AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0171250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171250 MtrunA17_Chr1g0189231 95.550 1101 23 4 3 1097 4 1084 0.0 2164
Msa0171250 MtrunA17_Chr6g0488541 57.837 1091 374 13 31 1066 69 1128 0.0 1286
Msa0171250 MtrunA17_Chr7g0263111 27.218 496 225 18 462 934 61 443 3.52e-39 152
Msa0171250 MtrunA17_Chr8g0375751 25.799 438 223 15 522 935 61 420 1.34e-31 129
Msa0171250 MtrunA17_Chr4g0054951 31.724 290 138 8 602 887 310 543 1.83e-30 128
Msa0171250 MtrunA17_Chr4g0054941 31.034 290 140 8 602 887 310 543 1.60e-29 125
Msa0171250 MtrunA17_Chr6g0479511 24.279 416 210 14 506 883 34 382 3.27e-29 121
Msa0171250 MtrunA17_Chr8g0382571 29.167 312 159 10 579 883 189 445 3.96e-29 122
Msa0171250 MtrunA17_Chr6g0452181 25.275 455 216 14 521 931 56 430 4.26e-29 122
Msa0171250 MtrunA17_Chr1g0154491 28.883 367 171 12 515 876 45 326 6.96e-29 119
Msa0171250 MtrunA17_Chr1g0201271 27.778 288 145 9 600 883 369 597 7.96e-29 123
Msa0171250 MtrunA17_Chr5g0400311 29.966 297 148 9 595 887 360 600 1.38e-28 122
Msa0171250 MtrunA17_Chr6g0466801 28.819 288 142 9 600 883 367 595 3.57e-28 121
Msa0171250 MtrunA17_Chr1g0165011 24.524 420 198 14 515 883 58 409 2.90e-27 116
Msa0171250 MtrunA17_Chr5g0394901 29.339 242 129 5 600 837 352 555 7.13e-26 114
Msa0171250 MtrunA17_Chr1g0205121 30.579 242 126 5 600 837 313 516 9.55e-26 113
Msa0171250 MtrunA17_Chr1g0185281 30.328 244 128 5 598 837 284 489 1.34e-25 112
Msa0171250 MtrunA17_Chr7g0260081 30.375 293 145 9 600 887 286 524 5.91e-25 110
Msa0171250 MtrunA17_Chr8g0355021 24.913 289 155 8 602 883 227 460 5.05e-19 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171250 AT1G65580.1 61.566 1111 368 13 15 1097 22 1101 0.0 1419
Msa0171250 AT2G43900.1 60.374 1017 361 8 58 1055 104 1097 0.0 1307
Msa0171250 AT2G43900.2 58.627 1049 360 9 58 1055 104 1129 0.0 1294
Msa0171250 AT1G05630.2 59.209 1037 377 9 67 1080 105 1118 0.0 1282
Msa0171250 AT1G05630.1 57.330 1071 377 10 67 1080 105 1152 0.0 1264
Msa0171250 AT2G31830.2 55.100 1049 423 9 71 1095 120 1144 0.0 1191
Msa0171250 AT2G31830.1 55.609 1034 411 9 71 1080 120 1129 0.0 1190
Msa0171250 AT1G65580.2 64.988 854 267 5 256 1097 2 835 0.0 1177
Msa0171250 AT1G05630.3 60.907 816 275 8 67 861 105 897 0.0 1036
Msa0171250 AT2G31830.3 57.726 809 298 8 71 859 120 904 0.0 952
Msa0171250 AT2G01900.3 27.273 418 202 14 516 900 61 409 1.19e-32 132
Msa0171250 AT2G01900.1 27.273 418 202 14 516 900 53 401 1.25e-32 132
Msa0171250 AT4G18010.1 32.215 298 142 11 594 887 381 622 1.78e-31 132
Msa0171250 AT3G63240.2 31.699 306 151 8 582 883 259 510 2.22e-30 127
Msa0171250 AT3G63240.1 31.699 306 151 8 582 883 259 510 2.22e-30 127
Msa0171250 AT1G71710.2 29.371 286 140 7 602 883 399 626 7.97e-30 127
Msa0171250 AT1G71710.1 29.371 286 140 7 602 883 408 635 9.24e-30 127
Msa0171250 AT2G01900.2 26.316 418 197 15 516 900 53 392 4.38e-28 118
Msa0171250 AT2G37440.1 26.651 424 190 18 520 894 82 433 3.67e-27 117
Msa0171250 AT2G37440.3 26.651 424 190 18 520 894 82 433 3.67e-27 117
Msa0171250 AT1G34120.5 26.667 285 153 6 601 883 181 411 6.63e-27 115
Msa0171250 AT4G18010.2 33.058 242 117 8 594 831 381 581 1.16e-26 117
Msa0171250 AT2G32010.2 29.758 289 144 9 600 883 324 558 2.29e-26 115
Msa0171250 AT2G32010.1 29.758 289 144 9 600 883 324 558 2.29e-26 115
Msa0171250 AT2G32010.4 29.758 289 144 9 600 883 324 558 2.29e-26 115
Msa0171250 AT2G32010.3 29.758 289 144 9 600 883 324 558 2.29e-26 115
Msa0171250 AT1G05470.2 27.397 292 155 7 605 892 352 590 2.62e-26 115
Msa0171250 AT1G05470.1 27.397 292 155 7 605 892 352 590 2.62e-26 115
Msa0171250 AT1G47510.4 30.047 213 107 4 665 877 93 263 3.58e-26 109
Msa0171250 AT1G34120.2 26.667 285 153 6 601 883 336 566 4.16e-26 115
Msa0171250 AT1G47510.1 26.912 353 167 11 527 876 60 324 4.20e-26 111
Msa0171250 AT1G34120.1 26.667 285 153 6 601 883 332 562 4.89e-26 115
Msa0171250 AT5G65090.2 29.066 289 144 10 601 883 198 431 6.64e-26 113
Msa0171250 AT5G65090.3 29.066 289 144 10 601 883 261 494 1.24e-25 113
Msa0171250 AT5G65090.1 29.066 289 144 10 601 883 261 494 1.24e-25 113
Msa0171250 AT5G04980.4 28.014 282 149 7 605 883 160 390 1.25e-25 111
Msa0171250 AT1G34120.3 27.018 285 151 7 601 883 336 565 1.60e-25 113
Msa0171250 AT5G04980.1 28.014 282 149 7 605 883 195 425 1.96e-25 111
Msa0171250 AT5G04980.3 28.014 282 149 7 605 883 195 425 1.96e-25 111
Msa0171250 AT5G04980.2 28.014 282 149 7 605 883 224 454 2.13e-25 111
Msa0171250 AT2G37440.2 25.721 416 201 16 523 894 1 352 2.63e-25 110
Msa0171250 AT1G47510.2 31.953 169 101 3 710 876 105 261 2.33e-17 84.0

Find 314 sgRNAs with CRISPR-Local

Find 719 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACTTATGGAATGCAAATT+TGG 0.128312 1_4:+55915138 Msa0171250:CDS
GTTGCTTCTAACAAATATTT+TGG 0.129585 1_4:+55921746 Msa0171250:three_prime_UTR
CCGCCTTTGGCGATGAATTC+AGG 0.183076 1_4:-55911339 None:intergenic
TATGGTAGATAGACATTTAC+AGG 0.212201 1_4:-55921631 None:intergenic
CCGACCTTGTTTCAAGTTCT+AGG 0.218359 1_4:+55914862 Msa0171250:CDS
GCCTTCAATGCAAGACTTTC+CGG 0.218429 1_4:+55914839 Msa0171250:CDS
CTGAACGTGGACTACGATTC+TGG 0.228110 1_4:+55911514 Msa0171250:CDS
CATCAGTTGAGAGGTTCTTT+TGG 0.255502 1_4:+55920067 Msa0171250:CDS
AAATAGTCACTCACCTTAAT+TGG 0.255905 1_4:-55921357 None:intergenic
TTTGTACTTATGATAGTTTC+AGG 0.256838 1_4:-55919914 None:intergenic
TTTGGTTGCTGAATGCAATT+TGG 0.264029 1_4:+55918334 Msa0171250:CDS
TCAATCACAATCACTTCTTA+TGG 0.266530 1_4:+55911786 Msa0171250:CDS
CGCTCACGTAATGCCATAAT+GGG 0.269882 1_4:+55914921 Msa0171250:CDS
ATTGAATTCAGAACTGAAAA+TGG 0.273393 1_4:-55911041 None:intergenic
GGTTCAACATTTAAACGAAT+TGG 0.286201 1_4:+55915929 Msa0171250:CDS
TGGACGTGCTATTGGAAATA+AGG 0.293258 1_4:+55916375 Msa0171250:CDS
CCAGGGAGCTGTTGCTTTGA+GGG 0.296075 1_4:+55917029 Msa0171250:intron
CTCAAGATTCCCTTACTTCA+TGG 0.304893 1_4:+55915441 Msa0171250:CDS
TTCTGCTGGGCAGTGGTGGC+TGG 0.316135 1_4:+55915880 Msa0171250:CDS
TTGCGACCGAGTCGCAATTA+TGG 0.320678 1_4:+55911484 Msa0171250:CDS
CGCCATTTCGTGAATCGGTT+TGG 0.324269 1_4:+55911610 Msa0171250:CDS
GGACTGGAGGGTAGTTCTGC+TGG 0.328570 1_4:+55915866 Msa0171250:CDS
AGCCCTTGAAGCACCAATTA+AGG 0.328669 1_4:+55921344 Msa0171250:exon
TGAGTTTGCGTTCGAGGAAT+TGG 0.337193 1_4:-55911293 None:intergenic
AGGTTAAATTGAGCTCCTTT+TGG 0.341931 1_4:-55921611 None:intergenic
TATCTCAAAGATGCTTTGAT+TGG 0.343370 1_4:+55917539 Msa0171250:CDS
GATTCCGGCACCGCCGCCTT+TGG 0.348253 1_4:-55911352 None:intergenic
TGCTGCTATGCTTTGCAAGC+TGG 0.348833 1_4:+55916414 Msa0171250:CDS
GCGCTCACGTAATGCCATAA+TGG 0.349932 1_4:+55914920 Msa0171250:CDS
GCGTTTCGATCTTTATCTAA+TGG 0.353181 1_4:+55911107 Msa0171250:exon
GATGTTGGCCTTGTTGTTGT+TGG 0.354509 1_4:+55915482 Msa0171250:CDS
TCGTGATAGTCGCTCTTCTT+TGG 0.354513 1_4:+55918316 Msa0171250:CDS
TTCCCTTTCAATTGTAGCTT+CGG 0.354787 1_4:-55921662 None:intergenic
TGTGGCTTTGGACGTGCTAT+TGG 0.356280 1_4:+55916367 Msa0171250:CDS
CAAAATTGCTTCCTTGTCTC+TGG 0.356746 1_4:-55921123 None:intergenic
CCCCTATCAGGTTACCCTTC+AGG 0.357341 1_4:-55915196 None:intergenic
ACCAGGGAGCTGTTGCTTTG+AGG 0.360681 1_4:+55917028 Msa0171250:intron
GCAGCAGTTCCATGTGGCTT+TGG 0.360733 1_4:+55916355 Msa0171250:CDS
GACTTCTCCGGCGATTTGTT+TGG 0.362096 1_4:+55911632 Msa0171250:CDS
ATTGGATCCAGGCAACTTGC+AGG 0.363077 1_4:+55915947 Msa0171250:CDS
GTAGCTTCGGCTGTTTAGTA+TGG 0.368059 1_4:-55921649 None:intergenic
AAGGCAAAGGTGTGGAGTGC+TGG 0.376191 1_4:+55912988 Msa0171250:CDS
TAACAATTGATGGAATGATT+TGG 0.380093 1_4:+55915021 Msa0171250:CDS
GTTGTATTTAAGAGGTTTGT+TGG 0.380263 1_4:-55917171 None:intergenic
GCAGACATGATTGTATTTCT+TGG 0.380609 1_4:+55917463 Msa0171250:CDS
CCAATACGGAGACAGGAGTT+TGG 0.381547 1_4:+55919833 Msa0171250:CDS
GGATCAGCTTCGAGCTGAAA+TGG 0.382975 1_4:+55917573 Msa0171250:CDS
GAAACGCGCGGAAAGAATAT+AGG 0.386912 1_4:-55911091 None:intergenic
CAAACATTAGACTTCATGTT+GGG 0.388130 1_4:+55916320 Msa0171250:CDS
TACTTATGGAATGCAAATTT+GGG 0.388626 1_4:+55915139 Msa0171250:CDS
GTAGGATTATGAGAATTCTA+AGG 0.389942 1_4:+55916520 Msa0171250:intron
ATCCAGGCAACTTGCAGGCT+TGG 0.392811 1_4:+55915952 Msa0171250:CDS
AGCCGTTTGCTTGAGTCAAT+TGG 0.394172 1_4:-55921229 None:intergenic
GAGAGGAGGTTTGAAGATTC+CGG 0.397056 1_4:-55911367 None:intergenic
CTAGCATCTCATTATTTGCT+TGG 0.399889 1_4:+55921782 Msa0171250:three_prime_UTR
TCACCTTAATTGGTGCTTCA+AGG 0.400676 1_4:-55921347 None:intergenic
GTTGCAGCAAAGGGAGCCTT+TGG 0.401006 1_4:+55914966 Msa0171250:CDS
GCACTTGTAGTAACAATTGA+TGG 0.403616 1_4:+55915011 Msa0171250:CDS
GTTGGTGGAATGAATAGAAT+TGG 0.404222 1_4:-55911250 None:intergenic
AAATGAAGGTCACATATTAT+AGG 0.404304 1_4:-55921841 None:intergenic
TACCAGGTGTTGTATTTAAG+AGG 0.404326 1_4:-55917179 None:intergenic
CCAAACTCCTGTCTCCGTAT+TGG 0.404332 1_4:-55919833 None:intergenic
AGGATATTCAAGTGGCTTGC+TGG 0.410437 1_4:+55915046 Msa0171250:CDS
AGATGGTGAGTTTGCGTTCG+AGG 0.413145 1_4:-55911299 None:intergenic
GACCTGAAGGGTAACCTGAT+AGG 0.415830 1_4:+55915194 Msa0171250:CDS
TGAACGACACCAAGCTGGTT+TGG 0.418007 1_4:+55917660 Msa0171250:CDS
GAGTGCGCCATTTCGTGAAT+CGG 0.418263 1_4:+55911605 Msa0171250:CDS
AGTCTGATCGATTCTCCATT+TGG 0.418680 1_4:-55914815 None:intergenic
CGACACCAAGCTGGTTTGGC+AGG 0.421696 1_4:+55917664 Msa0171250:CDS
CATTTAAACGAATTGGATCC+AGG 0.422554 1_4:+55915936 Msa0171250:CDS
GAAAGAACCCAATGGAACTT+TGG 0.422613 1_4:-55914896 None:intergenic
GTCCAAACCGATTCACGAAA+TGG 0.423973 1_4:-55911612 None:intergenic
GGTCTTATAATACCAGTTGC+AGG 0.424170 1_4:-55921005 None:intergenic
ATGTATATTGTATTAAATGA+AGG 0.425127 1_4:-55921855 None:intergenic
CGCCTTTGGCGATGAATTCA+GGG 0.428684 1_4:-55911338 None:intergenic
ATCGCCAAAGGCGGCGGTGC+CGG 0.430167 1_4:+55911348 Msa0171250:CDS
AAGATGAAGAAGCGTCGTTT+TGG 0.432240 1_4:-55911137 None:intergenic
CAGAACCTAGCCATGAAGTA+AGG 0.432253 1_4:-55915451 None:intergenic
CCCTTACGCGAGACTCAGAT+TGG 0.434966 1_4:+55911441 Msa0171250:CDS
TGTAGCCATTTGTAGATAGC+TGG 0.435365 1_4:-55912918 None:intergenic
TGGTTGCGGATGAAGGGAAT+AGG 0.437115 1_4:+55911652 Msa0171250:CDS
GACCAAGCCTGCAAGTTGCC+TGG 0.438966 1_4:-55915954 None:intergenic
GCTTTGATTGGCTTAGAGAA+AGG 0.443441 1_4:+55917551 Msa0171250:CDS
AAATGGAAAGAGCGAGCGTT+TGG 0.444094 1_4:-55911024 None:intergenic
ATTTGTTTGGTTGCGGATGA+AGG 0.446369 1_4:+55911645 Msa0171250:CDS
ATGTTGGCCTTGTTGTTGTT+GGG 0.447214 1_4:+55915483 Msa0171250:CDS
CTTCGAGCTGAAATGGAAGC+TGG 0.447564 1_4:+55917580 Msa0171250:CDS
CTTTGATTGGCTTAGAGAAA+GGG 0.447830 1_4:+55917552 Msa0171250:CDS
GAAGATTCGCTGTTGGCAAA+TGG 0.450946 1_4:+55911701 Msa0171250:CDS
GTCTGGCATTGTCCAGGTAT+TGG 0.451126 1_4:+55915172 Msa0171250:CDS
ACTCAGGAAGAGTTTGTTGA+TGG 0.451219 1_4:+55921071 Msa0171250:CDS
GCTTCTATTCCAATGTTTCG+TGG 0.453642 1_4:+55917311 Msa0171250:CDS
GACTGGAGGGTAGTTCTGCT+GGG 0.455784 1_4:+55915867 Msa0171250:CDS
TCGTGGTACGGCGGAGAAGC+AGG 0.457860 1_4:+55911558 Msa0171250:CDS
GACAGAAACCAAAGTTCCAT+TGG 0.458452 1_4:+55914888 Msa0171250:CDS
ACCTGAAGGGTAACCTGATA+GGG 0.459789 1_4:+55915195 Msa0171250:CDS
GGCTATGCAATTTATGCAGC+TGG 0.463431 1_4:-55921325 None:intergenic
TACACTTCCTTGGACGTGCC+TGG 0.464196 1_4:-55921252 None:intergenic
AAACGCGCGGAAAGAATATA+GGG 0.464302 1_4:-55911090 None:intergenic
GGTTCTGTGGCCTCAGATGT+TGG 0.464990 1_4:+55915467 Msa0171250:CDS
GTGATTGTGATTGAAAGAAC+AGG 0.470082 1_4:-55911777 None:intergenic
TGCAATACTGAAGAGACAAC+AGG 0.470288 1_4:-55918362 None:intergenic
TCCAATCTGAGTCTCGCGTA+AGG 0.471792 1_4:-55911442 None:intergenic
ATTTGGGTAGGTTATGTGTC+TGG 0.472737 1_4:+55915155 Msa0171250:CDS
GAGAGGGAGGTGGTCGGAGA+TGG 0.473158 1_4:-55911316 None:intergenic
GAGGTTTGTTGGTCGACTAA+AGG 0.473639 1_4:-55917160 None:intergenic
GATACCTCAATAATCTGATC+TGG 0.475261 1_4:-55921026 None:intergenic
TGGGTTGCAAGAGGTTGAAA+TGG 0.476153 1_4:+55915502 Msa0171250:CDS
GCCGGAAAGTCTTGCATTGA+AGG 0.477110 1_4:-55914840 None:intergenic
GTAGTTCTGCTGGGCAGTGG+TGG 0.477422 1_4:+55915876 Msa0171250:CDS
ATCGGTGAAGTACACTTCCT+TGG 0.480038 1_4:-55921262 None:intergenic
TTACTGCTTCACGCATTCCT+TGG 0.480387 1_4:-55917612 None:intergenic
AGGGTAGTTCTGCTGGGCAG+TGG 0.482882 1_4:+55915873 Msa0171250:CDS
TACGCAAAATTAATGTGTCC+TGG 0.486489 1_4:-55919955 None:intergenic
TGAAACGTCGTCGTTGTCGT+TGG 0.487718 1_4:-55911223 None:intergenic
GATCTATACGCGTCGTGGTA+CGG 0.488443 1_4:+55911546 Msa0171250:CDS
GATTCCCTTACTTCATGGCT+AGG 0.488496 1_4:+55915446 Msa0171250:CDS
AAGTGGCTTGCTGGTGCAAT+GGG 0.491693 1_4:+55915055 Msa0171250:CDS
CACCTTAATTGGTGCTTCAA+GGG 0.491787 1_4:-55921346 None:intergenic
TGATCTAGGGGATCTGTGGT+CGG 0.492661 1_4:+55912771 Msa0171250:intron
TATAGGAAGTCATTAACAAA+TGG 0.494459 1_4:-55921824 None:intergenic
CAAGAGGTTGAAATGGGCGC+TGG 0.495167 1_4:+55915509 Msa0171250:CDS
TTGAGTGGCACTTGGAATGT+TGG 0.495567 1_4:+55915404 Msa0171250:CDS
ACAGAAACCAAAGTTCCATT+GGG 0.496226 1_4:+55914889 Msa0171250:CDS
TGATACCATTTAATTCCAAA+AGG 0.496544 1_4:+55921596 Msa0171250:three_prime_UTR
TCCGGCGATTTGTTTGGTTG+CGG 0.497428 1_4:+55911638 Msa0171250:CDS
GAAAATCCAGTGGCATGTTA+CGG 0.497503 1_4:+55921682 Msa0171250:three_prime_UTR
GATCTAGGGGATCTGTGGTC+GGG 0.497803 1_4:+55912772 Msa0171250:intron
TACTTCATGGCTAGGTTCTG+TGG 0.497882 1_4:+55915454 Msa0171250:CDS
CTGTGGTCGGGTTCAGAAGG+AGG 0.499297 1_4:+55912784 Msa0171250:CDS
TACCCTTCAGGTCCAATACC+TGG 0.500021 1_4:-55915184 None:intergenic
AGGAGGACGGGAAGGATGTA+CGG 0.500575 1_4:-55911397 None:intergenic
TTTCAATTCAGATGGCCAAA+TGG 0.500882 1_4:+55914800 Msa0171250:CDS
TGAGTCTCGCGTAAGGGATG+AGG 0.501476 1_4:-55911435 None:intergenic
TGACTCAAGCAAACGGCTCC+AGG 0.501891 1_4:+55921234 Msa0171250:CDS
AGATGAACCAATACGGAGAC+AGG 0.503011 1_4:+55919826 Msa0171250:CDS
CGAAGGGCAGACTACTGTAC+TGG 0.503492 1_4:+55920024 Msa0171250:CDS
TGCTTCACGCATTCCTTGGA+AGG 0.504405 1_4:-55917608 None:intergenic
GTCGACTAAAGGACATTGTT+CGG 0.507124 1_4:-55917149 None:intergenic
TTATGTGTCTGGCATTGTCC+AGG 0.507537 1_4:+55915166 Msa0171250:CDS
AAAAGAAACGCATCCCTGCC+TGG 0.507732 1_4:+55918276 Msa0171250:CDS
CTCAAGCATATAGGTAGGAC+TGG 0.508609 1_4:+55915850 Msa0171250:intron
ATTGATGGAATGATTTGGAC+AGG 0.509230 1_4:+55915026 Msa0171250:CDS
ATTCAGGTAAGTCCTGCAAC+TGG 0.514095 1_4:+55920993 Msa0171250:intron
TGGATTGCCTAGGTGGCTTG+AGG 0.516378 1_4:+55920087 Msa0171250:CDS
GTGTCGTTCAAACTTGTATG+TGG 0.518152 1_4:-55917647 None:intergenic
TGAATCGGTTTGGACTTCTC+CGG 0.519564 1_4:+55911620 Msa0171250:CDS
GCTGCACATTTAGATGCAGT+TGG 0.519575 1_4:+55917096 Msa0171250:CDS
AGGCAAAGGTGTGGAGTGCT+GGG 0.521311 1_4:+55912989 Msa0171250:CDS
GCAATCGAGACGGCGGTTGG+TGG 0.521437 1_4:-55911265 None:intergenic
AGGAGCCAGCTATCTACAAA+TGG 0.521693 1_4:+55912913 Msa0171250:CDS
GAATTCATCGCCAAAGGCGG+CGG 0.522449 1_4:+55911342 Msa0171250:CDS
GTTCGCCGAGTTGCAGCAAA+GGG 0.522989 1_4:+55914957 Msa0171250:CDS
TGGAAATGGCAATCGCATAC+AGG 0.523350 1_4:+55915079 Msa0171250:CDS
TGTGGTCGGGTTCAGAAGGA+GGG 0.527175 1_4:+55912785 Msa0171250:CDS
GGATGGAACATCACCTCTCC+AGG 0.527747 1_4:+55915305 Msa0171250:CDS
GAGCCTTTGGAGATGAGAAT+CGG 0.527887 1_4:+55914979 Msa0171250:CDS
ATTGGTTTCCAGCCTGCAGA+AGG 0.529588 1_4:+55917421 Msa0171250:intron
CATGCAATCGAGACGGCGGT+TGG 0.529843 1_4:-55911268 None:intergenic
TAAAGATCTTGAGTGGCACT+TGG 0.530907 1_4:+55915396 Msa0171250:CDS
AAAATTCTGTCACACCAGGC+AGG 0.533000 1_4:-55918290 None:intergenic
CCAATCTGAGTCTCGCGTAA+GGG 0.533674 1_4:-55911441 None:intergenic
AACTCAGGTATCCCTTCTGC+AGG 0.534161 1_4:-55917433 None:intergenic
AACCAATTGACTCAAGCAAA+CGG 0.534186 1_4:+55921227 Msa0171250:CDS
AAGACCAGATCAGATTATTG+AGG 0.534380 1_4:+55921022 Msa0171250:CDS
CAAAAGAACCTCTCAACTGA+TGG 0.535254 1_4:-55920066 None:intergenic
TTTGTTTGGTTGCGGATGAA+GGG 0.535744 1_4:+55911646 Msa0171250:CDS
TGCAACTCGGCGAACAGCAT+CGG 0.536199 1_4:-55914949 None:intergenic
AGCCGAAGCTACAATTGAAA+GGG 0.536884 1_4:+55921660 Msa0171250:three_prime_UTR
TTCGAGCTGAAATGGAAGCT+GGG 0.537932 1_4:+55917581 Msa0171250:CDS
TTATGGTCTGCGACTGAACG+TGG 0.538492 1_4:+55911501 Msa0171250:CDS
GTGTGGAGTGGACATAGAGA+TGG 0.538655 1_4:+55911678 Msa0171250:CDS
ACATTTGTACCACGAAACAT+TGG 0.542372 1_4:-55917320 None:intergenic
CAGCCGAAGCTACAATTGAA+AGG 0.544158 1_4:+55921659 Msa0171250:three_prime_UTR
ACTTCATGTTGGGGATGTTG+AGG 0.544204 1_4:+55916330 Msa0171250:CDS
TATAAGAAAGTGCGTTGTTG+AGG 0.545101 1_4:-55911177 None:intergenic
CAAGTGGCTTGCTGGTGCAA+TGG 0.545187 1_4:+55915054 Msa0171250:CDS
AAAATGCTATCAAGAGGTCC+TGG 0.545545 1_4:-55915323 None:intergenic
GGGAATAGGTTGGTGTGGAG+TGG 0.545958 1_4:+55911666 Msa0171250:CDS
TACTGTACTGGAGGATCAGA+AGG 0.550107 1_4:+55920036 Msa0171250:CDS
ACAAACATTAGACTTCATGT+TGG 0.550962 1_4:+55916319 Msa0171250:CDS
ATGGTGTTGTACAAAACTCT+TGG 0.551451 1_4:+55921090 Msa0171250:CDS
CTCCCTGAATTCATCGCCAA+AGG 0.551588 1_4:+55911336 Msa0171250:CDS
TGAGGGTTAGAGTGTATGAT+CGG 0.553134 1_4:+55917046 Msa0171250:CDS
GATCTGTGGTCGGGTTCAGA+AGG 0.553223 1_4:+55912781 Msa0171250:CDS
ATCGGATAATTCAAAGGCAA+AGG 0.553375 1_4:+55912975 Msa0171250:CDS
AGCATATAGGTAGGACTGGA+GGG 0.554205 1_4:+55915854 Msa0171250:intron
GCCAACCTGCCAAACCAGCT+TGG 0.554240 1_4:-55917669 None:intergenic
TTGTGGTTGAACTTGAATCA+TGG 0.554273 1_4:+55921523 Msa0171250:three_prime_UTR
GGAAAGAATATAGGGAGGAT+TGG 0.554720 1_4:-55911082 None:intergenic
GAACTTGAAACAAGGTCGGC+CGG 0.555555 1_4:-55914858 None:intergenic
AACGGCTCCAGGCACGTCCA+AGG 0.559413 1_4:+55921245 Msa0171250:CDS
TGAATTCAGGGAGAGGGAGG+TGG 0.559758 1_4:-55911326 None:intergenic
TATGGAATGCAAATTTGGGT+AGG 0.560889 1_4:+55915143 Msa0171250:CDS
TGTCCAGGTATTGGACCTGA+AGG 0.561084 1_4:+55915181 Msa0171250:CDS
CGTGCTATTGGAAATAAGGT+AGG 0.562382 1_4:+55916379 Msa0171250:CDS
AATATTACCTCAAGCCACCT+AGG 0.562574 1_4:-55920094 None:intergenic
TGCGGATGAAGGGAATAGGT+TGG 0.563513 1_4:+55911656 Msa0171250:CDS
GGGTTGCAAGAGGTTGAAAT+GGG 0.564094 1_4:+55915503 Msa0171250:CDS
AAATTCTGTCACACCAGGCA+GGG 0.567856 1_4:-55918289 None:intergenic
GAAGCTGGGAATGCCTTCCA+AGG 0.568907 1_4:+55917595 Msa0171250:CDS
TCATGAGGAATTTCAGACTC+AGG 0.570956 1_4:+55921055 Msa0171250:CDS
CTTAGTATCGGATAATTCAA+AGG 0.572942 1_4:+55912969 Msa0171250:CDS
ACTATCTGTGACATCCATGC+AGG 0.573452 1_4:-55919756 None:intergenic
GGCTTGCTGGTGCAATGGGA+TGG 0.573848 1_4:+55915059 Msa0171250:CDS
TACGCGAGACTCAGATTGGA+CGG 0.573930 1_4:+55911445 Msa0171250:CDS
AGATGCAGCGCACAGGCTTG+TGG 0.573980 1_4:-55919781 None:intergenic
TTGTTCGAAATAATTTGCGA+AGG 0.574719 1_4:+55920007 Msa0171250:CDS
TAAAGGGCCACAAACGTCGT+CGG 0.575235 1_4:-55921919 None:intergenic
CAACTGCCGTAACATGCCAC+TGG 0.575675 1_4:-55921688 None:intergenic
TTCATCTGACAGAGGAGGAA+AGG 0.575700 1_4:+55912848 Msa0171250:CDS
TGTTCGCCGAGTTGCAGCAA+AGG 0.576318 1_4:+55914956 Msa0171250:CDS
CTCGAGTAGATGAACCAATA+CGG 0.576561 1_4:+55919819 Msa0171250:CDS
TAATTCGAGAGAAGGAGGAC+GGG 0.576986 1_4:-55911409 None:intergenic
AACCTCTTAAATACAACACC+TGG 0.578781 1_4:+55917177 Msa0171250:CDS
GTAGAAAAGATGCAGCGCAC+AGG 0.579203 1_4:-55919788 None:intergenic
ATGAAGGGAATAGGTTGGTG+TGG 0.579410 1_4:+55911661 Msa0171250:CDS
ATAGACAAAACACTGGATGA+AGG 0.579738 1_4:+55915908 Msa0171250:CDS
GGATGTACGGCGGCGCGGAG+AGG 0.580045 1_4:-55911384 None:intergenic
TCGAGAGAAGGAGGACGGGA+AGG 0.581232 1_4:-55911405 None:intergenic
CAATAGGTACGAAGCCTGCA+TGG 0.582129 1_4:+55919742 Msa0171250:intron
TGGCGATGAATTCAGGGAGA+GGG 0.582484 1_4:-55911332 None:intergenic
GGTGGAATGAATAGAATTGG+AGG 0.583925 1_4:-55911247 None:intergenic
CTGGTGCAATGGGATGGAAA+TGG 0.584105 1_4:+55915065 Msa0171250:CDS
CGCAGACCATAATTGCGACT+CGG 0.585355 1_4:-55911490 None:intergenic
GAACACAAAATGCTATCAAG+AGG 0.585696 1_4:-55915329 None:intergenic
TGTTGTTGTTGGGTTGCAAG+AGG 0.587409 1_4:+55915493 Msa0171250:CDS
AGAACCTAGCCATGAAGTAA+GGG 0.587761 1_4:-55915450 None:intergenic
AGATATAAAGTACTTAGTAT+CGG 0.588110 1_4:+55912957 Msa0171250:CDS
TGTACGGCGGCGCGGAGAGG+AGG 0.588332 1_4:-55911381 None:intergenic
TGAGGACGTAATTCGAGAGA+AGG 0.590208 1_4:-55911417 None:intergenic
GATTTGATCTAGGGGATCTG+TGG 0.591401 1_4:+55912767 Msa0171250:intron
TTCAGGGAGAGGGAGGTGGT+CGG 0.592018 1_4:-55911322 None:intergenic
AAGTTTGAACGACACCAAGC+TGG 0.593721 1_4:+55917655 Msa0171250:CDS
CGATGAATTCAGGGAGAGGG+AGG 0.594579 1_4:-55911329 None:intergenic
TCCGCAACCAAACAAATCGC+CGG 0.594593 1_4:-55911639 None:intergenic
ACCACGGTGGCATACGAGGA+TGG 0.594620 1_4:+55915288 Msa0171250:CDS
CTTTCCTAGAACTTGAAACA+AGG 0.597016 1_4:-55914866 None:intergenic
ATCTATTCATCTGACAGAGG+AGG 0.599412 1_4:+55912843 Msa0171250:CDS
TTTGAGCAATTCATTTGATG+TGG 0.599823 1_4:+55921298 Msa0171250:CDS
AGGCTCCCTTTGCTGCAACT+CGG 0.603078 1_4:-55914962 None:intergenic
CAACATAATTCTTCAAAACC+AGG 0.604281 1_4:+55919937 Msa0171250:CDS
TTGGCGATGAATTCAGGGAG+AGG 0.604449 1_4:-55911333 None:intergenic
CCTGAATTCATCGCCAAAGG+CGG 0.604862 1_4:+55911339 Msa0171250:CDS
ATGTCTGCCTCAGATAACTC+AGG 0.605077 1_4:-55917448 None:intergenic
CCTAGAACTTGAAACAAGGT+CGG 0.606149 1_4:-55914862 None:intergenic
GTCGTTGGAAGAAGAAGAGG+AGG 0.607545 1_4:-55911208 None:intergenic
GGGAAGGATGTACGGCGGCG+CGG 0.607719 1_4:-55911389 None:intergenic
ATTTGGACAGGATATTCAAG+TGG 0.608816 1_4:+55915038 Msa0171250:CDS
TGTTCGAAATAATTTGCGAA+GGG 0.608875 1_4:+55920008 Msa0171250:CDS
TCATGTTGGGGATGTTGAGG+CGG 0.609394 1_4:+55916333 Msa0171250:CDS
TCTCCGATTCTCATCTCCAA+AGG 0.609708 1_4:-55914982 None:intergenic
AAGCATATAGGTAGGACTGG+AGG 0.611789 1_4:+55915853 Msa0171250:intron
GAAAGTGCGTTGTTGAGGAG+TGG 0.612439 1_4:-55911172 None:intergenic
AGTTGGCTATGTATTCACAT+TGG 0.614806 1_4:+55915262 Msa0171250:CDS
AACATTGAACAGCAAATGGG+TGG 0.615120 1_4:-55915112 None:intergenic
GTTGTCGTTGGAAGAAGAAG+AGG 0.617786 1_4:-55911211 None:intergenic
GAAAACATAAAGATCTTGAG+TGG 0.619660 1_4:+55915389 Msa0171250:CDS
CCTGAAGGGTAACCTGATAG+GGG 0.619748 1_4:+55915196 Msa0171250:CDS
AGAGATCCTACGTTGACTTG+AGG 0.621762 1_4:+55912893 Msa0171250:CDS
AACAGTGGTGAACACGCACT+CGG 0.622597 1_4:-55921190 None:intergenic
TGTGGAGTGGACATAGAGAT+GGG 0.622977 1_4:+55911679 Msa0171250:CDS
GCTAACCACGGTGGCATACG+AGG 0.623769 1_4:+55915284 Msa0171250:CDS
CAGGCTTGGTCATTGCTGTG+TGG 0.625182 1_4:+55915966 Msa0171250:CDS
GGATATGATAGACAAAACAC+TGG 0.627351 1_4:+55915901 Msa0171250:CDS
CGTTCAAACTTGTATGTGGG+AGG 0.627825 1_4:-55917643 None:intergenic
GAGATGGGAAGATTCGCTGT+TGG 0.628133 1_4:+55911694 Msa0171250:CDS
GTAATTCGAGAGAAGGAGGA+CGG 0.628813 1_4:-55911410 None:intergenic
CTTGCAACCCAACAACAACA+AGG 0.629793 1_4:-55915490 None:intergenic
GTACAGAGAAAGCAAATGCA+AGG 0.630958 1_4:+55921559 Msa0171250:three_prime_UTR
TAAAATAAAGTGTGCCAGCG+TGG 0.631179 1_4:+55910979 None:intergenic
TGTCGTTCAAACTTGTATGT+GGG 0.634355 1_4:-55917646 None:intergenic
GGACGTAATTCGAGAGAAGG+AGG 0.635159 1_4:-55911414 None:intergenic
GACAGAGGAGGAAAGGCACA+AGG 0.636905 1_4:+55912855 Msa0171250:CDS
GTGTGAAGACTCCAGAGACA+AGG 0.636970 1_4:+55921112 Msa0171250:CDS
GCGGAGAAGCAGGTGTTGTG+AGG 0.638052 1_4:+55911568 Msa0171250:CDS
GGCACTTGGAATGTTGGACA+AGG 0.645154 1_4:+55915410 Msa0171250:CDS
AACAACAAGGCCAACATCTG+AGG 0.646340 1_4:-55915477 None:intergenic
TTAAAGATCTATACGCGTCG+TGG 0.648392 1_4:+55911541 Msa0171250:CDS
AAACATTAGACTTCATGTTG+GGG 0.649582 1_4:+55916321 Msa0171250:CDS
GTCCAGGTATTGGACCTGAA+GGG 0.651295 1_4:+55915182 Msa0171250:CDS
GCAACAAACCATCAGTTGAG+AGG 0.652514 1_4:+55920058 Msa0171250:CDS
GCTCACGTAATGCCATAATG+GGG 0.653820 1_4:+55914922 Msa0171250:CDS
GAAGCAGGTGTTGTGAGGAG+TGG 0.655079 1_4:+55911573 Msa0171250:CDS
ATAATTCAAAGGCAAAGGTG+TGG 0.656062 1_4:+55912980 Msa0171250:CDS
TATGTTGTGACGAACCACGC+TGG 0.656228 1_4:-55910993 None:intergenic
TGTTGAGGAGTGGACGACAG+TGG 0.656845 1_4:-55911162 None:intergenic
GAGGCGGCAGCAGTTCCATG+TGG 0.658265 1_4:+55916349 Msa0171250:CDS
AGGGCAGACTACTGTACTGG+AGG 0.659691 1_4:+55920027 Msa0171250:CDS
ATAGCACGTCCAAAGCCACA+TGG 0.663632 1_4:-55916364 None:intergenic
TGAGGTATCAGTGCATCATG+AGG 0.665545 1_4:+55921040 Msa0171250:CDS
ATACAAAATTCTGTCACACC+AGG 0.668595 1_4:-55918294 None:intergenic
TTGGTTTCCAGCCTGCAGAA+GGG 0.670134 1_4:+55917422 Msa0171250:intron
AGGGATACCTGAGTTATCTG+AGG 0.671277 1_4:+55917441 Msa0171250:CDS
AATTGAAAGGGAAAATCCAG+TGG 0.673658 1_4:+55921672 Msa0171250:three_prime_UTR
AAAATCTATTCATCTGACAG+AGG 0.675320 1_4:+55912840 Msa0171250:CDS
GTATTCACATTGGCTAACCA+CGG 0.676920 1_4:+55915272 Msa0171250:CDS
CTCACGTAATGCCATAATGG+GGG 0.677397 1_4:+55914923 Msa0171250:CDS
GCTATCAAGAGGTCCTGGAG+AGG 0.678266 1_4:-55915318 None:intergenic
TCAAACGTTGAAAATCAGAT+CGG 0.678275 1_4:-55921280 None:intergenic
ATTGGAGCATGCAATCGAGA+CGG 0.679008 1_4:-55911275 None:intergenic
CTGGCTCCTCAAGTCAACGT+AGG 0.684792 1_4:-55912899 None:intergenic
GTGGTCGGGTTCAGAAGGAG+GGG 0.685407 1_4:+55912786 Msa0171250:CDS
TCCATCCTCGTATGCCACCG+TGG 0.685454 1_4:-55915289 None:intergenic
TGAGCGCTGAAAGAACCCAA+TGG 0.689656 1_4:-55914904 None:intergenic
GCAATACTGAAGAGACAACA+GGG 0.696256 1_4:-55918361 None:intergenic
GGAGCATGCAATCGAGACGG+CGG 0.701657 1_4:-55911272 None:intergenic
CGCGCGGAAAGAATATAGGG+AGG 0.702512 1_4:-55911087 None:intergenic
CTGAAGGGTAACCTGATAGG+GGG 0.706991 1_4:+55915197 Msa0171250:CDS
TAGATAAAGATCGAAACGCG+CGG 0.713864 1_4:-55911103 None:intergenic
TTATCTTGGCAAGCTCATCG+TGG 0.716369 1_4:+55911753 Msa0171250:CDS
TTCACATTGGCTAACCACGG+TGG 0.730525 1_4:+55915275 Msa0171250:CDS
CTATACGCGTCGTGGTACGG+CGG 0.730697 1_4:+55911549 Msa0171250:CDS
AGGACGGGAAGGATGTACGG+CGG 0.758417 1_4:-55911394 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATAATTTATAAATTTTT+AGG - chr1_4:55914237-55914256 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAATATT+GGG - chr1_4:55916903-55916922 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAATAT+TGG - chr1_4:55916904-55916923 None:intergenic 0.0%
!! AAAATGAATAAAATTCAAAT+AGG + chr1_4:55913393-55913412 Msa0171250:intron 10.0%
!! AAATGAATAAAATTCAAATA+GGG + chr1_4:55913394-55913413 Msa0171250:intron 10.0%
!! ATTTAATAATGTGAAAAAAT+AGG - chr1_4:55913647-55913666 None:intergenic 10.0%
!! GTTATAGTATAAATATATAT+TGG + chr1_4:55916061-55916080 Msa0171250:intron 10.0%
!!! AATTTAATTTTTCATTCTTT+TGG + chr1_4:55918065-55918084 Msa0171250:intron 10.0%
!!! ATTTAATTTTTCATTCTTTT+GGG + chr1_4:55918066-55918085 Msa0171250:intron 10.0%
!!! ACTATTTTGTTTTATTATTT+TGG + chr1_4:55921373-55921392 Msa0171250:intron 10.0%
!!! TAAAAGATTTTACATTTAAA+GGG - chr1_4:55921938-55921957 None:intergenic 10.0%
!!! ATTTTAACGAAAAATTATCT+TGG + chr1_4:55911739-55911758 Msa0171250:CDS 15.0%
!! TAATATATGAATGTTAGTAT+GGG + chr1_4:55913070-55913089 Msa0171250:intron 15.0%
!!! ATATTTAGACTATTTTTGTT+AGG + chr1_4:55913165-55913184 Msa0171250:intron 15.0%
!!! TATTTAGACTATTTTTGTTA+GGG + chr1_4:55913166-55913185 Msa0171250:intron 15.0%
!! TTAATAAAATCTCTCATTTA+TGG - chr1_4:55914138-55914157 None:intergenic 15.0%
!! GCAATCTAAAAAATAATAAT+AGG + chr1_4:55914320-55914339 Msa0171250:intron 15.0%
!! ATGTATAAAGATATCATAAA+TGG + chr1_4:55914615-55914634 Msa0171250:intron 15.0%
!! AAAAATACACTTAAATGATT+AGG - chr1_4:55914707-55914726 None:intergenic 15.0%
!!! CTATAATATCAAATGATTTT+AGG - chr1_4:55916661-55916680 None:intergenic 15.0%
!! AATAGAAAAACATATTTACA+AGG + chr1_4:55916713-55916732 Msa0171250:intron 15.0%
!!! AAAACAATATTTTATTCAAG+AGG + chr1_4:55916943-55916962 Msa0171250:intron 15.0%
!!! TTTTTGATGATATAGTTTAA+AGG - chr1_4:55917874-55917893 None:intergenic 15.0%
!! ACGTATAATTATAAATTGAA+TGG + chr1_4:55918115-55918134 Msa0171250:intron 15.0%
!!! TATGAAATGTTTATTTTGAA+GGG + chr1_4:55918240-55918259 Msa0171250:intron 15.0%
!! TTTATATGTTTATTGCATTT+GGG + chr1_4:55918398-55918417 Msa0171250:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr1_4:55919284-55919303 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr1_4:55919283-55919302 None:intergenic 15.0%
!!! AATTTTGCAATAATTTTTTG+CGG - chr1_4:55919027-55919046 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - chr1_4:55919062-55919081 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + chr1_4:55919193-55919212 Msa0171250:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr1_4:55919283-55919302 Msa0171250:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr1_4:55919284-55919303 Msa0171250:intron 15.0%
!! TAACCCTAAAATATATAATA+TGG + chr1_4:55919352-55919371 Msa0171250:intron 15.0%
!!! AATGATTTTACATTACAAAT+AGG + chr1_4:55919531-55919550 Msa0171250:intron 15.0%
!!! ATGATTTTACATTACAAATA+GGG + chr1_4:55919532-55919551 Msa0171250:intron 15.0%
!! CAAAAATTTAAAGAAAAAGA+TGG - chr1_4:55919696-55919715 None:intergenic 15.0%
!! TAATTATTTATGATTACAGA+AGG + chr1_4:55920147-55920166 Msa0171250:intron 15.0%
!! TGCTAAAAAATTATACATTA+TGG + chr1_4:55920338-55920357 Msa0171250:intron 15.0%
!!! ATTTTGTTTTATTATTTTGG+TGG + chr1_4:55921376-55921395 Msa0171250:intron 15.0%
!!! TTTTTTTCTTTTCTTTTCAT+AGG + chr1_4:55921496-55921515 Msa0171250:intron 15.0%
!!! TTTTTTCTTTTCTTTTCATA+GGG + chr1_4:55921497-55921516 Msa0171250:intron 15.0%
!! ATGTATATTGTATTAAATGA+AGG - chr1_4:55921858-55921877 None:intergenic 15.0%
!! TAAATAATATAAAAAGACCA+TGG + chr1_4:55921877-55921896 Msa0171250:three_prime_UTR 15.0%
!!! TTTTTTTTACTAATAATCCA+TGG - chr1_4:55921897-55921916 None:intergenic 15.0%
!!! CTAAAAGATTTTACATTTAA+AGG - chr1_4:55921939-55921958 None:intergenic 15.0%
!!! TTAAATGTAAAATCTTTTAG+TGG + chr1_4:55921939-55921958 Msa0171250:three_prime_UTR 15.0%
!!! ATTTTTTAGATAAGCAACTT+TGG + chr1_4:55912193-55912212 Msa0171250:intron 20.0%
!! TAAGTTGTTTATTATAACAG+AGG - chr1_4:55912247-55912266 None:intergenic 20.0%
!!! TAAGTTTTGTGAGATTATTT+GGG - chr1_4:55912450-55912469 None:intergenic 20.0%
!!! ATAAGTTTTGTGAGATTATT+TGG - chr1_4:55912451-55912470 None:intergenic 20.0%
!! GTAAAAAAACCATAAACTTA+TGG - chr1_4:55912511-55912530 None:intergenic 20.0%
!!! GTTTTTTTACTTACAAACAT+AGG + chr1_4:55912521-55912540 Msa0171250:intron 20.0%
!! TATAAGCTTATAGATGTTTA+TGG + chr1_4:55912548-55912567 Msa0171250:intron 20.0%
!!! TTTTTTCTTGATTTGATCTA+GGG + chr1_4:55912758-55912777 Msa0171250:intron 20.0%
!!! AGATATAAAGTACTTAGTAT+CGG + chr1_4:55912957-55912976 Msa0171250:CDS 20.0%
!! GTAATATATGAATGTTAGTA+TGG + chr1_4:55913069-55913088 Msa0171250:intron 20.0%
!! TAAGTCAAGTGATAAAAAAT+AGG + chr1_4:55913588-55913607 Msa0171250:intron 20.0%
!! TAAAAAATAGGAAAGAACTT+AGG + chr1_4:55913600-55913619 Msa0171250:intron 20.0%
!!! AAGCTAAATAGTTTGTAATT+TGG + chr1_4:55913797-55913816 Msa0171250:intron 20.0%
!!! AAATTTAAAACTTCAGTTCA+AGG + chr1_4:55913846-55913865 Msa0171250:intron 20.0%
!!! TCTGAAATGAAATTTTCTTT+TGG + chr1_4:55913991-55914010 Msa0171250:intron 20.0%
!! TTAATCAACAAGCATAAAAA+TGG - chr1_4:55914022-55914041 None:intergenic 20.0%
!! TATTAATCCAACTATTGAAT+TGG + chr1_4:55914152-55914171 Msa0171250:intron 20.0%
!! GGTTATATATATTCAATGAT+TGG + chr1_4:55914284-55914303 Msa0171250:intron 20.0%
!! TATACTATATCCATACATAT+TGG - chr1_4:55914376-55914395 None:intergenic 20.0%
!!! TATATATTGGTTTTTGAAGT+TGG + chr1_4:55916074-55916093 Msa0171250:intron 20.0%
!!! TGTTGTTGTAAATTCTATTT+TGG + chr1_4:55916137-55916156 Msa0171250:intron 20.0%
!! TCTTTAATAGTAGATATGTT+AGG + chr1_4:55916473-55916492 Msa0171250:intron 20.0%
!! AAAAAAAAAAAATATTGGGG+TGG - chr1_4:55916899-55916918 None:intergenic 20.0%
!!! TTTTACAGAATTTGCTTTTA+AGG + chr1_4:55916920-55916939 Msa0171250:intron 20.0%
!! ATTACTTGAAAAGAATAAAG+TGG - chr1_4:55917359-55917378 None:intergenic 20.0%
!!! AATATAAACAGCATTTTTTG+TGG - chr1_4:55918160-55918179 None:intergenic 20.0%
!!! GTATGAAATGTTTATTTTGA+AGG + chr1_4:55918239-55918258 Msa0171250:intron 20.0%
!! GTTTATATGTTTATTGCATT+TGG + chr1_4:55918397-55918416 Msa0171250:intron 20.0%
!! AAATTTGCCTTATCAATAAA+GGG - chr1_4:55918515-55918534 None:intergenic 20.0%
!! TAAATTTGCCTTATCAATAA+AGG - chr1_4:55918516-55918535 None:intergenic 20.0%
!!! TTTTATTGTGGGTAAAATAT+AGG + chr1_4:55918794-55918813 Msa0171250:intron 20.0%
!! TTTATTGTGGGTAAAATATA+GGG + chr1_4:55918795-55918814 Msa0171250:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr1_4:55918931-55918950 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr1_4:55918932-55918951 None:intergenic 20.0%
!!! GGACCATATTATATATTTTA+GGG - chr1_4:55919358-55919377 None:intergenic 20.0%
!! AAGATTGTGAACAAATATAT+CGG + chr1_4:55920519-55920538 Msa0171250:intron 20.0%
!!! AACTTGTTTTTCTTTAGAAA+AGG + chr1_4:55920924-55920943 Msa0171250:intron 20.0%
! ATTGAATTCAGAACTGAAAA+TGG - chr1_4:55911044-55911063 None:intergenic 25.0%
! GAAAAGAAACAAATCAACAT+TGG - chr1_4:55912173-55912192 None:intergenic 25.0%
! CTTATTTGAGCTTATCTATT+GGG - chr1_4:55912474-55912493 None:intergenic 25.0%
!! TTTTAGCAAAATTGAGATGA+AGG + chr1_4:55912589-55912608 Msa0171250:intron 25.0%
!!! GTTTTTTCTTGATTTGATCT+AGG + chr1_4:55912757-55912776 Msa0171250:intron 25.0%
!!! TTTTTCTTGATTTGATCTAG+GGG + chr1_4:55912759-55912778 Msa0171250:intron 25.0%
!! GGTATTTTTCATATGCTTTA+TGG + chr1_4:55913010-55913029 Msa0171250:CDS 25.0%
!! TCATAATTTTTCATATCCTG+TGG + chr1_4:55913133-55913152 Msa0171250:intron 25.0%
! ACTTGATAAGAAGTTTAAAG+TGG + chr1_4:55913214-55913233 Msa0171250:intron 25.0%
!!! TTAAAGTGGAAGTTTTATCT+TGG + chr1_4:55913228-55913247 Msa0171250:intron 25.0%
!!! TAAAGTGGAAGTTTTATCTT+GGG + chr1_4:55913229-55913248 Msa0171250:intron 25.0%
! CTTGTTAAGGATTCAAAAAA+AGG - chr1_4:55913322-55913341 None:intergenic 25.0%
! GTTTCTACACTTAACAAAAA+GGG - chr1_4:55913371-55913390 None:intergenic 25.0%
! AGTTTCTACACTTAACAAAA+AGG - chr1_4:55913372-55913391 None:intergenic 25.0%
!!! TTACACAAATGGTTCTATTT+TGG + chr1_4:55913494-55913513 Msa0171250:intron 25.0%
!!! TACACAAATGGTTCTATTTT+GGG + chr1_4:55913495-55913514 Msa0171250:intron 25.0%
!! ACAGTTTTACCCATAAAATT+AGG - chr1_4:55913705-55913724 None:intergenic 25.0%
!! AAACTGTTTGTGTATTTTGT+AGG + chr1_4:55913718-55913737 Msa0171250:intron 25.0%
! TATCTTAGAGCTTATTCTTT+AGG - chr1_4:55913777-55913796 None:intergenic 25.0%
! TCATTTCAGATACTAGATTA+AGG - chr1_4:55913981-55914000 None:intergenic 25.0%
! TACTTATATCTTGTAGATCA+GGG - chr1_4:55914195-55914214 None:intergenic 25.0%
! ATTATACTATGTGAACATAG+AGG + chr1_4:55914263-55914282 Msa0171250:intron 25.0%
! TTGTGTCTAATATTTAGACT+TGG + chr1_4:55914348-55914367 Msa0171250:intron 25.0%
! TTTATACATCTCATGTCATA+GGG - chr1_4:55914604-55914623 None:intergenic 25.0%
!!! AAGATATCATAAATGGATTG+AGG + chr1_4:55914622-55914641 Msa0171250:intron 25.0%
!! TTGAAAGTTTTCAATTCAGA+TGG + chr1_4:55914792-55914811 Msa0171250:CDS 25.0%
! TAACAATTGATGGAATGATT+TGG + chr1_4:55915021-55915040 Msa0171250:CDS 25.0%
! AAAAACATTGAACAGCAAAT+GGG - chr1_4:55915118-55915137 None:intergenic 25.0%
!!! GTTCAATGTTTTTGTACTTA+TGG + chr1_4:55915125-55915144 Msa0171250:CDS 25.0%
! TACTTATGGAATGCAAATTT+GGG + chr1_4:55915139-55915158 Msa0171250:CDS 25.0%
! AAGGTAGGTTAATATTATCA+TGG + chr1_4:55916539-55916558 Msa0171250:intron 25.0%
! TAAATAAATACACTGTGTAG+TGG - chr1_4:55916585-55916604 None:intergenic 25.0%
! TAGTATGTTTGTTCATTTAC+CGG + chr1_4:55916799-55916818 Msa0171250:intron 25.0%
! ACAATCAATTTCCATATCAA+TGG - chr1_4:55917005-55917024 None:intergenic 25.0%
! TCAAGATAAATACATGGATA+AGG - chr1_4:55917237-55917256 None:intergenic 25.0%
!!! AGTTTAAAGGTGTTAGTATT+TGG - chr1_4:55917861-55917880 None:intergenic 25.0%
! ATATCAATTGCTGAAATTGT+AGG + chr1_4:55917993-55918012 Msa0171250:intron 25.0%
! TATCAATTGCTGAAATTGTA+GGG + chr1_4:55917994-55918013 Msa0171250:intron 25.0%
!!! CATTTTTTGTGGCTTAAAAA+TGG - chr1_4:55918149-55918168 None:intergenic 25.0%
! GTATTAAGTCTCATTATACT+TGG + chr1_4:55918459-55918478 Msa0171250:intron 25.0%
! AATTTGCCTTATCAATAAAG+GGG - chr1_4:55918514-55918533 None:intergenic 25.0%
!! TTTTACCCACAATAAAAGTA+CGG - chr1_4:55918791-55918810 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - chr1_4:55918898-55918917 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + chr1_4:55919221-55919240 Msa0171250:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + chr1_4:55919222-55919241 Msa0171250:intron 25.0%
!! GGGACCATATTATATATTTT+AGG - chr1_4:55919359-55919378 None:intergenic 25.0%
!!! AGACACATGTTTTTTGTATA+GGG - chr1_4:55919409-55919428 None:intergenic 25.0%
!!! AAGACACATGTTTTTTGTAT+AGG - chr1_4:55919410-55919429 None:intergenic 25.0%
! ATAAGACACTCAATTTCAAT+TGG - chr1_4:55919590-55919609 None:intergenic 25.0%
! TATATCATCTTACCTTCAAT+AGG + chr1_4:55919726-55919745 Msa0171250:intron 25.0%
! TTTGTACTTATGATAGTTTC+AGG - chr1_4:55919917-55919936 None:intergenic 25.0%
! AGATTGTGAACAAATATATC+GGG + chr1_4:55920520-55920539 Msa0171250:intron 25.0%
!! GAAGTTTCATATTGTAGTTT+TGG + chr1_4:55920680-55920699 Msa0171250:intron 25.0%
! TGTATACTAAATCCAATTGT+TGG - chr1_4:55920865-55920884 None:intergenic 25.0%
! GTATTCATACACTCAAAATT+CGG - chr1_4:55920902-55920921 None:intergenic 25.0%
!!! TTGTTTTATTATTTTGGTGG+AGG + chr1_4:55921379-55921398 Msa0171250:intron 25.0%
! TGATACCATTTAATTCCAAA+AGG + chr1_4:55921596-55921615 Msa0171250:three_prime_UTR 25.0%
!! TAAGTTTGTCTTTTAGATGA+TGG + chr1_4:55921724-55921743 Msa0171250:three_prime_UTR 25.0%
!! GTTGCTTCTAACAAATATTT+TGG + chr1_4:55921746-55921765 Msa0171250:three_prime_UTR 25.0%
! TATAGGAAGTCATTAACAAA+TGG - chr1_4:55921827-55921846 None:intergenic 25.0%
! AAATGAAGGTCACATATTAT+AGG - chr1_4:55921844-55921863 None:intergenic 25.0%
TCAATCACAATCACTTCTTA+TGG + chr1_4:55911786-55911805 Msa0171250:CDS 30.0%
TGTGTGACAATTAAACTCTA+AGG - chr1_4:55911856-55911875 None:intergenic 30.0%
ACACTGTCAATCAATCATAT+TGG - chr1_4:55911983-55912002 None:intergenic 30.0%
CAGTGTAAAACTGTTTATAC+TGG + chr1_4:55911997-55912016 Msa0171250:intron 30.0%
! AGTCTTTAGGAATAGTCTTT+AGG + chr1_4:55912109-55912128 Msa0171250:intron 30.0%
! GTCTTTAGGAATAGTCTTTA+GGG + chr1_4:55912110-55912129 Msa0171250:intron 30.0%
GCTTATTTGAGCTTATCTAT+TGG - chr1_4:55912475-55912494 None:intergenic 30.0%
AAGCTTATAGATGTTTATGG+AGG + chr1_4:55912551-55912570 Msa0171250:intron 30.0%
AGGAGATAATTTCAACTCAT+TGG + chr1_4:55912609-55912628 Msa0171250:intron 30.0%
AAGGAGGGGTTATAAAAATA+TGG + chr1_4:55912800-55912819 Msa0171250:CDS 30.0%
GGTTATAAAAATATGGCCTT+GGG + chr1_4:55912807-55912826 Msa0171250:CDS 30.0%
AAAATCTATTCATCTGACAG+AGG + chr1_4:55912840-55912859 Msa0171250:CDS 30.0%
! CTTAGTATCGGATAATTCAA+AGG + chr1_4:55912969-55912988 Msa0171250:CDS 30.0%
TATATTACTACCACTAAGAG+AGG - chr1_4:55913057-55913076 None:intergenic 30.0%
TAGAAGTCAACAATGTTCAA+AGG + chr1_4:55913523-55913542 Msa0171250:intron 30.0%
CAATTCTTGACTTAGTAAAC+CGG + chr1_4:55913562-55913581 Msa0171250:intron 30.0%
AATTCTTGACTTAGTAAACC+GGG + chr1_4:55913563-55913582 Msa0171250:intron 30.0%
! ACTGCTTCATCCTAATTTTA+TGG + chr1_4:55913692-55913711 Msa0171250:intron 30.0%
! CTGCTTCATCCTAATTTTAT+GGG + chr1_4:55913693-55913712 Msa0171250:intron 30.0%
TATGAAAGTTAGTGACATCA+AGG - chr1_4:55913824-55913843 None:intergenic 30.0%
TAATCCAACTATTGAATTGG+AGG + chr1_4:55914155-55914174 Msa0171250:intron 30.0%
AAAACCTCCAATTCAATAGT+TGG - chr1_4:55914162-55914181 None:intergenic 30.0%
GTACTTATATCTTGTAGATC+AGG - chr1_4:55914196-55914215 None:intergenic 30.0%
! TGTCACATTAGTTATTTCCT+AGG + chr1_4:55914400-55914419 Msa0171250:intron 30.0%
! GTCACATTAGTTATTTCCTA+GGG + chr1_4:55914401-55914420 Msa0171250:intron 30.0%
TTACCTAGTTGTTCTTTCAT+GGG - chr1_4:55914490-55914509 None:intergenic 30.0%
! GAATGCATTACATTTTTACG+CGG + chr1_4:55914519-55914538 Msa0171250:intron 30.0%
TTATACATCTCATGTCATAG+GGG - chr1_4:55914603-55914622 None:intergenic 30.0%
CTTTATACATCTCATGTCAT+AGG - chr1_4:55914605-55914624 None:intergenic 30.0%
CTAAGGATCAAATAACAATG+AGG - chr1_4:55914648-55914667 None:intergenic 30.0%
ATGTAGACAAAGAGAAACTA+AGG - chr1_4:55914665-55914684 None:intergenic 30.0%
CTAGCTTATATCAAATTGAC+AGG - chr1_4:55914733-55914752 None:intergenic 30.0%
CAAAAACATTGAACAGCAAA+TGG - chr1_4:55915119-55915138 None:intergenic 30.0%
GTACTTATGGAATGCAAATT+TGG + chr1_4:55915138-55915157 Msa0171250:CDS 30.0%
! TAGCATTTTGTGTTCAGAAT+TGG + chr1_4:55915337-55915356 Msa0171250:CDS 30.0%
! AGCATTTTGTGTTCAGAATT+GGG + chr1_4:55915338-55915357 Msa0171250:CDS 30.0%
GAAAACATAAAGATCTTGAG+TGG + chr1_4:55915389-55915408 Msa0171250:CDS 30.0%
TTTGACCATGCAAAAATTCA+TGG + chr1_4:55915693-55915712 Msa0171250:intron 30.0%
GTTATACTGTGTATGTATGT+GGG - chr1_4:55915779-55915798 None:intergenic 30.0%
AGTTATACTGTGTATGTATG+TGG - chr1_4:55915780-55915799 None:intergenic 30.0%
TGTTATGAACAAGAAAGGTT+AGG - chr1_4:55915811-55915830 None:intergenic 30.0%
GGTTCAACATTTAAACGAAT+TGG + chr1_4:55915929-55915948 Msa0171250:CDS 30.0%
!!! TATTGGTTTTTGAAGTTGGT+TGG + chr1_4:55916078-55916097 Msa0171250:intron 30.0%
!!! ATTGGTTTTTGAAGTTGGTT+GGG + chr1_4:55916079-55916098 Msa0171250:intron 30.0%
GAATTTACAACAACAAAAGC+AGG - chr1_4:55916132-55916151 None:intergenic 30.0%
ATATACGTTCAAACTGAATG+AGG - chr1_4:55916235-55916254 None:intergenic 30.0%
ACAAACATTAGACTTCATGT+TGG + chr1_4:55916319-55916338 Msa0171250:CDS 30.0%
CAAACATTAGACTTCATGTT+GGG + chr1_4:55916320-55916339 Msa0171250:CDS 30.0%
AAACATTAGACTTCATGTTG+GGG + chr1_4:55916321-55916340 Msa0171250:CDS 30.0%
! TTTCTTGTGTTTCTACATCT+TGG + chr1_4:55916447-55916466 Msa0171250:intron 30.0%
AATCCTACAAGAAAAACTGT+CGG - chr1_4:55916508-55916527 None:intergenic 30.0%
GTAGGATTATGAGAATTCTA+AGG + chr1_4:55916520-55916539 Msa0171250:intron 30.0%
!! GATTATGAGAATTCTAAGGT+AGG + chr1_4:55916524-55916543 Msa0171250:intron 30.0%
!! TCAAATGATTTTAGGTGTAG+TGG - chr1_4:55916653-55916672 None:intergenic 30.0%
AAATAATGAGTTAACCAGAC+TGG + chr1_4:55916851-55916870 Msa0171250:intron 30.0%
CAATTTCCATATCAATGGTT+AGG - chr1_4:55917000-55917019 None:intergenic 30.0%
GTTGTATTTAAGAGGTTTGT+TGG - chr1_4:55917174-55917193 None:intergenic 30.0%
AACAGGTCAAGATAAATACA+TGG - chr1_4:55917243-55917262 None:intergenic 30.0%
TATCTCAAAGATGCTTTGAT+TGG + chr1_4:55917539-55917558 Msa0171250:CDS 30.0%
AAAATCATTATTACGAGGTG+AGG - chr1_4:55917949-55917968 None:intergenic 30.0%
CAGTGAAAATCATTATTACG+AGG - chr1_4:55917954-55917973 None:intergenic 30.0%
GTTTATTGCATTTGGGTATA+CGG + chr1_4:55918405-55918424 Msa0171250:intron 30.0%
ACACACATATGCATAAAAGA+GGG + chr1_4:55918562-55918581 Msa0171250:intron 30.0%
! AACATTTTGCTAGAACAAGT+TGG + chr1_4:55918740-55918759 Msa0171250:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr1_4:55919315-55919334 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr1_4:55919314-55919333 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG - chr1_4:55918899-55918918 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG - chr1_4:55919159-55919178 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr1_4:55919314-55919333 Msa0171250:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr1_4:55919315-55919334 Msa0171250:intron 30.0%
!! TGAAGAAAGTGTCACATATA+GGG - chr1_4:55919379-55919398 None:intergenic 30.0%
TAATGCTACACAATCAGTAA+AGG - chr1_4:55919636-55919655 None:intergenic 30.0%
CAACATAATTCTTCAAAACC+AGG + chr1_4:55919937-55919956 Msa0171250:CDS 30.0%
! TTGTTCGAAATAATTTGCGA+AGG + chr1_4:55920007-55920026 Msa0171250:CDS 30.0%
! TGTTCGAAATAATTTGCGAA+GGG + chr1_4:55920008-55920027 Msa0171250:CDS 30.0%
AAAGTAACAAAAAAGCTGCA+AGG + chr1_4:55920224-55920243 Msa0171250:intron 30.0%
!! ATGTAAAGCAAATTTTGGCA+TGG - chr1_4:55920256-55920275 None:intergenic 30.0%
! TGTGCATGTAAAGCAAATTT+TGG - chr1_4:55920261-55920280 None:intergenic 30.0%
AGATGAGATCTACACATTTA+AGG + chr1_4:55920394-55920413 Msa0171250:intron 30.0%
TCAGTCATCAATGTTTACAA+TGG - chr1_4:55920447-55920466 None:intergenic 30.0%
GATTGTGAACAAATATATCG+GGG + chr1_4:55920521-55920540 Msa0171250:intron 30.0%
!! TTAGATGTTTTGCTATCACA+TGG + chr1_4:55920586-55920605 Msa0171250:intron 30.0%
!!! CTAGTCTTTTTTTAGTTCAC+AGG - chr1_4:55920840-55920859 None:intergenic 30.0%
! AAAAGACTAGTTCCAACAAT+TGG + chr1_4:55920850-55920869 Msa0171250:intron 30.0%
AACATATGATGCATTGCAAA+GGG - chr1_4:55920953-55920972 None:intergenic 30.0%
TAACATATGATGCATTGCAA+AGG - chr1_4:55920954-55920973 None:intergenic 30.0%
!!! GGAAGCAATTTTGATTGTTA+AGG + chr1_4:55921133-55921152 Msa0171250:CDS 30.0%
!!! ATTTTGATTGTTAAGGTGCA+TGG + chr1_4:55921140-55921159 Msa0171250:CDS 30.0%
!! TTTTGATTGTTAAGGTGCAT+GGG + chr1_4:55921141-55921160 Msa0171250:CDS 30.0%
! TTTTCTTGGATGAATAACAG+TGG - chr1_4:55921208-55921227 None:intergenic 30.0%
!!! TTGAGTCAATTGGTTTTTCT+TGG - chr1_4:55921222-55921241 None:intergenic 30.0%
TCAAACGTTGAAAATCAGAT+CGG - chr1_4:55921283-55921302 None:intergenic 30.0%
TTTGAGCAATTCATTTGATG+TGG + chr1_4:55921298-55921317 Msa0171250:CDS 30.0%
AAATAGTCACTCACCTTAAT+TGG - chr1_4:55921360-55921379 None:intergenic 30.0%
TTATTATTGCATGCATACAC+AGG - chr1_4:55921445-55921464 None:intergenic 30.0%
GCAAACATCTTGATTATGTT+TGG + chr1_4:55921465-55921484 Msa0171250:intron 30.0%
TATGGTAGATAGACATTTAC+AGG - chr1_4:55921634-55921653 None:intergenic 30.0%
! TTGCTTGGAATTTTGTGTAA+TGG + chr1_4:55921797-55921816 Msa0171250:three_prime_UTR 30.0%
GCGTTTCGATCTTTATCTAA+TGG + chr1_4:55911107-55911126 Msa0171250:exon 35.0%
! TATAAGAAAGTGCGTTGTTG+AGG - chr1_4:55911180-55911199 None:intergenic 35.0%
! GTTGGTGGAATGAATAGAAT+TGG - chr1_4:55911253-55911272 None:intergenic 35.0%
GTGATTGTGATTGAAAGAAC+AGG - chr1_4:55911780-55911799 None:intergenic 35.0%
! TAGGAATAGTCTTTAGGGAT+AGG + chr1_4:55912115-55912134 Msa0171250:intron 35.0%
AACTTATGGTCTGTTTGGAT+TGG - chr1_4:55912497-55912516 None:intergenic 35.0%
CCATAAACTTATGGTCTGTT+TGG - chr1_4:55912502-55912521 None:intergenic 35.0%
CCAAACAGACCATAAGTTTA+TGG + chr1_4:55912499-55912518 Msa0171250:intron 35.0%
GGGTTATAAAAATATGGCCT+TGG + chr1_4:55912806-55912825 Msa0171250:CDS 35.0%
! TATAAAAATATGGCCTTGGG+AGG + chr1_4:55912810-55912829 Msa0171250:CDS 35.0%
ATCGGATAATTCAAAGGCAA+AGG + chr1_4:55912975-55912994 Msa0171250:CDS 35.0%
ATAATTCAAAGGCAAAGGTG+TGG + chr1_4:55912980-55912999 Msa0171250:CDS 35.0%
AACACACTCTCTTACACAAA+TGG + chr1_4:55913483-55913502 Msa0171250:intron 35.0%
AGTCAACAATGTTCAAAGGA+TGG + chr1_4:55913527-55913546 Msa0171250:intron 35.0%
CGGTTTACTAAGTCAAGAAT+TGG - chr1_4:55913564-55913583 None:intergenic 35.0%
TTTATCACTTGACTTACTCC+CGG - chr1_4:55913584-55913603 None:intergenic 35.0%
AACTTCAGTTCAAGGTAAAG+TGG + chr1_4:55913854-55913873 Msa0171250:intron 35.0%
ACTTCAGTTCAAGGTAAAGT+GGG + chr1_4:55913855-55913874 Msa0171250:intron 35.0%
!! TGTATACTTTTCAAGCCCAA+GGG + chr1_4:55913889-55913908 Msa0171250:intron 35.0%
GTGCTAGAGATGTAATACTT+CGG + chr1_4:55913929-55913948 Msa0171250:intron 35.0%
TATGTGTGTCTTTGTCATTG+TGG - chr1_4:55914060-55914079 None:intergenic 35.0%
ACAATGACAAAGACACACAT+AGG + chr1_4:55914059-55914078 Msa0171250:intron 35.0%
! GTATGTCAAGATTTTACGCT+TGG - chr1_4:55914095-55914114 None:intergenic 35.0%
! AGACTTGGTACCAATATGTA+TGG + chr1_4:55914363-55914382 Msa0171250:intron 35.0%
AAACCCATGAAAGAACAACT+AGG + chr1_4:55914484-55914503 Msa0171250:intron 35.0%
CTTACCTAGTTGTTCTTTCA+TGG - chr1_4:55914491-55914510 None:intergenic 35.0%
AGCATGCATCGGAATAAAAA+AGG - chr1_4:55914569-55914588 None:intergenic 35.0%
TATACATCTCATGTCATAGG+GGG - chr1_4:55914602-55914621 None:intergenic 35.0%
CTAGTGCTTATTCATGTACA+GGG + chr1_4:55914749-55914768 Msa0171250:intron 35.0%
TTTCAATTCAGATGGCCAAA+TGG + chr1_4:55914800-55914819 Msa0171250:CDS 35.0%
CTTTCCTAGAACTTGAAACA+AGG - chr1_4:55914869-55914888 None:intergenic 35.0%
ACAGAAACCAAAGTTCCATT+GGG + chr1_4:55914889-55914908 Msa0171250:CDS 35.0%
GCACTTGTAGTAACAATTGA+TGG + chr1_4:55915011-55915030 Msa0171250:CDS 35.0%
! ATTGATGGAATGATTTGGAC+AGG + chr1_4:55915026-55915045 Msa0171250:CDS 35.0%
ATTTGGACAGGATATTCAAG+TGG + chr1_4:55915038-55915057 Msa0171250:CDS 35.0%
TATGGAATGCAAATTTGGGT+AGG + chr1_4:55915143-55915162 Msa0171250:CDS 35.0%
!!! CCAACTGTCATTTTTACAAC+TGG - chr1_4:55915242-55915261 None:intergenic 35.0%
CCAGTTGTAAAAATGACAGT+TGG + chr1_4:55915239-55915258 Msa0171250:CDS 35.0%
GTAAAAATGACAGTTGGAGT+TGG + chr1_4:55915245-55915264 Msa0171250:CDS 35.0%
AGTTGGCTATGTATTCACAT+TGG + chr1_4:55915262-55915281 Msa0171250:CDS 35.0%
GAACACAAAATGCTATCAAG+AGG - chr1_4:55915332-55915351 None:intergenic 35.0%
! ATTTTGTGTTCAGAATTGGG+CGG + chr1_4:55915341-55915360 Msa0171250:CDS 35.0%
ACCATGCAAAAATTCATGGA+TGG + chr1_4:55915697-55915716 Msa0171250:intron 35.0%
! ACCATCCATGAATTTTTGCA+TGG - chr1_4:55915701-55915720 None:intergenic 35.0%
TATATGCTTGAGAGAGATAG+GGG - chr1_4:55915842-55915861 None:intergenic 35.0%
CTATATGCTTGAGAGAGATA+GGG - chr1_4:55915843-55915862 None:intergenic 35.0%
GGATATGATAGACAAAACAC+TGG + chr1_4:55915901-55915920 Msa0171250:CDS 35.0%
ATAGACAAAACACTGGATGA+AGG + chr1_4:55915908-55915927 Msa0171250:CDS 35.0%
CATTTAAACGAATTGGATCC+AGG + chr1_4:55915936-55915955 Msa0171250:CDS 35.0%
ATTAAGAGCCCAACTATTGA+TGG - chr1_4:55916182-55916201 None:intergenic 35.0%
! GGTAGTTGGTATTTCATTTC+AGG - chr1_4:55916210-55916229 None:intergenic 35.0%
CGACAATTGAAAAACCAACA+AGG - chr1_4:55916276-55916295 None:intergenic 35.0%
!!! TTGTCGTTGATTTTGTGTTC+AGG + chr1_4:55916290-55916309 Msa0171250:intron 35.0%
!!! TGTCGTTGATTTTGTGTTCA+GGG + chr1_4:55916291-55916310 Msa0171250:intron 35.0%
!! GATTTTAGGTGTAGTGGAAA+TGG - chr1_4:55916647-55916666 None:intergenic 35.0%
TGTCATCCTAACCATTGATA+TGG + chr1_4:55916991-55917010 Msa0171250:intron 35.0%
AACCTCTTAAATACAACACC+TGG + chr1_4:55917177-55917196 Msa0171250:CDS 35.0%
! TACCAGGTGTTGTATTTAAG+AGG - chr1_4:55917182-55917201 None:intergenic 35.0%
AACAGTAATAGACAGAGGAA+AGG - chr1_4:55917205-55917224 None:intergenic 35.0%
TGAGAAACAGTAATAGACAG+AGG - chr1_4:55917210-55917229 None:intergenic 35.0%
TCTTGACCTGTTTATAGATC+TGG + chr1_4:55917251-55917270 Msa0171250:intron 35.0%
!! TTATAGATCTGGCTTGCTAT+TGG + chr1_4:55917262-55917281 Msa0171250:intron 35.0%
ACATTTGTACCACGAAACAT+TGG - chr1_4:55917323-55917342 None:intergenic 35.0%
GCAGACATGATTGTATTTCT+TGG + chr1_4:55917463-55917482 Msa0171250:CDS 35.0%
!! CTTTGATTGGCTTAGAGAAA+GGG + chr1_4:55917552-55917571 Msa0171250:CDS 35.0%
TGTCGTTCAAACTTGTATGT+GGG - chr1_4:55917649-55917668 None:intergenic 35.0%
! TCTCTGAAAACTGAACTTGA+AGG + chr1_4:55917777-55917796 Msa0171250:intron 35.0%
! CTCTGAAAACTGAACTTGAA+GGG + chr1_4:55917778-55917797 Msa0171250:intron 35.0%
! GATTTTCACTGTTCTCTTCA+TGG + chr1_4:55917963-55917982 Msa0171250:intron 35.0%
!! TATTTTGAAGGGTATGACTC+TGG + chr1_4:55918251-55918270 Msa0171250:intron 35.0%
ATACAAAATTCTGTCACACC+AGG - chr1_4:55918297-55918316 None:intergenic 35.0%
TTTGGTTGCTGAATGCAATT+TGG + chr1_4:55918334-55918353 Msa0171250:CDS 35.0%
GATCAAAATACCCTACCATA+AGG + chr1_4:55918427-55918446 Msa0171250:intron 35.0%
TAATACGCACAAAGTCCTTA+TGG - chr1_4:55918445-55918464 None:intergenic 35.0%
CACACACATATGCATAAAAG+AGG + chr1_4:55918561-55918580 Msa0171250:intron 35.0%
GTACATCACAAGAATATCAG+AGG + chr1_4:55918628-55918647 Msa0171250:intron 35.0%
AAGAATATCAGAGGATTGAC+AGG + chr1_4:55918637-55918656 Msa0171250:intron 35.0%
! ACTTTGCCGTACTTTTATTG+TGG + chr1_4:55918782-55918801 Msa0171250:intron 35.0%
! CTTTGCCGTACTTTTATTGT+GGG + chr1_4:55918783-55918802 Msa0171250:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr1_4:55919299-55919318 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr1_4:55919299-55919318 Msa0171250:intron 35.0%
!! CTGAAGAAAGTGTCACATAT+AGG - chr1_4:55919380-55919399 None:intergenic 35.0%
ATGTGACACTTTCTTCAGAT+CGG + chr1_4:55919382-55919401 Msa0171250:intron 35.0%
! TGGAGTTTTTGTGATGTGTA+GGG - chr1_4:55919460-55919479 None:intergenic 35.0%
! ATGGAGTTTTTGTGATGTGT+AGG - chr1_4:55919461-55919480 None:intergenic 35.0%
TTGACAATGTCACATTGACA+TGG - chr1_4:55919480-55919499 None:intergenic 35.0%
TCAATGTGACATTGTCAAAG+CGG + chr1_4:55919482-55919501 Msa0171250:intron 35.0%
TACGCAAAATTAATGTGTCC+TGG - chr1_4:55919958-55919977 None:intergenic 35.0%
!! TAAAGCAAATTTTGGCATGG+CGG - chr1_4:55920253-55920272 None:intergenic 35.0%
TGAGATCTACACATTTAAGG+AGG + chr1_4:55920397-55920416 Msa0171250:intron 35.0%
AAATATATCGGGGAGTAAGT+TGG + chr1_4:55920531-55920550 Msa0171250:intron 35.0%
ATGCAGTCAATGTGAAAGAT+AGG + chr1_4:55920629-55920648 Msa0171250:intron 35.0%
TGACTGCTGATCAAATTGAA+CGG - chr1_4:55920740-55920759 None:intergenic 35.0%
CAAAACATCATACAGATGTG+TGG + chr1_4:55920758-55920777 Msa0171250:intron 35.0%
AAGACCAGATCAGATTATTG+AGG + chr1_4:55921022-55921041 Msa0171250:CDS 35.0%
GATACCTCAATAATCTGATC+TGG - chr1_4:55921029-55921048 None:intergenic 35.0%
!! ATGGTGTTGTACAAAACTCT+TGG + chr1_4:55921090-55921109 Msa0171250:CDS 35.0%
! AACCAATTGACTCAAGCAAA+CGG + chr1_4:55921227-55921246 Msa0171250:CDS 35.0%
AACTGATAAACTGTCTTGCA+AGG + chr1_4:55921409-55921428 Msa0171250:intron 35.0%
ACTGATAAACTGTCTTGCAA+GGG + chr1_4:55921410-55921429 Msa0171250:intron 35.0%
TTGTGGTTGAACTTGAATCA+TGG + chr1_4:55921523-55921542 Msa0171250:three_prime_UTR 35.0%
!!! GAGCTCCTTTTGGAATTAAA+TGG - chr1_4:55921604-55921623 None:intergenic 35.0%
! AGGTTAAATTGAGCTCCTTT+TGG - chr1_4:55921614-55921633 None:intergenic 35.0%
TTCCCTTTCAATTGTAGCTT+CGG - chr1_4:55921665-55921684 None:intergenic 35.0%
AATTGAAAGGGAAAATCCAG+TGG + chr1_4:55921672-55921691 Msa0171250:three_prime_UTR 35.0%
CTAGCATCTCATTATTTGCT+TGG + chr1_4:55921782-55921801 Msa0171250:three_prime_UTR 35.0%
GGAAAGAATATAGGGAGGAT+TGG - chr1_4:55911085-55911104 None:intergenic 40.0%
AAACGCGCGGAAAGAATATA+GGG - chr1_4:55911093-55911112 None:intergenic 40.0%
TAGATAAAGATCGAAACGCG+CGG - chr1_4:55911106-55911125 None:intergenic 40.0%
!!! AAGATGAAGAAGCGTCGTTT+TGG - chr1_4:55911140-55911159 None:intergenic 40.0%
GGTGGAATGAATAGAATTGG+AGG - chr1_4:55911250-55911269 None:intergenic 40.0%
TTAAAGATCTATACGCGTCG+TGG + chr1_4:55911541-55911560 Msa0171250:CDS 40.0%
ATTTGTTTGGTTGCGGATGA+AGG + chr1_4:55911645-55911664 Msa0171250:CDS 40.0%
TTTGTTTGGTTGCGGATGAA+GGG + chr1_4:55911646-55911665 Msa0171250:CDS 40.0%
!! GCTGTTTTCGTAAGCTATCT+TGG + chr1_4:55912372-55912391 Msa0171250:intron 40.0%
ATCTATTCATCTGACAGAGG+AGG + chr1_4:55912843-55912862 Msa0171250:CDS 40.0%
TGTAGCCATTTGTAGATAGC+TGG - chr1_4:55912921-55912940 None:intergenic 40.0%
! TTTTTCATATCCTGTGGTCG+CGG + chr1_4:55913139-55913158 Msa0171250:intron 40.0%
TAAATATAATCCGCGACCAC+AGG - chr1_4:55913152-55913171 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+GGG + chr1_4:55913189-55913208 Msa0171250:intron 40.0%
AATCCTTAACAAGTGCCCTT+AGG + chr1_4:55913329-55913348 Msa0171250:intron 40.0%
CTTGCTAACAAGTGACCTAA+GGG - chr1_4:55913347-55913366 None:intergenic 40.0%
TCTTGCTAACAAGTGACCTA+AGG - chr1_4:55913348-55913367 None:intergenic 40.0%
!! CTGTATACTTTTCAAGCCCA+AGG + chr1_4:55913888-55913907 Msa0171250:intron 40.0%
TACATCTCTAGCACACATCT+CGG - chr1_4:55913923-55913942 None:intergenic 40.0%
AACAACCATAAGCTGTTACG+TGG - chr1_4:55913958-55913977 None:intergenic 40.0%
!!! GATTTTACGCTTGGTGTAAG+TGG - chr1_4:55914086-55914105 None:intergenic 40.0%
CTTGACATACTTACGTCCTT+TGG + chr1_4:55914105-55914124 Msa0171250:intron 40.0%
CATTTATGGAGAGCTACCAA+AGG - chr1_4:55914124-55914143 None:intergenic 40.0%
AAAAAGGACACGAGAGATTC+AGG - chr1_4:55914553-55914572 None:intergenic 40.0%
GCTAGTGCTTATTCATGTAC+AGG + chr1_4:55914748-55914767 Msa0171250:intron 40.0%
! AGTCTGATCGATTCTCCATT+TGG - chr1_4:55914818-55914837 None:intergenic 40.0%
CCTAGAACTTGAAACAAGGT+CGG - chr1_4:55914865-55914884 None:intergenic 40.0%
GACAGAAACCAAAGTTCCAT+TGG + chr1_4:55914888-55914907 Msa0171250:CDS 40.0%
GAAAGAACCCAATGGAACTT+TGG - chr1_4:55914899-55914918 None:intergenic 40.0%
AACATTGAACAGCAAATGGG+TGG - chr1_4:55915115-55915134 None:intergenic 40.0%
ATTTGGGTAGGTTATGTGTC+TGG + chr1_4:55915155-55915174 Msa0171250:CDS 40.0%
! GTATTCACATTGGCTAACCA+CGG + chr1_4:55915272-55915291 Msa0171250:CDS 40.0%
AAAATGCTATCAAGAGGTCC+TGG - chr1_4:55915326-55915345 None:intergenic 40.0%
TAAAGATCTTGAGTGGCACT+TGG + chr1_4:55915396-55915415 Msa0171250:CDS 40.0%
CTCAAGATTCCCTTACTTCA+TGG + chr1_4:55915441-55915460 Msa0171250:CDS 40.0%
AGAACCTAGCCATGAAGTAA+GGG - chr1_4:55915453-55915472 None:intergenic 40.0%
!! ATGTTGGCCTTGTTGTTGTT+GGG + chr1_4:55915483-55915502 Msa0171250:CDS 40.0%
TGATAGGTAAGAGTGAGAAC+AGG - chr1_4:55915747-55915766 None:intergenic 40.0%
ATGTGGGTAAGGTACATGAT+AGG - chr1_4:55915763-55915782 None:intergenic 40.0%
ACTGTGTATGTATGTGGGTA+AGG - chr1_4:55915774-55915793 None:intergenic 40.0%
CCTATATGCTTGAGAGAGAT+AGG - chr1_4:55915844-55915863 None:intergenic 40.0%
CCTATCTCTCTCAAGCATAT+AGG + chr1_4:55915841-55915860 Msa0171250:intron 40.0%
TCTCTCTCAAGCATATAGGT+AGG + chr1_4:55915845-55915864 Msa0171250:intron 40.0%
TCACGTGTATTTCTCCACAT+AGG - chr1_4:55915998-55916017 None:intergenic 40.0%
ATCGATGCACCATCAATAGT+TGG + chr1_4:55916170-55916189 Msa0171250:intron 40.0%
TCGATGCACCATCAATAGTT+GGG + chr1_4:55916171-55916190 Msa0171250:intron 40.0%
ACGTTCAAACTGAATGAGGA+CGG - chr1_4:55916231-55916250 None:intergenic 40.0%
! TTTTCGAAGTTCTGCCTTGT+TGG + chr1_4:55916259-55916278 Msa0171250:intron 40.0%
! TGGACGTGCTATTGGAAATA+AGG + chr1_4:55916375-55916394 Msa0171250:CDS 40.0%
! CGTGCTATTGGAAATAAGGT+AGG + chr1_4:55916379-55916398 Msa0171250:CDS 40.0%
! GATCCGACAGTTTTTCTTGT+AGG + chr1_4:55916502-55916521 Msa0171250:intron 40.0%
TAGCTCAACTGTGATTGAAC+CGG - chr1_4:55916821-55916840 None:intergenic 40.0%
!!! GAGTTAACCAGACTGGTTTT+AGG + chr1_4:55916858-55916877 Msa0171250:intron 40.0%
!!! TTAACCAGACTGGTTTTAGG+TGG + chr1_4:55916861-55916880 Msa0171250:intron 40.0%
TAAACCACCTAAAACCAGTC+TGG - chr1_4:55916868-55916887 None:intergenic 40.0%
TGGAAATTGATTGTCTCACC+AGG + chr1_4:55917011-55917030 Msa0171250:intron 40.0%
GGAAATTGATTGTCTCACCA+GGG + chr1_4:55917012-55917031 Msa0171250:intron 40.0%
TGAGGGTTAGAGTGTATGAT+CGG + chr1_4:55917046-55917065 Msa0171250:CDS 40.0%
GTCGACTAAAGGACATTGTT+CGG - chr1_4:55917152-55917171 None:intergenic 40.0%
AGCAAGCCAGATCTATAAAC+AGG - chr1_4:55917260-55917279 None:intergenic 40.0%
GCTTCTATTCCAATGTTTCG+TGG + chr1_4:55917311-55917330 Msa0171250:CDS 40.0%
!! GAAGCACTGATTCTTGAGAT+TGG + chr1_4:55917403-55917422 Msa0171250:intron 40.0%
!! GCTTTGATTGGCTTAGAGAA+AGG + chr1_4:55917551-55917570 Msa0171250:CDS 40.0%
! GTGTCGTTCAAACTTGTATG+TGG - chr1_4:55917650-55917669 None:intergenic 40.0%
ACACACACACACACACAAAT+TGG + chr1_4:55917754-55917773 Msa0171250:intron 40.0%
TTCACTGTTCTCTTCATGGA+TGG + chr1_4:55917967-55917986 Msa0171250:intron 40.0%
TTGCTGAAATTGTAGGGTTG+AGG + chr1_4:55918000-55918019 Msa0171250:intron 40.0%
TGAAATTGTAGGGTTGAGGT+GGG + chr1_4:55918004-55918023 Msa0171250:intron 40.0%
GCAATACTGAAGAGACAACA+GGG - chr1_4:55918364-55918383 None:intergenic 40.0%
TGCAATACTGAAGAGACAAC+AGG - chr1_4:55918365-55918384 None:intergenic 40.0%
CTCTGACCCCTTTATTGATA+AGG + chr1_4:55918505-55918524 Msa0171250:intron 40.0%
GATCAGATTCAGAACCTGTT+GGG + chr1_4:55918597-55918616 Msa0171250:intron 40.0%
ATGTACTACTGAATCCCAAC+AGG - chr1_4:55918614-55918633 None:intergenic 40.0%
! TTTGCTAGAACAAGTTGGCT+TGG + chr1_4:55918745-55918764 Msa0171250:intron 40.0%
!!! CAAGTTGGCTTGGCAAATTT+TGG + chr1_4:55918755-55918774 Msa0171250:intron 40.0%
! GGAGTTTTTGTGATGTGTAG+GGG - chr1_4:55919459-55919478 None:intergenic 40.0%
CAAAGCGGCAATAGATGTTA+AGG + chr1_4:55919497-55919516 Msa0171250:intron 40.0%
! ATGTTTCCGAAAAGCATGAG+TGG + chr1_4:55919665-55919684 Msa0171250:intron 40.0%
CTCGAGTAGATGAACCAATA+CGG + chr1_4:55919819-55919838 Msa0171250:CDS 40.0%
CAAAAGAACCTCTCAACTGA+TGG - chr1_4:55920069-55920088 None:intergenic 40.0%
! CATCAGTTGAGAGGTTCTTT+TGG + chr1_4:55920067-55920086 Msa0171250:CDS 40.0%
AATATTACCTCAAGCCACCT+AGG - chr1_4:55920097-55920116 None:intergenic 40.0%
GTTTACAATGGACCTGTGTA+GGG - chr1_4:55920435-55920454 None:intergenic 40.0%
TGTTTACAATGGACCTGTGT+AGG - chr1_4:55920436-55920455 None:intergenic 40.0%
! TCACATTGACTGCATGAAAG+TGG - chr1_4:55920624-55920643 None:intergenic 40.0%
! GGTGTTATGTCTGCATCATA+TGG + chr1_4:55920794-55920813 Msa0171250:intron 40.0%
! GGTCTTATAATACCAGTTGC+AGG - chr1_4:55921008-55921027 None:intergenic 40.0%
TCATGAGGAATTTCAGACTC+AGG + chr1_4:55921055-55921074 Msa0171250:CDS 40.0%
!! ACTCAGGAAGAGTTTGTTGA+TGG + chr1_4:55921071-55921090 Msa0171250:CDS 40.0%
CAAAATTGCTTCCTTGTCTC+TGG - chr1_4:55921126-55921145 None:intergenic 40.0%
! CACCTTAATTGGTGCTTCAA+GGG - chr1_4:55921349-55921368 None:intergenic 40.0%
! TCACCTTAATTGGTGCTTCA+AGG - chr1_4:55921350-55921369 None:intergenic 40.0%
! TTCTTTTCATAGGGAGCTTG+TGG + chr1_4:55921506-55921525 Msa0171250:intron 40.0%
GTACAGAGAAAGCAAATGCA+AGG + chr1_4:55921559-55921578 Msa0171250:three_prime_UTR 40.0%
AGCCGAAGCTACAATTGAAA+GGG + chr1_4:55921660-55921679 Msa0171250:three_prime_UTR 40.0%
GAAAATCCAGTGGCATGTTA+CGG + chr1_4:55921682-55921701 Msa0171250:three_prime_UTR 40.0%
AAAAAATCCGACGACGTTTG+TGG + chr1_4:55921912-55921931 Msa0171250:three_prime_UTR 40.0%
AAATGGAAAGAGCGAGCGTT+TGG - chr1_4:55911027-55911046 None:intergenic 45.0%
GAAACGCGCGGAAAGAATAT+AGG - chr1_4:55911094-55911113 None:intergenic 45.0%
GTTGTCGTTGGAAGAAGAAG+AGG - chr1_4:55911214-55911233 None:intergenic 45.0%
ATTGGAGCATGCAATCGAGA+CGG - chr1_4:55911278-55911297 None:intergenic 45.0%
TGAGTTTGCGTTCGAGGAAT+TGG - chr1_4:55911296-55911315 None:intergenic 45.0%
GAGAGGAGGTTTGAAGATTC+CGG - chr1_4:55911370-55911389 None:intergenic 45.0%
TAATTCGAGAGAAGGAGGAC+GGG - chr1_4:55911412-55911431 None:intergenic 45.0%
GTAATTCGAGAGAAGGAGGA+CGG - chr1_4:55911413-55911432 None:intergenic 45.0%
TGAGGACGTAATTCGAGAGA+AGG - chr1_4:55911420-55911439 None:intergenic 45.0%
! GTCCAAACCGATTCACGAAA+TGG - chr1_4:55911615-55911634 None:intergenic 45.0%
!! TGAATCGGTTTGGACTTCTC+CGG + chr1_4:55911620-55911639 Msa0171250:CDS 45.0%
!! ATGAAGGGAATAGGTTGGTG+TGG + chr1_4:55911661-55911680 Msa0171250:CDS 45.0%
TGTGGAGTGGACATAGAGAT+GGG + chr1_4:55911679-55911698 Msa0171250:CDS 45.0%
GAAGATTCGCTGTTGGCAAA+TGG + chr1_4:55911701-55911720 Msa0171250:CDS 45.0%
TTATCTTGGCAAGCTCATCG+TGG + chr1_4:55911753-55911772 Msa0171250:CDS 45.0%
! GTTGTTACTTGTGACTGCGA+TGG + chr1_4:55912085-55912104 Msa0171250:intron 45.0%
TGACTGCGATGGAAGTCTTT+AGG + chr1_4:55912096-55912115 Msa0171250:intron 45.0%
GATTTGATCTAGGGGATCTG+TGG + chr1_4:55912767-55912786 Msa0171250:intron 45.0%
!! GATTTTTCAACAGCCTCCCA+AGG - chr1_4:55912826-55912845 None:intergenic 45.0%
TTCATCTGACAGAGGAGGAA+AGG + chr1_4:55912848-55912867 Msa0171250:CDS 45.0%
!! AGAGATCCTACGTTGACTTG+AGG + chr1_4:55912893-55912912 Msa0171250:CDS 45.0%
AGGAGCCAGCTATCTACAAA+TGG + chr1_4:55912913-55912932 Msa0171250:CDS 45.0%
GAAATGCTAACAAGTGCCCT+TGG + chr1_4:55913188-55913207 Msa0171250:intron 45.0%
AATGCTAACAAGTGCCCTTG+GGG + chr1_4:55913190-55913209 Msa0171250:intron 45.0%
CTTCTTATCAAGTGCCCCAA+GGG - chr1_4:55913207-55913226 None:intergenic 45.0%
ACTTCTTATCAAGTGCCCCA+AGG - chr1_4:55913208-55913227 None:intergenic 45.0%
!! TGACCTAAGGGCACTTGTTA+AGG - chr1_4:55913335-55913354 None:intergenic 45.0%
TAGCACACATCTCGGACAAA+AGG - chr1_4:55913915-55913934 None:intergenic 45.0%
CAAGAAGCAAGTTAGACCCT+AGG - chr1_4:55914420-55914439 None:intergenic 45.0%
GCCTTCAATGCAAGACTTTC+CGG + chr1_4:55914839-55914858 Msa0171250:CDS 45.0%
!! CCGACCTTGTTTCAAGTTCT+AGG + chr1_4:55914862-55914881 Msa0171250:CDS 45.0%
CGCTCACGTAATGCCATAAT+GGG + chr1_4:55914921-55914940 Msa0171250:CDS 45.0%
GCTCACGTAATGCCATAATG+GGG + chr1_4:55914922-55914941 Msa0171250:CDS 45.0%
CTCACGTAATGCCATAATGG+GGG + chr1_4:55914923-55914942 Msa0171250:CDS 45.0%
! GAGCCTTTGGAGATGAGAAT+CGG + chr1_4:55914979-55914998 Msa0171250:CDS 45.0%
TCTCCGATTCTCATCTCCAA+AGG - chr1_4:55914985-55915004 None:intergenic 45.0%
! AGGATATTCAAGTGGCTTGC+TGG + chr1_4:55915046-55915065 Msa0171250:CDS 45.0%
TGGAAATGGCAATCGCATAC+AGG + chr1_4:55915079-55915098 Msa0171250:CDS 45.0%
TTATGTGTCTGGCATTGTCC+AGG + chr1_4:55915166-55915185 Msa0171250:CDS 45.0%
ACCTGAAGGGTAACCTGATA+GGG + chr1_4:55915195-55915214 Msa0171250:CDS 45.0%
TTGAGTGGCACTTGGAATGT+TGG + chr1_4:55915404-55915423 Msa0171250:CDS 45.0%
GATTCCCTTACTTCATGGCT+AGG + chr1_4:55915446-55915465 Msa0171250:CDS 45.0%
CAGAACCTAGCCATGAAGTA+AGG - chr1_4:55915454-55915473 None:intergenic 45.0%
TACTTCATGGCTAGGTTCTG+TGG + chr1_4:55915454-55915473 Msa0171250:CDS 45.0%
AACAACAAGGCCAACATCTG+AGG - chr1_4:55915480-55915499 None:intergenic 45.0%
!! GATGTTGGCCTTGTTGTTGT+TGG + chr1_4:55915482-55915501 Msa0171250:CDS 45.0%
CTTGCAACCCAACAACAACA+AGG - chr1_4:55915493-55915512 None:intergenic 45.0%
! TGTTGTTGTTGGGTTGCAAG+AGG + chr1_4:55915493-55915512 Msa0171250:CDS 45.0%
TGGGTTGCAAGAGGTTGAAA+TGG + chr1_4:55915502-55915521 Msa0171250:CDS 45.0%
GGGTTGCAAGAGGTTGAAAT+GGG + chr1_4:55915503-55915522 Msa0171250:CDS 45.0%
!! GGGGGTGTTATGAACAAGAA+AGG - chr1_4:55915816-55915835 None:intergenic 45.0%
TTGAGAGAGATAGGGGTTAG+GGG - chr1_4:55915835-55915854 None:intergenic 45.0%
CTTGAGAGAGATAGGGGTTA+GGG - chr1_4:55915836-55915855 None:intergenic 45.0%
CTCAAGCATATAGGTAGGAC+TGG + chr1_4:55915850-55915869 Msa0171250:intron 45.0%
AAGCATATAGGTAGGACTGG+AGG + chr1_4:55915853-55915872 Msa0171250:intron 45.0%
AGCATATAGGTAGGACTGGA+GGG + chr1_4:55915854-55915873 Msa0171250:intron 45.0%
AACTGAATGAGGACGGTAGT+TGG - chr1_4:55916224-55916243 None:intergenic 45.0%
ACTTCATGTTGGGGATGTTG+AGG + chr1_4:55916330-55916349 Msa0171250:CDS 45.0%
CTATGCTTTGCAAGCTGGTT+TGG + chr1_4:55916419-55916438 Msa0171250:intron 45.0%
GCTGCACATTTAGATGCAGT+TGG + chr1_4:55917096-55917115 Msa0171250:CDS 45.0%
!! GAGGTTTGTTGGTCGACTAA+AGG - chr1_4:55917163-55917182 None:intergenic 45.0%
!! ATAGACAGAGGAAAGGTACC+AGG - chr1_4:55917198-55917217 None:intergenic 45.0%
TTGGTACTTTCTGTTGCAGC+TGG + chr1_4:55917281-55917300 Msa0171250:intron 45.0%
AGGGATACCTGAGTTATCTG+AGG + chr1_4:55917441-55917460 Msa0171250:CDS 45.0%
ATGTCTGCCTCAGATAACTC+AGG - chr1_4:55917451-55917470 None:intergenic 45.0%
TTCGAGCTGAAATGGAAGCT+GGG + chr1_4:55917581-55917600 Msa0171250:CDS 45.0%
TTACTGCTTCACGCATTCCT+TGG - chr1_4:55917615-55917634 None:intergenic 45.0%
CGTTCAAACTTGTATGTGGG+AGG - chr1_4:55917646-55917665 None:intergenic 45.0%
AAGTTTGAACGACACCAAGC+TGG + chr1_4:55917655-55917674 Msa0171250:CDS 45.0%
TGTGTGTGTGTGTGTGTGTT+GGG - chr1_4:55917697-55917716 None:intergenic 45.0%
CATTATTACGAGGTGAGGCT+GGG - chr1_4:55917944-55917963 None:intergenic 45.0%
TCATTATTACGAGGTGAGGC+TGG - chr1_4:55917945-55917964 None:intergenic 45.0%
CTGAAATTGTAGGGTTGAGG+TGG + chr1_4:55918003-55918022 Msa0171250:intron 45.0%
GAAATTGTAGGGTTGAGGTG+GGG + chr1_4:55918005-55918024 Msa0171250:intron 45.0%
TTTGGGTGCTTGCAACTTCA+TGG + chr1_4:55918083-55918102 Msa0171250:intron 45.0%
AAATTCTGTCACACCAGGCA+GGG - chr1_4:55918292-55918311 None:intergenic 45.0%
AAAATTCTGTCACACCAGGC+AGG - chr1_4:55918293-55918312 None:intergenic 45.0%
TCGTGATAGTCGCTCTTCTT+TGG + chr1_4:55918316-55918335 Msa0171250:CDS 45.0%
CGCACAAAGTCCTTATGGTA+GGG - chr1_4:55918440-55918459 None:intergenic 45.0%
ACGCACAAAGTCCTTATGGT+AGG - chr1_4:55918441-55918460 None:intergenic 45.0%
CGATCAGATTCAGAACCTGT+TGG + chr1_4:55918596-55918615 Msa0171250:intron 45.0%
! GTGCTTCCACTCATGCTTTT+CGG - chr1_4:55919674-55919693 None:intergenic 45.0%
ACTATCTGTGACATCCATGC+AGG - chr1_4:55919759-55919778 None:intergenic 45.0%
AGATGAACCAATACGGAGAC+AGG + chr1_4:55919826-55919845 Msa0171250:CDS 45.0%
TACTGTACTGGAGGATCAGA+AGG + chr1_4:55920036-55920055 Msa0171250:CDS 45.0%
GCAACAAACCATCAGTTGAG+AGG + chr1_4:55920058-55920077 Msa0171250:CDS 45.0%
! GAGGTTCTTTTGGATTGCCT+AGG + chr1_4:55920077-55920096 Msa0171250:CDS 45.0%
! GTTCTTTTGGATTGCCTAGG+TGG + chr1_4:55920080-55920099 Msa0171250:CDS 45.0%
AAGTTGAAGAAGCCCTACAC+AGG + chr1_4:55920420-55920439 Msa0171250:intron 45.0%
TAGTGGAGATAAGACTGCTG+AGG + chr1_4:55920475-55920494 Msa0171250:intron 45.0%
! TTTTGGTCAGCTCACTCTTG+TGG + chr1_4:55920697-55920716 Msa0171250:intron 45.0%
ATGATGCAGACATAACACCC+CGG - chr1_4:55920793-55920812 None:intergenic 45.0%
ATTCAGGTAAGTCCTGCAAC+TGG + chr1_4:55920993-55921012 Msa0171250:intron 45.0%
! TGAGGTATCAGTGCATCATG+AGG + chr1_4:55921040-55921059 Msa0171250:CDS 45.0%
AGCCGTTTGCTTGAGTCAAT+TGG - chr1_4:55921232-55921251 None:intergenic 45.0%
ATCGGTGAAGTACACTTCCT+TGG - chr1_4:55921265-55921284 None:intergenic 45.0%
GGCTATGCAATTTATGCAGC+TGG - chr1_4:55921328-55921347 None:intergenic 45.0%
! AGCCCTTGAAGCACCAATTA+AGG + chr1_4:55921344-55921363 Msa0171250:exon 45.0%
GTAGCTTCGGCTGTTTAGTA+TGG - chr1_4:55921652-55921671 None:intergenic 45.0%
CAGCCGAAGCTACAATTGAA+AGG + chr1_4:55921659-55921678 Msa0171250:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAAATATTG+GGG - chr1_4:55916902-55916921 None:intergenic 5.0%
!!! ATAAGTAATTTTTTTTTTAT+AGG + chr1_4:55919254-55919273 Msa0171250:intron 5.0%
!!! TAAGTAATTTTTTTTTTATA+GGG + chr1_4:55919255-55919274 Msa0171250:intron 5.0%
TATGTTGTGACGAACCACGC+TGG - chr1_4:55910996-55911015 None:intergenic 50.0%
! GAAAGTGCGTTGTTGAGGAG+TGG - chr1_4:55911175-55911194 None:intergenic 50.0%
GTCGTTGGAAGAAGAAGAGG+AGG - chr1_4:55911211-55911230 None:intergenic 50.0%
TGAAACGTCGTCGTTGTCGT+TGG - chr1_4:55911226-55911245 None:intergenic 50.0%
AGATGGTGAGTTTGCGTTCG+AGG - chr1_4:55911302-55911321 None:intergenic 50.0%
TGGCGATGAATTCAGGGAGA+GGG - chr1_4:55911335-55911354 None:intergenic 50.0%
TTGGCGATGAATTCAGGGAG+AGG - chr1_4:55911336-55911355 None:intergenic 50.0%
CTCCCTGAATTCATCGCCAA+AGG + chr1_4:55911336-55911355 Msa0171250:CDS 50.0%
CGCCTTTGGCGATGAATTCA+GGG - chr1_4:55911341-55911360 None:intergenic 50.0%
CCTGAATTCATCGCCAAAGG+CGG + chr1_4:55911339-55911358 Msa0171250:CDS 50.0%
GGACGTAATTCGAGAGAAGG+AGG - chr1_4:55911417-55911436 None:intergenic 50.0%
CCAATCTGAGTCTCGCGTAA+GGG - chr1_4:55911444-55911463 None:intergenic 50.0%
TCCAATCTGAGTCTCGCGTA+AGG - chr1_4:55911445-55911464 None:intergenic 50.0%
TACGCGAGACTCAGATTGGA+CGG + chr1_4:55911445-55911464 Msa0171250:CDS 50.0%
TTGCGACCGAGTCGCAATTA+TGG + chr1_4:55911484-55911503 Msa0171250:CDS 50.0%
CGCAGACCATAATTGCGACT+CGG - chr1_4:55911493-55911512 None:intergenic 50.0%
TTATGGTCTGCGACTGAACG+TGG + chr1_4:55911501-55911520 Msa0171250:CDS 50.0%
! CTGAACGTGGACTACGATTC+TGG + chr1_4:55911514-55911533 Msa0171250:CDS 50.0%
GATCTATACGCGTCGTGGTA+CGG + chr1_4:55911546-55911565 Msa0171250:CDS 50.0%
GAGTGCGCCATTTCGTGAAT+CGG + chr1_4:55911605-55911624 Msa0171250:CDS 50.0%
CGCCATTTCGTGAATCGGTT+TGG + chr1_4:55911610-55911629 Msa0171250:CDS 50.0%
! GACTTCTCCGGCGATTTGTT+TGG + chr1_4:55911632-55911651 Msa0171250:CDS 50.0%
! TCCGGCGATTTGTTTGGTTG+CGG + chr1_4:55911638-55911657 Msa0171250:CDS 50.0%
TCCGCAACCAAACAAATCGC+CGG - chr1_4:55911642-55911661 None:intergenic 50.0%
TGGTTGCGGATGAAGGGAAT+AGG + chr1_4:55911652-55911671 Msa0171250:CDS 50.0%
TGCGGATGAAGGGAATAGGT+TGG + chr1_4:55911656-55911675 Msa0171250:CDS 50.0%
GTGTGGAGTGGACATAGAGA+TGG + chr1_4:55911678-55911697 Msa0171250:CDS 50.0%
GAGATGGGAAGATTCGCTGT+TGG + chr1_4:55911694-55911713 Msa0171250:CDS 50.0%
TGATCTAGGGGATCTGTGGT+CGG + chr1_4:55912771-55912790 Msa0171250:intron 50.0%
TACCACTAAGAGAGGCTGCT+AGG - chr1_4:55913049-55913068 None:intergenic 50.0%
ATCTCGGACAAAAGGCCCTT+GGG - chr1_4:55913907-55913926 None:intergenic 50.0%
GGCATCCACGTAACAGCTTA+TGG + chr1_4:55913950-55913969 Msa0171250:intron 50.0%
GCCGGAAAGTCTTGCATTGA+AGG - chr1_4:55914843-55914862 None:intergenic 50.0%
GAACTTGAAACAAGGTCGGC+CGG - chr1_4:55914861-55914880 None:intergenic 50.0%
!! TGAGCGCTGAAAGAACCCAA+TGG - chr1_4:55914907-55914926 None:intergenic 50.0%
GCGCTCACGTAATGCCATAA+TGG + chr1_4:55914920-55914939 Msa0171250:CDS 50.0%
!! AAGTGGCTTGCTGGTGCAAT+GGG + chr1_4:55915055-55915074 Msa0171250:CDS 50.0%
CTGGTGCAATGGGATGGAAA+TGG + chr1_4:55915065-55915084 Msa0171250:CDS 50.0%
GTCTGGCATTGTCCAGGTAT+TGG + chr1_4:55915172-55915191 Msa0171250:CDS 50.0%
!! TGTCCAGGTATTGGACCTGA+AGG + chr1_4:55915181-55915200 Msa0171250:CDS 50.0%
!! GTCCAGGTATTGGACCTGAA+GGG + chr1_4:55915182-55915201 Msa0171250:CDS 50.0%
TACCCTTCAGGTCCAATACC+TGG - chr1_4:55915187-55915206 None:intergenic 50.0%
GACCTGAAGGGTAACCTGAT+AGG + chr1_4:55915194-55915213 Msa0171250:CDS 50.0%
CCTGAAGGGTAACCTGATAG+GGG + chr1_4:55915196-55915215 Msa0171250:CDS 50.0%
CTGAAGGGTAACCTGATAGG+GGG + chr1_4:55915197-55915216 Msa0171250:CDS 50.0%
! TTCACATTGGCTAACCACGG+TGG + chr1_4:55915275-55915294 Msa0171250:CDS 50.0%
GGCACTTGGAATGTTGGACA+AGG + chr1_4:55915410-55915429 Msa0171250:CDS 50.0%
TGAGAGAGATAGGGGTTAGG+GGG - chr1_4:55915834-55915853 None:intergenic 50.0%
GCTTGAGAGAGATAGGGGTT+AGG - chr1_4:55915837-55915856 None:intergenic 50.0%
ATTGGATCCAGGCAACTTGC+AGG + chr1_4:55915947-55915966 Msa0171250:CDS 50.0%
GTGGAGAAATACACGTGAGC+TGG + chr1_4:55916000-55916019 Msa0171250:intron 50.0%
TCATGTTGGGGATGTTGAGG+CGG + chr1_4:55916333-55916352 Msa0171250:CDS 50.0%
ATAGCACGTCCAAAGCCACA+TGG - chr1_4:55916367-55916386 None:intergenic 50.0%
!! TGTGGCTTTGGACGTGCTAT+TGG + chr1_4:55916367-55916386 Msa0171250:CDS 50.0%
TGCTGCTATGCTTTGCAAGC+TGG + chr1_4:55916414-55916433 Msa0171250:CDS 50.0%
! ATTGGTTTCCAGCCTGCAGA+AGG + chr1_4:55917421-55917440 Msa0171250:intron 50.0%
TTGGTTTCCAGCCTGCAGAA+GGG + chr1_4:55917422-55917441 Msa0171250:intron 50.0%
AACTCAGGTATCCCTTCTGC+AGG - chr1_4:55917436-55917455 None:intergenic 50.0%
GGATCAGCTTCGAGCTGAAA+TGG + chr1_4:55917573-55917592 Msa0171250:CDS 50.0%
CTTCGAGCTGAAATGGAAGC+TGG + chr1_4:55917580-55917599 Msa0171250:CDS 50.0%
TGCTTCACGCATTCCTTGGA+AGG - chr1_4:55917611-55917630 None:intergenic 50.0%
TGAACGACACCAAGCTGGTT+TGG + chr1_4:55917660-55917679 Msa0171250:CDS 50.0%
GTGTGTGTGTGTGTGTGTTG+GGG - chr1_4:55917696-55917715 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGT+TGG - chr1_4:55917698-55917717 None:intergenic 50.0%
GGTGCTTGCAACTTCATGGA+TGG + chr1_4:55918087-55918106 Msa0171250:intron 50.0%
AAAAGAAACGCATCCCTGCC+TGG + chr1_4:55918276-55918295 Msa0171250:CDS 50.0%
GCAGGCTTCGTACCTATTGA+AGG - chr1_4:55919741-55919760 None:intergenic 50.0%
CAATAGGTACGAAGCCTGCA+TGG + chr1_4:55919742-55919761 Msa0171250:intron 50.0%
GTAGAAAAGATGCAGCGCAC+AGG - chr1_4:55919791-55919810 None:intergenic 50.0%
CCAAACTCCTGTCTCCGTAT+TGG - chr1_4:55919836-55919855 None:intergenic 50.0%
CCAATACGGAGACAGGAGTT+TGG + chr1_4:55919833-55919852 Msa0171250:CDS 50.0%
GATGACTGACGAGTGTGTAG+TGG + chr1_4:55920458-55920477 Msa0171250:intron 50.0%
TGGAGATAAGACTGCTGAGG+TGG + chr1_4:55920478-55920497 Msa0171250:intron 50.0%
GAACGGCGCAGCAATAAATG+TGG - chr1_4:55920723-55920742 None:intergenic 50.0%
GTGTGAAGACTCCAGAGACA+AGG + chr1_4:55921112-55921131 Msa0171250:CDS 50.0%
AACAGTGGTGAACACGCACT+CGG - chr1_4:55921193-55921212 None:intergenic 50.0%
TAAAGGGCCACAAACGTCGT+CGG - chr1_4:55921922-55921941 None:intergenic 50.0%
CGCGCGGAAAGAATATAGGG+AGG - chr1_4:55911090-55911109 None:intergenic 55.0%
TGTTGAGGAGTGGACGACAG+TGG - chr1_4:55911165-55911184 None:intergenic 55.0%
TGAATTCAGGGAGAGGGAGG+TGG - chr1_4:55911329-55911348 None:intergenic 55.0%
CGATGAATTCAGGGAGAGGG+AGG - chr1_4:55911332-55911351 None:intergenic 55.0%
CCGCCTTTGGCGATGAATTC+AGG - chr1_4:55911342-55911361 None:intergenic 55.0%
GAATTCATCGCCAAAGGCGG+CGG + chr1_4:55911342-55911361 Msa0171250:CDS 55.0%
AGGAGGACGGGAAGGATGTA+CGG - chr1_4:55911400-55911419 None:intergenic 55.0%
TGAGTCTCGCGTAAGGGATG+AGG - chr1_4:55911438-55911457 None:intergenic 55.0%
CCCTTACGCGAGACTCAGAT+TGG + chr1_4:55911441-55911460 Msa0171250:CDS 55.0%
! GAAGCAGGTGTTGTGAGGAG+TGG + chr1_4:55911573-55911592 Msa0171250:CDS 55.0%
!! GGGAATAGGTTGGTGTGGAG+TGG + chr1_4:55911666-55911685 Msa0171250:CDS 55.0%
GATCTAGGGGATCTGTGGTC+GGG + chr1_4:55912772-55912791 Msa0171250:intron 55.0%
GATCTGTGGTCGGGTTCAGA+AGG + chr1_4:55912781-55912800 Msa0171250:CDS 55.0%
TGTGGTCGGGTTCAGAAGGA+GGG + chr1_4:55912785-55912804 Msa0171250:CDS 55.0%
! GACAGAGGAGGAAAGGCACA+AGG + chr1_4:55912855-55912874 Msa0171250:CDS 55.0%
CTGGCTCCTCAAGTCAACGT+AGG - chr1_4:55912902-55912921 None:intergenic 55.0%
! AAGGCAAAGGTGTGGAGTGC+TGG + chr1_4:55912988-55913007 Msa0171250:CDS 55.0%
! AGGCAAAGGTGTGGAGTGCT+GGG + chr1_4:55912989-55913008 Msa0171250:CDS 55.0%
CTCCTAGCAGCCTCTCTTAG+TGG + chr1_4:55913044-55913063 Msa0171250:intron 55.0%
CATCTCGGACAAAAGGCCCT+TGG - chr1_4:55913908-55913927 None:intergenic 55.0%
TATTCCGATGCATGCTGCCC+TGG + chr1_4:55914573-55914592 Msa0171250:intron 55.0%
TGCAACTCGGCGAACAGCAT+CGG - chr1_4:55914952-55914971 None:intergenic 55.0%
TGTTCGCCGAGTTGCAGCAA+AGG + chr1_4:55914956-55914975 Msa0171250:CDS 55.0%
GTTCGCCGAGTTGCAGCAAA+GGG + chr1_4:55914957-55914976 Msa0171250:CDS 55.0%
AGGCTCCCTTTGCTGCAACT+CGG - chr1_4:55914965-55914984 None:intergenic 55.0%
GTTGCAGCAAAGGGAGCCTT+TGG + chr1_4:55914966-55914985 Msa0171250:CDS 55.0%
!! CAAGTGGCTTGCTGGTGCAA+TGG + chr1_4:55915054-55915073 Msa0171250:CDS 55.0%
CCCCTATCAGGTTACCCTTC+AGG - chr1_4:55915199-55915218 None:intergenic 55.0%
AGGGTAACCTGATAGGGGGT+TGG + chr1_4:55915201-55915220 Msa0171250:CDS 55.0%
GGGTAACCTGATAGGGGGTT+GGG + chr1_4:55915202-55915221 Msa0171250:CDS 55.0%
TAACCTGATAGGGGGTTGGG+TGG + chr1_4:55915205-55915224 Msa0171250:CDS 55.0%
GGATGGAACATCACCTCTCC+AGG + chr1_4:55915305-55915324 Msa0171250:CDS 55.0%
GCTATCAAGAGGTCCTGGAG+AGG - chr1_4:55915321-55915340 None:intergenic 55.0%
GGTTCTGTGGCCTCAGATGT+TGG + chr1_4:55915467-55915486 Msa0171250:CDS 55.0%
CAAGAGGTTGAAATGGGCGC+TGG + chr1_4:55915509-55915528 Msa0171250:CDS 55.0%
! GACTGGAGGGTAGTTCTGCT+GGG + chr1_4:55915867-55915886 Msa0171250:CDS 55.0%
ATCCAGGCAACTTGCAGGCT+TGG + chr1_4:55915952-55915971 Msa0171250:CDS 55.0%
! CAGGCTTGGTCATTGCTGTG+TGG + chr1_4:55915966-55915985 Msa0171250:CDS 55.0%
GCAGCAGTTCCATGTGGCTT+TGG + chr1_4:55916355-55916374 Msa0171250:CDS 55.0%
!! ACCAGGGAGCTGTTGCTTTG+AGG + chr1_4:55917028-55917047 Msa0171250:intron 55.0%
!! CCAGGGAGCTGTTGCTTTGA+GGG + chr1_4:55917029-55917048 Msa0171250:intron 55.0%
GAAGCTGGGAATGCCTTCCA+AGG + chr1_4:55917595-55917614 Msa0171250:CDS 55.0%
!! ACCAAGCTGGTTTGGCAGGT+TGG + chr1_4:55917668-55917687 Msa0171250:intron 55.0%
TTGTAGGGTTGAGGTGGGGA+AGG + chr1_4:55918009-55918028 Msa0171250:intron 55.0%
TGTAGGGTTGAGGTGGGGAA+GGG + chr1_4:55918010-55918029 Msa0171250:intron 55.0%
CGAAGGGCAGACTACTGTAC+TGG + chr1_4:55920024-55920043 Msa0171250:CDS 55.0%
AGGGCAGACTACTGTACTGG+AGG + chr1_4:55920027-55920046 Msa0171250:CDS 55.0%
TGGATTGCCTAGGTGGCTTG+AGG + chr1_4:55920087-55920106 Msa0171250:CDS 55.0%
AGATGTGTGGCCACAGTAGC+CGG + chr1_4:55920771-55920790 Msa0171250:intron 55.0%
ACATAACACCCCGGCTACTG+TGG - chr1_4:55920784-55920803 None:intergenic 55.0%
TGACTCAAGCAAACGGCTCC+AGG + chr1_4:55921234-55921253 Msa0171250:CDS 55.0%
TACACTTCCTTGGACGTGCC+TGG - chr1_4:55921255-55921274 None:intergenic 55.0%
CAACTGCCGTAACATGCCAC+TGG - chr1_4:55921691-55921710 None:intergenic 55.0%
CATGCAATCGAGACGGCGGT+TGG - chr1_4:55911271-55911290 None:intergenic 60.0%
GGAGCATGCAATCGAGACGG+CGG - chr1_4:55911275-55911294 None:intergenic 60.0%
TTCAGGGAGAGGGAGGTGGT+CGG - chr1_4:55911325-55911344 None:intergenic 60.0%
AGGACGGGAAGGATGTACGG+CGG - chr1_4:55911397-55911416 None:intergenic 60.0%
TCGAGAGAAGGAGGACGGGA+AGG - chr1_4:55911408-55911427 None:intergenic 60.0%
CTATACGCGTCGTGGTACGG+CGG + chr1_4:55911549-55911568 Msa0171250:CDS 60.0%
! GCGGAGAAGCAGGTGTTGTG+AGG + chr1_4:55911568-55911587 Msa0171250:CDS 60.0%
CTGTGGTCGGGTTCAGAAGG+AGG + chr1_4:55912784-55912803 Msa0171250:CDS 60.0%
GTGGTCGGGTTCAGAAGGAG+GGG + chr1_4:55912786-55912805 Msa0171250:CDS 60.0%
CATGTCATAGGGGGCGACCA+GGG - chr1_4:55914593-55914612 None:intergenic 60.0%
TCATGTCATAGGGGGCGACC+AGG - chr1_4:55914594-55914613 None:intergenic 60.0%
!! AGCATCGGCTGCCCCCATTA+TGG - chr1_4:55914937-55914956 None:intergenic 60.0%
!! GGCTTGCTGGTGCAATGGGA+TGG + chr1_4:55915059-55915078 Msa0171250:CDS 60.0%
GCTAACCACGGTGGCATACG+AGG + chr1_4:55915284-55915303 Msa0171250:CDS 60.0%
ACCACGGTGGCATACGAGGA+TGG + chr1_4:55915288-55915307 Msa0171250:CDS 60.0%
TCCATCCTCGTATGCCACCG+TGG - chr1_4:55915292-55915311 None:intergenic 60.0%
! GGACTGGAGGGTAGTTCTGC+TGG + chr1_4:55915866-55915885 Msa0171250:CDS 60.0%
! AGGGTAGTTCTGCTGGGCAG+TGG + chr1_4:55915873-55915892 Msa0171250:CDS 60.0%
! GTAGTTCTGCTGGGCAGTGG+TGG + chr1_4:55915876-55915895 Msa0171250:CDS 60.0%
GACCAAGCCTGCAAGTTGCC+TGG - chr1_4:55915957-55915976 None:intergenic 60.0%
CCCTCAAAGCAACAGCTCCC+TGG - chr1_4:55917032-55917051 None:intergenic 60.0%
CAGGTATCCCTTCTGCAGGC+TGG - chr1_4:55917432-55917451 None:intergenic 60.0%
!! CGACACCAAGCTGGTTTGGC+AGG + chr1_4:55917664-55917683 Msa0171250:CDS 60.0%
GCCAACCTGCCAAACCAGCT+TGG - chr1_4:55917672-55917691 None:intergenic 60.0%
AGATGCAGCGCACAGGCTTG+TGG - chr1_4:55919784-55919803 None:intergenic 60.0%
GATGTGTGGCCACAGTAGCC+GGG + chr1_4:55920772-55920791 Msa0171250:intron 60.0%
ATGTGTGGCCACAGTAGCCG+GGG + chr1_4:55920773-55920792 Msa0171250:intron 60.0%
GCAATCGAGACGGCGGTTGG+TGG - chr1_4:55911268-55911287 None:intergenic 65.0%
GAGAGGGAGGTGGTCGGAGA+TGG - chr1_4:55911319-55911338 None:intergenic 65.0%
TCGTGGTACGGCGGAGAAGC+AGG + chr1_4:55911558-55911577 Msa0171250:CDS 65.0%
GCGACCAGGGCAGCATGCAT+CGG - chr1_4:55914580-55914599 None:intergenic 65.0%
GAGCCACCCAACCCCCTATC+AGG - chr1_4:55915211-55915230 None:intergenic 65.0%
TTCTGCTGGGCAGTGGTGGC+TGG + chr1_4:55915880-55915899 Msa0171250:CDS 65.0%
GAGGCGGCAGCAGTTCCATG+TGG + chr1_4:55916349-55916368 Msa0171250:CDS 65.0%
AACGGCTCCAGGCACGTCCA+AGG + chr1_4:55921245-55921264 Msa0171250:CDS 65.0%
ATCGCCAAAGGCGGCGGTGC+CGG + chr1_4:55911348-55911367 Msa0171250:CDS 70.0%
GATTCCGGCACCGCCGCCTT+TGG - chr1_4:55911355-55911374 None:intergenic 70.0%
GGGAAGGATGTACGGCGGCG+CGG - chr1_4:55911392-55911411 None:intergenic 70.0%
TGTACGGCGGCGCGGAGAGG+AGG - chr1_4:55911384-55911403 None:intergenic 75.0%
GGATGTACGGCGGCGCGGAG+AGG - chr1_4:55911387-55911406 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 55910990 55921984 55910990 ID=Msa0171250;Name=Msa0171250
chr1_4 mRNA 55910990 55921984 55910990 ID=Msa0171250-mRNA-1;Parent=Msa0171250;Name=Msa0171250-mRNA-1;_AED=0.09;_eAED=0.09;_QI=136|0.83|0.84|0.92|0.91|0.84|13|480|1097
chr1_4 exon 55910990 55911807 55910990 ID=Msa0171250-mRNA-1:exon:16792;Parent=Msa0171250-mRNA-1
chr1_4 exon 55912779 55913031 55912779 ID=Msa0171250-mRNA-1:exon:16793;Parent=Msa0171250-mRNA-1
chr1_4 exon 55914770 55915562 55914770 ID=Msa0171250-mRNA-1:exon:16794;Parent=Msa0171250-mRNA-1
chr1_4 exon 55915863 55915987 55915863 ID=Msa0171250-mRNA-1:exon:16795;Parent=Msa0171250-mRNA-1
chr1_4 exon 55916312 55916435 55916312 ID=Msa0171250-mRNA-1:exon:16796;Parent=Msa0171250-mRNA-1
chr1_4 exon 55916524 55916541 55916524 ID=Msa0171250-mRNA-1:exon:16797;Parent=Msa0171250-mRNA-1
chr1_4 exon 55917033 55917198 55917033 ID=Msa0171250-mRNA-1:exon:16798;Parent=Msa0171250-mRNA-1
chr1_4 exon 55917300 55917340 55917300 ID=Msa0171250-mRNA-1:exon:16799;Parent=Msa0171250-mRNA-1
chr1_4 exon 55917433 55917685 55917433 ID=Msa0171250-mRNA-1:exon:16800;Parent=Msa0171250-mRNA-1
chr1_4 exon 55918261 55918384 55918261 ID=Msa0171250-mRNA-1:exon:16801;Parent=Msa0171250-mRNA-1
chr1_4 exon 55919748 55920108 55919748 ID=Msa0171250-mRNA-1:exon:16802;Parent=Msa0171250-mRNA-1
chr1_4 exon 55920999 55921365 55920999 ID=Msa0171250-mRNA-1:exon:16803;Parent=Msa0171250-mRNA-1
chr1_4 exon 55921518 55921984 55921518 ID=Msa0171250-mRNA-1:exon:16804;Parent=Msa0171250-mRNA-1
chr1_4 five_prime_UTR 55910990 55911125 55910990 ID=Msa0171250-mRNA-1:five_prime_utr;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55911126 55911807 55911126 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55912779 55913031 55912779 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55914770 55915562 55914770 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55915863 55915987 55915863 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55916312 55916435 55916312 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55916524 55916541 55916524 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55917033 55917198 55917033 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55917300 55917340 55917300 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55917433 55917685 55917433 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55918261 55918384 55918261 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55919748 55920108 55919748 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 CDS 55920999 55921352 55920999 ID=Msa0171250-mRNA-1:cds;Parent=Msa0171250-mRNA-1
chr1_4 three_prime_UTR 55921353 55921365 55921353 ID=Msa0171250-mRNA-1:three_prime_utr;Parent=Msa0171250-mRNA-1
chr1_4 three_prime_UTR 55921518 55921984 55921518 ID=Msa0171250-mRNA-1:three_prime_utr;Parent=Msa0171250-mRNA-1
Gene Sequence

>Msa0171250

ATGGATCTTCACCAAAACGACGCTTCTTCATCTTTTCCACTGTCGTCCACTCCTCAACAACGCACTTTCTTATATTCACGTTCCTCCTCTTCTTCTTCCAACGACAACGACGACGTTTCATCCTCCAATTCTATTCATTCCACCAACCGCCGTCTCGATTGCATGCTCCAATTCCTCGAACGCAAACTCACCATCTCCGACCACCTCCCTCTCCCTGAATTCATCGCCAAAGGCGGCGGTGCCGGAATCTTCAAACCTCCTCTCCGCGCCGCCGTACATCCTTCCCGTCCTCCTTCTCTCGAATTACGTCCTCATCCCTTACGCGAGACTCAGATTGGACGGTTTTTACGCAACATTGTTGCGACCGAGTCGCAATTATGGTCTGCGACTGAACGTGGACTACGATTCTGGAATTTTAAAGATCTATACGCGTCGTGGTACGGCGGAGAAGCAGGTGTTGTGAGGAGTGGTGATGAAGAGAGTGCGCCATTTCGTGAATCGGTTTGGACTTCTCCGGCGATTTGTTTGGTTGCGGATGAAGGGAATAGGTTGGTGTGGAGTGGACATAGAGATGGGAAGATTCGCTGTTGGCAAATGGATTCTCTGAATTCTGATTTTAACGAAAAATTATCTTGGCAAGCTCATCGTGGACCTGTTCTTTCAATCACAATCACTTCTTATGGGGATCTGTGGTCGGGTTCAGAAGGAGGGGTTATAAAAATATGGCCTTGGGAGGCTGTTGAAAAATCTATTCATCTGACAGAGGAGGAAAGGCACAAGGCTGTCATATTCATCGAGAGATCCTACGTTGACTTGAGGAGCCAGCTATCTACAAATGGCTACAATAACATGCTAACTTCAGATATAAAGTACTTAGTATCGGATAATTCAAAGGCAAAGGTGTGGAGTGCTGGGTATTTTTCATATGCTTTATGGGATGCTCGTACAAGAGAGTTGTTGAAAGTTTTCAATTCAGATGGCCAAATGGAGAATCGATCAGACTTGCCTTCAATGCAAGACTTTCCGGCCGACCTTGTTTCAAGTTCTAGGAAAGACAGAAACCAAAGTTCCATTGGGTTCTTTCAGCGCTCACGTAATGCCATAATGGGGGCAGCCGATGCTGTTCGCCGAGTTGCAGCAAAGGGAGCCTTTGGAGATGAGAATCGGAGAACTGAAGCACTTGTAGTAACAATTGATGGAATGATTTGGACAGGATATTCAAGTGGCTTGCTGGTGCAATGGGATGGAAATGGCAATCGCATACAGGATTTTATTTACCACCCATTTGCTGTTCAATGTTTTTGTACTTATGGAATGCAAATTTGGGTAGGTTATGTGTCTGGCATTGTCCAGGTATTGGACCTGAAGGGTAACCTGATAGGGGGTTGGGTGGCTCATAGCTGTCCAGTTGTAAAAATGACAGTTGGAGTTGGCTATGTATTCACATTGGCTAACCACGGTGGCATACGAGGATGGAACATCACCTCTCCAGGACCTCTTGATAGCATTTTGTGTTCAGAATTGGGCGGCAAAGAATTTTTATATACTAAAATAGAAAACATAAAGATCTTGAGTGGCACTTGGAATGTTGGACAAGGAAAAGCATCTCAAGATTCCCTTACTTCATGGCTAGGTTCTGTGGCCTCAGATGTTGGCCTTGTTGTTGTTGGGTTGCAAGAGGTTGAAATGGGCGCTGGATTTCTTGCAATGTCTGCAGCTAAAGAAACTGTAGGACTGGAGGGTAGTTCTGCTGGGCAGTGGTGGCTGGATATGATAGACAAAACACTGGATGAAGGTTCAACATTTAAACGAATTGGATCCAGGCAACTTGCAGGCTTGGTCATTGCTGTGTGGGTTAAAACAAACATTAGACTTCATGTTGGGGATGTTGAGGCGGCAGCAGTTCCATGTGGCTTTGGACGTGCTATTGGAAATAAGGTAGGATATGTTTTCTCTGCTGCTATGCTTTGCAAGCTGGATTATGAGAATTCTAAGGGAGCTGTTGCTTTGAGGGTTAGAGTGTATGATCGGATTATGTGCTTTGTTAATTGTCACTTTGCTGCACATTTAGATGCAGTTGGTCGTCGCAATTCAGATTTTGATTATGTATACCGAACAATGTCCTTTAGTCGACCAACAAACCTCTTAAATACAACACCTGCTGGAACTTCAGCTTCTATTCCAATGTTTCGTGGTACAAATCCTGCAGAAGGGATACCTGAGTTATCTGAGGCAGACATGATTGTATTTCTTGGTGATTTGAACTATCGTCTTGATGACATTTCGTATGATGAAGCAAGAGATTTTGTATCTCAAAGATGCTTTGATTGGCTTAGAGAAAGGGATCAGCTTCGAGCTGAAATGGAAGCTGGGAATGCCTTCCAAGGAATGCGTGAAGCAGTAATAACATTTCCTCCCACATACAAGTTTGAACGACACCAAGCTGGTTTGGCAGGGTATGACTCTGGTGAAAAGAAACGCATCCCTGCCTGGTGTGACAGAATTTTGTATCGTGATAGTCGCTCTTCTTTGGTTGCTGAATGCAATTTGGAGTACCCTGTTGTCTCTTCAGTATTGCAGTACGAAGCCTGCATGGATGTCACAGATAGTGACCACAAGCCTGTGCGCTGCATCTTTTCTACAGATATTGCTCGAGTAGATGAACCAATACGGAGACAGGAGTTTGGAGAAATTCTCGAGTCAAATGAGAAAATAAAATGTCTTCTGAAAGAATTGTACAAGATTCCTGAAACTATCATAAGTACAAACAACATAATTCTTCAAAACCAGGACACATTAATTTTGCGTATTACTAATAAAAGTACAGAAGACAATGCTTTGTTCGAAATAATTTGCGAAGGGCAGACTACTGTACTGGAGGATCAGAAGGCAACAAACCATCAGTTGAGAGGTTCTTTTGGATTGCCTAGGTGGCTTGAGGTAAGTCCTGCAACTGGTATTATAAGACCAGATCAGATTATTGAGGTATCAGTGCATCATGAGGAATTTCAGACTCAGGAAGAGTTTGTTGATGGTGTTGTACAAAACTCTTGGTGTGAAGACTCCAGAGACAAGGAAGCAATTTTGATTGTTAAGGTGCATGGGAATTACGCTATTCAGACAAGAAATCACCGAGTGCGTGTTCACCACTGTTATTCATCCAAGAAAAACCAATTGACTCAAGCAAACGGCTCCAGGCACGTCCAAGGAAGTGTACTTCACCGATCTGATTTTCAACGTTTGAGCAATTCATTTGATGTGGTTGACCAGCTGCATAAATTGCATAGCCCTTGA
Protein sequence

>Msa0171250

MDLHQNDASSSFPLSSTPQQRTFLYSRSSSSSSNDNDDVSSSNSIHSTNRRLDCMLQFLERKLTISDHLPLPEFIAKGGGAGIFKPPLRAAVHPSRPPSLELRPHPLRETQIGRFLRNIVATESQLWSATERGLRFWNFKDLYASWYGGEAGVVRSGDEESAPFRESVWTSPAICLVADEGNRLVWSGHRDGKIRCWQMDSLNSDFNEKLSWQAHRGPVLSITITSYGDLWSGSEGGVIKIWPWEAVEKSIHLTEEERHKAVIFIERSYVDLRSQLSTNGYNNMLTSDIKYLVSDNSKAKVWSAGYFSYALWDARTRELLKVFNSDGQMENRSDLPSMQDFPADLVSSSRKDRNQSSIGFFQRSRNAIMGAADAVRRVAAKGAFGDENRRTEALVVTIDGMIWTGYSSGLLVQWDGNGNRIQDFIYHPFAVQCFCTYGMQIWVGYVSGIVQVLDLKGNLIGGWVAHSCPVVKMTVGVGYVFTLANHGGIRGWNITSPGPLDSILCSELGGKEFLYTKIENIKILSGTWNVGQGKASQDSLTSWLGSVASDVGLVVVGLQEVEMGAGFLAMSAAKETVGLEGSSAGQWWLDMIDKTLDEGSTFKRIGSRQLAGLVIAVWVKTNIRLHVGDVEAAAVPCGFGRAIGNKVGYVFSAAMLCKLDYENSKGAVALRVRVYDRIMCFVNCHFAAHLDAVGRRNSDFDYVYRTMSFSRPTNLLNTTPAGTSASIPMFRGTNPAEGIPELSEADMIVFLGDLNYRLDDISYDEARDFVSQRCFDWLRERDQLRAEMEAGNAFQGMREAVITFPPTYKFERHQAGLAGYDSGEKKRIPAWCDRILYRDSRSSLVAECNLEYPVVSSVLQYEACMDVTDSDHKPVRCIFSTDIARVDEPIRRQEFGEILESNEKIKCLLKELYKIPETIISTNNIILQNQDTLILRITNKSTEDNALFEIICEGQTTVLEDQKATNHQLRGSFGLPRWLEVSPATGIIRPDQIIEVSVHHEEFQTQEEFVDGVVQNSWCEDSRDKEAILIVKVHGNYAIQTRNHRVRVHHCYSSKKNQLTQANGSRHVQGSVLHRSDFQRLSNSFDVVDQLHKLHSP*