AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0078610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0078610 MtrunA17_Chr1g0189231 95.652 1104 24 4 1 1100 1 1084 0.0 2172
Msa0078610 MtrunA17_Chr6g0488541 57.590 1087 383 11 34 1069 69 1128 0.0 1282
Msa0078610 MtrunA17_Chr7g0263111 27.218 496 225 18 465 937 61 443 4.99e-39 152
Msa0078610 MtrunA17_Chr8g0375751 25.799 438 223 15 525 938 61 420 1.38e-31 129
Msa0078610 MtrunA17_Chr4g0054951 31.724 290 138 8 605 890 310 543 2.20e-30 127
Msa0078610 MtrunA17_Chr4g0054941 31.034 290 140 8 605 890 310 543 1.33e-29 125
Msa0078610 MtrunA17_Chr6g0479511 24.279 416 210 14 509 886 34 382 3.57e-29 121
Msa0078610 MtrunA17_Chr8g0382571 29.167 312 159 10 582 886 189 445 3.76e-29 122
Msa0078610 MtrunA17_Chr6g0452181 25.275 455 216 14 524 934 56 430 4.91e-29 122
Msa0078610 MtrunA17_Chr1g0154491 28.883 367 171 12 518 879 45 326 6.06e-29 119
Msa0078610 MtrunA17_Chr1g0201271 27.778 288 145 9 603 886 369 597 7.86e-29 123
Msa0078610 MtrunA17_Chr5g0400311 29.966 297 148 9 598 890 360 600 1.27e-28 122
Msa0078610 MtrunA17_Chr6g0466801 28.819 288 142 9 603 886 367 595 3.59e-28 121
Msa0078610 MtrunA17_Chr1g0165011 24.524 420 198 14 518 886 58 409 2.21e-27 117
Msa0078610 MtrunA17_Chr5g0394901 29.339 242 129 5 603 840 352 555 6.91e-26 114
Msa0078610 MtrunA17_Chr1g0205121 30.579 242 126 5 603 840 313 516 8.33e-26 114
Msa0078610 MtrunA17_Chr1g0185281 30.328 244 128 5 601 840 284 489 1.36e-25 112
Msa0078610 MtrunA17_Chr7g0260081 30.375 293 145 9 603 890 286 524 5.15e-25 111
Msa0078610 MtrunA17_Chr8g0355021 24.913 289 155 8 605 886 227 460 4.64e-19 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0078610 AT1G65580.1 62.013 1103 361 11 27 1100 28 1101 0.0 1420
Msa0078610 AT2G43900.1 60.098 1020 364 9 70 1069 113 1109 0.0 1301
Msa0078610 AT2G43900.2 58.365 1052 363 10 70 1069 113 1141 0.0 1288
Msa0078610 AT1G05630.2 59.021 1042 379 10 66 1083 101 1118 0.0 1279
Msa0078610 AT1G05630.1 57.156 1076 379 11 66 1083 101 1152 0.0 1259
Msa0078610 AT2G31830.2 55.048 1050 422 10 74 1098 120 1144 0.0 1188
Msa0078610 AT2G31830.1 55.556 1035 410 10 74 1083 120 1129 0.0 1185
Msa0078610 AT1G65580.2 64.830 853 270 4 259 1100 2 835 0.0 1175
Msa0078610 AT1G05630.3 60.658 821 277 9 66 864 101 897 0.0 1032
Msa0078610 AT2G31830.3 57.654 810 297 9 74 862 120 904 0.0 949
Msa0078610 AT2G01900.1 27.273 418 202 14 519 903 53 401 1.47e-32 132
Msa0078610 AT2G01900.3 27.273 418 202 14 519 903 61 409 1.60e-32 132
Msa0078610 AT4G18010.1 32.215 298 142 11 597 890 381 622 1.94e-31 132
Msa0078610 AT3G63240.2 31.699 306 151 8 585 886 259 510 2.25e-30 127
Msa0078610 AT3G63240.1 31.699 306 151 8 585 886 259 510 2.25e-30 127
Msa0078610 AT1G71710.2 29.371 286 140 7 605 886 399 626 7.52e-30 127
Msa0078610 AT1G71710.1 29.268 287 141 7 604 886 407 635 8.50e-30 127
Msa0078610 AT2G01900.2 26.316 418 197 15 519 903 53 392 4.96e-28 118
Msa0078610 AT2G37440.1 26.651 424 190 18 523 897 82 433 4.03e-27 117
Msa0078610 AT2G37440.3 26.651 424 190 18 523 897 82 433 4.03e-27 117
Msa0078610 AT1G34120.5 26.667 285 153 6 604 886 181 411 6.48e-27 115
Msa0078610 AT4G18010.2 33.058 242 117 8 597 834 381 581 1.24e-26 116
Msa0078610 AT2G32010.2 29.758 289 144 9 603 886 324 558 2.20e-26 116
Msa0078610 AT2G32010.1 29.758 289 144 9 603 886 324 558 2.20e-26 116
Msa0078610 AT2G32010.4 29.758 289 144 9 603 886 324 558 2.20e-26 116
Msa0078610 AT2G32010.3 29.758 289 144 9 603 886 324 558 2.20e-26 116
Msa0078610 AT1G05470.2 27.397 292 155 7 608 895 352 590 2.29e-26 116
Msa0078610 AT1G05470.1 27.397 292 155 7 608 895 352 590 2.29e-26 116
Msa0078610 AT1G47510.4 30.047 213 107 4 668 880 93 263 3.81e-26 109
Msa0078610 AT1G34120.1 26.667 285 153 6 604 886 332 562 4.66e-26 115
Msa0078610 AT1G47510.1 26.912 353 167 11 530 879 60 324 4.76e-26 111
Msa0078610 AT1G34120.2 26.667 285 153 6 604 886 336 566 4.86e-26 115
Msa0078610 AT5G65090.2 29.066 289 144 10 604 886 198 431 7.04e-26 113
Msa0078610 AT5G65090.3 29.066 289 144 10 604 886 261 494 1.16e-25 113
Msa0078610 AT5G65090.1 29.066 289 144 10 604 886 261 494 1.16e-25 113
Msa0078610 AT5G04980.4 28.014 282 149 7 608 886 160 390 1.19e-25 111
Msa0078610 AT1G34120.3 27.018 285 151 7 604 886 336 565 1.68e-25 113
Msa0078610 AT5G04980.2 28.723 282 147 8 608 886 224 454 1.95e-25 111
Msa0078610 AT5G04980.1 28.723 282 147 8 608 886 195 425 2.12e-25 111
Msa0078610 AT5G04980.3 28.723 282 147 8 608 886 195 425 2.12e-25 111
Msa0078610 AT2G37440.2 25.721 416 201 16 526 897 1 352 2.43e-25 110
Msa0078610 AT1G47510.2 31.953 169 101 3 713 879 105 261 2.34e-17 84.0

Find 325 sgRNAs with CRISPR-Local

Find 757 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACTTATGGAATGCAAATT+TGG 0.128312 1_2:+56266712 Msa0078610:CDS
GTTGCTTCTAACAAATATTT+TGG 0.129585 1_2:+56272716 Msa0078610:three_prime_UTR
CCGCCTTTGGCGATGAATTC+AGG 0.183076 1_2:-56262992 None:intergenic
TATGGTAGATAGACATTTAC+AGG 0.212201 1_2:-56272601 None:intergenic
CCGACCTTGTTTCAAGTTCT+AGG 0.218359 1_2:+56266436 Msa0078610:CDS
GCCTTCAATGCAAGACTTTC+CGG 0.218429 1_2:+56266413 Msa0078610:CDS
CATCAGTTGAGAGGTTCTTT+TGG 0.255502 1_2:+56271040 Msa0078610:CDS
AAATAGTCACTCACCTTAAT+TGG 0.255905 1_2:-56272327 None:intergenic
TTTGTACTTATGATAGTTTC+AGG 0.256838 1_2:-56270887 None:intergenic
GGAAGCTGGGAATGCCTTCC+AGG 0.263975 1_2:+56269167 Msa0078610:CDS
TTTGGTTGCTGAATGCAATT+TGG 0.264029 1_2:+56269859 Msa0078610:CDS
TCAATCACAATCACTTCTTA+TGG 0.266530 1_2:+56263439 Msa0078610:CDS
GGAAAATCCAGTGGCATGTT+AGG 0.267644 1_2:+56272651 Msa0078610:three_prime_UTR
CGCTCACGTAATGCCATAAT+GGG 0.269882 1_2:+56266495 Msa0078610:CDS
CTGAACGTGGACTCCGGTTC+TGG 0.271969 1_2:+56263167 Msa0078610:CDS
TTCCGCGCGTTTCGATCTAA+TGG 0.282825 1_2:+56262751 Msa0078610:exon
GGTTCAACATTTAAACGAAT+TGG 0.286201 1_2:+56267503 Msa0078610:CDS
GAAGATTCGCTGTTGGTATA+TGG 0.288190 1_2:+56263354 Msa0078610:CDS
ATTCAATTCAGAACTGAAAA+TGG 0.292913 1_2:-56262695 None:intergenic
TGGACGTGCTATTGGAAATA+AGG 0.293258 1_2:+56267949 Msa0078610:CDS
CCAGGGAGCTGTTGCTTTGA+GGG 0.296075 1_2:+56268602 Msa0078610:intron
CTCAAGATTCCCTTACTTCA+TGG 0.304893 1_2:+56267015 Msa0078610:CDS
TTCTGCTGGGCAGTGGTGGC+TGG 0.316135 1_2:+56267454 Msa0078610:CDS
TGAGTTTACGGTCGAGGAAT+TGG 0.319211 1_2:-56262946 None:intergenic
TTGCGACCGAGTCGCAATTA+TGG 0.320678 1_2:+56263137 Msa0078610:CDS
GGACTGGAGGGTAGTTCTGC+TGG 0.328570 1_2:+56267440 Msa0078610:CDS
AGCCCTTGAAGCACCAATTA+AGG 0.328669 1_2:+56272314 Msa0078610:exon
AGGTTAAATTGAGCTCCTTT+TGG 0.341931 1_2:-56272581 None:intergenic
TATCTCAAAGATGCTTTGAT+TGG 0.343370 1_2:+56269112 Msa0078610:CDS
CACCGTTTCGTGAATCGGTT+TGG 0.344154 1_2:+56263263 Msa0078610:CDS
GATTCCGGCACCGCCGCCTT+TGG 0.348253 1_2:-56263005 None:intergenic
TGCTGCTATGCTTTGCAAGC+TGG 0.348833 1_2:+56267988 Msa0078610:CDS
GCGCTCACGTAATGCCATAA+TGG 0.349932 1_2:+56266494 Msa0078610:CDS
GATGTTGGCCTTGTTGTTGT+TGG 0.354509 1_2:+56267056 Msa0078610:CDS
TCGTGATAGTCGCTCTTCTT+TGG 0.354513 1_2:+56269841 Msa0078610:CDS
TTCCCTTTCAATTGTAGCTT+CGG 0.354787 1_2:-56272632 None:intergenic
GACTTCGCCGGCGATTTGTT+TGG 0.355477 1_2:+56263285 Msa0078610:CDS
TGTGGCTTTGGACGTGCTAT+TGG 0.356280 1_2:+56267941 Msa0078610:CDS
CAAAATTGCTTCCTTGTCTC+TGG 0.356746 1_2:-56272093 None:intergenic
CCCCTATCAGGTTACCCTTC+AGG 0.357341 1_2:-56266770 None:intergenic
ACCAGGGAGCTGTTGCTTTG+AGG 0.360681 1_2:+56268601 Msa0078610:intron
GCAGCAGTTCCATGTGGCTT+TGG 0.360733 1_2:+56267929 Msa0078610:CDS
AGATAATCTTTCATTAAAAT+CGG 0.362721 1_2:-56263389 None:intergenic
ATTGGATCCAGGCAACTTGC+AGG 0.363077 1_2:+56267521 Msa0078610:CDS
GAGTGCACCGTTTCGTGAAT+CGG 0.364631 1_2:+56263258 Msa0078610:CDS
GTAGCTTCGGCTGTTTAGTA+TGG 0.368059 1_2:-56272619 None:intergenic
AAGGCAAAGGTGTGGAGTGC+TGG 0.376191 1_2:+56264571 Msa0078610:CDS
AGCCGTTTGGTTGAGTCAAT+TGG 0.377498 1_2:-56272199 None:intergenic
TAACAATTGATGGAATGATT+TGG 0.380093 1_2:+56266595 Msa0078610:CDS
GTTGTATTTAAGAGGTTTGT+TGG 0.380263 1_2:-56268744 None:intergenic
GCAGACATGATTGTATTTCT+TGG 0.380609 1_2:+56269036 Msa0078610:CDS
CCAATACGGAGACAGGAGTT+TGG 0.381547 1_2:+56270806 Msa0078610:CDS
GGATCAGCTTCGAGCTGAAA+TGG 0.382975 1_2:+56269146 Msa0078610:CDS
GGTCGGAGATATTGAGTTTA+CGG 0.386882 1_2:-56262958 None:intergenic
GAAACGCGCGGAAAGAATAT+AGG 0.386912 1_2:-56262741 None:intergenic
CAAACATTAGACTTCATGTT+GGG 0.388130 1_2:+56267894 Msa0078610:CDS
TACTTATGGAATGCAAATTT+GGG 0.388626 1_2:+56266713 Msa0078610:CDS
GTAGGATTATGAGAATTCTA+AGG 0.389942 1_2:+56268094 Msa0078610:intron
ATCCAGGCAACTTGCAGGCT+TGG 0.392811 1_2:+56267526 Msa0078610:CDS
GAGAGGAGGTTTGAAGATTC+CGG 0.397056 1_2:-56263020 None:intergenic
CTAGCATCTCATTATTTGCT+TGG 0.399889 1_2:+56272752 Msa0078610:three_prime_UTR
TCACCTTAATTGGTGCTTCA+AGG 0.400676 1_2:-56272317 None:intergenic
GTTGCAGCAAAGGGAGCCTT+TGG 0.401006 1_2:+56266540 Msa0078610:CDS
GCACTTGTAGTAACAATTGA+TGG 0.403616 1_2:+56266585 Msa0078610:CDS
GTTGGTGGAATGAATAGAAT+TGG 0.404222 1_2:-56262903 None:intergenic
AAATGAAGGTCACATATTAT+AGG 0.404304 1_2:-56272811 None:intergenic
TACCAGGTGTTGTATTTAAG+AGG 0.404326 1_2:-56268752 None:intergenic
CCAAACTCCTGTCTCCGTAT+TGG 0.404332 1_2:-56270806 None:intergenic
AGGATATTCAAGTGGCTTGC+TGG 0.410437 1_2:+56266620 Msa0078610:CDS
GACCTGAAGGGTAACCTGAT+AGG 0.415830 1_2:+56266768 Msa0078610:CDS
TGAACGACACCAAGCTGGTT+TGG 0.418007 1_2:+56269233 Msa0078610:CDS
GATCTTTAAAATTCCAGAAC+CGG 0.418272 1_2:-56263180 None:intergenic
AGTCTGATCGATTCTCCATT+TGG 0.418680 1_2:-56266389 None:intergenic
AAATGGAGAGACCGAGCGTT+TGG 0.419384 1_2:-56262678 None:intergenic
CGACACCAAGCTGGTTTGGC+AGG 0.421696 1_2:+56269237 Msa0078610:CDS
CATTTAAACGAATTGGATCC+AGG 0.422554 1_2:+56267510 Msa0078610:CDS
GAAAGAACCCAATGGAACTT+TGG 0.422613 1_2:-56266470 None:intergenic
GGTCTTATAATACCAGTTGC+AGG 0.424170 1_2:-56271975 None:intergenic
ATGTATATTGTATTAAATGA+AGG 0.425127 1_2:-56272825 None:intergenic
CGCCTTTGGCGATGAATTCA+GGG 0.428684 1_2:-56262991 None:intergenic
ATCGCCAAAGGCGGCGGTGC+CGG 0.430167 1_2:+56263001 Msa0078610:CDS
AAGATGAAGAAGCGTCGTTT+TGG 0.432240 1_2:-56262784 None:intergenic
CAGAACCTAGCCATGAAGTA+AGG 0.432253 1_2:-56267025 None:intergenic
TGTAGCCATTTGTAGATAGC+TGG 0.435365 1_2:-56264501 None:intergenic
TGGTTGCGGATGAAGGGAAT+AGG 0.437115 1_2:+56263305 Msa0078610:CDS
GACCAAGCCTGCAAGTTGCC+TGG 0.438966 1_2:-56267528 None:intergenic
CCCTTACGCGAGACTCAGAT+TGG 0.440816 1_2:+56263094 Msa0078610:CDS
GCTTTGATTGGCTTAGAGAA+AGG 0.443441 1_2:+56269124 Msa0078610:CDS
AAACGCGCGGAAAGAATATA+GGG 0.445260 1_2:-56262740 None:intergenic
ATTTGTTTGGTTGCGGATGA+AGG 0.446369 1_2:+56263298 Msa0078610:CDS
ATGTTGGCCTTGTTGTTGTT+GGG 0.447214 1_2:+56267057 Msa0078610:CDS
CTTCGAGCTGAAATGGAAGC+TGG 0.447564 1_2:+56269153 Msa0078610:CDS
CTTTGATTGGCTTAGAGAAA+GGG 0.447830 1_2:+56269125 Msa0078610:CDS
GTCTGGCATTGTCCAGGTAT+TGG 0.451126 1_2:+56266746 Msa0078610:CDS
ACTCAGGAAGAGTTTGTTGA+TGG 0.451219 1_2:+56272041 Msa0078610:CDS
GCTTCTATTCCAATGTTTCG+TGG 0.453642 1_2:+56268884 Msa0078610:CDS
GACTGGAGGGTAGTTCTGCT+GGG 0.455784 1_2:+56267441 Msa0078610:CDS
GACAGAAACCAAAGTTCCAT+TGG 0.458452 1_2:+56266462 Msa0078610:CDS
ACCTGAAGGGTAACCTGATA+GGG 0.459789 1_2:+56266769 Msa0078610:CDS
GGCTATGCAATTTATGCAGC+TGG 0.463431 1_2:-56272295 None:intergenic
TACACTTCCTTGGACGTGCC+TGG 0.464196 1_2:-56272222 None:intergenic
GGTTCTGTGGCCTCAGATGT+TGG 0.464990 1_2:+56267041 Msa0078610:CDS
GTGATTGTGATTGAAAGAAC+AGG 0.470082 1_2:-56263430 None:intergenic
TGCAATACTGAAGAGACAAC+AGG 0.470288 1_2:-56269887 None:intergenic
CTGAGTCTCGCGTAAGGGAT+GGG 0.470537 1_2:-56263089 None:intergenic
TCCAATCTGAGTCTCGCGTA+AGG 0.471792 1_2:-56263095 None:intergenic
ATTTGGGTAGGTTATGTGTC+TGG 0.472737 1_2:+56266729 Msa0078610:CDS
GAGGTTTGTTGGTCGACTAA+AGG 0.473639 1_2:-56268733 None:intergenic
GATACCTCAATAATCTGATC+TGG 0.475261 1_2:-56271996 None:intergenic
TGGGTTGCAAGAGGTTGAAA+TGG 0.476153 1_2:+56267076 Msa0078610:CDS
GCCGGAAAGTCTTGCATTGA+AGG 0.477110 1_2:-56266414 None:intergenic
GTAGTTCTGCTGGGCAGTGG+TGG 0.477422 1_2:+56267450 Msa0078610:CDS
TGGACGTGCCTGGAGCCGTT+TGG 0.477930 1_2:-56272212 None:intergenic
ATCGGTGAAGTACACTTCCT+TGG 0.480038 1_2:-56272232 None:intergenic
AGGGTAGTTCTGCTGGGCAG+TGG 0.482882 1_2:+56267447 Msa0078610:CDS
TACGCAAAATTAATGTGTCC+TGG 0.486489 1_2:-56270928 None:intergenic
TGAAACGTCGTCGTTGTCGT+TGG 0.487718 1_2:-56262876 None:intergenic
GATTCCCTTACTTCATGGCT+AGG 0.488496 1_2:+56267020 Msa0078610:CDS
TTACTGCTTCACGCATTCCC+TGG 0.489810 1_2:-56269185 None:intergenic
AAGTGGCTTGCTGGTGCAAT+GGG 0.491693 1_2:+56266629 Msa0078610:CDS
CACCTTAATTGGTGCTTCAA+GGG 0.491787 1_2:-56272316 None:intergenic
TGATCTAGGGGATCTGTGGT+CGG 0.492661 1_2:+56264354 Msa0078610:intron
TATAGGAAGTCATTAACAAA+TGG 0.494459 1_2:-56272794 None:intergenic
CAAGAGGTTGAAATGGGCGC+TGG 0.495167 1_2:+56267083 Msa0078610:CDS
TTGAGTGGCACTTGGAATGT+TGG 0.495567 1_2:+56266978 Msa0078610:CDS
ACAGAAACCAAAGTTCCATT+GGG 0.496226 1_2:+56266463 Msa0078610:CDS
TGATACCATTTAATTCCAAA+AGG 0.496544 1_2:+56272566 Msa0078610:three_prime_UTR
GATCTAGGGGATCTGTGGTC+GGG 0.497803 1_2:+56264355 Msa0078610:intron
TACTTCATGGCTAGGTTCTG+TGG 0.497882 1_2:+56267028 Msa0078610:CDS
GAAAATCCAGTGGCATGTTA+GGG 0.499054 1_2:+56272652 Msa0078610:three_prime_UTR
CTGTGGTCGGGTTCAGAAGG+AGG 0.499297 1_2:+56264367 Msa0078610:CDS
TACCCTTCAGGTCCAATACC+TGG 0.500021 1_2:-56266758 None:intergenic
AGGAGGACGGGAAGGATGTA+CGG 0.500575 1_2:-56263050 None:intergenic
TTTCAATTCAGATGGCCAAA+TGG 0.500882 1_2:+56266374 Msa0078610:CDS
AGATGAACCAATACGGAGAC+AGG 0.503011 1_2:+56270799 Msa0078610:CDS
CGAAGGGCAGACTACTGTAC+TGG 0.503492 1_2:+56270997 Msa0078610:CDS
TGACTCAACCAAACGGCTCC+AGG 0.504665 1_2:+56272204 Msa0078610:CDS
GTCGACTAAAGGACATTGTT+CGG 0.507124 1_2:-56268722 None:intergenic
TTATGTGTCTGGCATTGTCC+AGG 0.507537 1_2:+56266740 Msa0078610:CDS
AAAAGAAACGCATCCCTGCC+TGG 0.507732 1_2:+56269801 Msa0078610:CDS
GCCGGCGATTTGTTTGGTTG+CGG 0.507926 1_2:+56263291 Msa0078610:CDS
CTCAAGCATATAGGTAGGAC+TGG 0.508609 1_2:+56267424 Msa0078610:intron
ATTGATGGAATGATTTGGAC+AGG 0.509230 1_2:+56266600 Msa0078610:CDS
CAAATGAATTGCTCAAACGT+TGG 0.509612 1_2:-56272262 None:intergenic
GTCCAAACCGATTCACGAAA+CGG 0.513271 1_2:-56263265 None:intergenic
ATTCAGGTAAGTCCTGCAAC+TGG 0.514095 1_2:+56271963 Msa0078610:intron
GATCTGTATGCGTCGTGGTA+CGG 0.515404 1_2:+56263199 Msa0078610:CDS
TGGATTGCCTAGGTGGCTTG+AGG 0.516378 1_2:+56271060 Msa0078610:CDS
GTGTCGTTCAAACTTGTATG+TGG 0.518152 1_2:-56269220 None:intergenic
GCTGCACATTTAGATGCAGT+TGG 0.519575 1_2:+56268669 Msa0078610:CDS
TTGCGACTCGGTCGCAACAA+TGG 0.519963 1_2:-56263131 None:intergenic
AGGCAAAGGTGTGGAGTGCT+GGG 0.521311 1_2:+56264572 Msa0078610:CDS
GCAATCGAGACGGCGGTTGG+TGG 0.521437 1_2:-56262918 None:intergenic
AGGAGCCAGCTATCTACAAA+TGG 0.521693 1_2:+56264496 Msa0078610:CDS
GAATTCATCGCCAAAGGCGG+CGG 0.522449 1_2:+56262995 Msa0078610:CDS
GTTCGCCGAGTTGCAGCAAA+GGG 0.522989 1_2:+56266531 Msa0078610:CDS
TGGAAATGGCAATCGCATAC+AGG 0.523350 1_2:+56266653 Msa0078610:CDS
AGACCGAGCGTTTGGACAGA+AGG 0.523471 1_2:-56262670 None:intergenic
TGTGGTCGGGTTCAGAAGGA+GGG 0.527175 1_2:+56264368 Msa0078610:CDS
GGATGGAACATCACCTCTCC+AGG 0.527747 1_2:+56266879 Msa0078610:CDS
GAGCCTTTGGAGATGAGAAT+CGG 0.527887 1_2:+56266553 Msa0078610:CDS
ATTGGTTTCCAGCCTGCAGA+AGG 0.529588 1_2:+56268994 Msa0078610:intron
TCGTGGTACGGTGGAGAAGT+AGG 0.529824 1_2:+56263211 Msa0078610:CDS
CATGCAATCGAGACGGCGGT+TGG 0.529843 1_2:-56262921 None:intergenic
TAAAGATCTTGAGTGGCACT+TGG 0.530907 1_2:+56266970 Msa0078610:CDS
AGATATTGAGTTTACGGTCG+AGG 0.531503 1_2:-56262952 None:intergenic
AAAATTCTGTCACACCAGGC+AGG 0.533000 1_2:-56269815 None:intergenic
CCAATCTGAGTCTCGCGTAA+GGG 0.533674 1_2:-56263094 None:intergenic
AACTCAGGTATCCCTTCTGC+AGG 0.534161 1_2:-56269006 None:intergenic
AAGACCAGATCAGATTATTG+AGG 0.534380 1_2:+56271992 Msa0078610:CDS
CAAAAGAACCTCTCAACTGA+TGG 0.535254 1_2:-56271039 None:intergenic
TGCTTCACGCATTCCCTGGA+AGG 0.535635 1_2:-56269181 None:intergenic
TTTGTTTGGTTGCGGATGAA+GGG 0.535744 1_2:+56263299 Msa0078610:CDS
TGCAACTCGGCGAACAGCAT+CGG 0.536199 1_2:-56266523 None:intergenic
AGCCGAAGCTACAATTGAAA+GGG 0.536884 1_2:+56272630 Msa0078610:three_prime_UTR
TTCGAGCTGAAATGGAAGCT+GGG 0.537932 1_2:+56269154 Msa0078610:CDS
TTATGGTCTGCGACTGAACG+TGG 0.538492 1_2:+56263154 Msa0078610:CDS
GTGTGGAGTGGACATAGAGA+TGG 0.538655 1_2:+56263331 Msa0078610:CDS
GGAAAGAATATAGGGAGTAT+TGG 0.542260 1_2:-56262732 None:intergenic
ACATTTGTACCACGAAACAT+TGG 0.542372 1_2:-56268893 None:intergenic
CAGCCGAAGCTACAATTGAA+AGG 0.544158 1_2:+56272629 Msa0078610:three_prime_UTR
ACTTCATGTTGGGGATGTTG+AGG 0.544204 1_2:+56267904 Msa0078610:CDS
TCTGAGTCTCGCGTAAGGGA+TGG 0.544937 1_2:-56263090 None:intergenic
CAAGTGGCTTGCTGGTGCAA+TGG 0.545187 1_2:+56266628 Msa0078610:CDS
AAAATGCTATCAAGAGGTCC+TGG 0.545545 1_2:-56266897 None:intergenic
GGGAATAGGTTGGTGTGGAG+TGG 0.545958 1_2:+56263319 Msa0078610:CDS
AACCAATTGACTCAACCAAA+CGG 0.548151 1_2:+56272197 Msa0078610:CDS
TACTGTACTGGAGGATCAGA+AGG 0.550107 1_2:+56271009 Msa0078610:CDS
ACAAACATTAGACTTCATGT+TGG 0.550962 1_2:+56267893 Msa0078610:CDS
ATGGTGTTGTACAAAACTCT+TGG 0.551451 1_2:+56272060 Msa0078610:CDS
CTCCCTGAATTCATCGCCAA+AGG 0.551588 1_2:+56262989 Msa0078610:CDS
TGAGGGTTAGAGTGTATGAT+CGG 0.553134 1_2:+56268619 Msa0078610:CDS
GATCTGTGGTCGGGTTCAGA+AGG 0.553223 1_2:+56264364 Msa0078610:CDS
ATCGGATAATTCAAAGGCAA+AGG 0.553375 1_2:+56264558 Msa0078610:CDS
AGCATATAGGTAGGACTGGA+GGG 0.554205 1_2:+56267428 Msa0078610:intron
GCCAACCTGCCAAACCAGCT+TGG 0.554240 1_2:-56269242 None:intergenic
GAACTTGAAACAAGGTCGGC+CGG 0.555555 1_2:-56266432 None:intergenic
CGTGCTATTGGAAATAAGGT+AGG 0.557892 1_2:+56267953 Msa0078610:CDS
TGAATTCAGGGAGAGGGAGG+TGG 0.559758 1_2:-56262979 None:intergenic
TATGGAATGCAAATTTGGGT+AGG 0.560889 1_2:+56266717 Msa0078610:CDS
TGAGTCTCGCGTAAGGGATG+GGG 0.561019 1_2:-56263088 None:intergenic
TGTCCAGGTATTGGACCTGA+AGG 0.561084 1_2:+56266755 Msa0078610:CDS
AATATTACCTCAAGCCACCT+AGG 0.562574 1_2:-56271067 None:intergenic
TGCGGATGAAGGGAATAGGT+TGG 0.563513 1_2:+56263309 Msa0078610:CDS
GGGTTGCAAGAGGTTGAAAT+GGG 0.564094 1_2:+56267077 Msa0078610:CDS
AAATTCTGTCACACCAGGCA+GGG 0.567856 1_2:-56269814 None:intergenic
CTGCGACTGAACGTGGACTC+CGG 0.570318 1_2:+56263161 Msa0078610:CDS
TCATGAGGAATTTCAGACTC+AGG 0.570956 1_2:+56272025 Msa0078610:CDS
AACGGCTCCAGGCACGTCCA+AGG 0.571832 1_2:+56272215 Msa0078610:CDS
CTTAGTATCGGATAATTCAA+AGG 0.572942 1_2:+56264552 Msa0078610:CDS
ACTATCTGTGACATCCATGC+AGG 0.573452 1_2:-56270729 None:intergenic
GGCTTGCTGGTGCAATGGGA+TGG 0.573848 1_2:+56266633 Msa0078610:CDS
TACGCGAGACTCAGATTGGA+CGG 0.573930 1_2:+56263098 Msa0078610:CDS
AGATGCAGCGCACAGGCTTG+TGG 0.573980 1_2:-56270754 None:intergenic
CTGTATGCGTCGTGGTACGG+TGG 0.574593 1_2:+56263202 Msa0078610:CDS
TTGTTCGAAATAATTTGCGA+AGG 0.574719 1_2:+56270980 Msa0078610:CDS
TAAAGGGCCACAAACGTCGT+CGG 0.575235 1_2:-56273173 None:intergenic
CAACTGCCCTAACATGCCAC+TGG 0.575265 1_2:-56272658 None:intergenic
TTCATCTGACAGAGGAGGAA+AGG 0.575700 1_2:+56264431 Msa0078610:CDS
TGAATCGGTTTGGACTTCGC+CGG 0.576063 1_2:+56263273 Msa0078610:CDS
TGTTCGCCGAGTTGCAGCAA+AGG 0.576318 1_2:+56266530 Msa0078610:CDS
CTCGAGTAGATGAACCAATA+CGG 0.576561 1_2:+56270792 Msa0078610:CDS
TAATTCGAGAGAAGGAGGAC+GGG 0.576986 1_2:-56263062 None:intergenic
GTGGAGAAGTAGGTGGTGTG+AGG 0.577805 1_2:+56263221 Msa0078610:CDS
AACCTCTTAAATACAACACC+TGG 0.578781 1_2:+56268750 Msa0078610:CDS
GTAGAAAAGATGCAGCGCAC+AGG 0.579203 1_2:-56270761 None:intergenic
ATGAAGGGAATAGGTTGGTG+TGG 0.579410 1_2:+56263314 Msa0078610:CDS
ATAGACAAAACACTGGATGA+AGG 0.579738 1_2:+56267482 Msa0078610:CDS
GGATGTACGGCGGCGCGGAG+AGG 0.580045 1_2:-56263037 None:intergenic
TCGAGAGAAGGAGGACGGGA+AGG 0.581232 1_2:-56263058 None:intergenic
CAATAGGTACGAAGCCTGCA+TGG 0.582129 1_2:+56270715 Msa0078610:intron
TGGCGATGAATTCAGGGAGA+GGG 0.582484 1_2:-56262985 None:intergenic
GGTGGAATGAATAGAATTGG+AGG 0.583925 1_2:-56262900 None:intergenic
CTGGTGCAATGGGATGGAAA+TGG 0.584105 1_2:+56266639 Msa0078610:CDS
CGCAGACCATAATTGCGACT+CGG 0.585355 1_2:-56263143 None:intergenic
GAACACAAAATGCTATCAAG+AGG 0.585696 1_2:-56266903 None:intergenic
TGTTGTTGTTGGGTTGCAAG+AGG 0.587409 1_2:+56267067 Msa0078610:CDS
AGAACCTAGCCATGAAGTAA+GGG 0.587761 1_2:-56267024 None:intergenic
AGATATAAAGTACTTAGTAT+CGG 0.588110 1_2:+56264540 Msa0078610:CDS
TGTACGGCGGCGCGGAGAGG+AGG 0.588332 1_2:-56263034 None:intergenic
GTCGTTGGAAGAAGAAGAAG+AGG 0.591232 1_2:-56262861 None:intergenic
GATTTGATCTAGGGGATCTG+TGG 0.591401 1_2:+56264350 Msa0078610:intron
TCCGCAACCAAACAAATCGC+CGG 0.591927 1_2:-56263292 None:intergenic
GAAGCTGGGAATGCCTTCCA+GGG 0.591928 1_2:+56269168 Msa0078610:CDS
TTCAGGGAGAGGGAGGTGGT+CGG 0.592018 1_2:-56262975 None:intergenic
ATACCTTCTGTCCAAACGCT+CGG 0.592553 1_2:+56262667 Msa0078610:five_prime_UTR
AAGTTTGAACGACACCAAGC+TGG 0.593721 1_2:+56269228 Msa0078610:CDS
CGATGAATTCAGGGAGAGGG+AGG 0.594579 1_2:-56262982 None:intergenic
ACCACGGTGGCATACGAGGA+TGG 0.594620 1_2:+56266862 Msa0078610:CDS
CTTTCCTAGAACTTGAAACA+AGG 0.597016 1_2:-56266440 None:intergenic
ATCTATTCATCTGACAGAGG+AGG 0.599412 1_2:+56264426 Msa0078610:CDS
TTTGAGCAATTCATTTGATG+TGG 0.599823 1_2:+56272268 Msa0078610:CDS
AGGCTCCCTTTGCTGCAACT+CGG 0.603078 1_2:-56266536 None:intergenic
CAACATAATTCTTCAAAACC+AGG 0.604281 1_2:+56270910 Msa0078610:CDS
TTGGCGATGAATTCAGGGAG+AGG 0.604449 1_2:-56262986 None:intergenic
CCTGAATTCATCGCCAAAGG+CGG 0.604862 1_2:+56262992 Msa0078610:CDS
ATGTCTGCCTCAGATAACTC+AGG 0.605077 1_2:-56269021 None:intergenic
CCTAGAACTTGAAACAAGGT+CGG 0.606149 1_2:-56266436 None:intergenic
GTGCTATTGGAAATAAGGTA+GGG 0.606747 1_2:+56267954 Msa0078610:CDS
GGGAAGGATGTACGGCGGCG+CGG 0.607719 1_2:-56263042 None:intergenic
ATTTGGACAGGATATTCAAG+TGG 0.608816 1_2:+56266612 Msa0078610:CDS
TGTTCGAAATAATTTGCGAA+GGG 0.608875 1_2:+56270981 Msa0078610:CDS
TCATGTTGGGGATGTTGAGG+CGG 0.609394 1_2:+56267907 Msa0078610:CDS
TCTCCGATTCTCATCTCCAA+AGG 0.609708 1_2:-56266556 None:intergenic
AAGCATATAGGTAGGACTGG+AGG 0.611789 1_2:+56267427 Msa0078610:intron
GAAGTAGGTGGTGTGAGGAG+TGG 0.614026 1_2:+56263226 Msa0078610:CDS
AGTTGGCTATGTATTCACAT+TGG 0.614806 1_2:+56266836 Msa0078610:CDS
AACATTGAACAGCAAATGGG+TGG 0.615120 1_2:-56266686 None:intergenic
TGGGGACGTAATTCGAGAGA+AGG 0.616003 1_2:-56263070 None:intergenic
GAAAACATAAAGATCTTGAG+TGG 0.619660 1_2:+56266963 Msa0078610:CDS
CCTGAAGGGTAACCTGATAG+GGG 0.619748 1_2:+56266770 Msa0078610:CDS
TTGTGGTTGAACTTGAATCA+CGG 0.620529 1_2:+56272493 Msa0078610:three_prime_UTR
AGAGATCCTACGTTGACTTG+AGG 0.621762 1_2:+56264476 Msa0078610:CDS
AACAGTGGTGAACACGCACT+CGG 0.622597 1_2:-56272160 None:intergenic
TGTGGAGTGGACATAGAGAT+GGG 0.622977 1_2:+56263332 Msa0078610:CDS
GCTAACCACGGTGGCATACG+AGG 0.623769 1_2:+56266858 Msa0078610:CDS
CAGGCTTGGTCATTGCTGTG+TGG 0.625182 1_2:+56267540 Msa0078610:CDS
GGATATGATAGACAAAACAC+TGG 0.627351 1_2:+56267475 Msa0078610:CDS
CGTTCAAACTTGTATGTGGG+AGG 0.627825 1_2:-56269216 None:intergenic
GAGATGGGAAGATTCGCTGT+TGG 0.628267 1_2:+56263347 Msa0078610:CDS
GTAATTCGAGAGAAGGAGGA+CGG 0.628813 1_2:-56263063 None:intergenic
CTTGCAACCCAACAACAACA+AGG 0.629793 1_2:-56267064 None:intergenic
GTACAGAGAAAGCAAATGCA+AGG 0.630958 1_2:+56272529 Msa0078610:three_prime_UTR
TAAAATAAAGTGTGCCAGCG+TGG 0.631179 1_2:+56262614 None:intergenic
TGTCGTTCAAACTTGTATGT+GGG 0.634355 1_2:-56269219 None:intergenic
GGACGTAATTCGAGAGAAGG+AGG 0.635159 1_2:-56263067 None:intergenic
GACAGAGGAGGAAAGGCACA+AGG 0.636905 1_2:+56264438 Msa0078610:CDS
GTGTGAAGACTCCAGAGACA+AGG 0.636970 1_2:+56272082 Msa0078610:CDS
GGCACTTGGAATGTTGGACA+AGG 0.645154 1_2:+56266984 Msa0078610:CDS
AACAACAAGGCCAACATCTG+AGG 0.646340 1_2:-56267051 None:intergenic
AAAGTGCGTTGTTGTTGTTG+AGG 0.646412 1_2:-56262824 None:intergenic
CATGTTGTGACGAACCACGC+TGG 0.648750 1_2:-56262628 None:intergenic
AAACATTAGACTTCATGTTG+GGG 0.649582 1_2:+56267895 Msa0078610:CDS
TCAAACGTTGGAAATCAGAT+CGG 0.650444 1_2:-56272250 None:intergenic
GTCCAGGTATTGGACCTGAA+GGG 0.651295 1_2:+56266756 Msa0078610:CDS
GCAACAAACCATCAGTTGAG+AGG 0.652514 1_2:+56271031 Msa0078610:CDS
GCTCACGTAATGCCATAATG+GGG 0.653820 1_2:+56266496 Msa0078610:CDS
ATAATTCAAAGGCAAAGGTG+TGG 0.656062 1_2:+56264563 Msa0078610:CDS
GAGGCGGCAGCAGTTCCATG+TGG 0.658265 1_2:+56267923 Msa0078610:CDS
AGGGCAGACTACTGTACTGG+AGG 0.659691 1_2:+56271000 Msa0078610:CDS
ATAGCACGTCCAAAGCCACA+TGG 0.663632 1_2:-56267938 None:intergenic
TTAAAGATCTGTATGCGTCG+TGG 0.664733 1_2:+56263194 Msa0078610:CDS
TGGTACGGTGGAGAAGTAGG+TGG 0.665391 1_2:+56263214 Msa0078610:CDS
TGAGGTATCAGTGCATCATG+AGG 0.665545 1_2:+56272010 Msa0078610:CDS
ATACAAAATTCTGTCACACC+AGG 0.668595 1_2:-56269819 None:intergenic
TTGGTTTCCAGCCTGCAGAA+GGG 0.670134 1_2:+56268995 Msa0078610:intron
AGGGATACCTGAGTTATCTG+AGG 0.671277 1_2:+56269014 Msa0078610:CDS
AATTGAAAGGGAAAATCCAG+TGG 0.673658 1_2:+56272642 Msa0078610:three_prime_UTR
AAAATCTATTCATCTGACAG+AGG 0.675320 1_2:+56264423 Msa0078610:CDS
GTATTCACATTGGCTAACCA+CGG 0.676920 1_2:+56266846 Msa0078610:CDS
CTCACGTAATGCCATAATGG+GGG 0.677397 1_2:+56266497 Msa0078610:CDS
GCTATCAAGAGGTCCTGGAG+AGG 0.678266 1_2:-56266892 None:intergenic
ATTGGAGCATGCAATCGAGA+CGG 0.679008 1_2:-56262928 None:intergenic
CTGGCTCCTCAAGTCAACGT+AGG 0.684792 1_2:-56264482 None:intergenic
GTGGTCGGGTTCAGAAGGAG+GGG 0.685407 1_2:+56264369 Msa0078610:CDS
TCCATCCTCGTATGCCACCG+TGG 0.685454 1_2:-56266863 None:intergenic
TGAGCGCTGAAAGAACCCAA+TGG 0.689656 1_2:-56266478 None:intergenic
TGTTGAGGAGTAGACGACAG+TGG 0.691819 1_2:-56262809 None:intergenic
GCAATACTGAAGAGACAACA+GGG 0.696256 1_2:-56269886 None:intergenic
GGAGCATGCAATCGAGACGG+CGG 0.701657 1_2:-56262925 None:intergenic
CTGAAGGGTAACCTGATAGG+GGG 0.706991 1_2:+56266771 Msa0078610:CDS
TTATCTTGGCAAGCTCATCG+TGG 0.720020 1_2:+56263406 Msa0078610:CDS
ATCCATTAGATCGAAACGCG+CGG 0.726055 1_2:-56262753 None:intergenic
TTCACATTGGCTAACCACGG+TGG 0.730525 1_2:+56266849 Msa0078610:CDS
AGGACGGGAAGGATGTACGG+CGG 0.758417 1_2:-56263047 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATAATTTATAAATTTTT+AGG - chr1_2:56265811-56265830 None:intergenic 0.0%
!! AAAAAAAAATAAAAAATATT+GGG - chr1_2:56268477-56268496 None:intergenic 0.0%
!! TAAAAAAAAATAAAAAATAT+TGG - chr1_2:56268478-56268497 None:intergenic 0.0%
!! AAAATGAATAAAATTCAAAT+AGG + chr1_2:56264976-56264995 Msa0078610:intron 10.0%
!! AAATGAATAAAATTCAAATA+GGG + chr1_2:56264977-56264996 Msa0078610:intron 10.0%
!! ATTTAATAATGTGAAAAAAT+AGG - chr1_2:56265230-56265249 None:intergenic 10.0%
!! GTTATAGTATAAATATATAT+TGG + chr1_2:56267635-56267654 Msa0078610:intron 10.0%
!!! AATTTAATTTTTCATTCTTT+TGG + chr1_2:56269590-56269609 Msa0078610:intron 10.0%
!!! ATTTAATTTTTCATTCTTTT+GGG + chr1_2:56269591-56269610 Msa0078610:intron 10.0%
!!! ACTATTTTGTTTTATTATTT+TGG + chr1_2:56272343-56272362 Msa0078610:intron 10.0%
!!! TAAAAGATTTTACATTTAAA+GGG - chr1_2:56273192-56273211 None:intergenic 10.0%
!! AGATAATCTTTCATTAAAAT+CGG - chr1_2:56263392-56263411 None:intergenic 15.0%
!!! ATTTTAATGAAAGATTATCT+TGG + chr1_2:56263392-56263411 Msa0078610:CDS 15.0%
!!! ATATTTAGACTATTTTTGTT+AGG + chr1_2:56264748-56264767 Msa0078610:intron 15.0%
!!! TATTTAGACTATTTTTGTTA+GGG + chr1_2:56264749-56264768 Msa0078610:intron 15.0%
!! TTAATAAAATCTCTCATTTA+TGG - chr1_2:56265712-56265731 None:intergenic 15.0%
!! ATTATATTATGTGAATATAG+AGG + chr1_2:56265837-56265856 Msa0078610:intron 15.0%
!! GCAATCTAAAAAATAATAAT+AGG + chr1_2:56265894-56265913 Msa0078610:intron 15.0%
!! ATGTATAAAGATATCATAAA+TGG + chr1_2:56266189-56266208 Msa0078610:intron 15.0%
!! AAAAATACACTTAAATGATT+AGG - chr1_2:56266281-56266300 None:intergenic 15.0%
!!! CTATAATATCAAATGATTTT+AGG - chr1_2:56268235-56268254 None:intergenic 15.0%
!! AATAGAAAAACATATTTACA+AGG + chr1_2:56268287-56268306 Msa0078610:intron 15.0%
!!! AAAACAATATTTTATTCAAG+AGG + chr1_2:56268516-56268535 Msa0078610:intron 15.0%
!! ACGTATAATTATAAATTGAA+TGG + chr1_2:56269640-56269659 Msa0078610:intron 15.0%
!! TTTATATGTTTATTGCATTT+GGG + chr1_2:56269923-56269942 Msa0078610:intron 15.0%
!!! AATGATTTTACATTACAAAT+AGG + chr1_2:56270502-56270521 Msa0078610:intron 15.0%
!!! ATGATTTTACATTACAAATA+GGG + chr1_2:56270503-56270522 Msa0078610:intron 15.0%
!! CAAAAATTTAAAGAAAAAGA+TGG - chr1_2:56270669-56270688 None:intergenic 15.0%
!! TAATTATTTATGATTACAGA+AGG + chr1_2:56271120-56271139 Msa0078610:intron 15.0%
!! TGCTAAAAAATTATACATTA+TGG + chr1_2:56271307-56271326 Msa0078610:intron 15.0%
!!! ATTTTGTTTTATTATTTTGG+TGG + chr1_2:56272346-56272365 Msa0078610:intron 15.0%
!!! TTTTTTTCTTTTCTTTTCAT+AGG + chr1_2:56272466-56272485 Msa0078610:intron 15.0%
!!! TTTTTTCTTTTCTTTTCATA+GGG + chr1_2:56272467-56272486 Msa0078610:intron 15.0%
!! ATGTATATTGTATTAAATGA+AGG - chr1_2:56272828-56272847 None:intergenic 15.0%
!!! TTTTGTATTTTCCTTATAAA+GGG - chr1_2:56272956-56272975 None:intergenic 15.0%
!!! TTTTTGTATTTTCCTTATAA+AGG - chr1_2:56272957-56272976 None:intergenic 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG + chr1_2:56273040-56273059 Msa0078610:intron 15.0%
!!! TTTTTTACTAATAATCCATA+TGG - chr1_2:56273148-56273167 None:intergenic 15.0%
!!! CTAAAAGATTTTACATTTAA+AGG - chr1_2:56273193-56273212 None:intergenic 15.0%
!!! TTAAATGTAAAATCTTTTAG+TGG + chr1_2:56273193-56273212 Msa0078610:three_prime_UTR 15.0%
!!! ATTTTTTAGATAAGCAACTT+TGG + chr1_2:56263573-56263592 Msa0078610:intron 20.0%
!! TAAGTTGTTTATTATAACAG+AGG - chr1_2:56263627-56263646 None:intergenic 20.0%
!!! TAAGTTTTGTGAGATTATTT+GGG - chr1_2:56263829-56263848 None:intergenic 20.0%
!!! ATAAGTTTTGTGAGATTATT+TGG - chr1_2:56263830-56263849 None:intergenic 20.0%
!! AGACCATAAAAAAAAGAAAA+GGG + chr1_2:56263884-56263903 Msa0078610:intron 20.0%
!! GTAAAAAAACCATAAACTTA+TGG - chr1_2:56264094-56264113 None:intergenic 20.0%
!!! GTTTTTTTACTTACAAACAT+AGG + chr1_2:56264104-56264123 Msa0078610:intron 20.0%
!!! TTTTTTCTTGATTTGATCTA+GGG + chr1_2:56264341-56264360 Msa0078610:intron 20.0%
!!! AGATATAAAGTACTTAGTAT+CGG + chr1_2:56264540-56264559 Msa0078610:CDS 20.0%
!! GTAATATATGAATGTTAGTA+TGG + chr1_2:56264652-56264671 Msa0078610:intron 20.0%
!! TAAGTCAAGTGATAAAAAAT+AGG + chr1_2:56265171-56265190 Msa0078610:intron 20.0%
!! TAAAAAATAGGAAAGAACTT+AGG + chr1_2:56265183-56265202 Msa0078610:intron 20.0%
!!! AAGCTAAATAGTTTGTAATT+TGG + chr1_2:56265371-56265390 Msa0078610:intron 20.0%
!!! AAATTTAAAACTTCAGTTCA+AGG + chr1_2:56265420-56265439 Msa0078610:intron 20.0%
!!! TCTGAAATGAAATTTTCTTT+TGG + chr1_2:56265565-56265584 Msa0078610:intron 20.0%
!! TTAATCAACAAGCATAAAAA+TGG - chr1_2:56265596-56265615 None:intergenic 20.0%
!! TATTAATCCAACTATTGAAT+TGG + chr1_2:56265726-56265745 Msa0078610:intron 20.0%
!! GGTTATATATATTCAATGAT+TGG + chr1_2:56265858-56265877 Msa0078610:intron 20.0%
!! TATACTATATCCATACATAT+TGG - chr1_2:56265950-56265969 None:intergenic 20.0%
!! TTTATACTATAACAAACAAC+AGG - chr1_2:56267628-56267647 None:intergenic 20.0%
!!! TATATATTGGTTTTTGAAGT+TGG + chr1_2:56267648-56267667 Msa0078610:intron 20.0%
!!! TGTTGTTGTAAATTCTATTT+TGG + chr1_2:56267711-56267730 Msa0078610:intron 20.0%
!! TCTTTAATAGTAGATATGTT+AGG + chr1_2:56268047-56268066 Msa0078610:intron 20.0%
!! AAAAATAAAAAATATTGGGG+TGG - chr1_2:56268473-56268492 None:intergenic 20.0%
!!! TTTTACAGAATTTGCTTTTA+AGG + chr1_2:56268493-56268512 Msa0078610:intron 20.0%
!! ATTACTTGAAAAGAATAAAG+TGG - chr1_2:56268932-56268951 None:intergenic 20.0%
!!! TTTTTGATGCTATAGTTTAA+AGG - chr1_2:56269399-56269418 None:intergenic 20.0%
!!! AATATAAACAGCATTTTTTG+TGG - chr1_2:56269685-56269704 None:intergenic 20.0%
!!! TATGGAATGTTTATTTTGAA+GGG + chr1_2:56269765-56269784 Msa0078610:intron 20.0%
!! GTTTATATGTTTATTGCATT+TGG + chr1_2:56269922-56269941 Msa0078610:intron 20.0%
!! AAATTTGCCTTATCAATAAA+GGG - chr1_2:56270040-56270059 None:intergenic 20.0%
!! TAAATTTGCCTTATCAATAA+AGG - chr1_2:56270041-56270060 None:intergenic 20.0%
!! TGTGGGTAAAATATATAATA+CGG + chr1_2:56270323-56270342 Msa0078610:intron 20.0%
!! AAGATTGTGAACAAATATAT+CGG + chr1_2:56271488-56271507 Msa0078610:intron 20.0%
! ATTCAATTCAGAACTGAAAA+TGG - chr1_2:56262698-56262717 None:intergenic 25.0%
! CTTATTTGAGCTTATCTATT+GGG - chr1_2:56263853-56263872 None:intergenic 25.0%
!!! TCTTTTTTTTATGGTCTGTT+TGG - chr1_2:56263881-56263900 None:intergenic 25.0%
! CAGACCATAAAAAAAAGAAA+AGG + chr1_2:56263883-56263902 Msa0078610:intron 25.0%
!!! TTGCCCTTTTCTTTTTTTTA+TGG - chr1_2:56263890-56263909 None:intergenic 25.0%
! TATAAGCTTGTAGATGTTTA+TGG + chr1_2:56264131-56264150 Msa0078610:intron 25.0%
!! TTTTAGCAAAATTGAGATGA+AGG + chr1_2:56264172-56264191 Msa0078610:intron 25.0%
!!! GTTTTTTCTTGATTTGATCT+AGG + chr1_2:56264340-56264359 Msa0078610:intron 25.0%
!!! TTTTTCTTGATTTGATCTAG+GGG + chr1_2:56264342-56264361 Msa0078610:intron 25.0%
!! GGTATTTTTCATATGCTTTA+TGG + chr1_2:56264593-56264612 Msa0078610:CDS 25.0%
!! TCATAATTTTTCATATCCTG+TGG + chr1_2:56264716-56264735 Msa0078610:intron 25.0%
! ACTTGATAAGAAGTTTAAAG+TGG + chr1_2:56264797-56264816 Msa0078610:intron 25.0%
!!! TTAAAGTGGAAGTTTTATCT+TGG + chr1_2:56264811-56264830 Msa0078610:intron 25.0%
!!! TAAAGTGGAAGTTTTATCTT+GGG + chr1_2:56264812-56264831 Msa0078610:intron 25.0%
! CTTGTTAAGGATTCAAAAAA+AGG - chr1_2:56264905-56264924 None:intergenic 25.0%
! GTATCTACACTTAACAAAAA+GGG - chr1_2:56264954-56264973 None:intergenic 25.0%
! AGTATCTACACTTAACAAAA+AGG - chr1_2:56264955-56264974 None:intergenic 25.0%
!!! TTACACAAATGGTTCTATTT+TGG + chr1_2:56265077-56265096 Msa0078610:intron 25.0%
!!! TACACAAATGGTTCTATTTT+GGG + chr1_2:56265078-56265097 Msa0078610:intron 25.0%
!! ACAGTTTTACCCATAAAATT+AGG - chr1_2:56265279-56265298 None:intergenic 25.0%
!! AAACTGTTTGTGTATTTTGT+AGG + chr1_2:56265292-56265311 Msa0078610:intron 25.0%
! TATCTTAGAGCTTATTCTTT+AGG - chr1_2:56265351-56265370 None:intergenic 25.0%
! TCATTTCAGATACTAGATTA+AGG - chr1_2:56265555-56265574 None:intergenic 25.0%
! TACTTATATCTTGTAGATCA+GGG - chr1_2:56265769-56265788 None:intergenic 25.0%
! TTGTGTCTAATATTTAGACT+TGG + chr1_2:56265922-56265941 Msa0078610:intron 25.0%
! TTTATACATCTCATGTCATA+GGG - chr1_2:56266178-56266197 None:intergenic 25.0%
!! TTGAAAGTTTTCAATTCAGA+TGG + chr1_2:56266366-56266385 Msa0078610:CDS 25.0%
! TAACAATTGATGGAATGATT+TGG + chr1_2:56266595-56266614 Msa0078610:CDS 25.0%
! AAAAACATTGAACAGCAAAT+GGG - chr1_2:56266692-56266711 None:intergenic 25.0%
!!! GTTCAATGTTTTTGTACTTA+TGG + chr1_2:56266699-56266718 Msa0078610:CDS 25.0%
! TACTTATGGAATGCAAATTT+GGG + chr1_2:56266713-56266732 Msa0078610:CDS 25.0%
! AAGGTAGGTTAATATTATCA+TGG + chr1_2:56268113-56268132 Msa0078610:intron 25.0%
! TAAATAAATACACTGTGTAG+TGG - chr1_2:56268159-56268178 None:intergenic 25.0%
! TAGTATGTTTGTTCATTTAC+CGG + chr1_2:56268373-56268392 Msa0078610:intron 25.0%
! ACAATCAATTTCCATATCAA+TGG - chr1_2:56268578-56268597 None:intergenic 25.0%
! TCAAGATAAATACATGGATA+AGG - chr1_2:56268810-56268829 None:intergenic 25.0%
!!! AGTTTAAAGGTGTTAGTATT+TGG - chr1_2:56269386-56269405 None:intergenic 25.0%
! TATATCAATTGCTGAAATTG+TGG + chr1_2:56269517-56269536 Msa0078610:intron 25.0%
! ATATCAATTGCTGAAATTGT+GGG + chr1_2:56269518-56269537 Msa0078610:intron 25.0%
!!! CATTTTTTGTGGCTTAAAAA+TGG - chr1_2:56269674-56269693 None:intergenic 25.0%
!!! GTATGGAATGTTTATTTTGA+AGG + chr1_2:56269764-56269783 Msa0078610:intron 25.0%
! GTATTAAGTCTCATTATACT+TGG + chr1_2:56269984-56270003 Msa0078610:intron 25.0%
! AATTTGCCTTATCAATAAAG+GGG - chr1_2:56270039-56270058 None:intergenic 25.0%
!! TTTTACCCACAATAAAAGTA+CGG - chr1_2:56270314-56270333 None:intergenic 25.0%
!!! AGACACATGTTTTTTGTATA+GGG - chr1_2:56270380-56270399 None:intergenic 25.0%
!!! AAGACACATGTTTTTTGTAT+AGG - chr1_2:56270381-56270400 None:intergenic 25.0%
! ATAAGACACTCAATTTCAAT+TGG - chr1_2:56270563-56270582 None:intergenic 25.0%
! TATATCATCTTACCTTCAAT+AGG + chr1_2:56270699-56270718 Msa0078610:intron 25.0%
! TTTGTACTTATGATAGTTTC+AGG - chr1_2:56270890-56270909 None:intergenic 25.0%
! AGATTGTGAACAAATATATC+GGG + chr1_2:56271489-56271508 Msa0078610:intron 25.0%
!! GAAGTTTCATATTGTAGTTT+TGG + chr1_2:56271649-56271668 Msa0078610:intron 25.0%
! GTATTCATACACTCAAAATT+CGG - chr1_2:56271872-56271891 None:intergenic 25.0%
! ATGTGCAGATAATTATCATA+TGG - chr1_2:56271937-56271956 None:intergenic 25.0%
!!! TTGTTTTATTATTTTGGTGG+AGG + chr1_2:56272349-56272368 Msa0078610:intron 25.0%
! TGATACCATTTAATTCCAAA+AGG + chr1_2:56272566-56272585 Msa0078610:three_prime_UTR 25.0%
!! TAAGTTTGTCTTTTAGATGA+TGG + chr1_2:56272694-56272713 Msa0078610:three_prime_UTR 25.0%
!! GTTGCTTCTAACAAATATTT+TGG + chr1_2:56272716-56272735 Msa0078610:three_prime_UTR 25.0%
! TATAGGAAGTCATTAACAAA+TGG - chr1_2:56272797-56272816 None:intergenic 25.0%
! AAATGAAGGTCACATATTAT+AGG - chr1_2:56272814-56272833 None:intergenic 25.0%
!!! TTCAAAATGAGTGTCATTTT+AGG - chr1_2:56273105-56273124 None:intergenic 25.0%
!!! AAATGACACTCATTTTGAAA+CGG + chr1_2:56273106-56273125 Msa0078610:intron 25.0%
!! GATCTTTAAAATTCCAGAAC+CGG - chr1_2:56263183-56263202 None:intergenic 30.0%
TCAATCACAATCACTTCTTA+TGG + chr1_2:56263439-56263458 Msa0078610:CDS 30.0%
AAATAAGCTGAAAACTGCTT+AGG + chr1_2:56263785-56263804 Msa0078610:intron 30.0%
GCTTATTTGAGCTTATCTAT+TGG - chr1_2:56263854-56263873 None:intergenic 30.0%
! TTTTTATGGTCTGTTTGGAT+TGG - chr1_2:56263876-56263895 None:intergenic 30.0%
CATAAACTTATGGTCTGTTT+GGG - chr1_2:56264084-56264103 None:intergenic 30.0%
AGGAGATAATTTCAACTCAT+TGG + chr1_2:56264192-56264211 Msa0078610:intron 30.0%
AAGGAGGGGTTATAAAAATA+TGG + chr1_2:56264383-56264402 Msa0078610:CDS 30.0%
GGTTATAAAAATATGGCCTT+GGG + chr1_2:56264390-56264409 Msa0078610:CDS 30.0%
AAAATCTATTCATCTGACAG+AGG + chr1_2:56264423-56264442 Msa0078610:CDS 30.0%
! CTTAGTATCGGATAATTCAA+AGG + chr1_2:56264552-56264571 Msa0078610:CDS 30.0%
TATATTACTACCACTAAGAG+AGG - chr1_2:56264640-56264659 None:intergenic 30.0%
TAGAAGTCAACAATGTTCAA+AGG + chr1_2:56265106-56265125 Msa0078610:intron 30.0%
CAATTCTTGACTTAGTAAAC+CGG + chr1_2:56265145-56265164 Msa0078610:intron 30.0%
AATTCTTGACTTAGTAAACC+GGG + chr1_2:56265146-56265165 Msa0078610:intron 30.0%
! ACTGCTTCATCCTAATTTTA+TGG + chr1_2:56265266-56265285 Msa0078610:intron 30.0%
! CTGCTTCATCCTAATTTTAT+GGG + chr1_2:56265267-56265286 Msa0078610:intron 30.0%
TAATCCAACTATTGAATTGG+AGG + chr1_2:56265729-56265748 Msa0078610:intron 30.0%
AAAACCTCCAATTCAATAGT+TGG - chr1_2:56265736-56265755 None:intergenic 30.0%
GTACTTATATCTTGTAGATC+AGG - chr1_2:56265770-56265789 None:intergenic 30.0%
! TGTCACATTAGTTATTTCCT+AGG + chr1_2:56265974-56265993 Msa0078610:intron 30.0%
! GTCACATTAGTTATTTCCTA+GGG + chr1_2:56265975-56265994 Msa0078610:intron 30.0%
TTACCTAGTTGTTCTTTCAT+GGG - chr1_2:56266064-56266083 None:intergenic 30.0%
! GAATGCATTACATTTTTACG+CGG + chr1_2:56266093-56266112 Msa0078610:intron 30.0%
TTATACATCTCATGTCATAG+GGG - chr1_2:56266177-56266196 None:intergenic 30.0%
CTTTATACATCTCATGTCAT+AGG - chr1_2:56266179-56266198 None:intergenic 30.0%
CTAAGGATCAAATAACAATG+AGG - chr1_2:56266222-56266241 None:intergenic 30.0%
ATGTAGACAAAGAGAAACTA+AGG - chr1_2:56266239-56266258 None:intergenic 30.0%
CTAGCTTATATCAAATTGAC+AGG - chr1_2:56266307-56266326 None:intergenic 30.0%
CAAAAACATTGAACAGCAAA+TGG - chr1_2:56266693-56266712 None:intergenic 30.0%
GTACTTATGGAATGCAAATT+TGG + chr1_2:56266712-56266731 Msa0078610:CDS 30.0%
! TAGCATTTTGTGTTCAGAAT+TGG + chr1_2:56266911-56266930 Msa0078610:CDS 30.0%
! AGCATTTTGTGTTCAGAATT+GGG + chr1_2:56266912-56266931 Msa0078610:CDS 30.0%
GAAAACATAAAGATCTTGAG+TGG + chr1_2:56266963-56266982 Msa0078610:CDS 30.0%
TTTGACCATGCAAAAATTCA+TGG + chr1_2:56267267-56267286 Msa0078610:intron 30.0%
GTTATACTGTGTATGTATGT+GGG - chr1_2:56267353-56267372 None:intergenic 30.0%
AGTTATACTGTGTATGTATG+TGG - chr1_2:56267354-56267373 None:intergenic 30.0%
TGTTATGAACAAGAAAGGTT+AGG - chr1_2:56267385-56267404 None:intergenic 30.0%
GGTTCAACATTTAAACGAAT+TGG + chr1_2:56267503-56267522 Msa0078610:CDS 30.0%
!!! TATTGGTTTTTGAAGTTGGT+TGG + chr1_2:56267652-56267671 Msa0078610:intron 30.0%
!!! ATTGGTTTTTGAAGTTGGTT+GGG + chr1_2:56267653-56267672 Msa0078610:intron 30.0%
GAATTTACAACAACAAAAGC+AGG - chr1_2:56267706-56267725 None:intergenic 30.0%
AACTTCGAAAACGAGATATA+CGG - chr1_2:56267824-56267843 None:intergenic 30.0%
ACAAACATTAGACTTCATGT+TGG + chr1_2:56267893-56267912 Msa0078610:CDS 30.0%
CAAACATTAGACTTCATGTT+GGG + chr1_2:56267894-56267913 Msa0078610:CDS 30.0%
AAACATTAGACTTCATGTTG+GGG + chr1_2:56267895-56267914 Msa0078610:CDS 30.0%
! TTTCTTGTGTTTCTACATCT+TGG + chr1_2:56268021-56268040 Msa0078610:intron 30.0%
AATCCTACAAGAAAAACTGT+CGG - chr1_2:56268082-56268101 None:intergenic 30.0%
GTAGGATTATGAGAATTCTA+AGG + chr1_2:56268094-56268113 Msa0078610:intron 30.0%
!! GATTATGAGAATTCTAAGGT+AGG + chr1_2:56268098-56268117 Msa0078610:intron 30.0%
!! TCAAATGATTTTAGGTGTAG+TGG - chr1_2:56268227-56268246 None:intergenic 30.0%
AAATAATGAGTTAACCAGAC+TGG + chr1_2:56268425-56268444 Msa0078610:intron 30.0%
TGTCATTCTAACCATTGATA+TGG + chr1_2:56268564-56268583 Msa0078610:intron 30.0%
GTTGTATTTAAGAGGTTTGT+TGG - chr1_2:56268747-56268766 None:intergenic 30.0%
AACAGGTCAAGATAAATACA+TGG - chr1_2:56268816-56268835 None:intergenic 30.0%
TATCTCAAAGATGCTTTGAT+TGG + chr1_2:56269112-56269131 Msa0078610:CDS 30.0%
AAAATCATTATTACGAGGTG+AGG - chr1_2:56269474-56269493 None:intergenic 30.0%
CAGTGAAAATCATTATTACG+AGG - chr1_2:56269479-56269498 None:intergenic 30.0%
TATCAATTGCTGAAATTGTG+GGG + chr1_2:56269519-56269538 Msa0078610:intron 30.0%
!! TGAAAGACACTTGATTTGTA+TGG + chr1_2:56269747-56269766 Msa0078610:intron 30.0%
GTTTATTGCATTTGGGTATA+CGG + chr1_2:56269930-56269949 Msa0078610:intron 30.0%
ACACACATATGCATAAAAGA+GGG + chr1_2:56270085-56270104 Msa0078610:intron 30.0%
GTACATCACAAGAATATCAA+AGG + chr1_2:56270151-56270170 Msa0078610:intron 30.0%
AAGAATATCAAAGGATTGAC+AGG + chr1_2:56270160-56270179 Msa0078610:intron 30.0%
! AACATTTTGCTAGAACAAGT+TGG + chr1_2:56270263-56270282 Msa0078610:intron 30.0%
!! TGAAGAAAGTGTCACATATA+GGG - chr1_2:56270350-56270369 None:intergenic 30.0%
!! TTGAAGAAAGTGTCACATAT+AGG - chr1_2:56270351-56270370 None:intergenic 30.0%
ATGTGACACTTTCTTCAAAT+CGG + chr1_2:56270353-56270372 Msa0078610:intron 30.0%
TAATGCTACACAATCAGTAA+AGG - chr1_2:56270609-56270628 None:intergenic 30.0%
CAACATAATTCTTCAAAACC+AGG + chr1_2:56270910-56270929 Msa0078610:CDS 30.0%
! TTGTTCGAAATAATTTGCGA+AGG + chr1_2:56270980-56270999 Msa0078610:CDS 30.0%
! TGTTCGAAATAATTTGCGAA+GGG + chr1_2:56270981-56271000 Msa0078610:CDS 30.0%
AAAGTAACAAAAAAGCTGCA+AGG + chr1_2:56271193-56271212 Msa0078610:intron 30.0%
!! ATGTAAAGCAAATTTTGGCA+TGG - chr1_2:56271225-56271244 None:intergenic 30.0%
! TGTGCATGTAAAGCAAATTT+TGG - chr1_2:56271230-56271249 None:intergenic 30.0%
AGATGAGATCTACACATTTA+AGG + chr1_2:56271363-56271382 Msa0078610:intron 30.0%
TCAGTCATCAATGTTTACAA+TGG - chr1_2:56271416-56271435 None:intergenic 30.0%
GATTGTGAACAAATATATCG+GGG + chr1_2:56271490-56271509 Msa0078610:intron 30.0%
!! TTAGATGTTTTGCTATCACA+TGG + chr1_2:56271555-56271574 Msa0078610:intron 30.0%
!!! CTAGTCTTTTTTTAGTTCAC+AGG - chr1_2:56271809-56271828 None:intergenic 30.0%
! AAAAGACTAGTTCCAACAAT+TGG + chr1_2:56271819-56271838 Msa0078610:intron 30.0%
GTAGTACTAAATCCAATTGT+TGG - chr1_2:56271834-56271853 None:intergenic 30.0%
! ATCTGCACATTTTATGATTC+AGG + chr1_2:56271947-56271966 Msa0078610:intron 30.0%
!!! GGAAGCAATTTTGATTGTTA+AGG + chr1_2:56272103-56272122 Msa0078610:CDS 30.0%
!!! ATTTTGATTGTTAAGGTGCA+TGG + chr1_2:56272110-56272129 Msa0078610:CDS 30.0%
!! TTTTGATTGTTAAGGTGCAT+GGG + chr1_2:56272111-56272130 Msa0078610:CDS 30.0%
! TTTTCTTGGATGAATAACAG+TGG - chr1_2:56272178-56272197 None:intergenic 30.0%
!!! TTGAGTCAATTGGTTTTTCT+TGG - chr1_2:56272192-56272211 None:intergenic 30.0%
TTTGAGCAATTCATTTGATG+TGG + chr1_2:56272268-56272287 Msa0078610:CDS 30.0%
AAATAGTCACTCACCTTAAT+TGG - chr1_2:56272330-56272349 None:intergenic 30.0%
AACTGATAAACTATCTTGCA+AGG + chr1_2:56272379-56272398 Msa0078610:intron 30.0%
ACTGATAAACTATCTTGCAA+GGG + chr1_2:56272380-56272399 Msa0078610:intron 30.0%
TTATTATTGCATGCATACAC+AGG - chr1_2:56272415-56272434 None:intergenic 30.0%
GCAAACATCTTGATTATGTT+TGG + chr1_2:56272435-56272454 Msa0078610:intron 30.0%
! TTGCTTGGAATTTTGTGTAA+TGG + chr1_2:56272767-56272786 Msa0078610:three_prime_UTR 30.0%
!! AAGTGACACTCATTTTGAAA+CGG - chr1_2:56272865-56272884 None:intergenic 30.0%
!! TTCAAAATGAGTGTCACTTT+AGG + chr1_2:56272866-56272885 Msa0078610:intron 30.0%
TTGGCACACAAATTAAGAAA+TGG + chr1_2:56272891-56272910 Msa0078610:intron 30.0%
TTACTAAACTGCCCTTTATA+AGG + chr1_2:56272942-56272961 Msa0078610:intron 30.0%
AAATTGTGTGAGAGAAAAGT+TGG + chr1_2:56272991-56273010 Msa0078610:intron 30.0%
! AAAAGTTGGAGTATTTATCG+AGG + chr1_2:56273005-56273024 Msa0078610:intron 30.0%
GTATTTATCGAGGATAAAGT+TGG + chr1_2:56273015-56273034 Msa0078610:intron 30.0%
! GGAAAGAATATAGGGAGTAT+TGG - chr1_2:56262735-56262754 None:intergenic 35.0%
! GTTGGTGGAATGAATAGAAT+TGG - chr1_2:56262906-56262925 None:intergenic 35.0%
GTGATTGTGATTGAAAGAAC+AGG - chr1_2:56263433-56263452 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + chr1_2:56263751-56263770 Msa0078610:intron 35.0%
AAAAAAAGAAAAGGGCAACC+CGG + chr1_2:56263892-56263911 Msa0078610:intron 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr1_2:56263984-56264003 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr1_2:56263983-56264002 Msa0078610:intron 35.0%
CCATAAACTTATGGTCTGTT+TGG - chr1_2:56264085-56264104 None:intergenic 35.0%
CCAAACAGACCATAAGTTTA+TGG + chr1_2:56264082-56264101 Msa0078610:intron 35.0%
AAGCTTGTAGATGTTTATGG+AGG + chr1_2:56264134-56264153 Msa0078610:intron 35.0%
GGGTTATAAAAATATGGCCT+TGG + chr1_2:56264389-56264408 Msa0078610:CDS 35.0%
! TATAAAAATATGGCCTTGGG+AGG + chr1_2:56264393-56264412 Msa0078610:CDS 35.0%
ATCGGATAATTCAAAGGCAA+AGG + chr1_2:56264558-56264577 Msa0078610:CDS 35.0%
ATAATTCAAAGGCAAAGGTG+TGG + chr1_2:56264563-56264582 Msa0078610:CDS 35.0%
AACACACTCTCTTACACAAA+TGG + chr1_2:56265066-56265085 Msa0078610:intron 35.0%
AGTCAACAATGTTCAAAGGA+TGG + chr1_2:56265110-56265129 Msa0078610:intron 35.0%
CGGTTTACTAAGTCAAGAAT+TGG - chr1_2:56265147-56265166 None:intergenic 35.0%
TTTATCACTTGACTTACTCC+CGG - chr1_2:56265167-56265186 None:intergenic 35.0%
TATGAAAGTTAGTGACATCG+AGG - chr1_2:56265398-56265417 None:intergenic 35.0%
AACTTCAGTTCAAGGTAAAG+TGG + chr1_2:56265428-56265447 Msa0078610:intron 35.0%
ACTTCAGTTCAAGGTAAAGT+GGG + chr1_2:56265429-56265448 Msa0078610:intron 35.0%
!! TGTATACTTTTCAAGCCCAA+GGG + chr1_2:56265463-56265482 Msa0078610:intron 35.0%
TATGTGTGTCTTTGTCATTG+TGG - chr1_2:56265634-56265653 None:intergenic 35.0%
ACAATGACAAAGACACACAT+AGG + chr1_2:56265633-56265652 Msa0078610:intron 35.0%
! GTATGTCAAGATTTTACGCT+TGG - chr1_2:56265669-56265688 None:intergenic 35.0%
! AGACTTGGTACCAATATGTA+TGG + chr1_2:56265937-56265956 Msa0078610:intron 35.0%
AAACCCATGAAAGAACAACT+AGG + chr1_2:56266058-56266077 Msa0078610:intron 35.0%
CTTACCTAGTTGTTCTTTCA+TGG - chr1_2:56266065-56266084 None:intergenic 35.0%
AGCATGCATCGGAATAAAAA+AGG - chr1_2:56266143-56266162 None:intergenic 35.0%
TATACATCTCATGTCATAGG+GGG - chr1_2:56266176-56266195 None:intergenic 35.0%
CTAGTGCTTATTCATGTACA+GGG + chr1_2:56266323-56266342 Msa0078610:intron 35.0%
TTTCAATTCAGATGGCCAAA+TGG + chr1_2:56266374-56266393 Msa0078610:CDS 35.0%
CTTTCCTAGAACTTGAAACA+AGG - chr1_2:56266443-56266462 None:intergenic 35.0%
ACAGAAACCAAAGTTCCATT+GGG + chr1_2:56266463-56266482 Msa0078610:CDS 35.0%
GCACTTGTAGTAACAATTGA+TGG + chr1_2:56266585-56266604 Msa0078610:CDS 35.0%
! ATTGATGGAATGATTTGGAC+AGG + chr1_2:56266600-56266619 Msa0078610:CDS 35.0%
ATTTGGACAGGATATTCAAG+TGG + chr1_2:56266612-56266631 Msa0078610:CDS 35.0%
TATGGAATGCAAATTTGGGT+AGG + chr1_2:56266717-56266736 Msa0078610:CDS 35.0%
!!! CCAACTGTCATTTTTACAAG+TGG - chr1_2:56266816-56266835 None:intergenic 35.0%
CCACTTGTAAAAATGACAGT+TGG + chr1_2:56266813-56266832 Msa0078610:CDS 35.0%
GTAAAAATGACAGTTGGAGT+TGG + chr1_2:56266819-56266838 Msa0078610:CDS 35.0%
AGTTGGCTATGTATTCACAT+TGG + chr1_2:56266836-56266855 Msa0078610:CDS 35.0%
GAACACAAAATGCTATCAAG+AGG - chr1_2:56266906-56266925 None:intergenic 35.0%
! ATTTTGTGTTCAGAATTGGG+CGG + chr1_2:56266915-56266934 Msa0078610:CDS 35.0%
ACCATGCAAAAATTCATGGA+TGG + chr1_2:56267271-56267290 Msa0078610:intron 35.0%
! ACCATCCATGAATTTTTGCA+TGG - chr1_2:56267275-56267294 None:intergenic 35.0%
TATATGCTTGAGAGAGATAG+GGG - chr1_2:56267416-56267435 None:intergenic 35.0%
CTATATGCTTGAGAGAGATA+GGG - chr1_2:56267417-56267436 None:intergenic 35.0%
GGATATGATAGACAAAACAC+TGG + chr1_2:56267475-56267494 Msa0078610:CDS 35.0%
ATAGACAAAACACTGGATGA+AGG + chr1_2:56267482-56267501 Msa0078610:CDS 35.0%
CATTTAAACGAATTGGATCC+AGG + chr1_2:56267510-56267529 Msa0078610:CDS 35.0%
ATTAAGAGCCCAACTATTGA+TGG - chr1_2:56267756-56267775 None:intergenic 35.0%
! GGTAGTTGGTATTTCATTTC+AGG - chr1_2:56267784-56267803 None:intergenic 35.0%
ATATACGGTCAAACTGAATG+AGG - chr1_2:56267809-56267828 None:intergenic 35.0%
!!! TTGTCGTTGATTTTGTGTTC+AGG + chr1_2:56267864-56267883 Msa0078610:intron 35.0%
!!! TGTCGTTGATTTTGTGTTCA+GGG + chr1_2:56267865-56267884 Msa0078610:intron 35.0%
! GTGCTATTGGAAATAAGGTA+GGG + chr1_2:56267954-56267973 Msa0078610:CDS 35.0%
!! GATTTTAGGTGTAGTGGAAA+TGG - chr1_2:56268221-56268240 None:intergenic 35.0%
AACCTCTTAAATACAACACC+TGG + chr1_2:56268750-56268769 Msa0078610:CDS 35.0%
! TACCAGGTGTTGTATTTAAG+AGG - chr1_2:56268755-56268774 None:intergenic 35.0%
AACAGTAATAGACAGAGGAA+AGG - chr1_2:56268778-56268797 None:intergenic 35.0%
TGAGAAACAGTAATAGACAG+AGG - chr1_2:56268783-56268802 None:intergenic 35.0%
TCTTGACCTGTTTATAGATC+TGG + chr1_2:56268824-56268843 Msa0078610:intron 35.0%
!! TTATAGATCTGGCTTGCTAT+TGG + chr1_2:56268835-56268854 Msa0078610:intron 35.0%
ACATTTGTACCACGAAACAT+TGG - chr1_2:56268896-56268915 None:intergenic 35.0%
GCAGACATGATTGTATTTCT+TGG + chr1_2:56269036-56269055 Msa0078610:CDS 35.0%
!! CTTTGATTGGCTTAGAGAAA+GGG + chr1_2:56269125-56269144 Msa0078610:CDS 35.0%
TGTCGTTCAAACTTGTATGT+GGG - chr1_2:56269222-56269241 None:intergenic 35.0%
! TCTCTGAAAACTGAACTTGA+AGG + chr1_2:56269302-56269321 Msa0078610:intron 35.0%
! CTCTGAAAACTGAACTTGAA+GGG + chr1_2:56269303-56269322 Msa0078610:intron 35.0%
! GATTTTCACTGTTCTCTTCA+TGG + chr1_2:56269488-56269507 Msa0078610:intron 35.0%
ATCAAGTGTCTTTCACGTAT+TGG - chr1_2:56269742-56269761 None:intergenic 35.0%
!! TATTTTGAAGGGTATGACTC+TGG + chr1_2:56269776-56269795 Msa0078610:intron 35.0%
ATACAAAATTCTGTCACACC+AGG - chr1_2:56269822-56269841 None:intergenic 35.0%
TTTGGTTGCTGAATGCAATT+TGG + chr1_2:56269859-56269878 Msa0078610:CDS 35.0%
GATCAAAATACCCTACCATA+AGG + chr1_2:56269952-56269971 Msa0078610:intron 35.0%
TAATACGCACAAAGTCCTTA+TGG - chr1_2:56269970-56269989 None:intergenic 35.0%
CACACACATATGCATAAAAG+AGG + chr1_2:56270084-56270103 Msa0078610:intron 35.0%
ATGTACTAATGAATCCCAAC+AGG - chr1_2:56270137-56270156 None:intergenic 35.0%
!!! CAAGTTGGCTTGGAAAATTT+TGG + chr1_2:56270278-56270297 Msa0078610:intron 35.0%
! ACTTTGCCGTACTTTTATTG+TGG + chr1_2:56270305-56270324 Msa0078610:intron 35.0%
! CTTTGCCGTACTTTTATTGT+GGG + chr1_2:56270306-56270325 Msa0078610:intron 35.0%
! TGGAGTTTTTGTGATGTGTA+GGG - chr1_2:56270431-56270450 None:intergenic 35.0%
! ATGGAGTTTTTGTGATGTGT+AGG - chr1_2:56270432-56270451 None:intergenic 35.0%
TTGACAATGTCACATTGACA+TGG - chr1_2:56270451-56270470 None:intergenic 35.0%
TCAATGTGACATTGTCAAAG+CGG + chr1_2:56270453-56270472 Msa0078610:intron 35.0%
TACGCAAAATTAATGTGTCC+TGG - chr1_2:56270931-56270950 None:intergenic 35.0%
!! TAAAGCAAATTTTGGCATGG+CGG - chr1_2:56271222-56271241 None:intergenic 35.0%
TGAGATCTACACATTTAAGG+AGG + chr1_2:56271366-56271385 Msa0078610:intron 35.0%
AAATATATCGGGGAGTAAGT+TGG + chr1_2:56271500-56271519 Msa0078610:intron 35.0%
ATGCAGTCAATGTGAAAGAT+AGG + chr1_2:56271598-56271617 Msa0078610:intron 35.0%
TGACTGCTGATCAAATTGAA+CGG - chr1_2:56271709-56271728 None:intergenic 35.0%
CAAAACATCATACAGATGTG+TGG + chr1_2:56271727-56271746 Msa0078610:intron 35.0%
ATCATATGGTGCATTGCAAA+GGG - chr1_2:56271923-56271942 None:intergenic 35.0%
TATCATATGGTGCATTGCAA+AGG - chr1_2:56271924-56271943 None:intergenic 35.0%
AAGACCAGATCAGATTATTG+AGG + chr1_2:56271992-56272011 Msa0078610:CDS 35.0%
GATACCTCAATAATCTGATC+TGG - chr1_2:56271999-56272018 None:intergenic 35.0%
!! ATGGTGTTGTACAAAACTCT+TGG + chr1_2:56272060-56272079 Msa0078610:CDS 35.0%
! AACCAATTGACTCAACCAAA+CGG + chr1_2:56272197-56272216 Msa0078610:CDS 35.0%
TCAAACGTTGGAAATCAGAT+CGG - chr1_2:56272253-56272272 None:intergenic 35.0%
CAAATGAATTGCTCAAACGT+TGG - chr1_2:56272265-56272284 None:intergenic 35.0%
TTGTGGTTGAACTTGAATCA+CGG + chr1_2:56272493-56272512 Msa0078610:three_prime_UTR 35.0%
!!! GAGCTCCTTTTGGAATTAAA+TGG - chr1_2:56272574-56272593 None:intergenic 35.0%
! AGGTTAAATTGAGCTCCTTT+TGG - chr1_2:56272584-56272603 None:intergenic 35.0%
TTCCCTTTCAATTGTAGCTT+CGG - chr1_2:56272635-56272654 None:intergenic 35.0%
AATTGAAAGGGAAAATCCAG+TGG + chr1_2:56272642-56272661 Msa0078610:three_prime_UTR 35.0%
CTAGCATCTCATTATTTGCT+TGG + chr1_2:56272752-56272771 Msa0078610:three_prime_UTR 35.0%
!!! AGTGACACTCATTTTGAAAC+GGG - chr1_2:56272864-56272883 None:intergenic 35.0%
! GGGAGTATAAAAAGACCATA+TGG + chr1_2:56273130-56273149 Msa0078610:intron 35.0%
AAACGCGCGGAAAGAATATA+GGG - chr1_2:56262743-56262762 None:intergenic 40.0%
!!! AAGATGAAGAAGCGTCGTTT+TGG - chr1_2:56262787-56262806 None:intergenic 40.0%
! AAAGTGCGTTGTTGTTGTTG+AGG - chr1_2:56262827-56262846 None:intergenic 40.0%
GGTGGAATGAATAGAATTGG+AGG - chr1_2:56262903-56262922 None:intergenic 40.0%
AGATATTGAGTTTACGGTCG+AGG - chr1_2:56262955-56262974 None:intergenic 40.0%
GGTCGGAGATATTGAGTTTA+CGG - chr1_2:56262961-56262980 None:intergenic 40.0%
TTAAAGATCTGTATGCGTCG+TGG + chr1_2:56263194-56263213 Msa0078610:CDS 40.0%
ATTTGTTTGGTTGCGGATGA+AGG + chr1_2:56263298-56263317 Msa0078610:CDS 40.0%
TTTGTTTGGTTGCGGATGAA+GGG + chr1_2:56263299-56263318 Msa0078610:CDS 40.0%
GAAGATTCGCTGTTGGTATA+TGG + chr1_2:56263354-56263373 Msa0078610:CDS 40.0%
CGTACAATACACCAAATGGT+GGG - chr1_2:56263958-56263977 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr1_2:56263989-56264008 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr1_2:56263990-56264009 None:intergenic 40.0%
AACTTATGGTCTGTTTGGGA+GGG - chr1_2:56264080-56264099 None:intergenic 40.0%
AAACTTATGGTCTGTTTGGG+AGG - chr1_2:56264081-56264100 None:intergenic 40.0%
ATCTATTCATCTGACAGAGG+AGG + chr1_2:56264426-56264445 Msa0078610:CDS 40.0%
TGTAGCCATTTGTAGATAGC+TGG - chr1_2:56264504-56264523 None:intergenic 40.0%
! TTTTTCATATCCTGTGGTCG+CGG + chr1_2:56264722-56264741 Msa0078610:intron 40.0%
TAAATATAATCCGCGACCAC+AGG - chr1_2:56264735-56264754 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+GGG + chr1_2:56264772-56264791 Msa0078610:intron 40.0%
AATCCTTAACAAGTGCCCTT+AGG + chr1_2:56264912-56264931 Msa0078610:intron 40.0%
CTTGCTAACAAGTGACCTAA+GGG - chr1_2:56264930-56264949 None:intergenic 40.0%
TCTTGCTAACAAGTGACCTA+AGG - chr1_2:56264931-56264950 None:intergenic 40.0%
!! CTGTATACTTTTCAAGCCCA+AGG + chr1_2:56265462-56265481 Msa0078610:intron 40.0%
TACATCTCTAGCACACATCT+CGG - chr1_2:56265497-56265516 None:intergenic 40.0%
!!! GATTTTACGCTTGGTGTAAG+TGG - chr1_2:56265660-56265679 None:intergenic 40.0%
CTTGACATACTTACGTCCTT+TGG + chr1_2:56265679-56265698 Msa0078610:intron 40.0%
CATTTATGGAGAGCTACCAA+AGG - chr1_2:56265698-56265717 None:intergenic 40.0%
AAAAAGGACACGAGAGATTC+AGG - chr1_2:56266127-56266146 None:intergenic 40.0%
GCTAGTGCTTATTCATGTAC+AGG + chr1_2:56266322-56266341 Msa0078610:intron 40.0%
! AGTCTGATCGATTCTCCATT+TGG - chr1_2:56266392-56266411 None:intergenic 40.0%
CCTAGAACTTGAAACAAGGT+CGG - chr1_2:56266439-56266458 None:intergenic 40.0%
GACAGAAACCAAAGTTCCAT+TGG + chr1_2:56266462-56266481 Msa0078610:CDS 40.0%
GAAAGAACCCAATGGAACTT+TGG - chr1_2:56266473-56266492 None:intergenic 40.0%
AACATTGAACAGCAAATGGG+TGG - chr1_2:56266689-56266708 None:intergenic 40.0%
ATTTGGGTAGGTTATGTGTC+TGG + chr1_2:56266729-56266748 Msa0078610:CDS 40.0%
! GTATTCACATTGGCTAACCA+CGG + chr1_2:56266846-56266865 Msa0078610:CDS 40.0%
AAAATGCTATCAAGAGGTCC+TGG - chr1_2:56266900-56266919 None:intergenic 40.0%
TAAAGATCTTGAGTGGCACT+TGG + chr1_2:56266970-56266989 Msa0078610:CDS 40.0%
CTCAAGATTCCCTTACTTCA+TGG + chr1_2:56267015-56267034 Msa0078610:CDS 40.0%
AGAACCTAGCCATGAAGTAA+GGG - chr1_2:56267027-56267046 None:intergenic 40.0%
!! ATGTTGGCCTTGTTGTTGTT+GGG + chr1_2:56267057-56267076 Msa0078610:CDS 40.0%
TGATAGGTAAGAGTGAGAAC+AGG - chr1_2:56267321-56267340 None:intergenic 40.0%
ATGTGGGTAAGGTACATGAT+AGG - chr1_2:56267337-56267356 None:intergenic 40.0%
ACTGTGTATGTATGTGGGTA+AGG - chr1_2:56267348-56267367 None:intergenic 40.0%
CCTATATGCTTGAGAGAGAT+AGG - chr1_2:56267418-56267437 None:intergenic 40.0%
CCTATCTCTCTCAAGCATAT+AGG + chr1_2:56267415-56267434 Msa0078610:intron 40.0%
TCTCTCTCAAGCATATAGGT+AGG + chr1_2:56267419-56267438 Msa0078610:intron 40.0%
TCACGTGTATTTCTCCACAT+AGG - chr1_2:56267572-56267591 None:intergenic 40.0%
ATCGATGCACCATCAATAGT+TGG + chr1_2:56267744-56267763 Msa0078610:intron 40.0%
TCGATGCACCATCAATAGTT+GGG + chr1_2:56267745-56267764 Msa0078610:intron 40.0%
! TTTTCGAAGTTCTGCCTTGT+TGG + chr1_2:56267833-56267852 Msa0078610:intron 40.0%
CGACAATTGAAGAACCAACA+AGG - chr1_2:56267850-56267869 None:intergenic 40.0%
! TGGACGTGCTATTGGAAATA+AGG + chr1_2:56267949-56267968 Msa0078610:CDS 40.0%
! CGTGCTATTGGAAATAAGGT+AGG + chr1_2:56267953-56267972 Msa0078610:CDS 40.0%
! GATCCGACAGTTTTTCTTGT+AGG + chr1_2:56268076-56268095 Msa0078610:intron 40.0%
TAGCTCAACTGTGATTGAAC+CGG - chr1_2:56268395-56268414 None:intergenic 40.0%
!!! GAGTTAACCAGACTGGTTTT+AGG + chr1_2:56268432-56268451 Msa0078610:intron 40.0%
!!! TTAACCAGACTGGTTTTAGG+TGG + chr1_2:56268435-56268454 Msa0078610:intron 40.0%
TAAACCACCTAAAACCAGTC+TGG - chr1_2:56268442-56268461 None:intergenic 40.0%
TGGAAATTGATTGTCTCACC+AGG + chr1_2:56268584-56268603 Msa0078610:intron 40.0%
GGAAATTGATTGTCTCACCA+GGG + chr1_2:56268585-56268604 Msa0078610:intron 40.0%
TGAGGGTTAGAGTGTATGAT+CGG + chr1_2:56268619-56268638 Msa0078610:CDS 40.0%
GTCGACTAAAGGACATTGTT+CGG - chr1_2:56268725-56268744 None:intergenic 40.0%
AGCAAGCCAGATCTATAAAC+AGG - chr1_2:56268833-56268852 None:intergenic 40.0%
GCTTCTATTCCAATGTTTCG+TGG + chr1_2:56268884-56268903 Msa0078610:CDS 40.0%
!! GAAGCACTGATTCTTGAGAT+TGG + chr1_2:56268976-56268995 Msa0078610:intron 40.0%
!! GCTTTGATTGGCTTAGAGAA+AGG + chr1_2:56269124-56269143 Msa0078610:CDS 40.0%
! GTGTCGTTCAAACTTGTATG+TGG - chr1_2:56269223-56269242 None:intergenic 40.0%
ACACACACACACACACAAAT+TGG + chr1_2:56269279-56269298 Msa0078610:intron 40.0%
TTCACTGTTCTCTTCATGGA+TGG + chr1_2:56269492-56269511 Msa0078610:intron 40.0%
GCAATACTGAAGAGACAACA+GGG - chr1_2:56269889-56269908 None:intergenic 40.0%
TGCAATACTGAAGAGACAAC+AGG - chr1_2:56269890-56269909 None:intergenic 40.0%
CTCTGACCCCTTTATTGATA+AGG + chr1_2:56270030-56270049 Msa0078610:intron 40.0%
GATCAGATTCAGAACCTGTT+GGG + chr1_2:56270120-56270139 Msa0078610:intron 40.0%
! TTTGCTAGAACAAGTTGGCT+TGG + chr1_2:56270268-56270287 Msa0078610:intron 40.0%
! GGAGTTTTTGTGATGTGTAG+GGG - chr1_2:56270430-56270449 None:intergenic 40.0%
CAAAGCGGCAATAGATGTTA+AGG + chr1_2:56270468-56270487 Msa0078610:intron 40.0%
! ATGTTTCCGAAAAGCATGAG+TGG + chr1_2:56270638-56270657 Msa0078610:intron 40.0%
CTCGAGTAGATGAACCAATA+CGG + chr1_2:56270792-56270811 Msa0078610:CDS 40.0%
CAAAAGAACCTCTCAACTGA+TGG - chr1_2:56271042-56271061 None:intergenic 40.0%
! CATCAGTTGAGAGGTTCTTT+TGG + chr1_2:56271040-56271059 Msa0078610:CDS 40.0%
AATATTACCTCAAGCCACCT+AGG - chr1_2:56271070-56271089 None:intergenic 40.0%
GTTTACAATGGACCTGTGTA+GGG - chr1_2:56271404-56271423 None:intergenic 40.0%
TGTTTACAATGGACCTGTGT+AGG - chr1_2:56271405-56271424 None:intergenic 40.0%
! TCACATTGACTGCATGAAAG+TGG - chr1_2:56271593-56271612 None:intergenic 40.0%
! GGTGTTATGTCTGCATCATA+TGG + chr1_2:56271763-56271782 Msa0078610:intron 40.0%
! GGTCTTATAATACCAGTTGC+AGG - chr1_2:56271978-56271997 None:intergenic 40.0%
TCATGAGGAATTTCAGACTC+AGG + chr1_2:56272025-56272044 Msa0078610:CDS 40.0%
!! ACTCAGGAAGAGTTTGTTGA+TGG + chr1_2:56272041-56272060 Msa0078610:CDS 40.0%
CAAAATTGCTTCCTTGTCTC+TGG - chr1_2:56272096-56272115 None:intergenic 40.0%
! CACCTTAATTGGTGCTTCAA+GGG - chr1_2:56272319-56272338 None:intergenic 40.0%
! TCACCTTAATTGGTGCTTCA+AGG - chr1_2:56272320-56272339 None:intergenic 40.0%
! TTCTTTTCATAGGGAGCTTG+TGG + chr1_2:56272476-56272495 Msa0078610:intron 40.0%
GTACAGAGAAAGCAAATGCA+AGG + chr1_2:56272529-56272548 Msa0078610:three_prime_UTR 40.0%
AGCCGAAGCTACAATTGAAA+GGG + chr1_2:56272630-56272649 Msa0078610:three_prime_UTR 40.0%
GAAAATCCAGTGGCATGTTA+GGG + chr1_2:56272652-56272671 Msa0078610:three_prime_UTR 40.0%
!!! TGACACTCATTTTGAAACGG+GGG - chr1_2:56273109-56273128 None:intergenic 40.0%
!!! GTGACACTCATTTTGAAACG+GGG - chr1_2:56272863-56272882 None:intergenic 40.0%
!! ATGAGTGTCACTTTAGGCTT+TGG + chr1_2:56272872-56272891 Msa0078610:intron 40.0%
!!! TGACACTCATTTTGAAACGG+AGG + chr1_2:56273109-56273128 Msa0078610:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_2:56273110-56273129 Msa0078610:intron 40.0%
AAAAAATCCGACGACGTTTG+TGG + chr1_2:56273166-56273185 Msa0078610:three_prime_UTR 40.0%
ATACCTTCTGTCCAAACGCT+CGG + chr1_2:56262667-56262686 Msa0078610:five_prime_UTR 45.0%
GAAACGCGCGGAAAGAATAT+AGG - chr1_2:56262744-56262763 None:intergenic 45.0%
ATCCATTAGATCGAAACGCG+CGG - chr1_2:56262756-56262775 None:intergenic 45.0%
GTCGTTGGAAGAAGAAGAAG+AGG - chr1_2:56262864-56262883 None:intergenic 45.0%
ATTGGAGCATGCAATCGAGA+CGG - chr1_2:56262931-56262950 None:intergenic 45.0%
TGAGTTTACGGTCGAGGAAT+TGG - chr1_2:56262949-56262968 None:intergenic 45.0%
GAGAGGAGGTTTGAAGATTC+CGG - chr1_2:56263023-56263042 None:intergenic 45.0%
TAATTCGAGAGAAGGAGGAC+GGG - chr1_2:56263065-56263084 None:intergenic 45.0%
GTAATTCGAGAGAAGGAGGA+CGG - chr1_2:56263066-56263085 None:intergenic 45.0%
! GTCCAAACCGATTCACGAAA+CGG - chr1_2:56263268-56263287 None:intergenic 45.0%
!! ATGAAGGGAATAGGTTGGTG+TGG + chr1_2:56263314-56263333 Msa0078610:CDS 45.0%
TGTGGAGTGGACATAGAGAT+GGG + chr1_2:56263332-56263351 Msa0078610:CDS 45.0%
TTATCTTGGCAAGCTCATCG+TGG + chr1_2:56263406-56263425 Msa0078610:CDS 45.0%
GCGTACAATACACCAAATGG+TGG - chr1_2:56263959-56263978 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr1_2:56263962-56263981 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr1_2:56263994-56264013 Msa0078610:intron 45.0%
GTTGTTGTCATGTGACCGTA+AGG - chr1_2:56264034-56264053 None:intergenic 45.0%
ACTTATGGTCTGTTTGGGAG+GGG - chr1_2:56264079-56264098 None:intergenic 45.0%
GATTTGATCTAGGGGATCTG+TGG + chr1_2:56264350-56264369 Msa0078610:intron 45.0%
!! GATTTTTCAACAGCCTCCCA+AGG - chr1_2:56264409-56264428 None:intergenic 45.0%
TTCATCTGACAGAGGAGGAA+AGG + chr1_2:56264431-56264450 Msa0078610:CDS 45.0%
!! AGAGATCCTACGTTGACTTG+AGG + chr1_2:56264476-56264495 Msa0078610:CDS 45.0%
AGGAGCCAGCTATCTACAAA+TGG + chr1_2:56264496-56264515 Msa0078610:CDS 45.0%
GAAATGCTAACAAGTGCCCT+TGG + chr1_2:56264771-56264790 Msa0078610:intron 45.0%
AATGCTAACAAGTGCCCTTG+GGG + chr1_2:56264773-56264792 Msa0078610:intron 45.0%
CTTCTTATCAAGTGCCCCAA+GGG - chr1_2:56264790-56264809 None:intergenic 45.0%
ACTTCTTATCAAGTGCCCCA+AGG - chr1_2:56264791-56264810 None:intergenic 45.0%
!! TGACCTAAGGGCACTTGTTA+AGG - chr1_2:56264918-56264937 None:intergenic 45.0%
TAGCACACATCTCGGACAAA+AGG - chr1_2:56265489-56265508 None:intergenic 45.0%
AGCATCCACGTAACAGCTTA+TGG + chr1_2:56265524-56265543 Msa0078610:intron 45.0%
AACAGCCATAAGCTGTTACG+TGG - chr1_2:56265532-56265551 None:intergenic 45.0%
CAAGAAGCAAGTTAGACCCT+AGG - chr1_2:56265994-56266013 None:intergenic 45.0%
GCCTTCAATGCAAGACTTTC+CGG + chr1_2:56266413-56266432 Msa0078610:CDS 45.0%
!! CCGACCTTGTTTCAAGTTCT+AGG + chr1_2:56266436-56266455 Msa0078610:CDS 45.0%
CGCTCACGTAATGCCATAAT+GGG + chr1_2:56266495-56266514 Msa0078610:CDS 45.0%
GCTCACGTAATGCCATAATG+GGG + chr1_2:56266496-56266515 Msa0078610:CDS 45.0%
CTCACGTAATGCCATAATGG+GGG + chr1_2:56266497-56266516 Msa0078610:CDS 45.0%
! GAGCCTTTGGAGATGAGAAT+CGG + chr1_2:56266553-56266572 Msa0078610:CDS 45.0%
TCTCCGATTCTCATCTCCAA+AGG - chr1_2:56266559-56266578 None:intergenic 45.0%
! AGGATATTCAAGTGGCTTGC+TGG + chr1_2:56266620-56266639 Msa0078610:CDS 45.0%
TGGAAATGGCAATCGCATAC+AGG + chr1_2:56266653-56266672 Msa0078610:CDS 45.0%
TTATGTGTCTGGCATTGTCC+AGG + chr1_2:56266740-56266759 Msa0078610:CDS 45.0%
ACCTGAAGGGTAACCTGATA+GGG + chr1_2:56266769-56266788 Msa0078610:CDS 45.0%
TTGAGTGGCACTTGGAATGT+TGG + chr1_2:56266978-56266997 Msa0078610:CDS 45.0%
GATTCCCTTACTTCATGGCT+AGG + chr1_2:56267020-56267039 Msa0078610:CDS 45.0%
CAGAACCTAGCCATGAAGTA+AGG - chr1_2:56267028-56267047 None:intergenic 45.0%
TACTTCATGGCTAGGTTCTG+TGG + chr1_2:56267028-56267047 Msa0078610:CDS 45.0%
AACAACAAGGCCAACATCTG+AGG - chr1_2:56267054-56267073 None:intergenic 45.0%
!! GATGTTGGCCTTGTTGTTGT+TGG + chr1_2:56267056-56267075 Msa0078610:CDS 45.0%
CTTGCAACCCAACAACAACA+AGG - chr1_2:56267067-56267086 None:intergenic 45.0%
! TGTTGTTGTTGGGTTGCAAG+AGG + chr1_2:56267067-56267086 Msa0078610:CDS 45.0%
TGGGTTGCAAGAGGTTGAAA+TGG + chr1_2:56267076-56267095 Msa0078610:CDS 45.0%
GGGTTGCAAGAGGTTGAAAT+GGG + chr1_2:56267077-56267096 Msa0078610:CDS 45.0%
!! GGGGGTGTTATGAACAAGAA+AGG - chr1_2:56267390-56267409 None:intergenic 45.0%
TTGAGAGAGATAGGGGTTAG+GGG - chr1_2:56267409-56267428 None:intergenic 45.0%
CTTGAGAGAGATAGGGGTTA+GGG - chr1_2:56267410-56267429 None:intergenic 45.0%
CTCAAGCATATAGGTAGGAC+TGG + chr1_2:56267424-56267443 Msa0078610:intron 45.0%
AAGCATATAGGTAGGACTGG+AGG + chr1_2:56267427-56267446 Msa0078610:intron 45.0%
AGCATATAGGTAGGACTGGA+GGG + chr1_2:56267428-56267447 Msa0078610:intron 45.0%
AACTGAATGAGGACGGTAGT+TGG - chr1_2:56267798-56267817 None:intergenic 45.0%
ACGGTCAAACTGAATGAGGA+CGG - chr1_2:56267805-56267824 None:intergenic 45.0%
ACTTCATGTTGGGGATGTTG+AGG + chr1_2:56267904-56267923 Msa0078610:CDS 45.0%
CTATGCTTTGCAAGCTGGTT+TGG + chr1_2:56267993-56268012 Msa0078610:intron 45.0%
GCTGCACATTTAGATGCAGT+TGG + chr1_2:56268669-56268688 Msa0078610:CDS 45.0%
!! GAGGTTTGTTGGTCGACTAA+AGG - chr1_2:56268736-56268755 None:intergenic 45.0%
!! ATAGACAGAGGAAAGGTACC+AGG - chr1_2:56268771-56268790 None:intergenic 45.0%
AAGTTCCAGCTGCAACAGAA+AGG - chr1_2:56268862-56268881 None:intergenic 45.0%
AGGGATACCTGAGTTATCTG+AGG + chr1_2:56269014-56269033 Msa0078610:CDS 45.0%
ATGTCTGCCTCAGATAACTC+AGG - chr1_2:56269024-56269043 None:intergenic 45.0%
TTCGAGCTGAAATGGAAGCT+GGG + chr1_2:56269154-56269173 Msa0078610:CDS 45.0%
CGTTCAAACTTGTATGTGGG+AGG - chr1_2:56269219-56269238 None:intergenic 45.0%
AAGTTTGAACGACACCAAGC+TGG + chr1_2:56269228-56269247 Msa0078610:CDS 45.0%
TGTGTGTGTGTGTGTGTGTT+GGG - chr1_2:56269270-56269289 None:intergenic 45.0%
CATTATTACGAGGTGAGGCT+GGG - chr1_2:56269469-56269488 None:intergenic 45.0%
TCATTATTACGAGGTGAGGC+TGG - chr1_2:56269470-56269489 None:intergenic 45.0%
TTGCTGAAATTGTGGGGTTG+AGG + chr1_2:56269525-56269544 Msa0078610:intron 45.0%
TGAAATTGTGGGGTTGAGGT+GGG + chr1_2:56269529-56269548 Msa0078610:intron 45.0%
TTTGGGTGCTTGCAACTTCA+TGG + chr1_2:56269608-56269627 Msa0078610:intron 45.0%
AAATTCTGTCACACCAGGCA+GGG - chr1_2:56269817-56269836 None:intergenic 45.0%
AAAATTCTGTCACACCAGGC+AGG - chr1_2:56269818-56269837 None:intergenic 45.0%
TCGTGATAGTCGCTCTTCTT+TGG + chr1_2:56269841-56269860 Msa0078610:CDS 45.0%
CGCACAAAGTCCTTATGGTA+GGG - chr1_2:56269965-56269984 None:intergenic 45.0%
ACGCACAAAGTCCTTATGGT+AGG - chr1_2:56269966-56269985 None:intergenic 45.0%
CGATCAGATTCAGAACCTGT+TGG + chr1_2:56270119-56270138 Msa0078610:intron 45.0%
! GTGCTTCCACTCATGCTTTT+CGG - chr1_2:56270647-56270666 None:intergenic 45.0%
ACTATCTGTGACATCCATGC+AGG - chr1_2:56270732-56270751 None:intergenic 45.0%
AGATGAACCAATACGGAGAC+AGG + chr1_2:56270799-56270818 Msa0078610:CDS 45.0%
TACTGTACTGGAGGATCAGA+AGG + chr1_2:56271009-56271028 Msa0078610:CDS 45.0%
GCAACAAACCATCAGTTGAG+AGG + chr1_2:56271031-56271050 Msa0078610:CDS 45.0%
! GAGGTTCTTTTGGATTGCCT+AGG + chr1_2:56271050-56271069 Msa0078610:CDS 45.0%
! GTTCTTTTGGATTGCCTAGG+TGG + chr1_2:56271053-56271072 Msa0078610:CDS 45.0%
AAGTTGAAGAAGCCCTACAC+AGG + chr1_2:56271389-56271408 Msa0078610:intron 45.0%
TAGTGGAGATAAGACTGCTG+AGG + chr1_2:56271444-56271463 Msa0078610:intron 45.0%
! TTTTGGTCAGCTCACTCTTG+TGG + chr1_2:56271666-56271685 Msa0078610:intron 45.0%
ATGATGCAGACATAACACCC+CGG - chr1_2:56271762-56271781 None:intergenic 45.0%
ATTCAGGTAAGTCCTGCAAC+TGG + chr1_2:56271963-56271982 Msa0078610:intron 45.0%
! TGAGGTATCAGTGCATCATG+AGG + chr1_2:56272010-56272029 Msa0078610:CDS 45.0%
AGCCGTTTGGTTGAGTCAAT+TGG - chr1_2:56272202-56272221 None:intergenic 45.0%
ATCGGTGAAGTACACTTCCT+TGG - chr1_2:56272235-56272254 None:intergenic 45.0%
GGCTATGCAATTTATGCAGC+TGG - chr1_2:56272298-56272317 None:intergenic 45.0%
! AGCCCTTGAAGCACCAATTA+AGG + chr1_2:56272314-56272333 Msa0078610:exon 45.0%
GTAGCTTCGGCTGTTTAGTA+TGG - chr1_2:56272622-56272641 None:intergenic 45.0%
CAGCCGAAGCTACAATTGAA+AGG + chr1_2:56272629-56272648 Msa0078610:three_prime_UTR 45.0%
GGAAAATCCAGTGGCATGTT+AGG + chr1_2:56272651-56272670 Msa0078610:three_prime_UTR 45.0%
!!! GACACTCATTTTGAAACGGG+GGG - chr1_2:56272861-56272880 None:intergenic 45.0%
!! AAAAAAAATAAAAAATATTG+GGG - chr1_2:56268476-56268495 None:intergenic 5.0%
AAATGGAGAGACCGAGCGTT+TGG - chr1_2:56262681-56262700 None:intergenic 50.0%
TTCCGCGCGTTTCGATCTAA+TGG + chr1_2:56262751-56262770 Msa0078610:exon 50.0%
!!! GAAGCGTCGTTTTGGTGAAG+TGG - chr1_2:56262779-56262798 None:intergenic 50.0%
TGTTGAGGAGTAGACGACAG+TGG - chr1_2:56262812-56262831 None:intergenic 50.0%
TGAAACGTCGTCGTTGTCGT+TGG - chr1_2:56262879-56262898 None:intergenic 50.0%
TGGCGATGAATTCAGGGAGA+GGG - chr1_2:56262988-56263007 None:intergenic 50.0%
TTGGCGATGAATTCAGGGAG+AGG - chr1_2:56262989-56263008 None:intergenic 50.0%
CTCCCTGAATTCATCGCCAA+AGG + chr1_2:56262989-56263008 Msa0078610:CDS 50.0%
CGCCTTTGGCGATGAATTCA+GGG - chr1_2:56262994-56263013 None:intergenic 50.0%
CCTGAATTCATCGCCAAAGG+CGG + chr1_2:56262992-56263011 Msa0078610:CDS 50.0%
GGACGTAATTCGAGAGAAGG+AGG - chr1_2:56263070-56263089 None:intergenic 50.0%
TGGGGACGTAATTCGAGAGA+AGG - chr1_2:56263073-56263092 None:intergenic 50.0%
CCAATCTGAGTCTCGCGTAA+GGG - chr1_2:56263097-56263116 None:intergenic 50.0%
TCCAATCTGAGTCTCGCGTA+AGG - chr1_2:56263098-56263117 None:intergenic 50.0%
TACGCGAGACTCAGATTGGA+CGG + chr1_2:56263098-56263117 Msa0078610:CDS 50.0%
TTGCGACCGAGTCGCAATTA+TGG + chr1_2:56263137-56263156 Msa0078610:CDS 50.0%
CGCAGACCATAATTGCGACT+CGG - chr1_2:56263146-56263165 None:intergenic 50.0%
TTATGGTCTGCGACTGAACG+TGG + chr1_2:56263154-56263173 Msa0078610:CDS 50.0%
GATCTGTATGCGTCGTGGTA+CGG + chr1_2:56263199-56263218 Msa0078610:CDS 50.0%
GAGTGCACCGTTTCGTGAAT+CGG + chr1_2:56263258-56263277 Msa0078610:CDS 50.0%
CACCGTTTCGTGAATCGGTT+TGG + chr1_2:56263263-56263282 Msa0078610:CDS 50.0%
!! TGAATCGGTTTGGACTTCGC+CGG + chr1_2:56263273-56263292 Msa0078610:CDS 50.0%
TCCGCAACCAAACAAATCGC+CGG - chr1_2:56263295-56263314 None:intergenic 50.0%
TGGTTGCGGATGAAGGGAAT+AGG + chr1_2:56263305-56263324 Msa0078610:CDS 50.0%
TGCGGATGAAGGGAATAGGT+TGG + chr1_2:56263309-56263328 Msa0078610:CDS 50.0%
GTGTGGAGTGGACATAGAGA+TGG + chr1_2:56263331-56263350 Msa0078610:CDS 50.0%
GAGATGGGAAGATTCGCTGT+TGG + chr1_2:56263347-56263366 Msa0078610:CDS 50.0%
GACTTGAACCCGTGACCTTA+CGG + chr1_2:56264016-56264035 Msa0078610:intron 50.0%
TCATGTGACCGTAAGGTCAC+GGG - chr1_2:56264027-56264046 None:intergenic 50.0%
GTCATGTGACCGTAAGGTCA+CGG - chr1_2:56264028-56264047 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr1_2:56264050-56264069 Msa0078610:intron 50.0%
TGATCTAGGGGATCTGTGGT+CGG + chr1_2:56264354-56264373 Msa0078610:intron 50.0%
TACCACTAAGAGAGGCTGCT+AGG - chr1_2:56264632-56264651 None:intergenic 50.0%
ATCTCGGACAAAAGGCCCTT+GGG - chr1_2:56265481-56265500 None:intergenic 50.0%
GCCGGAAAGTCTTGCATTGA+AGG - chr1_2:56266417-56266436 None:intergenic 50.0%
GAACTTGAAACAAGGTCGGC+CGG - chr1_2:56266435-56266454 None:intergenic 50.0%
!! TGAGCGCTGAAAGAACCCAA+TGG - chr1_2:56266481-56266500 None:intergenic 50.0%
GCGCTCACGTAATGCCATAA+TGG + chr1_2:56266494-56266513 Msa0078610:CDS 50.0%
!! AAGTGGCTTGCTGGTGCAAT+GGG + chr1_2:56266629-56266648 Msa0078610:CDS 50.0%
CTGGTGCAATGGGATGGAAA+TGG + chr1_2:56266639-56266658 Msa0078610:CDS 50.0%
GTCTGGCATTGTCCAGGTAT+TGG + chr1_2:56266746-56266765 Msa0078610:CDS 50.0%
!! TGTCCAGGTATTGGACCTGA+AGG + chr1_2:56266755-56266774 Msa0078610:CDS 50.0%
!! GTCCAGGTATTGGACCTGAA+GGG + chr1_2:56266756-56266775 Msa0078610:CDS 50.0%
TACCCTTCAGGTCCAATACC+TGG - chr1_2:56266761-56266780 None:intergenic 50.0%
GACCTGAAGGGTAACCTGAT+AGG + chr1_2:56266768-56266787 Msa0078610:CDS 50.0%
CCTGAAGGGTAACCTGATAG+GGG + chr1_2:56266770-56266789 Msa0078610:CDS 50.0%
CTGAAGGGTAACCTGATAGG+GGG + chr1_2:56266771-56266790 Msa0078610:CDS 50.0%
! TTCACATTGGCTAACCACGG+TGG + chr1_2:56266849-56266868 Msa0078610:CDS 50.0%
GGCACTTGGAATGTTGGACA+AGG + chr1_2:56266984-56267003 Msa0078610:CDS 50.0%
TGAGAGAGATAGGGGTTAGG+GGG - chr1_2:56267408-56267427 None:intergenic 50.0%
GCTTGAGAGAGATAGGGGTT+AGG - chr1_2:56267411-56267430 None:intergenic 50.0%
ATTGGATCCAGGCAACTTGC+AGG + chr1_2:56267521-56267540 Msa0078610:CDS 50.0%
CTGTGTGGTGAGTACCTATG+TGG + chr1_2:56267555-56267574 Msa0078610:intron 50.0%
GTGGAGAAATACACGTGAGC+TGG + chr1_2:56267574-56267593 Msa0078610:intron 50.0%
TCATGTTGGGGATGTTGAGG+CGG + chr1_2:56267907-56267926 Msa0078610:CDS 50.0%
ATAGCACGTCCAAAGCCACA+TGG - chr1_2:56267941-56267960 None:intergenic 50.0%
!! TGTGGCTTTGGACGTGCTAT+TGG + chr1_2:56267941-56267960 Msa0078610:CDS 50.0%
TGCTGCTATGCTTTGCAAGC+TGG + chr1_2:56267988-56268007 Msa0078610:CDS 50.0%
TTGGTCCTTTCTGTTGCAGC+TGG + chr1_2:56268854-56268873 Msa0078610:intron 50.0%
! ATTGGTTTCCAGCCTGCAGA+AGG + chr1_2:56268994-56269013 Msa0078610:intron 50.0%
TTGGTTTCCAGCCTGCAGAA+GGG + chr1_2:56268995-56269014 Msa0078610:intron 50.0%
AACTCAGGTATCCCTTCTGC+AGG - chr1_2:56269009-56269028 None:intergenic 50.0%
GGATCAGCTTCGAGCTGAAA+TGG + chr1_2:56269146-56269165 Msa0078610:CDS 50.0%
CTTCGAGCTGAAATGGAAGC+TGG + chr1_2:56269153-56269172 Msa0078610:CDS 50.0%
TTACTGCTTCACGCATTCCC+TGG - chr1_2:56269188-56269207 None:intergenic 50.0%
TGAACGACACCAAGCTGGTT+TGG + chr1_2:56269233-56269252 Msa0078610:CDS 50.0%
GTGTGTGTGTGTGTGTGTTG+GGG - chr1_2:56269269-56269288 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGT+TGG - chr1_2:56269271-56269290 None:intergenic 50.0%
CTGAAATTGTGGGGTTGAGG+TGG + chr1_2:56269528-56269547 Msa0078610:intron 50.0%
GAAATTGTGGGGTTGAGGTG+GGG + chr1_2:56269530-56269549 Msa0078610:intron 50.0%
GGTGCTTGCAACTTCATGGA+TGG + chr1_2:56269612-56269631 Msa0078610:intron 50.0%
AAAAGAAACGCATCCCTGCC+TGG + chr1_2:56269801-56269820 Msa0078610:CDS 50.0%
GCAGGCTTCGTACCTATTGA+AGG - chr1_2:56270714-56270733 None:intergenic 50.0%
CAATAGGTACGAAGCCTGCA+TGG + chr1_2:56270715-56270734 Msa0078610:intron 50.0%
GTAGAAAAGATGCAGCGCAC+AGG - chr1_2:56270764-56270783 None:intergenic 50.0%
CCAAACTCCTGTCTCCGTAT+TGG - chr1_2:56270809-56270828 None:intergenic 50.0%
CCAATACGGAGACAGGAGTT+TGG + chr1_2:56270806-56270825 Msa0078610:CDS 50.0%
GATGACTGACGAGTGTGTAG+TGG + chr1_2:56271427-56271446 Msa0078610:intron 50.0%
TGGAGATAAGACTGCTGAGG+TGG + chr1_2:56271447-56271466 Msa0078610:intron 50.0%
GAACGGCGCAGCAATAAATG+TGG - chr1_2:56271692-56271711 None:intergenic 50.0%
GTGTGAAGACTCCAGAGACA+AGG + chr1_2:56272082-56272101 Msa0078610:CDS 50.0%
AACAGTGGTGAACACGCACT+CGG - chr1_2:56272163-56272182 None:intergenic 50.0%
TAAAGGGCCACAAACGTCGT+CGG - chr1_2:56273176-56273195 None:intergenic 50.0%
CATGTTGTGACGAACCACGC+TGG - chr1_2:56262631-56262650 None:intergenic 55.0%
AGACCGAGCGTTTGGACAGA+AGG - chr1_2:56262673-56262692 None:intergenic 55.0%
TGAATTCAGGGAGAGGGAGG+TGG - chr1_2:56262982-56263001 None:intergenic 55.0%
CGATGAATTCAGGGAGAGGG+AGG - chr1_2:56262985-56263004 None:intergenic 55.0%
CCGCCTTTGGCGATGAATTC+AGG - chr1_2:56262995-56263014 None:intergenic 55.0%
GAATTCATCGCCAAAGGCGG+CGG + chr1_2:56262995-56263014 Msa0078610:CDS 55.0%
AGGAGGACGGGAAGGATGTA+CGG - chr1_2:56263053-56263072 None:intergenic 55.0%
TGAGTCTCGCGTAAGGGATG+GGG - chr1_2:56263091-56263110 None:intergenic 55.0%
CTGAGTCTCGCGTAAGGGAT+GGG - chr1_2:56263092-56263111 None:intergenic 55.0%
TCTGAGTCTCGCGTAAGGGA+TGG - chr1_2:56263093-56263112 None:intergenic 55.0%
CCCTTACGCGAGACTCAGAT+TGG + chr1_2:56263094-56263113 Msa0078610:CDS 55.0%
!! TTGCGACTCGGTCGCAACAA+TGG - chr1_2:56263134-56263153 None:intergenic 55.0%
TCGTGGTACGGTGGAGAAGT+AGG + chr1_2:56263211-56263230 Msa0078610:CDS 55.0%
TGGTACGGTGGAGAAGTAGG+TGG + chr1_2:56263214-56263233 Msa0078610:CDS 55.0%
GTGGAGAAGTAGGTGGTGTG+AGG + chr1_2:56263221-56263240 Msa0078610:CDS 55.0%
GAAGTAGGTGGTGTGAGGAG+TGG + chr1_2:56263226-56263245 Msa0078610:CDS 55.0%
! GACTTCGCCGGCGATTTGTT+TGG + chr1_2:56263285-56263304 Msa0078610:CDS 55.0%
! GCCGGCGATTTGTTTGGTTG+CGG + chr1_2:56263291-56263310 Msa0078610:CDS 55.0%
!! GGGAATAGGTTGGTGTGGAG+TGG + chr1_2:56263319-56263338 Msa0078610:CDS 55.0%
ACTGAAGCTCCCGCATATGC+AGG + chr1_2:56263918-56263937 Msa0078610:intron 55.0%
CTGAAGCTCCCGCATATGCA+GGG + chr1_2:56263919-56263938 Msa0078610:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr1_2:56264015-56264034 None:intergenic 55.0%
CTGTTTGGGAGGGGTAACCT+TGG - chr1_2:56264070-56264089 None:intergenic 55.0%
GATCTAGGGGATCTGTGGTC+GGG + chr1_2:56264355-56264374 Msa0078610:intron 55.0%
GATCTGTGGTCGGGTTCAGA+AGG + chr1_2:56264364-56264383 Msa0078610:CDS 55.0%
TGTGGTCGGGTTCAGAAGGA+GGG + chr1_2:56264368-56264387 Msa0078610:CDS 55.0%
! GACAGAGGAGGAAAGGCACA+AGG + chr1_2:56264438-56264457 Msa0078610:CDS 55.0%
CTGGCTCCTCAAGTCAACGT+AGG - chr1_2:56264485-56264504 None:intergenic 55.0%
! AAGGCAAAGGTGTGGAGTGC+TGG + chr1_2:56264571-56264590 Msa0078610:CDS 55.0%
! AGGCAAAGGTGTGGAGTGCT+GGG + chr1_2:56264572-56264591 Msa0078610:CDS 55.0%
CTCCTAGCAGCCTCTCTTAG+TGG + chr1_2:56264627-56264646 Msa0078610:intron 55.0%
CATCTCGGACAAAAGGCCCT+TGG - chr1_2:56265482-56265501 None:intergenic 55.0%
TATTCCGATGCATGCTGCCC+TGG + chr1_2:56266147-56266166 Msa0078610:intron 55.0%
CATGTCATAGGGGGTGACCA+GGG - chr1_2:56266167-56266186 None:intergenic 55.0%
TCATGTCATAGGGGGTGACC+AGG - chr1_2:56266168-56266187 None:intergenic 55.0%
TGCAACTCGGCGAACAGCAT+CGG - chr1_2:56266526-56266545 None:intergenic 55.0%
TGTTCGCCGAGTTGCAGCAA+AGG + chr1_2:56266530-56266549 Msa0078610:CDS 55.0%
GTTCGCCGAGTTGCAGCAAA+GGG + chr1_2:56266531-56266550 Msa0078610:CDS 55.0%
AGGCTCCCTTTGCTGCAACT+CGG - chr1_2:56266539-56266558 None:intergenic 55.0%
GTTGCAGCAAAGGGAGCCTT+TGG + chr1_2:56266540-56266559 Msa0078610:CDS 55.0%
!! CAAGTGGCTTGCTGGTGCAA+TGG + chr1_2:56266628-56266647 Msa0078610:CDS 55.0%
CCCCTATCAGGTTACCCTTC+AGG - chr1_2:56266773-56266792 None:intergenic 55.0%
AGGGTAACCTGATAGGGGGT+TGG + chr1_2:56266775-56266794 Msa0078610:CDS 55.0%
GGGTAACCTGATAGGGGGTT+GGG + chr1_2:56266776-56266795 Msa0078610:CDS 55.0%
TAACCTGATAGGGGGTTGGG+TGG + chr1_2:56266779-56266798 Msa0078610:CDS 55.0%
GGATGGAACATCACCTCTCC+AGG + chr1_2:56266879-56266898 Msa0078610:CDS 55.0%
GCTATCAAGAGGTCCTGGAG+AGG - chr1_2:56266895-56266914 None:intergenic 55.0%
GGTTCTGTGGCCTCAGATGT+TGG + chr1_2:56267041-56267060 Msa0078610:CDS 55.0%
CAAGAGGTTGAAATGGGCGC+TGG + chr1_2:56267083-56267102 Msa0078610:CDS 55.0%
! GACTGGAGGGTAGTTCTGCT+GGG + chr1_2:56267441-56267460 Msa0078610:CDS 55.0%
ATCCAGGCAACTTGCAGGCT+TGG + chr1_2:56267526-56267545 Msa0078610:CDS 55.0%
! CAGGCTTGGTCATTGCTGTG+TGG + chr1_2:56267540-56267559 Msa0078610:CDS 55.0%
GCAGCAGTTCCATGTGGCTT+TGG + chr1_2:56267929-56267948 Msa0078610:CDS 55.0%
!! ACCAGGGAGCTGTTGCTTTG+AGG + chr1_2:56268601-56268620 Msa0078610:intron 55.0%
!! CCAGGGAGCTGTTGCTTTGA+GGG + chr1_2:56268602-56268621 Msa0078610:intron 55.0%
GAAGCTGGGAATGCCTTCCA+GGG + chr1_2:56269168-56269187 Msa0078610:CDS 55.0%
TGCTTCACGCATTCCCTGGA+AGG - chr1_2:56269184-56269203 None:intergenic 55.0%
!! ACCAAGCTGGTTTGGCAGGT+TGG + chr1_2:56269241-56269260 Msa0078610:intron 55.0%
CGAAGGGCAGACTACTGTAC+TGG + chr1_2:56270997-56271016 Msa0078610:CDS 55.0%
AGGGCAGACTACTGTACTGG+AGG + chr1_2:56271000-56271019 Msa0078610:CDS 55.0%
TGGATTGCCTAGGTGGCTTG+AGG + chr1_2:56271060-56271079 Msa0078610:CDS 55.0%
AGATGTGTGGCCACAGTAGC+CGG + chr1_2:56271740-56271759 Msa0078610:intron 55.0%
ACATAACACCCCGGCTACTG+TGG - chr1_2:56271753-56271772 None:intergenic 55.0%
TGACTCAACCAAACGGCTCC+AGG + chr1_2:56272204-56272223 Msa0078610:CDS 55.0%
TACACTTCCTTGGACGTGCC+TGG - chr1_2:56272225-56272244 None:intergenic 55.0%
CAACTGCCCTAACATGCCAC+TGG - chr1_2:56272661-56272680 None:intergenic 55.0%
CATGCAATCGAGACGGCGGT+TGG - chr1_2:56262924-56262943 None:intergenic 60.0%
GGAGCATGCAATCGAGACGG+CGG - chr1_2:56262928-56262947 None:intergenic 60.0%
TTCAGGGAGAGGGAGGTGGT+CGG - chr1_2:56262978-56262997 None:intergenic 60.0%
AGGACGGGAAGGATGTACGG+CGG - chr1_2:56263050-56263069 None:intergenic 60.0%
TCGAGAGAAGGAGGACGGGA+AGG - chr1_2:56263061-56263080 None:intergenic 60.0%
CTGCGACTGAACGTGGACTC+CGG + chr1_2:56263161-56263180 Msa0078610:CDS 60.0%
CTGAACGTGGACTCCGGTTC+TGG + chr1_2:56263167-56263186 Msa0078610:CDS 60.0%
CTGTATGCGTCGTGGTACGG+TGG + chr1_2:56263202-56263221 Msa0078610:CDS 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr1_2:56263914-56263933 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr1_2:56263930-56263949 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr1_2:56263931-56263950 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr1_2:56263930-56263949 Msa0078610:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr1_2:56263931-56263950 Msa0078610:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr1_2:56263946-56263965 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr1_2:56264061-56264080 None:intergenic 60.0%
CTGTGGTCGGGTTCAGAAGG+AGG + chr1_2:56264367-56264386 Msa0078610:CDS 60.0%
GTGGTCGGGTTCAGAAGGAG+GGG + chr1_2:56264369-56264388 Msa0078610:CDS 60.0%
GTGACCAGGGCAGCATGCAT+CGG - chr1_2:56266154-56266173 None:intergenic 60.0%
!! AGCATCGGCTGCCCCCATTA+TGG - chr1_2:56266511-56266530 None:intergenic 60.0%
!! GGCTTGCTGGTGCAATGGGA+TGG + chr1_2:56266633-56266652 Msa0078610:CDS 60.0%
GCTAACCACGGTGGCATACG+AGG + chr1_2:56266858-56266877 Msa0078610:CDS 60.0%
ACCACGGTGGCATACGAGGA+TGG + chr1_2:56266862-56266881 Msa0078610:CDS 60.0%
TCCATCCTCGTATGCCACCG+TGG - chr1_2:56266866-56266885 None:intergenic 60.0%
! GGACTGGAGGGTAGTTCTGC+TGG + chr1_2:56267440-56267459 Msa0078610:CDS 60.0%
! AGGGTAGTTCTGCTGGGCAG+TGG + chr1_2:56267447-56267466 Msa0078610:CDS 60.0%
! GTAGTTCTGCTGGGCAGTGG+TGG + chr1_2:56267450-56267469 Msa0078610:CDS 60.0%
GACCAAGCCTGCAAGTTGCC+TGG - chr1_2:56267531-56267550 None:intergenic 60.0%
CCCTCAAAGCAACAGCTCCC+TGG - chr1_2:56268605-56268624 None:intergenic 60.0%
CAGGTATCCCTTCTGCAGGC+TGG - chr1_2:56269005-56269024 None:intergenic 60.0%
GGAAGCTGGGAATGCCTTCC+AGG + chr1_2:56269167-56269186 Msa0078610:CDS 60.0%
!! CGACACCAAGCTGGTTTGGC+AGG + chr1_2:56269237-56269256 Msa0078610:CDS 60.0%
GCCAACCTGCCAAACCAGCT+TGG - chr1_2:56269245-56269264 None:intergenic 60.0%
TTGTGGGGTTGAGGTGGGGA+AGG + chr1_2:56269534-56269553 Msa0078610:intron 60.0%
TGTGGGGTTGAGGTGGGGAA+GGG + chr1_2:56269535-56269554 Msa0078610:intron 60.0%
AGATGCAGCGCACAGGCTTG+TGG - chr1_2:56270757-56270776 None:intergenic 60.0%
GATGTGTGGCCACAGTAGCC+GGG + chr1_2:56271741-56271760 Msa0078610:intron 60.0%
ATGTGTGGCCACAGTAGCCG+GGG + chr1_2:56271742-56271761 Msa0078610:intron 60.0%
GCAATCGAGACGGCGGTTGG+TGG - chr1_2:56262921-56262940 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr1_2:56263913-56263932 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr1_2:56263924-56263943 Msa0078610:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr1_2:56263925-56263944 Msa0078610:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr1_2:56263929-56263948 Msa0078610:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr1_2:56263944-56263963 Msa0078610:intron 65.0%
GAGCCACCCAACCCCCTATC+AGG - chr1_2:56266785-56266804 None:intergenic 65.0%
TTCTGCTGGGCAGTGGTGGC+TGG + chr1_2:56267454-56267473 Msa0078610:CDS 65.0%
GAGGCGGCAGCAGTTCCATG+TGG + chr1_2:56267923-56267942 Msa0078610:CDS 65.0%
TGGACGTGCCTGGAGCCGTT+TGG - chr1_2:56272215-56272234 None:intergenic 65.0%
AACGGCTCCAGGCACGTCCA+AGG + chr1_2:56272215-56272234 Msa0078610:CDS 65.0%
ATCGCCAAAGGCGGCGGTGC+CGG + chr1_2:56263001-56263020 Msa0078610:CDS 70.0%
GATTCCGGCACCGCCGCCTT+TGG - chr1_2:56263008-56263027 None:intergenic 70.0%
GGGAAGGATGTACGGCGGCG+CGG - chr1_2:56263045-56263064 None:intergenic 70.0%
TGTACGGCGGCGCGGAGAGG+AGG - chr1_2:56263037-56263056 None:intergenic 75.0%
GGATGTACGGCGGCGCGGAG+AGG - chr1_2:56263040-56263059 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 56262617 56273238 56262617 ID=Msa0078610;Name=Msa0078610
chr1_2 mRNA 56262617 56273238 56262617 ID=Msa0078610-mRNA-1;Parent=Msa0078610;Name=Msa0078610-mRNA-1;_AED=0.10;_eAED=0.10;_QI=153|0.84|0.85|0.92|0.84|0.78|14|483|1100
chr1_2 exon 56262617 56263460 56262617 ID=Msa0078610-mRNA-1:exon:17554;Parent=Msa0078610-mRNA-1
chr1_2 exon 56264362 56264614 56264362 ID=Msa0078610-mRNA-1:exon:17555;Parent=Msa0078610-mRNA-1
chr1_2 exon 56266344 56267136 56266344 ID=Msa0078610-mRNA-1:exon:17556;Parent=Msa0078610-mRNA-1
chr1_2 exon 56267437 56267561 56267437 ID=Msa0078610-mRNA-1:exon:17557;Parent=Msa0078610-mRNA-1
chr1_2 exon 56267886 56268009 56267886 ID=Msa0078610-mRNA-1:exon:17558;Parent=Msa0078610-mRNA-1
chr1_2 exon 56268098 56268115 56268098 ID=Msa0078610-mRNA-1:exon:17559;Parent=Msa0078610-mRNA-1
chr1_2 exon 56268606 56268771 56268606 ID=Msa0078610-mRNA-1:exon:17560;Parent=Msa0078610-mRNA-1
chr1_2 exon 56268873 56268913 56268873 ID=Msa0078610-mRNA-1:exon:17561;Parent=Msa0078610-mRNA-1
chr1_2 exon 56269006 56269258 56269006 ID=Msa0078610-mRNA-1:exon:17562;Parent=Msa0078610-mRNA-1
chr1_2 exon 56269786 56269909 56269786 ID=Msa0078610-mRNA-1:exon:17563;Parent=Msa0078610-mRNA-1
chr1_2 exon 56270721 56271081 56270721 ID=Msa0078610-mRNA-1:exon:17564;Parent=Msa0078610-mRNA-1
chr1_2 exon 56271969 56272335 56271969 ID=Msa0078610-mRNA-1:exon:17565;Parent=Msa0078610-mRNA-1
chr1_2 exon 56272488 56272849 56272488 ID=Msa0078610-mRNA-1:exon:17566;Parent=Msa0078610-mRNA-1
chr1_2 exon 56273131 56273238 56273131 ID=Msa0078610-mRNA-1:exon:17567;Parent=Msa0078610-mRNA-1
chr1_2 five_prime_UTR 56262617 56262769 56262617 ID=Msa0078610-mRNA-1:five_prime_utr;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56262770 56263460 56262770 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56264362 56264614 56264362 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56266344 56267136 56266344 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56267437 56267561 56267437 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56267886 56268009 56267886 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56268098 56268115 56268098 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56268606 56268771 56268606 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56268873 56268913 56268873 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56269006 56269258 56269006 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56269786 56269909 56269786 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56270721 56271081 56270721 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 CDS 56271969 56272322 56271969 ID=Msa0078610-mRNA-1:cds;Parent=Msa0078610-mRNA-1
chr1_2 three_prime_UTR 56272323 56272335 56272323 ID=Msa0078610-mRNA-1:three_prime_utr;Parent=Msa0078610-mRNA-1
chr1_2 three_prime_UTR 56272488 56272849 56272488 ID=Msa0078610-mRNA-1:three_prime_utr;Parent=Msa0078610-mRNA-1
chr1_2 three_prime_UTR 56273131 56273238 56273131 ID=Msa0078610-mRNA-1:three_prime_utr;Parent=Msa0078610-mRNA-1
Gene Sequence

>Msa0078610

ATGGATCCACTTCACCAAAACGACGCTTCTTCATCTTTTCCACTGTCGTCTACTCCTCAACAACAACAACGCACTTTCTTATATTCACGTTCCTCTTCTTCTTCTTCCAACGACAACGACGACGTTTCATCCTCCAATTCTATTCATTCCACCAACCGCCGTCTCGATTGCATGCTCCAATTCCTCGACCGTAAACTCAATATCTCCGACCACCTCCCTCTCCCTGAATTCATCGCCAAAGGCGGCGGTGCCGGAATCTTCAAACCTCCTCTCCGCGCCGCCGTACATCCTTCCCGTCCTCCTTCTCTCGAATTACGTCCCCATCCCTTACGCGAGACTCAGATTGGACGGTTTTTACGCACCATTGTTGCGACCGAGTCGCAATTATGGTCTGCGACTGAACGTGGACTCCGGTTCTGGAATTTTAAAGATCTGTATGCGTCGTGGTACGGTGGAGAAGTAGGTGGTGTGAGGAGTGGTGATGAAGAGAGTGCACCGTTTCGTGAATCGGTTTGGACTTCGCCGGCGATTTGTTTGGTTGCGGATGAAGGGAATAGGTTGGTGTGGAGTGGACATAGAGATGGGAAGATTCGCTGTTGGTATATGGATTCTCAGAATTCCGATTTTAATGAAAGATTATCTTGGCAAGCTCATCGTGGACCTGTTCTTTCAATCACAATCACTTCTTATGGGGATCTGTGGTCGGGTTCAGAAGGAGGGGTTATAAAAATATGGCCTTGGGAGGCTGTTGAAAAATCTATTCATCTGACAGAGGAGGAAAGGCACAAGGCTGTCATATTCATCGAGAGATCCTACGTTGACTTGAGGAGCCAGCTATCTACAAATGGCTACAATAACATGCTAACTTCAGATATAAAGTACTTAGTATCGGATAATTCAAAGGCAAAGGTGTGGAGTGCTGGGTATTTTTCATATGCTTTATGGGATGCTCGTACAAGAGAGTTGTTGAAAGTTTTCAATTCAGATGGCCAAATGGAGAATCGATCAGACTTGCCTTCAATGCAAGACTTTCCGGCCGACCTTGTTTCAAGTTCTAGGAAAGACAGAAACCAAAGTTCCATTGGGTTCTTTCAGCGCTCACGTAATGCCATAATGGGGGCAGCCGATGCTGTTCGCCGAGTTGCAGCAAAGGGAGCCTTTGGAGATGAGAATCGGAGAACTGAAGCACTTGTAGTAACAATTGATGGAATGATTTGGACAGGATATTCAAGTGGCTTGCTGGTGCAATGGGATGGAAATGGCAATCGCATACAGGATTTTATTTACCACCCATTTGCTGTTCAATGTTTTTGTACTTATGGAATGCAAATTTGGGTAGGTTATGTGTCTGGCATTGTCCAGGTATTGGACCTGAAGGGTAACCTGATAGGGGGTTGGGTGGCTCATAGCTGTCCACTTGTAAAAATGACAGTTGGAGTTGGCTATGTATTCACATTGGCTAACCACGGTGGCATACGAGGATGGAACATCACCTCTCCAGGACCTCTTGATAGCATTTTGTGTTCAGAATTGGGCGGCAAAGAATTTTTATATACTAAAATAGAAAACATAAAGATCTTGAGTGGCACTTGGAATGTTGGACAAGGAAAAGCATCTCAAGATTCCCTTACTTCATGGCTAGGTTCTGTGGCCTCAGATGTTGGCCTTGTTGTTGTTGGGTTGCAAGAGGTTGAAATGGGCGCTGGATTTCTTGCAATGTCTGCAGCTAAAGAAACTGTAGGACTGGAGGGTAGTTCTGCTGGGCAGTGGTGGCTGGATATGATAGACAAAACACTGGATGAAGGTTCAACATTTAAACGAATTGGATCCAGGCAACTTGCAGGCTTGGTCATTGCTGTGTGGGTTAAAACAAACATTAGACTTCATGTTGGGGATGTTGAGGCGGCAGCAGTTCCATGTGGCTTTGGACGTGCTATTGGAAATAAGGTAGGGTATGTTTTCTCTGCTGCTATGCTTTGCAAGCTGGATTATGAGAATTCTAAGGGAGCTGTTGCTTTGAGGGTTAGAGTGTATGATCGGATTATGTGCTTTGTTAATTGTCACTTTGCTGCACATTTAGATGCAGTTGGTCGTCGCAATTCAGATTTTGATTATGTATACCGAACAATGTCCTTTAGTCGACCAACAAACCTCTTAAATACAACACCTGCTGGAACTTCAGCTTCTATTCCAATGTTTCGTGGTACAAATCCTGCAGAAGGGATACCTGAGTTATCTGAGGCAGACATGATTGTATTTCTTGGTGATTTGAACTATCGTCTTGATGACATTTCGTATGATGAAGCAAGAGATTTTGTATCTCAAAGATGCTTTGATTGGCTTAGAGAAAGGGATCAGCTTCGAGCTGAAATGGAAGCTGGGAATGCCTTCCAGGGAATGCGTGAAGCAGTAATAACATTTCCTCCCACATACAAGTTTGAACGACACCAAGCTGGTTTGGCAGGGTATGACTCTGGTGAAAAGAAACGCATCCCTGCCTGGTGTGACAGAATTTTGTATCGTGATAGTCGCTCTTCTTTGGTTGCTGAATGCAATTTGGAGTACCCTGTTGTCTCTTCAGTATTGCAGTACGAAGCCTGCATGGATGTCACAGATAGTGACCACAAGCCTGTGCGCTGCATCTTTTCTACAGATATTGCTCGAGTAGATGAACCAATACGGAGACAGGAGTTTGGAGAAATTCTCGAGTCAAATGAGAAAATAAAATGTCTTCTGAAAGAATTGTACAAGATTCCTGAAACTATCATAAGTACAAACAACATAATTCTTCAAAACCAGGACACATTAATTTTGCGTATTACTAATAAAAGTACAGAAGACAATGCTTTGTTCGAAATAATTTGCGAAGGGCAGACTACTGTACTGGAGGATCAGAAGGCAACAAACCATCAGTTGAGAGGTTCTTTTGGATTGCCTAGGTGGCTTGAGGTAAGTCCTGCAACTGGTATTATAAGACCAGATCAGATTATTGAGGTATCAGTGCATCATGAGGAATTTCAGACTCAGGAAGAGTTTGTTGATGGTGTTGTACAAAACTCTTGGTGTGAAGACTCCAGAGACAAGGAAGCAATTTTGATTGTTAAGGTGCATGGGAATTACGCTATTCAGACAAGAAATCACCGAGTGCGTGTTCACCACTGTTATTCATCCAAGAAAAACCAATTGACTCAACCAAACGGCTCCAGGCACGTCCAAGGAAGTGTACTTCACCGATCTGATTTCCAACGTTTGAGCAATTCATTTGATGTGGTTGACCAGCTGCATAAATTGCATAGCCCTTGA
Protein sequence

>Msa0078610

MDPLHQNDASSSFPLSSTPQQQQRTFLYSRSSSSSSNDNDDVSSSNSIHSTNRRLDCMLQFLDRKLNISDHLPLPEFIAKGGGAGIFKPPLRAAVHPSRPPSLELRPHPLRETQIGRFLRTIVATESQLWSATERGLRFWNFKDLYASWYGGEVGGVRSGDEESAPFRESVWTSPAICLVADEGNRLVWSGHRDGKIRCWYMDSQNSDFNERLSWQAHRGPVLSITITSYGDLWSGSEGGVIKIWPWEAVEKSIHLTEEERHKAVIFIERSYVDLRSQLSTNGYNNMLTSDIKYLVSDNSKAKVWSAGYFSYALWDARTRELLKVFNSDGQMENRSDLPSMQDFPADLVSSSRKDRNQSSIGFFQRSRNAIMGAADAVRRVAAKGAFGDENRRTEALVVTIDGMIWTGYSSGLLVQWDGNGNRIQDFIYHPFAVQCFCTYGMQIWVGYVSGIVQVLDLKGNLIGGWVAHSCPLVKMTVGVGYVFTLANHGGIRGWNITSPGPLDSILCSELGGKEFLYTKIENIKILSGTWNVGQGKASQDSLTSWLGSVASDVGLVVVGLQEVEMGAGFLAMSAAKETVGLEGSSAGQWWLDMIDKTLDEGSTFKRIGSRQLAGLVIAVWVKTNIRLHVGDVEAAAVPCGFGRAIGNKVGYVFSAAMLCKLDYENSKGAVALRVRVYDRIMCFVNCHFAAHLDAVGRRNSDFDYVYRTMSFSRPTNLLNTTPAGTSASIPMFRGTNPAEGIPELSEADMIVFLGDLNYRLDDISYDEARDFVSQRCFDWLRERDQLRAEMEAGNAFQGMREAVITFPPTYKFERHQAGLAGYDSGEKKRIPAWCDRILYRDSRSSLVAECNLEYPVVSSVLQYEACMDVTDSDHKPVRCIFSTDIARVDEPIRRQEFGEILESNEKIKCLLKELYKIPETIISTNNIILQNQDTLILRITNKSTEDNALFEIICEGQTTVLEDQKATNHQLRGSFGLPRWLEVSPATGIIRPDQIIEVSVHHEEFQTQEEFVDGVVQNSWCEDSRDKEAILIVKVHGNYAIQTRNHRVRVHHCYSSKKNQLTQPNGSRHVQGSVLHRSDFQRLSNSFDVVDQLHKLHSP*