:intron 40.0%
TTTCTCGTCAGAAACTTGGT+GGG - chr8_1:23980527-23980546 Msa1186060:intron 40.0%
CAAGTCGACAATATTCCCTT+GGG + chr8_1:23980674-23980693 None:intergenic 40.0%
AGGTGTTTGTACTTTGGCAA+GGG + chr8_1:23980978-23980997 None:intergenic 40.0%
TAGGTGTTTGTACTTTGGCA+AGG + chr8_1:23980979-23980998 None:intergenic 40.0%
TTGCCAAAGTACAAACACCT+AGG - chr8_1:23980978-23980997 Msa1186060:intron 40.0%
CCAGACAATACAACTTTCCT+AGG + chr8_1:23980998-23981017 None:intergenic 40.0%
CCTAGGAAAGTTGTATTGTC+TGG - chr8_1:23980995-23981014 Msa1186060:intron 40.0%
!! GAGGCCGAAGTTTTTAAAGA+TGG - chr8_1:23981069-23981088 Msa1186060:intron 40.0%
TCAACTTCAATCTTCTGCCT+GGG + chr8_1:23981328-23981347 None:intergenic 40.0%
CTGCAATTGCCTTCAACTTT+GGG + chr8_1:23981417-23981436 None:intergenic 40.0%
TCTGCAATTGCCTTCAACTT+TGG + chr8_1:23981418-23981437 None:intergenic 40.0%
TGACTCCATCTCTCATATCA+AGG + chr8_1:23981495-23981514 None:intergenic 40.0%
TGAACCTATGTGAATCAGCT+GGG - chr8_1:23981539-23981558 Msa1186060:intron 40.0%
! TTTGGCTCAATCAAAGCATG+TGG - chr8_1:23981742-23981761 Msa1186060:intron 40.0%
TCAATCAAAGCATGTGGTGA+AGG - chr8_1:23981748-23981767 Msa1186060:intron 40.0%
CAATCAAAGCATGTGGTGAA+GGG - chr8_1:23981749-23981768 Msa1186060:intron 40.0%
ATGTGGTGAAGGGATTTCAT+TGG - chr8_1:23981759-23981778 Msa1186060:intron 40.0%
! GTGAAGGGATTTCATTGGTT+GGG - chr8_1:23981764-23981783 Msa1186060:intron 40.0%
! TGAAGGGATTTCATTGGTTG+GGG - chr8_1:23981765-23981784 Msa1186060:intron 40.0%
AACATCCAAGATGATGACAC+GGG + chr8_1:23981794-23981813 None:intergenic 40.0%
GAACATCCAAGATGATGACA+CGG + chr8_1:23981795-23981814 None:intergenic 40.0%
TAGCTTGACGAGTAACAGAT+GGG + chr8_1:23981825-23981844 None:intergenic 40.0%
ATAGCTTGACGAGTAACAGA+TGG + chr8_1:23981826-23981845 None:intergenic 40.0%
TCTGTTACTCGTCAAGCTAT+TGG - chr8_1:23981826-23981845 Msa1186060:intron 40.0%
! AAGCTATTGGTCGTGCTTTT+CGG - chr8_1:23981839-23981858 Msa1186060:intron 40.0%
GTGTTTCAACTTCAAATGCG+CGG + chr8_1:23981999-23982018 None:intergenic 40.0%
TTACGTCTTCCCCTAACAAT+GGG + chr8_1:23982059-23982078 None:intergenic 40.0%
TTTACGTCTTCCCCTAACAA+TGG + chr8_1:23982060-23982079 None:intergenic 40.0%
TCAATCCTGTTGAGTAGAAC+AGG + chr8_1:23982303-23982322 None:intergenic 40.0%
AATGACAGTCAATCAGAGTG+TGG - chr8_1:23982402-23982421 Msa1186060:intron 40.0%
CAGTTTGCAACTCTCTACAT+TGG + chr8_1:23982476-23982495 None:intergenic 40.0%
ACAGTGAACTGTTTAGGGAT+TGG - chr8_1:23982536-23982555 Msa1186060:five_prime_UTR 40.0%
CAGTGAACTGTTTAGGGATT+GGG - chr8_1:23982537-23982556 Msa1186060:five_prime_UTR 40.0%
! ACCACTTAGTGGATAAGGCA+TGG - chr8_1:23975369-23975388 Msa1186060:CDS 45.0%
ACCATGCCTTATCCACTAAG+TGG + chr8_1:23975373-23975392 None:intergenic 45.0%
GTCGTGCATGTAAAAAGGAG+TGG + chr8_1:23976020-23976039 None:intergenic 45.0%
GAACGGTCGTGCATGTAAAA+AGG + chr8_1:23976025-23976044 None:intergenic 45.0%
TACTACCTCCAACCAGTGAA+CGG + chr8_1:23976042-23976061 None:intergenic 45.0%
! CCGAGGGTTTTTCACTTTCT+AGG - chr8_1:23976109-23976128 Msa1186060:CDS 45.0%
CAATCCACTTGTTTAGACGG+AGG - chr8_1:23976159-23976178 Msa1186060:CDS 45.0%
AAACCCTCCGTCTAAACAAG+TGG + chr8_1:23976166-23976185 None:intergenic 45.0%
!! GTTTAGACGGAGGGTTTTAG+AGG - chr8_1:23976169-23976188 Msa1186060:CDS 45.0%
!!! TTAGACGGAGGGTTTTAGAG+GGG - chr8_1:23976171-23976190 Msa1186060:CDS 45.0%
!!! GAGGGTTTTAGAGGGGAAAT+GGG - chr8_1:23976178-23976197 Msa1186060:CDS 45.0%
GGAAATGGGAACTGAATGAC+TGG - chr8_1:23976192-23976211 Msa1186060:CDS 45.0%
TAGCAGGAAGGTCAGGATAT+GGG + chr8_1:23976404-23976423 None:intergenic 45.0%
TTAGCAGGAAGGTCAGGATA+TGG + chr8_1:23976405-23976424 None:intergenic 45.0%
!!! GTGTTTTTAGCAGGAAGGTC+AGG + chr8_1:23976411-23976430 None:intergenic 45.0%
!! TTGAAAACCGGTGTTGTCCT+TGG - chr8_1:23976512-23976531 Msa1186060:CDS 45.0%
GCATCTGTGCATTCATCCTA+AGG + chr8_1:23976620-23976639 None:intergenic 45.0%
GAATGCACAGATGCACATGT+TGG - chr8_1:23976626-23976645 Msa1186060:CDS 45.0%
GATGCACATGTTGGAACATG+TGG - chr8_1:23976635-23976654 Msa1186060:CDS 45.0%
CCTTCCTCAGATGAAATACC+TGG + chr8_1:23976863-23976882 None:intergenic 45.0%
CCAGGTATTTCATCTGAGGA+AGG - chr8_1:23976860-23976879 Msa1186060:CDS 45.0%
!! ACCTTAGCTTGTGCTGAACA+TGG + chr8_1:23976920-23976939 None:intergenic 45.0%
CTTGAAAGTGGTGACAGATC+AGG - chr8_1:23977099-23977118 Msa1186060:intron 45.0%
ATTCAGACGAGGAGGATGAT+AGG - chr8_1:23977248-23977267 Msa1186060:intron 45.0%
TTCAGACGAGGAGGATGATA+GGG - chr8_1:23977249-23977268 Msa1186060:intron 45.0%
AGGATTACAAAAGCAGGGCA+AGG + chr8_1:23977397-23977416 None:intergenic 45.0%
TGGGTTGTATATCCCTTCTG+GGG - chr8_1:23977435-23977454 Msa1186060:intron 45.0%
TCAGTCAAATGACCCCAGAA+GGG + chr8_1:23977450-23977469 None:intergenic 45.0%
TTCAGTCAAATGACCCCAGA+AGG + chr8_1:23977451-23977470 None:intergenic 45.0%
CAACACATGTACAGGAACTC+AGG + chr8_1:23977814-23977833 None:intergenic 45.0%
CTGAGTTCCTGTACATGTGT+TGG - chr8_1:23977812-23977831 Msa1186060:intron 45.0%
AATTGGGCCAACACATGTAC+AGG + chr8_1:23977822-23977841 None:intergenic 45.0%
! ACATGTGTTGGCCCAATTGT+TGG - chr8_1:23977824-23977843 Msa1186060:intron 45.0%
! CATGTGTTGGCCCAATTGTT+GGG - chr8_1:23977825-23977844 Msa1186060:intron 45.0%
AAGCTGTGCTTGTGTGGATT+GGG + chr8_1:23977851-23977870 None:intergenic 45.0%
! TTCTAGAAGCTGTGCTTGTG+TGG + chr8_1:23977857-23977876 None:intergenic 45.0%
TAGAAGCCAGTAGAAGCTGT+GGG - chr8_1:23977872-23977891 Msa1186060:intron 45.0%
TGTATTCCCACAGCTTCTAC+TGG + chr8_1:23977881-23977900 None:intergenic 45.0%
TGAAGAGAAGGAAGCCTAGA+GGG - chr8_1:23977945-23977964 Msa1186060:intron 45.0%
AGAGAAGTTCTCTCTGGTCT+AGG - chr8_1:23978054-23978073 Msa1186060:intron 45.0%
TGAGCATCTAACGATCCCTA+TGG + chr8_1:23978296-23978315 None:intergenic 45.0%
! AAAGCCTTTTCCCACTACGT+GGG + chr8_1:23978474-23978493 None:intergenic 45.0%
TATCTAGCCGACCCCAAAAT+GGG - chr8_1:23978507-23978526 Msa1186060:CDS 45.0%
CATCCTCCCAATGCTTACAA+TGG - chr8_1:23978603-23978622 Msa1186060:CDS 45.0%
!! TCTCCATTGTAAGCATTGGG+AGG + chr8_1:23978609-23978628 None:intergenic 45.0%
CTGCCTCCTAATGCATACTA+TGG - chr8_1:23978657-23978676 Msa1186060:CDS 45.0%
TGCATACTATGGAGAAAGCG+CGG - chr8_1:23978668-23978687 Msa1186060:CDS 45.0%
TGCCTCCTAAAGATAACCCA+AGG - chr8_1:23978712-23978731 Msa1186060:intron 45.0%
! GTGGTTGATGCTGAAGATGA+CGG - chr8_1:23978780-23978799 Msa1186060:intron 45.0%
! TGGTTGATGCTGAAGATGAC+GGG - chr8_1:23978781-23978800 Msa1186060:intron 45.0%
!! ATGACGGGCTAGAGGATATT+TGG - chr8_1:23978796-23978815 Msa1186060:intron 45.0%
ACAATGACCCAAACGAGTAG+GGG + chr8_1:23978919-23978938 None:intergenic 45.0%
CTGAGACAACTCATCTTCCT+TGG - chr8_1:23978990-23979009 Msa1186060:intron 45.0%
TCTTCCTTGGTCAGATAAGG+GGG - chr8_1:23979003-23979022 Msa1186060:intron 45.0%
ATTTCCCCCTTATCTGACCA+AGG + chr8_1:23979010-23979029 None:intergenic 45.0%
TTGGTCAGATAAGGGGGAAA+TGG - chr8_1:23979009-23979028 Msa1186060:intron 45.0%
!! ACACCGATTCCTTCTTTCGA+TGG - chr8_1:23979081-23979100 Msa1186060:intron 45.0%
!! CACCGATTCCTTCTTTCGAT+GGG - chr8_1:23979082-23979101 Msa1186060:intron 45.0%
! ACCGATTCCTTCTTTCGATG+GGG - chr8_1:23979083-23979102 Msa1186060:intron 45.0%
ACCCCATCGAAAGAAGGAAT+CGG + chr8_1:23979087-23979106 None:intergenic 45.0%
GTAACAACCCCATCGAAAGA+AGG + chr8_1:23979093-23979112 None:intergenic 45.0%
!! TGAAGGTTAAAAGGAGCACC+AGG - chr8_1:23980357-23980376 Msa1186060:CDS 45.0%
CGAATCGGACATATAAGTCC+TGG + chr8_1:23980378-23980397 None:intergenic 45.0%
TTGATTAGCATGCCGAGGAT+GGG + chr8_1:23980477-23980496 None:intergenic 45.0%
TTTGATTAGCATGCCGAGGA+TGG + chr8_1:23980478-23980497 None:intergenic 45.0%
! ATGAAACCGCACCAAGTTGA+AGG - chr8_1:23980497-23980516 Msa1186060:intron 45.0%
CTTTCTCGTCAGAAACTTGG+TGG - chr8_1:23980526-23980545 Msa1186060:intron 45.0%
ATGAAAGTCTTTCCCGATCC+TGG + chr8_1:23980587-23980606 None:intergenic 45.0%
CCAAGTCGACAATATTCCCT+TGG + chr8_1:23980675-23980694 None:intergenic 45.0%
! CCAAGGGAATATTGTCGACT+TGG - chr8_1:23980672-23980691 Msa1186060:intron 45.0%
GGAAGAAGGAGTTTCAAACG+TGG - chr8_1:23980693-23980712 Msa1186060:intron 45.0%
AGCGTTTCACGCTAGGTATA+TGG + chr8_1:23981135-23981154 None:intergenic 45.0%
CGTGAAACGCTTTGACGATT+TGG - chr8_1:23981144-23981163 Msa1186060:intron 45.0%
! GATTTTCTTGACGAGCTTCC+TGG - chr8_1:23981268-23981287 Msa1186060:intron 45.0%
CTCAACTTCAATCTTCTGCC+TGG + chr8_1:23981329-23981348 None:intergenic 45.0%
GTATCTGCACCCAAAGTTGA+AGG - chr8_1:23981405-23981424 Msa1186060:intron 45.0%
GCAGACCTTGATATGAGAGA+TGG - chr8_1:23981487-23981506 Msa1186060:intron 45.0%
CTGAACCTATGTGAATCAGC+TGG - chr8_1:23981538-23981557 Msa1186060:intron 45.0%
GAACCTATGTGAATCAGCTG+GGG - chr8_1:23981540-23981559 Msa1186060:intron 45.0%
! TTTCCCCAGCTGATTCACAT+AGG + chr8_1:23981546-23981565 None:intergenic 45.0%
ATCAGCTGGGGAAAAACTTC+TGG - chr8_1:23981552-23981571 Msa1186060:intron 45.0%
! TGGAAAGGTTAGCCATGAAG+TGG - chr8_1:23981608-23981627 Msa1186060:intron 45.0%
! AAGGTTAGCCATGAAGTGGA+AGG - chr8_1:23981612-23981631 Msa1186060:intron 45.0%
! AGGTTAGCCATGAAGTGGAA+GGG - chr8_1:23981613-23981632 Msa1186060:intron 45.0%
GGTGAAGGGATTTCATTGGT+TGG - chr8_1:23981763-23981782 Msa1186060:intron 45.0%
GTATGGTGATCTTCCTCTTC+TGG + chr8_1:23981916-23981935 None:intergenic 45.0%
TTTCTCGAGAGCCCATTGTT+AGG - chr8_1:23982045-23982064 Msa1186060:intron 45.0%
TTCTCGAGAGCCCATTGTTA+GGG - chr8_1:23982046-23982065 Msa1186060:intron 45.0%
CTTATTCACAAGTCTTCCGC+CGG - chr8_1:23982373-23982392 Msa1186060:intron 45.0%
GAACTGTTTAGGGATTGGGA+TGG - chr8_1:23982541-23982560 Msa1186060:five_prime_UTR 45.0%
CAATAGCAATGTCAGAGCAG+AGG + chr8_1:23982621-23982640 None:intergenic 45.0%
!!! TTTAAAAAATTTAGAATTAA+AGG - chr8_1:23976252-23976271 Msa1186060:CDS 5.0%
!! TAAATAAATAAAAAATAAAG+GGG + chr8_1:23976453-23976472 None:intergenic 5.0%
! TCTGGAGCAGAGTGTTTAGC+TGG + chr8_1:23974980-23974999 None:intergenic 50.0%
GCTAAACACTCTGCTCCAGA+TGG - chr8_1:23974980-23974999 Msa1186060:intron 50.0%
TCGCCAGTGTTCATGCATGT+TGG - chr8_1:23975240-23975259 Msa1186060:CDS 50.0%
GGTCCAACATGCATGAACAC+TGG + chr8_1:23975246-23975265 None:intergenic 50.0%
!! AAGGAGTGGACTGAAAGGTC+AGG + chr8_1:23976006-23976025 None:intergenic 50.0%
TTACATGCACGACCGTTCAC+TGG - chr8_1:23976027-23976046 Msa1186060:CDS 50.0%
!!! GGAGGGTTTTAGAGGGGAAA+TGG - chr8_1:23976177-23976196 Msa1186060:CDS 50.0%
TCCTCCAGTGCTTGAATTGG+AGG - chr8_1:23976294-23976313 Msa1186060:CDS 50.0%
CCTCCAGTGCTTGAATTGGA+GGG - chr8_1:23976295-23976314 Msa1186060:CDS 50.0%
CTCCAGTGCTTGAATTGGAG+GGG - chr8_1:23976296-23976315 Msa1186060:CDS 50.0%
TACCCCTCCAATTCAAGCAC+TGG + chr8_1:23976301-23976320 None:intergenic 50.0%
AGTGCTTGAATTGGAGGGGT+AGG - chr8_1:23976300-23976319 Msa1186060:CDS 50.0%
GTGCTTGAATTGGAGGGGTA+GGG - chr8_1:23976301-23976320 Msa1186060:CDS 50.0%
TGCTTGAATTGGAGGGGTAG+GGG - chr8_1:23976302-23976321 Msa1186060:CDS 50.0%
TGGATTGACGAGCTGCTGAA+TGG - chr8_1:23976487-23976506 Msa1186060:CDS 50.0%
GCCATGTTCAGCACAAGCTA+AGG - chr8_1:23976916-23976935 Msa1186060:intron 50.0%
!! AATGCAGGAGACTGCCGTTT+TGG + chr8_1:23977313-23977332 None:intergenic 50.0%
CAGGGTTCTGTCAGCATCAT+AGG + chr8_1:23977795-23977814 None:intergenic 50.0%
!! GTGGATTGGGCCCAACAATT+GGG + chr8_1:23977838-23977857 None:intergenic 50.0%
!! TGTGGATTGGGCCCAACAAT+TGG + chr8_1:23977839-23977858 None:intergenic 50.0%
GAAGCTGTGCTTGTGTGGAT+TGG + chr8_1:23977852-23977871 None:intergenic 50.0%
CTAGAAGCCAGTAGAAGCTG+TGG - chr8_1:23977871-23977890 Msa1186060:intron 50.0%
CTGAAGAGAAGGAAGCCTAG+AGG - chr8_1:23977944-23977963 Msa1186060:intron 50.0%
TAAAAGAGGGGGGAGTCTAG+AGG - chr8_1:23977996-23978015 Msa1186060:intron 50.0%
!! TCTAGGAGCTTAGCTCTGGT+AGG - chr8_1:23978071-23978090 Msa1186060:intron 50.0%
GGTAGGAGTTCTCTGAACTC+TGG - chr8_1:23978088-23978107 Msa1186060:intron 50.0%
CGGGGTTCTATCAGATGCTA+TGG - chr8_1:23978193-23978212 Msa1186060:intron 50.0%
! AAGCCTTTTCCCACTACGTG+GGG + chr8_1:23978473-23978492 None:intergenic 50.0%
! CAAAGCCTTTTCCCACTACG+TGG + chr8_1:23978475-23978494 None:intergenic 50.0%
GTATCTAGCCGACCCCAAAA+TGG - chr8_1:23978506-23978525 Msa1186060:CDS 50.0%
!!! TCCCTTTCCCATTTTGGGGT+CGG + chr8_1:23978517-23978536 None:intergenic 50.0%
!! ACGGGCTAGAGGATATTTGG+AGG - chr8_1:23978799-23978818 Msa1186060:intron 50.0%
! CGGGCTAGAGGATATTTGGA+GGG - chr8_1:23978800-23978819 Msa1186060:intron 50.0%
TCTTCCTCTTCTTCTTCGGG+CGG + chr8_1:23979678-23979697 None:intergenic 50.0%
CTCCTCTGTTGTGGGAAAAG+TGG - chr8_1:23980096-23980115 Msa1186060:CDS 50.0%
!! CACCACTTTTCCCACAACAG+AGG + chr8_1:23980101-23980120 None:intergenic 50.0%
CTCTGTTGTGGGAAAAGTGG+TGG - chr8_1:23980099-23980118 Msa1186060:CDS 50.0%
CTGACATATCAGCCCATCCT+CGG - chr8_1:23980462-23980481 Msa1186060:intron 50.0%
ACCACTAGAGGTCGAGCATT+GGG + chr8_1:23980647-23980666 None:intergenic 50.0%
GGAGTTTCAAACGTGGCAAG+TGG - chr8_1:23980700-23980719 Msa1186060:intron 50.0%
TGACAGCAGATCTCAGCAAC+TGG - chr8_1:23980760-23980779 Msa1186060:intron 50.0%
! TCGTCAAAGCGTTTCACGCT+AGG + chr8_1:23981142-23981161 None:intergenic 50.0%
ACAGTGAAATCTACCAGGCC+AGG + chr8_1:23981289-23981308 None:intergenic 50.0%
TGGCCTGGTAGATTTCACTG+TGG - chr8_1:23981288-23981307 Msa1186060:intron 50.0%
GCACCACAGTGAAATCTACC+AGG + chr8_1:23981294-23981313 None:intergenic 50.0%
TAGCCATGAAGTGGAAGGGT+TGG - chr8_1:23981617-23981636 Msa1186060:intron 50.0%
ACTCCAACCCTTCCACTTCA+TGG + chr8_1:23981623-23981642 None:intergenic 50.0%
AAGTGGAAGGGTTGGAGTCT+CGG - chr8_1:23981625-23981644 Msa1186060:intron 50.0%
!! AGCTGCTGATTCTCCAGAAG+AGG - chr8_1:23981900-23981919 Msa1186060:intron 50.0%
TCTCGAGAGCCCATTGTTAG+GGG - chr8_1:23982047-23982066 Msa1186060:intron 50.0%
GACTGTCATTAGTGTTCCGG+CGG + chr8_1:23982392-23982411 None:intergenic 50.0%
ATGCACGACCGTTCACTGGT+TGG - chr8_1:23976031-23976050 Msa1186060:CDS 55.0%
! AGTCGGTTTCAGGTGAACCG+AGG - chr8_1:23976092-23976111 Msa1186060:CDS 55.0%
! GTCGGTTTCAGGTGAACCGA+GGG - chr8_1:23976093-23976112 Msa1186060:CDS 55.0%
!! CCCTCCAATTCAAGCACTGG+AGG + chr8_1:23976298-23976317 None:intergenic 55.0%
GACGCTACCAAGGACAACAC+CGG + chr8_1:23976522-23976541 None:intergenic 55.0%
CTGGTCTAGGAGCTTAGCTC+TGG - chr8_1:23978067-23978086 Msa1186060:intron 55.0%
ATCTAGCAGACCCCACGTAG+TGG - chr8_1:23978460-23978479 Msa1186060:CDS 55.0%
TCTAGCAGACCCCACGTAGT+GGG - chr8_1:23978461-23978480 Msa1186060:CDS 55.0%
! AGACCCCACGTAGTGGGAAA+AGG - chr8_1:23978467-23978486 Msa1186060:CDS 55.0%
AGCCGACCCCAAAATGGGAA+AGG - chr8_1:23978512-23978531 Msa1186060:CDS 55.0%
GCCGACCCCAAAATGGGAAA+GGG - chr8_1:23978513-23978532 Msa1186060:CDS 55.0%
!! TGCTGAAGATGACGGGCTAG+AGG - chr8_1:23978788-23978807 Msa1186060:intron 55.0%
! AACTTGGTGGGAGACCATCC+CGG - chr8_1:23980539-23980558 Msa1186060:intron 55.0%
TCCCAATGCTCGACCTCTAG+TGG - chr8_1:23980643-23980662 Msa1186060:intron 55.0%
CACCACTAGAGGTCGAGCAT+TGG + chr8_1:23980648-23980667 None:intergenic 55.0%
ACCTCTAGTGGTGCTTCCCA+AGG - chr8_1:23980655-23980674 Msa1186060:intron 55.0%
CCTCTAGTGGTGCTTCCCAA+GGG - chr8_1:23980656-23980675 Msa1186060:intron 55.0%
CAGCAGATCTCAGCAACTGG+AGG - chr8_1:23980763-23980782 Msa1186060:intron 55.0%
TGGTGCTCAAACTTACGCCC+AGG - chr8_1:23981308-23981327 Msa1186060:intron 55.0%
GGCATCCCGTGTCATCATCT+TGG - chr8_1:23981786-23981805 Msa1186060:intron 55.0%
! ATTGGTCGTGCTTTTCGGCC+AGG - chr8_1:23981844-23981863 Msa1186060:intron 55.0%
! CACGACCGTTCACTGGTTGG+AGG - chr8_1:23976034-23976053 Msa1186060:CDS 60.0%
GAGGGGGGAGTCTAGAGGTA+AGG - chr8_1:23978001-23978020 Msa1186060:intron 60.0%
TCCTCCGCCCGAAGAAGAAG+AGG - chr8_1:23979671-23979690 Msa1186060:intron 60.0%
TCCTCTTCTTCTTCGGGCGG+AGG + chr8_1:23979675-23979694 None:intergenic 60.0%
! ACTTGGTGGGAGACCATCCC+GGG - chr8_1:23980540-23980559 Msa1186060:intron 60.0%
ATGAGCCAGGATGCATCCCC+CGG + chr8_1:23980561-23980580 None:intergenic 60.0%
TGCATCCTGGCTCATGCTCC+AGG - chr8_1:23980566-23980585 Msa1186060:intron 60.0%
CCTGGCTCATGCTCCAGGAT+CGG - chr8_1:23980571-23980590 Msa1186060:intron 60.0%
CTGGCTCATGCTCCAGGATC+GGG - chr8_1:23980572-23980591 Msa1186060:intron 60.0%
!! CCCTTGGGAAGCACCACTAG+AGG + chr8_1:23980659-23980678 None:intergenic 60.0%
GCCTATCGTCCGACGCATTC+AGG - chr8_1:23981102-23981121 Msa1186060:intron 60.0%
GCCTGAATGCGTCGGACGAT+AGG + chr8_1:23981106-23981125 None:intergenic 60.0%
TCGTCCGACGCATTCAGGCT+AGG - chr8_1:23981107-23981126 Msa1186060:intron 60.0%
CGTCCGACGCATTCAGGCTA+GGG - chr8_1:23981108-23981127 Msa1186060:intron 60.0%
GGACCCTAGCCTGAATGCGT+CGG + chr8_1:23981114-23981133 None:intergenic 60.0%
TCTTGACGAGCTTCCTGGCC+TGG - chr8_1:23981273-23981292 Msa1186060:intron 60.0%
!! ACAACAGGGCATGGTGCCGC+AGG + chr8_1:23977220-23977239 None:intergenic 65.0%
CTTGGTGGGAGACCATCCCG+GGG - chr8_1:23980541-23980560 Msa1186060:intron 65.0%
TTGGTGGGAGACCATCCCGG+GGG - chr8_1:23980542-23980561 Msa1186060:intron 65.0%
TGAGCCAGGATGCATCCCCC+GGG + chr8_1:23980560-23980579 None:intergenic 65.0%
CCGATCCTGGAGCATGAGCC+AGG + chr8_1:23980574-23980593 None:intergenic 65.0%
CCAGGATGCATCCCCCGGGA+TGG + chr8_1:23980556-23980575 None:intergenic 70.0%
CCATCCCGGGGGATGCATCC+TGG - chr8_1:23980553-23980572 Msa1186060:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 23974618 23982677 23974618 ID=Msa1186060;Name=Msa1186060
chr8_1 mRNA 23974618 23982677 23974618 ID=Msa1186060-mRNA-1;Parent=Msa1186060;Name=Msa1186060-mRNA-1;_AED=0.03;_eAED=0.03;_QI=251|0.85|0.87|1|0.85|0.75|8|274|923
chr8_1 exon 23974618 23974953 23974618 ID=Msa1186060-mRNA-1:exon:8729;Parent=Msa1186060-mRNA-1
chr8_1 exon 23975051 23975111 23975051 ID=Msa1186060-mRNA-1:exon:8728;Parent=Msa1186060-mRNA-1
chr8_1 exon 23975221 23976933 23975221 ID=Msa1186060-mRNA-1:exon:8727;Parent=Msa1186060-mRNA-1
chr8_1 exon 23977486 23977638 23977486 ID=Msa1186060-mRNA-1:exon:8726;Parent=Msa1186060-mRNA-1
chr8_1 exon 23978444 23978698 23978444 ID=Msa1186060-mRNA-1:exon:8725;Parent=Msa1186060-mRNA-1
chr8_1 exon 23979953 23980431 23979953 ID=Msa1186060-mRNA-1:exon:8724;Parent=Msa1186060-mRNA-1
chr8_1 exon 23982294 23982361 23982294 ID=Msa1186060-mRNA-1:exon:8723;Parent=Msa1186060-mRNA-1
chr8_1 exon 23982446 23982677 23982446 ID=Msa1186060-mRNA-1:exon:8722;Parent=Msa1186060-mRNA-1
chr8_1 five_prime_UTR 23982446 23982677 23982446 ID=Msa1186060-mRNA-1:five_prime_utr;Parent=Msa1186060-mRNA-1
chr8_1 five_prime_UTR 23982343 23982361 23982343 ID=Msa1186060-mRNA-1:five_prime_utr;Parent=Msa1186060-mRNA-1
chr8_1 CDS 23982294 23982342 23982294 ID=Msa1186060-mRNA-1:cds;Parent=Msa1186060-mRNA-1
chr8_1 CDS 23979953 23980431 23979953 ID=Msa1186060-mRNA-1:cds;Parent=Msa1186060-mRNA-1
chr8_1 CDS 23978444 23978698 23978444 ID=Msa1186060-mRNA-1:cds;Parent=Msa1186060-mRNA-1
chr8_1 CDS 23977486 23977638 23977486 ID=Msa1186060-mRNA-1:cds;Parent=Msa1186060-mRNA-1
chr8_1 CDS 23975221 23976933 23975221 ID=Msa1186060-mRNA-1:cds;Parent=Msa1186060-mRNA-1
chr8_1 CDS 23975051 23975111 23975051 ID=Msa1186060-mRNA-1:cds;Parent=Msa1186060-mRNA-1
chr8_1 CDS 23974892 23974953 23974892 ID=Msa1186060-mRNA-1:cds;Parent=Msa1186060-mRNA-1
chr8_1 three_prime_UTR 23974618 23974891 23974618 ID=Msa1186060-mRNA-1:three_prime_utr;Parent=Msa1186060-mRNA-1
Gene Sequence

>Msa1186060

ATGGATTCATCGGTTCAGTTGTTACCAGCTAAACACTCTGCTCCAGATGGTATTTCATCTGAGGAAGGATGCAAAAAACTTAAGTTATCAAGTGATGGTTTGCCATGTTCAGCACAAGCTAAGGTTGTTGATTACAGTAATCCGTATGCAATCACAGAAGTTTTAAACAGTTTAGAGGGTGGAGAATATGGTAGTGTGACAAAGGATATTGATGCCCTTATAACCCGAAAAATGCAAGTATTAGGCCCCTACTTTGCTAAATATCCTACCCTTATTGATCGATTCTTGAAAGTGGTGACAGATCAGGATGAAAAAAGCCACCACTCAGATCAAAATGTCATAGATTTGGATGAGGAACAAATTCAAAGGGATGCTAGGGCACCAAAAAGAGAAAAGGATGTTCCTGCGGCACCATGCCCTGTTGTTATAATTGATTCAGACGAGGAGGATGATAGGGATCAGAAGTCTTTTCATGCGTATCATGAAGTTGTTTTGCCAAAACGGCAGTCTCCTGCATTAAAAATGATTGGATATCATCCTCCCAATGCTTACAATGGAGAAAGTTCAGATCTAAAATTTGAAACAAGTCTGCCTCCTAATGCATACTATGGAGAAAGCGCGGATAAAAAATTTGAAAAAAAACTGCCTCCTAAAGATAACCCAAGGAAAGATAAAGGTGTTTATCTTGGTGTACAAGAGGAAGAAGATAATGTGGTTGATGCTGAAGATGACGGGCTAGAGGATATTTGGAGGGAGATGTCAATGGCAATAGAAACTTCTAAAGATGTTTCTGCAGATCCTCCGCCCGAAGAAGAAGAGGAAGAAGATGCTGACTGCGATCACTCTTTTGTTCTAAAAGACGATCTTGGATATGTTTGTCGTGTTTGTGGGGTTATTGATAGAGGAATTGAAACCATATTTGAGTTTCAATACAAGGTTAAAAGGAGCACCAGGACTTATATGTCCGATTCGTCGAAAGCCAAAGAAAAAGTGGATGCGTTTGGAGTGAAGATTGCTGAAGAAGATTTCTTGGTAACTGACATATCAGCCCATCCTCGGCATGCTAATCAAATGAAACCGCACCAAGTTGAAGGATTCAACTTTCTCGTCAGAAACTTGGTGGGAGACCATCCCGGGGGATGCATCCTGGCTCATGCTCCAGGATCGGGAAAGACTTTCATGATTATCAGTTTCATGCAAAGTTTTCTAGGAAAGTATCCCAATGCTCGACCTCTAGTGGTGCTTCCCAAGGGAATATTGTCGACTTGGAAGAAGGAGTTTCAAACGTGGCAAGTGGAAGATATACCGCTCTATGATCTATACACTGTGAAGGCTGACAGCAGATCTCAGCAACTGGAGGTGTTAAAACAATGGATGAATAACAAAAGTATCCTTTTCTTAGGATACAAACAGTTTTCTTCCATTGTGTGTGATAATAGTAATAACAATGCATCAATATCATGCCAAGAGATATTGCTTAAAGTTCCCTCAATTCTCATTTTAGATGAGGGACACACTCCAAGAAATGAGAATACAGATATGGTACAGTCCCTTGCCAAAGTACAAACACCTAGGAAAGTTGTATTGTCTGGAACTCTTTATCAAAATCATGTTAGGGAGGTTTTCAATGTTCTCAATCTTGTGAGGCCGAAGTTTTTAAAGATGGAAACATCTAAGCCTATCGTCCGACGCATTCAGGCTAGGGTCCATATACCTAGCGTGAAACGCTTTGACGATTTGGTTGAGAATACATTACAGAAGGACCCAGATTTTAAAAGGAAAGTTGCTGTAATTCATGATTTGCGTGAGATGACCAGTAAAGTTCTTCACTACTACAAAGGCGATTTTCTTGACGAGCTTCCTGGCCTGGTAGATTTCACTGTGGTGCTCAAACTTACGCCCAGGCAGAAGATTGAAGTTGAGAAAGCAAAGAAGATGTATATTAGAAAGTTCAAATTTTCTTCTGTAGGCAGTGCAGTGTATCTGCACCCAAAGTTGAAGGCAATTGCAGAGAAATGTGATGAAAATTCCATATCTGATCATATCATGGATGATTTTATAGCAGACCTTGATATGAGAGATGGAGTCAAATCAAAGTTCTTTCGCAATATGCTGAACCTATGTGAATCAGCTGGGGAAAAACTTCTGGTGTTCAGTCAATATCTATTGCCTTTGAAATATTTGGAAAGGTTAGCCATGAAGTGGAAGGGTTGGAGTCTCGGAAAAGAAATCTTCGTGATTTCAGGAGAATCTTCCGCTGAACAAAGAGAGTTTTCAATGGAGAAGTTTAACAATTCACCTGAGGCAAAAATATTTTTTGGCTCAATCAAAGCATGTGGTGAAGGGATTTCATTGGTTGGGGCATCCCGTGTCATCATCTTGGATGTTCATCTCAACCCATCTGTTACTCGTCAAGCTATTGGTCGTGCTTTTCGGCCAGGACAGAAAAAGAAAGTCTTTGTGTATCGTTTGATAGCTGCTGATTCTCCAGAAGAGGAAGATCACCATACTTGTTTCAAGAAGGAGTTAATCTCAAAAATGTGGTTTGAATGGAATGAATATTGTGGTGACCGCGCATTTGAAGTTGAAACACTTGATGTGAAAGAATGTGGTGATCTATTTCTCGAGAGCCCATTGTTAGGGGAAGACGTAACATGTGGGCATTCAAACAAGCTAAATTCTATATCAAATAGAGATGGAATATTTGAAGGAGTTTCGGAAAAGACTATGCTCTTAGCTGACTTATTCACAAGTCTTCCGCCGGAACACTAA

Protein sequence

>Msa1186060

MDSSVQLLPAKHSAPDGISSEEGCKKLKLSSDGLPCSAQAKVVDYSNPYAITEVLNSLEGGEYGSVTKDIDALITRKMQVLGPYFAKYPTLIDRFLKVVTDQDEKSHHSDQNVIDLDEEQIQRDARAPKREKDVPAAPCPVVIIDSDEEDDRDQKSFHAYHEVVLPKRQSPALKMIGYHPPNAYNGESSDLKFETSLPPNAYYGESADKKFEKKLPPKDNPRKDKGVYLGVQEEEDNVVDAEDDGLEDIWREMSMAIETSKDVSADPPPEEEEEEDADCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKVKRSTRTYMSDSSKAKEKVDAFGVKIAEEDFLVTDISAHPRHANQMKPHQVEGFNFLVRNLVGDHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDLYTVKADSRSQQLEVLKQWMNNKSILFLGYKQFSSIVCDNSNNNASISCQEILLKVPSILILDEGHTPRNENTDMVQSLAKVQTPRKVVLSGTLYQNHVREVFNVLNLVRPKFLKMETSKPIVRRIQARVHIPSVKRFDDLVENTLQKDPDFKRKVAVIHDLREMTSKVLHYYKGDFLDELPGLVDFTVVLKLTPRQKIEVEKAKKMYIRKFKFSSVGSAVYLHPKLKAIAEKCDENSISDHIMDDFIADLDMRDGVKSKFFRNMLNLCESAGEKLLVFSQYLLPLKYLERLAMKWKGWSLGKEIFVISGESSAEQREFSMEKFNNSPEAKIFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLIAADSPEEEDHHTCFKKELISKMWFEWNEYCGDRAFEVETLDVKECGDLFLESPLLGEDVTCGHSNKLNSISNRDGIFEGVSEKTMLLADLFTSLPPEH*