Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082440 | XP_013468608.1 | 97.753 | 89 | 2 | 0 | 1 | 89 | 1 | 89 | 6.28e-52 | 185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082440 | A0A072VX24 | 97.753 | 89 | 2 | 0 | 1 | 89 | 1 | 89 | 3.00e-52 | 185 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0082440 | 0.808000 | 3.839029e-50 | -8.615850e-47 |
| Msa0006110 | Msa0082440 | 0.809774 | 1.602017e-50 | -8.615850e-47 |
| Msa0017320 | Msa0082440 | 0.809400 | 1.928143e-50 | -8.615850e-47 |
| Msa0021210 | Msa0082440 | 0.818506 | 1.892202e-52 | -8.615850e-47 |
| Msa0023330 | Msa0082440 | 0.815747 | 7.891108e-52 | -8.615850e-47 |
| Msa0026910 | Msa0082440 | 0.851526 | 8.379927e-61 | -8.615850e-47 |
| Msa0031180 | Msa0082440 | 0.843990 | 9.971279e-59 | -8.615850e-47 |
| Msa0031310 | Msa0082440 | 0.812772 | 3.582878e-51 | -8.615850e-47 |
| Msa0034350 | Msa0082440 | 0.823487 | 1.348953e-53 | -8.615850e-47 |
| Msa0035120 | Msa0082440 | 0.813372 | 2.646570e-51 | -8.615850e-47 |
| Msa0035150 | Msa0082440 | 0.824611 | 7.349326e-54 | -8.615850e-47 |
| Msa0037120 | Msa0082440 | 0.831458 | 1.650625e-55 | -8.615850e-47 |
| Msa0040620 | Msa0082440 | 0.809586 | 1.758627e-50 | -8.615850e-47 |
| Msa0045340 | Msa0082440 | 0.801524 | 8.646720e-49 | -8.615850e-47 |
| Msa0054820 | Msa0082440 | 0.835438 | 1.678420e-56 | -8.615850e-47 |
| Msa0056450 | Msa0082440 | 0.863400 | 2.557963e-64 | -8.615850e-47 |
| Msa0058600 | Msa0082440 | 0.831532 | 1.582390e-55 | -8.615850e-47 |
| Msa0061340 | Msa0082440 | 0.824606 | 7.368294e-54 | -8.615850e-47 |
| Msa0064110 | Msa0082440 | 0.840565 | 8.054531e-58 | -8.615850e-47 |
| Msa0064920 | Msa0082440 | 0.844940 | 5.536355e-59 | -8.615850e-47 |
| Msa0065680 | Msa0082440 | -0.836963 | 6.877012e-57 | -8.615850e-47 |
| Msa0068430 | Msa0082440 | 0.803951 | 2.727797e-49 | -8.615850e-47 |
| Msa0074750 | Msa0082440 | 0.838981 | 2.081869e-57 | -8.615850e-47 |
| Msa0078060 | Msa0082440 | 0.812513 | 4.082838e-51 | -8.615850e-47 |
| Msa0078480 | Msa0082440 | 0.842566 | 2.390643e-58 | -8.615850e-47 |
| Msa0078610 | Msa0082440 | 0.807306 | 5.391709e-50 | -8.615850e-47 |
| Msa0078640 | Msa0082440 | 0.807088 | 5.995223e-50 | -8.615850e-47 |
| Msa0079400 | Msa0082440 | 0.801441 | 8.989605e-49 | -8.615850e-47 |
| Msa0081650 | Msa0082440 | 0.814481 | 1.507334e-51 | -8.615850e-47 |
| Msa0082440 | Msa0083090 | 0.803804 | 2.927425e-49 | -8.615850e-47 |
| Msa0082440 | Msa0084340 | 0.829257 | 5.694548e-55 | -8.615850e-47 |
| Msa0082440 | Msa0085370 | 0.818426 | 1.972456e-52 | -8.615850e-47 |
| Msa0082440 | Msa0089980 | 0.826801 | 2.221781e-54 | -8.615850e-47 |
| Msa0082440 | Msa0090010 | 0.821991 | 3.007507e-53 | -8.615850e-47 |
| Msa0082440 | Msa0091780 | 0.826071 | 3.317135e-54 | -8.615850e-47 |
| Msa0082440 | Msa0092440 | 0.834576 | 2.767057e-56 | -8.615850e-47 |
| Msa0082440 | Msa0096580 | 0.808437 | 3.098926e-50 | -8.615850e-47 |
| Msa0082440 | Msa0100160 | 0.814830 | 1.261502e-51 | -8.615850e-47 |
| Msa0082440 | Msa0102270 | 0.807868 | 4.095383e-50 | -8.615850e-47 |
| Msa0082440 | Msa0105070 | 0.806824 | 6.818149e-50 | -8.615850e-47 |
| Msa0082440 | Msa0106620 | 0.819340 | 1.222661e-52 | -8.615850e-47 |
| Msa0082440 | Msa0106710 | 0.812417 | 4.285514e-51 | -8.615850e-47 |
| Msa0082440 | Msa0114430 | 0.809373 | 1.954242e-50 | -8.615850e-47 |
| Msa0082440 | Msa0126230 | 0.846658 | 1.891793e-59 | -8.615850e-47 |
| Msa0082440 | Msa0131290 | 0.819393 | 1.189351e-52 | -8.615850e-47 |
| Msa0082440 | Msa0133820 | 0.803516 | 3.358809e-49 | -8.615850e-47 |
| Msa0082440 | Msa0138210 | 0.829876 | 4.027169e-55 | -8.615850e-47 |
| Msa0082440 | Msa0138500 | 0.807112 | 5.925651e-50 | -8.615850e-47 |
| Msa0082440 | Msa0138520 | 0.816943 | 4.259949e-52 | -8.615850e-47 |
| Msa0082440 | Msa0139700 | 0.807887 | 4.058004e-50 | -8.615850e-47 |
| Msa0082440 | Msa0143850 | 0.830916 | 2.242751e-55 | -8.615850e-47 |
| Msa0082440 | Msa0144360 | 0.808789 | 2.606644e-50 | -8.615850e-47 |
| Msa0082440 | Msa0144790 | 0.818132 | 2.299120e-52 | -8.615850e-47 |
| Msa0082440 | Msa0149820 | 0.800787 | 1.223165e-48 | -8.615850e-47 |
| Msa0082440 | Msa0152400 | 0.825370 | 4.864367e-54 | -8.615850e-47 |
| Msa0082440 | Msa0154840 | -0.828184 | 1.035124e-54 | -8.615850e-47 |
| Msa0082440 | Msa0159770 | 0.801947 | 7.078792e-49 | -8.615850e-47 |
| Msa0082440 | Msa0167850 | 0.805248 | 1.463150e-49 | -8.615850e-47 |
| Msa0082440 | Msa0171250 | 0.803063 | 4.168642e-49 | -8.615850e-47 |
| Msa0082440 | Msa0177170 | 0.822143 | 2.773930e-53 | -8.615850e-47 |
| Msa0082440 | Msa0183420 | 0.825864 | 3.714214e-54 | -8.615850e-47 |
| Msa0082440 | Msa0183760 | 0.802097 | 6.592997e-49 | -8.615850e-47 |
| Msa0082440 | Msa0200560 | 0.810568 | 1.080553e-50 | -8.615850e-47 |
| Msa0082440 | Msa0205340 | 0.800957 | 1.129182e-48 | -8.615850e-47 |
| Msa0082440 | Msa0207420 | 0.815680 | 8.166038e-52 | -8.615850e-47 |
| Msa0082440 | Msa0212990 | 0.801065 | 1.073307e-48 | -8.615850e-47 |
| Msa0082440 | Msa0218350 | 0.838817 | 2.296022e-57 | -8.615850e-47 |
| Msa0082440 | Msa0220730 | 0.853552 | 2.216204e-61 | -8.615850e-47 |
| Msa0082440 | Msa0225220 | 0.807424 | 5.089613e-50 | -8.615850e-47 |
| Msa0082440 | Msa0225670 | 0.801449 | 8.956997e-49 | -8.615850e-47 |
| Msa0082440 | Msa0226180 | 0.804433 | 2.165744e-49 | -8.615850e-47 |
| Msa0082440 | Msa0227190 | 0.809442 | 1.888436e-50 | -8.615850e-47 |
| Msa0082440 | Msa0232340 | 0.818073 | 2.370915e-52 | -8.615850e-47 |
| Msa0082440 | Msa0236770 | 0.818595 | 1.805466e-52 | -8.615850e-47 |
| Msa0082440 | Msa0237200 | 0.805018 | 1.634486e-49 | -8.615850e-47 |
| Msa0082440 | Msa0241140 | 0.802440 | 5.604311e-49 | -8.615850e-47 |
| Msa0082440 | Msa0248520 | 0.808462 | 3.060078e-50 | -8.615850e-47 |
| Msa0082440 | Msa0249100 | 0.835788 | 1.368311e-56 | -8.615850e-47 |
| Msa0082440 | Msa0251270 | 0.832395 | 9.687795e-56 | -8.615850e-47 |
| Msa0082440 | Msa0265150 | 0.815073 | 1.114460e-51 | -8.615850e-47 |
| Msa0082440 | Msa0269520 | 0.828726 | 7.659663e-55 | -8.615850e-47 |
| Msa0082440 | Msa0271790 | 0.832771 | 7.815113e-56 | -8.615850e-47 |
| Msa0082440 | Msa0274970 | 0.800244 | 1.578724e-48 | -8.615850e-47 |
| Msa0082440 | Msa0275010 | 0.807749 | 4.342004e-50 | -8.615850e-47 |
| Msa0082440 | Msa0279390 | 0.802305 | 5.974304e-49 | -8.615850e-47 |
| Msa0082440 | Msa0280150 | 0.805768 | 1.138254e-49 | -8.615850e-47 |
| Msa0082440 | Msa0284350 | 0.821564 | 3.776175e-53 | -8.615850e-47 |
| Msa0082440 | Msa0304100 | 0.822327 | 2.513060e-53 | -8.615850e-47 |
| Msa0082440 | Msa0305330 | 0.848898 | 4.568575e-60 | -8.615850e-47 |
| Msa0082440 | Msa0307310 | 0.817954 | 2.522902e-52 | -8.615850e-47 |
| Msa0082440 | Msa0308460 | 0.821384 | 4.155418e-53 | -8.615850e-47 |
| Msa0082440 | Msa0310430 | 0.822847 | 1.902391e-53 | -8.615850e-47 |
| Msa0082440 | Msa0312530 | 0.803180 | 3.942535e-49 | -8.615850e-47 |
| Msa0082440 | Msa0315680 | 0.800826 | 1.200904e-48 | -8.615850e-47 |
| Msa0082440 | Msa0317740 | 0.810795 | 9.649741e-51 | -8.615850e-47 |
| Msa0082440 | Msa0318880 | 0.831474 | 1.635083e-55 | -8.615850e-47 |
| Msa0082440 | Msa0320800 | 0.809135 | 2.197337e-50 | -8.615850e-47 |
| Msa0082440 | Msa0330340 | 0.810042 | 1.403448e-50 | -8.615850e-47 |
| Msa0082440 | Msa0340690 | 0.814311 | 1.643142e-51 | -8.615850e-47 |
| Msa0082440 | Msa0340710 | 0.808762 | 2.641496e-50 | -8.615850e-47 |
| Msa0082440 | Msa0342010 | 0.815455 | 9.163020e-52 | -8.615850e-47 |
| Msa0082440 | Msa0347950 | 0.833375 | 5.530998e-56 | -8.615850e-47 |
| Msa0082440 | Msa0347990 | 0.828555 | 8.423205e-55 | -8.615850e-47 |
| Msa0082440 | Msa0348530 | 0.828880 | 7.029372e-55 | -8.615850e-47 |
| Msa0082440 | Msa0358400 | 0.856087 | 4.076221e-62 | -8.615850e-47 |
| Msa0082440 | Msa0362890 | 0.826308 | 2.912456e-54 | -8.615850e-47 |
| Msa0082440 | Msa0363400 | 0.804235 | 2.381177e-49 | -8.615850e-47 |
| Msa0082440 | Msa0376020 | 0.800486 | 1.408960e-48 | -8.615850e-47 |
| Msa0082440 | Msa0377440 | 0.825149 | 5.485908e-54 | -8.615850e-47 |
| Msa0082440 | Msa0379610 | 0.835285 | 1.834414e-56 | -8.615850e-47 |
| Msa0082440 | Msa0382370 | 0.800752 | 1.243676e-48 | -8.615850e-47 |
| Msa0082440 | Msa0387050 | 0.818336 | 2.067327e-52 | -8.615850e-47 |
| Msa0082440 | Msa0387250 | 0.807868 | 4.095667e-50 | -8.615850e-47 |
| Msa0082440 | Msa0388220 | 0.803879 | 2.823912e-49 | -8.615850e-47 |
| Msa0082440 | Msa0390960 | 0.808073 | 3.703780e-50 | -8.615850e-47 |
| Msa0082440 | Msa0394140 | 0.803754 | 2.997987e-49 | -8.615850e-47 |
| Msa0082440 | Msa0394690 | 0.811915 | 5.514410e-51 | -8.615850e-47 |
| Msa0082440 | Msa0395980 | 0.845812 | 3.215475e-59 | -8.615850e-47 |
| Msa0082440 | Msa0398200 | 0.827784 | 1.292381e-54 | -8.615850e-47 |
| Msa0082440 | Msa0410300 | 0.811908 | 5.533153e-51 | -8.615850e-47 |
| Msa0082440 | Msa0410840 | 0.836810 | 7.523070e-57 | -8.615850e-47 |
| Msa0082440 | Msa0410870 | 0.810895 | 9.180026e-51 | -8.615850e-47 |
| Msa0082440 | Msa0417650 | 0.824149 | 9.439310e-54 | -8.615850e-47 |
| Msa0082440 | Msa0417730 | 0.805510 | 1.289440e-49 | -8.615850e-47 |
| Msa0082440 | Msa0422010 | 0.803788 | 2.949070e-49 | -8.615850e-47 |
| Msa0082440 | Msa0423840 | 0.841167 | 5.599022e-58 | -8.615850e-47 |
| Msa0082440 | Msa0430870 | 0.819400 | 1.184552e-52 | -8.615850e-47 |
| Msa0082440 | Msa0430950 | 0.812889 | 3.378555e-51 | -8.615850e-47 |
| Msa0082440 | Msa0432160 | 0.815487 | 9.013566e-52 | -8.615850e-47 |
| Msa0082440 | Msa0432170 | 0.804914 | 1.718394e-49 | -8.615850e-47 |
| Msa0082440 | Msa0433410 | -0.801236 | 9.903754e-49 | -8.615850e-47 |
| Msa0082440 | Msa0440510 | 0.817801 | 2.731493e-52 | -8.615850e-47 |
| Msa0082440 | Msa0443870 | 0.813955 | 1.969012e-51 | -8.615850e-47 |
| Msa0082440 | Msa0455740 | 0.819661 | 1.032845e-52 | -8.615850e-47 |
| Msa0082440 | Msa0468250 | 0.838398 | 2.944831e-57 | -8.615850e-47 |
| Msa0082440 | Msa0473980 | 0.810336 | 1.212881e-50 | -8.615850e-47 |
| Msa0082440 | Msa0476680 | 0.822696 | 2.063320e-53 | -8.615850e-47 |
| Msa0082440 | Msa0483740 | 0.855124 | 7.785090e-62 | -8.615850e-47 |
| Msa0082440 | Msa0491000 | 0.823541 | 1.310625e-53 | -8.615850e-47 |
| Msa0082440 | Msa0510290 | 0.840254 | 9.711210e-58 | -8.615850e-47 |
| Msa0082440 | Msa0512870 | 0.813410 | 2.595540e-51 | -8.615850e-47 |
| Msa0082440 | Msa0515710 | 0.807041 | 6.133879e-50 | -8.615850e-47 |
| Msa0082440 | Msa0517090 | 0.830866 | 2.306820e-55 | -8.615850e-47 |
| Msa0082440 | Msa0517650 | 0.822571 | 2.205627e-53 | -8.615850e-47 |
| Msa0082440 | Msa0518960 | 0.854584 | 1.116454e-61 | -8.615850e-47 |
| Msa0082440 | Msa0521010 | 0.820678 | 6.042426e-53 | -8.615850e-47 |
| Msa0082440 | Msa0531250 | 0.801242 | 9.873843e-49 | -8.615850e-47 |
| Msa0082440 | Msa0548150 | 0.806554 | 7.774710e-50 | -8.615850e-47 |
| Msa0082440 | Msa0555320 | 0.807550 | 4.786201e-50 | -8.615850e-47 |
| Msa0082440 | Msa0559500 | 0.820052 | 8.407663e-53 | -8.615850e-47 |
| Msa0082440 | Msa0560500 | 0.806080 | 9.787025e-50 | -8.615850e-47 |
| Msa0082440 | Msa0566750 | 0.802759 | 4.817906e-49 | -8.615850e-47 |
| Msa0082440 | Msa0574390 | 0.809109 | 2.225343e-50 | -8.615850e-47 |
| Msa0082440 | Msa0576680 | 0.835744 | 1.403665e-56 | -8.615850e-47 |
| Msa0082440 | Msa0588090 | 0.806962 | 6.376396e-50 | -8.615850e-47 |
| Msa0082440 | Msa0592180 | 0.817041 | 4.049710e-52 | -8.615850e-47 |
| Msa0082440 | Msa0594200 | 0.811628 | 6.364438e-51 | -8.615850e-47 |
| Msa0082440 | Msa0595600 | 0.808966 | 2.388072e-50 | -8.615850e-47 |
| Msa0082440 | Msa0601950 | 0.805365 | 1.382717e-49 | -8.615850e-47 |
| Msa0082440 | Msa0607320 | 0.822015 | 2.968626e-53 | -8.615850e-47 |
| Msa0082440 | Msa0610670 | 0.803296 | 3.729451e-49 | -8.615850e-47 |
| Msa0082440 | Msa0613710 | 0.805630 | 1.216415e-49 | -8.615850e-47 |
| Msa0082440 | Msa0615030 | 0.806424 | 8.282782e-50 | -8.615850e-47 |
| Msa0082440 | Msa0615220 | 0.828415 | 9.103949e-55 | -8.615850e-47 |
| Msa0082440 | Msa0618970 | 0.801843 | 7.435659e-49 | -8.615850e-47 |
| Msa0082440 | Msa0621600 | 0.802660 | 5.049620e-49 | -8.615850e-47 |
| Msa0082440 | Msa0621650 | 0.807759 | 4.320642e-50 | -8.615850e-47 |
| Msa0082440 | Msa0624680 | 0.810475 | 1.131390e-50 | -8.615850e-47 |
| Msa0082440 | Msa0626220 | 0.814157 | 1.777782e-51 | -8.615850e-47 |
| Msa0082440 | Msa0628420 | 0.805257 | 1.456823e-49 | -8.615850e-47 |
| Msa0082440 | Msa0629430 | 0.812523 | 4.061787e-51 | -8.615850e-47 |
| Msa0082440 | Msa0636020 | 0.800443 | 1.438109e-48 | -8.615850e-47 |
| Msa0082440 | Msa0638360 | 0.800769 | 1.233960e-48 | -8.615850e-47 |
| Msa0082440 | Msa0640940 | 0.808099 | 3.657449e-50 | -8.615850e-47 |
| Msa0082440 | Msa0641730 | 0.834657 | 2.640434e-56 | -8.615850e-47 |
| Msa0082440 | Msa0651270 | 0.806457 | 8.150682e-50 | -8.615850e-47 |
| Msa0082440 | Msa0652690 | 0.802233 | 6.181397e-49 | -8.615850e-47 |
| Msa0082440 | Msa0657750 | 0.819467 | 1.143756e-52 | -8.615850e-47 |
| Msa0082440 | Msa0659210 | 0.815571 | 8.636253e-52 | -8.615850e-47 |
| Msa0082440 | Msa0661320 | 0.861781 | 8.059547e-64 | -8.615850e-47 |
| Msa0082440 | Msa0663250 | 0.830831 | 2.352664e-55 | -8.615850e-47 |
| Msa0082440 | Msa0664540 | 0.800742 | 1.249692e-48 | -8.615850e-47 |
| Msa0082440 | Msa0685750 | 0.818051 | 2.397684e-52 | -8.615850e-47 |
| Msa0082440 | Msa0687450 | 0.813263 | 2.797102e-51 | -8.615850e-47 |
| Msa0082440 | Msa0687840 | 0.802152 | 6.424046e-49 | -8.615850e-47 |
| Msa0082440 | Msa0689420 | 0.821885 | 3.182985e-53 | -8.615850e-47 |
| Msa0082440 | Msa0689760 | 0.856217 | 3.734857e-62 | -8.615850e-47 |
| Msa0082440 | Msa0703660 | 0.805984 | 1.025279e-49 | -8.615850e-47 |
| Msa0082440 | Msa0704920 | 0.808379 | 3.188123e-50 | -8.615850e-47 |
| Msa0082440 | Msa0705190 | 0.825526 | 4.467149e-54 | -8.615850e-47 |
| Msa0082440 | Msa0705390 | 0.802142 | 6.454183e-49 | -8.615850e-47 |
| Msa0082440 | Msa0711130 | 0.814729 | 1.328502e-51 | -8.615850e-47 |
| Msa0082440 | Msa0716860 | 0.854851 | 9.344577e-62 | -8.615850e-47 |
| Msa0082440 | Msa0722070 | 0.802110 | 6.553038e-49 | -8.615850e-47 |
| Msa0082440 | Msa0741070 | 0.823416 | 1.401518e-53 | -8.615850e-47 |
| Msa0082440 | Msa0748730 | 0.815531 | 8.814166e-52 | -8.615850e-47 |
| Msa0082440 | Msa0749400 | 0.815658 | 8.258050e-52 | -8.615850e-47 |
| Msa0082440 | Msa0756380 | 0.834105 | 3.632799e-56 | -8.615850e-47 |
| Msa0082440 | Msa0756530 | 0.803349 | 3.636828e-49 | -8.615850e-47 |
| Msa0082440 | Msa0757800 | 0.854908 | 8.998502e-62 | -8.615850e-47 |
| Msa0082440 | Msa0760130 | 0.807902 | 4.027697e-50 | -8.615850e-47 |
| Msa0082440 | Msa0763400 | 0.810979 | 8.805910e-51 | -8.615850e-47 |
| Msa0082440 | Msa0763890 | 0.829320 | 5.497829e-55 | -8.615850e-47 |
| Msa0082440 | Msa0763920 | 0.833161 | 6.250250e-56 | -8.615850e-47 |
| Msa0082440 | Msa0767100 | 0.805601 | 1.234071e-49 | -8.615850e-47 |
| Msa0082440 | Msa0780280 | 0.836305 | 1.011328e-56 | -8.615850e-47 |
| Msa0082440 | Msa0789560 | 0.823278 | 1.509989e-53 | -8.615850e-47 |
| Msa0082440 | Msa0796300 | 0.820788 | 5.699469e-53 | -8.615850e-47 |
| Msa0082440 | Msa0800310 | 0.811718 | 6.084935e-51 | -8.615850e-47 |
| Msa0082440 | Msa0800700 | 0.833038 | 6.707613e-56 | -8.615850e-47 |
| Msa0082440 | Msa0817460 | 0.802346 | 5.861707e-49 | -8.615850e-47 |
| Msa0082440 | Msa0821800 | 0.825506 | 4.516545e-54 | -8.615850e-47 |
| Msa0082440 | Msa0828660 | 0.814243 | 1.701008e-51 | -8.615850e-47 |
| Msa0082440 | Msa0828920 | 0.826651 | 2.413010e-54 | -8.615850e-47 |
| Msa0082440 | Msa0832090 | 0.862857 | 3.766236e-64 | -8.615850e-47 |
| Msa0082440 | Msa0834750 | 0.804956 | 1.683708e-49 | -8.615850e-47 |
| Msa0082440 | Msa0844110 | 0.830224 | 3.312369e-55 | -8.615850e-47 |
| Msa0082440 | Msa0861830 | 0.823380 | 1.428894e-53 | -8.615850e-47 |
| Msa0082440 | Msa0866410 | 0.802542 | 5.339433e-49 | -8.615850e-47 |
| Msa0082440 | Msa0868160 | 0.859125 | 5.134937e-63 | -8.615850e-47 |
| Msa0082440 | Msa0868440 | 0.801973 | 6.993314e-49 | -8.615850e-47 |
| Msa0082440 | Msa0873860 | 0.821003 | 5.087517e-53 | -8.615850e-47 |
| Msa0082440 | Msa0892570 | 0.828125 | 1.069515e-54 | -8.615850e-47 |
| Msa0082440 | Msa0900620 | 0.812209 | 4.757837e-51 | -8.615850e-47 |
| Msa0082440 | Msa0925280 | 0.804144 | 2.487601e-49 | -8.615850e-47 |
| Msa0082440 | Msa0926670 | 0.809818 | 1.567686e-50 | -8.615850e-47 |
| Msa0082440 | Msa0933450 | 0.814385 | 1.582940e-51 | -8.615850e-47 |
| Msa0082440 | Msa0936390 | 0.818698 | 1.711142e-52 | -8.615850e-47 |
| Msa0082440 | Msa0945240 | 0.802138 | 6.467160e-49 | -8.615850e-47 |
| Msa0082440 | Msa0958030 | 0.803338 | 3.657102e-49 | -8.615850e-47 |
| Msa0082440 | Msa0975940 | 0.801464 | 8.892131e-49 | -8.615850e-47 |
| Msa0082440 | Msa0981310 | 0.810750 | 9.868156e-51 | -8.615850e-47 |
| Msa0082440 | Msa0983770 | 0.818551 | 1.848331e-52 | -8.615850e-47 |
| Msa0082440 | Msa0986510 | 0.821933 | 3.102806e-53 | -8.615850e-47 |
| Msa0082440 | Msa0996020 | 0.814709 | 1.341615e-51 | -8.615850e-47 |
| Msa0082440 | Msa0998590 | 0.809602 | 1.744389e-50 | -8.615850e-47 |
| Msa0082440 | Msa1000880 | 0.808589 | 2.875132e-50 | -8.615850e-47 |
| Msa0082440 | Msa1006010 | -0.807227 | 5.601710e-50 | -8.615850e-47 |
| Msa0082440 | Msa1010070 | 0.828939 | 6.803899e-55 | -8.615850e-47 |
| Msa0082440 | Msa1012590 | -0.802979 | 4.337572e-49 | -8.615850e-47 |
| Msa0082440 | Msa1020940 | 0.809030 | 2.314471e-50 | -8.615850e-47 |
| Msa0082440 | Msa1034200 | 0.804911 | 1.720519e-49 | -8.615850e-47 |
| Msa0082440 | Msa1034280 | 0.800185 | 1.622743e-48 | -8.615850e-47 |
| Msa0082440 | Msa1034500 | 0.815725 | 7.979990e-52 | -8.615850e-47 |
| Msa0082440 | Msa1036410 | 0.801621 | 8.258446e-49 | -8.615850e-47 |
| Msa0082440 | Msa1038080 | 0.815150 | 1.071423e-51 | -8.615850e-47 |
| Msa0082440 | Msa1050740 | 0.804316 | 2.290290e-49 | -8.615850e-47 |
| Msa0082440 | Msa1065430 | 0.807493 | 4.920150e-50 | -8.615850e-47 |
| Msa0082440 | Msa1077070 | 0.838158 | 3.395632e-57 | -8.615850e-47 |
| Msa0082440 | Msa1079860 | 0.827303 | 1.685067e-54 | -8.615850e-47 |
| Msa0082440 | Msa1080960 | 0.808082 | 3.687498e-50 | -8.615850e-47 |
| Msa0082440 | Msa1087980 | 0.804503 | 2.094230e-49 | -8.615850e-47 |
| Msa0082440 | Msa1095790 | 0.808026 | 3.791026e-50 | -8.615850e-47 |
| Msa0082440 | Msa1098890 | 0.812472 | 4.168147e-51 | -8.615850e-47 |
| Msa0082440 | Msa1121110 | 0.817004 | 4.129635e-52 | -8.615850e-47 |
| Msa0082440 | Msa1122780 | 0.830118 | 3.516818e-55 | -8.615850e-47 |
| Msa0082440 | Msa1137570 | 0.811689 | 6.175390e-51 | -8.615850e-47 |
| Msa0082440 | Msa1142670 | 0.818591 | 1.809686e-52 | -8.615850e-47 |
| Msa0082440 | Msa1143850 | 0.821444 | 4.024267e-53 | -8.615850e-47 |
| Msa0082440 | Msa1144750 | 0.836867 | 7.273384e-57 | -8.615850e-47 |
| Msa0082440 | Msa1152950 | 0.806577 | 7.690397e-50 | -8.615850e-47 |
| Msa0082440 | Msa1168590 | 0.807977 | 3.882745e-50 | -8.615850e-47 |
| Msa0082440 | Msa1176270 | 0.806389 | 8.424580e-50 | -8.615850e-47 |
| Msa0082440 | Msa1201640 | 0.831504 | 1.607938e-55 | -8.615850e-47 |
| Msa0082440 | Msa1205370 | 0.804039 | 2.615027e-49 | -8.615850e-47 |
| Msa0082440 | Msa1211340 | 0.856171 | 3.853160e-62 | -8.615850e-47 |
| Msa0082440 | Msa1215070 | 0.810815 | 9.555223e-51 | -8.615850e-47 |
| Msa0082440 | Msa1215920 | 0.815812 | 7.630288e-52 | -8.615850e-47 |
| Msa0082440 | Msa1220870 | 0.803855 | 2.856454e-49 | -8.615850e-47 |
| Msa0082440 | Msa1222450 | 0.807278 | 5.466534e-50 | -8.615850e-47 |
| Msa0082440 | Msa1227330 | 0.809017 | 2.329119e-50 | -8.615850e-47 |
| Msa0082440 | Msa1253450 | 0.835545 | 1.576500e-56 | -8.615850e-47 |
| Msa0082440 | Msa1254620 | 0.812509 | 4.090760e-51 | -8.615850e-47 |
| Msa0082440 | Msa1259640 | 0.854786 | 9.762202e-62 | -8.615850e-47 |
| Msa0082440 | Msa1263290 | -0.813192 | 2.898738e-51 | -8.615850e-47 |
| Msa0082440 | Msa1282500 | 0.816726 | 4.765903e-52 | -8.615850e-47 |
| Msa0082440 | Msa1283740 | 0.809511 | 1.824820e-50 | -8.615850e-47 |
| Msa0082440 | Msa1297290 | 0.804607 | 1.991577e-49 | -8.615850e-47 |
| Msa0082440 | Msa1297530 | 0.819167 | 1.338991e-52 | -8.615850e-47 |
| Msa0082440 | Msa1299330 | 0.814602 | 1.417446e-51 | -8.615850e-47 |
| Msa0082440 | Msa1305200 | 0.831382 | 1.723020e-55 | -8.615850e-47 |
| Msa0082440 | Msa1305350 | 0.839551 | 1.481090e-57 | -8.615850e-47 |
| Msa0082440 | Msa1306850 | 0.802430 | 5.630911e-49 | -8.615850e-47 |
| Msa0082440 | Msa1307550 | 0.824472 | 7.922397e-54 | -8.615850e-47 |
| Msa0082440 | Msa1329790 | 0.856084 | 4.086819e-62 | -8.615850e-47 |
| Msa0082440 | Msa1332000 | 0.817300 | 3.541924e-52 | -8.615850e-47 |
| Msa0082440 | Msa1333420 | 0.818009 | 2.451240e-52 | -8.615850e-47 |
| Msa0082440 | Msa1333730 | 0.830431 | 2.948707e-55 | -8.615850e-47 |
| Msa0082440 | Msa1338250 | 0.817198 | 3.733904e-52 | -8.615850e-47 |
| Msa0082440 | Msa1349450 | 0.803035 | 4.224094e-49 | -8.615850e-47 |
| Msa0082440 | Msa1364430 | 0.809353 | 1.972920e-50 | -8.615850e-47 |
| Msa0082440 | Msa1372290 | 0.825887 | 3.667586e-54 | -8.615850e-47 |
| Msa0082440 | Msa1385000 | 0.802422 | 5.652303e-49 | -8.615850e-47 |
| Msa0082440 | Msa1392700 | 0.817591 | 3.045412e-52 | -8.615850e-47 |
| Msa0082440 | Msa1393820 | 0.809418 | 1.911336e-50 | -8.615850e-47 |
| Msa0082440 | Msa1400120 | 0.801732 | 7.838769e-49 | -8.615850e-47 |
| Msa0082440 | Msa1401460 | 0.836176 | 1.091051e-56 | -8.615850e-47 |
| Msa0082440 | Msa1406490 | 0.801658 | 8.114504e-49 | -8.615850e-47 |
| Msa0082440 | Msa1410690 | 0.811975 | 5.350009e-51 | -8.615850e-47 |
| Msa0082440 | Msa1411980 | 0.800594 | 1.339423e-48 | -8.615850e-47 |
| Msa0082440 | Msa1416260 | 0.804567 | 2.030017e-49 | -8.615850e-47 |
| Msa0082440 | Msa1418260 | 0.825979 | 3.488275e-54 | -8.615850e-47 |
| Msa0082440 | Msa1419990 | 0.803148 | 4.003766e-49 | -8.615850e-47 |
| Msa0082440 | Msa1420250 | 0.856270 | 3.604493e-62 | -8.615850e-47 |
| Msa0082440 | Msa1422430 | 0.802687 | 4.985355e-49 | -8.615850e-47 |
| Msa0082440 | Msa1424680 | 0.807358 | 5.256227e-50 | -8.615850e-47 |
| Msa0082440 | Msa1426910 | 0.850780 | 1.360670e-60 | -8.615850e-47 |
| Msa0082440 | Msa1434040 | 0.806868 | 6.674104e-50 | -8.615850e-47 |
| Msa0082440 | Msa1435260 | 0.836423 | 9.443008e-57 | -8.615850e-47 |
| Msa0082440 | Msa1435270 | 0.801621 | 8.258446e-49 | -8.615850e-47 |
| Msa0082440 | Msa1438520 | 0.809212 | 2.115390e-50 | -8.615850e-47 |
| Msa0082440 | Msa1439710 | 0.800156 | 1.644479e-48 | -8.615850e-47 |
| Msa0082440 | Msa1443060 | 0.808457 | 3.067809e-50 | -8.615850e-47 |
| Msa0082440 | Msa1446780 | 0.816508 | 5.333978e-52 | -8.615850e-47 |
| Msa0082440 | Msa1449520 | 0.823901 | 1.078924e-53 | -8.615850e-47 |
| Msa0082440 | Msa1450720 | 0.803296 | 3.729451e-49 | -8.615850e-47 |
| Msa0082440 | Msa1454960 | 0.812566 | 3.974029e-51 | -8.615850e-47 |
| Msa0082440 | Msa1462360 | 0.800280 | 1.552355e-48 | -8.615850e-47 |
| Msa0082440 | Msa1462930 | 0.825443 | 4.674512e-54 | -8.615850e-47 |
| Msa0082440 | Msa1466590 | 0.837299 | 5.641499e-57 | -8.615850e-47 |
| Msa0082440 | Msa1467000 | 0.854967 | 8.647711e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082440 | MtrunA17_Chr1g0185871 | 97.753 | 89 | 2 | 0 | 1 | 89 | 1 | 89 | 5.78e-56 | 185 |
| Msa0082440 | MtrunA17_Chr0c12g0493661 | 46.429 | 56 | 28 | 1 | 37 | 90 | 31 | 86 | 2.85e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082440 | AT3G24180.1 | 75.904 | 83 | 20 | 0 | 7 | 89 | 1 | 83 | 5.09e-41 | 143 |
| Msa0082440 | AT3G24180.2 | 75.904 | 83 | 20 | 0 | 7 | 89 | 1 | 83 | 5.09e-41 | 143 |
Find 37 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAAATTCTTTAAGAAGAT+TGG | 0.284924 | 1_2:+61298768 | None:intergenic |
| TTATGAAAATCGCAAGATAT+TGG | 0.288051 | 1_2:+61299643 | None:intergenic |
| CTTCTTCTCCAAGCTTGTTC+AGG | 0.312960 | 1_2:+61298805 | None:intergenic |
| CCACGCTGACTCGGTGTTAC+AGG | 0.326472 | 1_2:-61299711 | Msa0082440:five_prime_UTR |
| TTGAAATTCCAGGTTCGATT+AGG | 0.338785 | 1_2:-61298528 | Msa0082440:intron |
| AAGATCGTTGAACAATATCT+AGG | 0.389015 | 1_2:-61299487 | Msa0082440:five_prime_UTR |
| TATGAGAGATTTGGAAAGAA+TGG | 0.409194 | 1_2:-61299455 | Msa0082440:CDS |
| TACGAATGTGGTCATATGTC+AGG | 0.415745 | 1_2:-61298503 | Msa0082440:CDS |
| TTCGCCACGCCACGCTGACT+CGG | 0.451063 | 1_2:-61299720 | Msa0082440:five_prime_UTR |
| CTTCTCCAAGCTTGTTCAGG+AGG | 0.456855 | 1_2:+61298808 | None:intergenic |
| TTCATTGTAGAAAGAATTCG+TGG | 0.473789 | 1_2:-61299417 | Msa0082440:CDS |
| CTGCTCCTCCTGAACAAGCT+TGG | 0.474967 | 1_2:-61298813 | Msa0082440:CDS |
| AACATAACATACCAACTGTA+AGG | 0.499287 | 1_2:+61299366 | None:intergenic |
| AAAATCGCAAGATATTGGAT+TGG | 0.509724 | 1_2:+61299648 | None:intergenic |
| AAATCGCAAGATATTGGATT+GGG | 0.518761 | 1_2:+61299649 | None:intergenic |
| GTGTGAAGAAAGAGATTGTT+GGG | 0.525413 | 1_2:+61299617 | None:intergenic |
| GTCAGGGAAGAGGCTTCTCA+TGG | 0.537322 | 1_2:-61298486 | Msa0082440:CDS |
| ATTCTTTAAGAAGATTGGCA+TGG | 0.539896 | 1_2:+61298773 | None:intergenic |
| CTCTCCGTAGCGATCCGAGT+TGG | 0.547095 | 1_2:-61299759 | Msa0082440:five_prime_UTR |
| GGGAAGAGGCTTCTCATGGA+AGG | 0.551137 | 1_2:-61298482 | Msa0082440:CDS |
| TTATTGATATACTCTTCGGT+AGG | 0.572408 | 1_2:+61299394 | None:intergenic |
| GTGGTCATATGTCAGGGAAG+AGG | 0.576804 | 1_2:-61298496 | Msa0082440:CDS |
| AATGATGGCGTGGCGAGATG+AGG | 0.577897 | 1_2:+61299680 | None:intergenic |
| CAATAAAACCACCTTACAGT+TGG | 0.581904 | 1_2:-61299377 | Msa0082440:intron |
| GTTACCAACTCGGATCGCTA+CGG | 0.588342 | 1_2:+61299755 | None:intergenic |
| TGTGTGAAGAAAGAGATTGT+TGG | 0.601025 | 1_2:+61299616 | None:intergenic |
| GATTGGGTGCAGAAGAATGA+TGG | 0.601410 | 1_2:+61299665 | None:intergenic |
| GATTTGGAAAGAATGGTTAG+CGG | 0.622055 | 1_2:-61299448 | Msa0082440:CDS |
| ACGAATGTGGTCATATGTCA+GGG | 0.622718 | 1_2:-61298502 | Msa0082440:CDS |
| GGAAGAGGCTTCTCATGGAA+GGG | 0.626324 | 1_2:-61298481 | Msa0082440:CDS |
| TTCGATTAGGTATACGAATG+TGG | 0.629570 | 1_2:-61298515 | Msa0082440:CDS |
| AACACCGAGTCAGCGTGGCG+TGG | 0.632482 | 1_2:+61299716 | None:intergenic |
| CGCTGACTCGGTGTTACAGG+CGG | 0.657553 | 1_2:-61299708 | Msa0082440:five_prime_UTR |
| CCTGTAACACCGAGTCAGCG+TGG | 0.682034 | 1_2:+61299711 | None:intergenic |
| ATAACATACCAACTGTAAGG+TGG | 0.689223 | 1_2:+61299369 | None:intergenic |
| GGTGCAGAAGAATGATGGCG+TGG | 0.728152 | 1_2:+61299670 | None:intergenic |
| AGTTTGATGAGTTACCAACT+CGG | 0.762021 | 1_2:+61299745 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAACTACTAATATTTTCA+GGG | + | chr1_2:61298495-61298514 | None:intergenic | 15.0% |
| !!! | AATTAACTACTAATATTTTC+AGG | + | chr1_2:61298496-61298515 | None:intergenic | 15.0% |
| !!! | AATTCAAAAGTACAAAAAAA+TGG | + | chr1_2:61299702-61299721 | None:intergenic | 15.0% |
| !!! | ATTAACTACTAATATTTTCA+GGG | + | chr1_2:61298495-61298514 | None:intergenic | 15.0% |
| !!! | AATTAACTACTAATATTTTC+AGG | + | chr1_2:61298496-61298515 | None:intergenic | 15.0% |
| !!! | AATTCAAAAGTACAAAAAAA+TGG | + | chr1_2:61299702-61299721 | None:intergenic | 15.0% |
| !! | CACTAAAAAAAGGAATAAAA+AGG | - | chr1_2:61298464-61298483 | Msa0082440:CDS | 20.0% |
| !!! | TTTTATTGTTATGAGAGATT+TGG | - | chr1_2:61298839-61298858 | Msa0082440:intron | 20.0% |
| !! | AATAATTAACATAAGCTAGT+TGG | + | chr1_2:61298975-61298994 | None:intergenic | 20.0% |
| !! | AATTCAATGATTTAGTTGAT+CGG | - | chr1_2:61299008-61299027 | Msa0082440:intron | 20.0% |
| !!! | AATTCAATTTTCAAATCACA+AGG | + | chr1_2:61299107-61299126 | None:intergenic | 20.0% |
| !! | TGTGATTTGAAAATTGAATT+TGG | - | chr1_2:61299107-61299126 | Msa0082440:intron | 20.0% |
| !!! | CTCTTTTGTTAGTAATTTTA+TGG | - | chr1_2:61299263-61299282 | Msa0082440:intron | 20.0% |
| !!! | TCTAAATTCTTTAAGAAGAT+TGG | + | chr1_2:61299538-61299557 | None:intergenic | 20.0% |
| !!! | AGAATTTAGAGTAACTTTTA+TGG | - | chr1_2:61299548-61299567 | Msa0082440:five_prime_UTR | 20.0% |
| !!! | GATTTACTAGTTTGATATAT+CGG | - | chr1_2:61299633-61299652 | Msa0082440:five_prime_UTR | 20.0% |
| !! | TAATTAATAAGCATATGCAA+AGG | + | chr1_2:61299662-61299681 | None:intergenic | 20.0% |
| !! | CACTAAAAAAAGGAATAAAA+AGG | - | chr1_2:61298464-61298483 | Msa0082440:CDS | 20.0% |
| !!! | TTTTATTGTTATGAGAGATT+TGG | - | chr1_2:61298839-61298858 | Msa0082440:intron | 20.0% |
| !! | AATAATTAACATAAGCTAGT+TGG | + | chr1_2:61298975-61298994 | None:intergenic | 20.0% |
| !! | AATTCAATGATTTAGTTGAT+CGG | - | chr1_2:61299008-61299027 | Msa0082440:intron | 20.0% |
| !!! | AATTCAATTTTCAAATCACA+AGG | + | chr1_2:61299107-61299126 | None:intergenic | 20.0% |
| !! | TGTGATTTGAAAATTGAATT+TGG | - | chr1_2:61299107-61299126 | Msa0082440:intron | 20.0% |
| !!! | CTCTTTTGTTAGTAATTTTA+TGG | - | chr1_2:61299263-61299282 | Msa0082440:intron | 20.0% |
| !!! | TCTAAATTCTTTAAGAAGAT+TGG | + | chr1_2:61299538-61299557 | None:intergenic | 20.0% |
| !!! | AGAATTTAGAGTAACTTTTA+TGG | - | chr1_2:61299548-61299567 | Msa0082440:five_prime_UTR | 20.0% |
| !!! | GATTTACTAGTTTGATATAT+CGG | - | chr1_2:61299633-61299652 | Msa0082440:five_prime_UTR | 20.0% |
| !! | TAATTAATAAGCATATGCAA+AGG | + | chr1_2:61299662-61299681 | None:intergenic | 20.0% |
| ! | AAAAAAGGAATAAAAAGGCA+TGG | - | chr1_2:61298469-61298488 | Msa0082440:CDS | 25.0% |
| ! | TTATGAAAATCGCAAGATAT+TGG | + | chr1_2:61298663-61298682 | None:intergenic | 25.0% |
| ! | ATCTTCAAAAAAACAGAATC+TGG | + | chr1_2:61298801-61298820 | None:intergenic | 25.0% |
| !!! | GGTTTTATTGATATACTCTT+CGG | + | chr1_2:61298916-61298935 | None:intergenic | 25.0% |
| ! | TTCAATGGTAATTACCTAAT+AGG | + | chr1_2:61299167-61299186 | None:intergenic | 25.0% |
| ! | ACTATTTGCTCGAAAATAAA+AGG | - | chr1_2:61299374-61299393 | Msa0082440:intron | 25.0% |
| ! | AAATAAAAGGAAGGAAACAA+CGG | - | chr1_2:61299387-61299406 | Msa0082440:CDS | 25.0% |
| ! | TCAATATCAAACTGCAAAAA+AGG | + | chr1_2:61299465-61299484 | None:intergenic | 25.0% |
| !! | TTTTATGGAAGCTATAAAGA+TGG | - | chr1_2:61299563-61299582 | Msa0082440:five_prime_UTR | 25.0% |
| ! | GAAATTGAAATTGAAATTCC+AGG | - | chr1_2:61299765-61299784 | Msa0082440:five_prime_UTR | 25.0% |
| ! | AAAAAAGGAATAAAAAGGCA+TGG | - | chr1_2:61298469-61298488 | Msa0082440:CDS | 25.0% |
| ! | TTATGAAAATCGCAAGATAT+TGG | + | chr1_2:61298663-61298682 | None:intergenic | 25.0% |
| ! | ATCTTCAAAAAAACAGAATC+TGG | + | chr1_2:61298801-61298820 | None:intergenic | 25.0% |
| !!! | GGTTTTATTGATATACTCTT+CGG | + | chr1_2:61298916-61298935 | None:intergenic | 25.0% |
| ! | TTCAATGGTAATTACCTAAT+AGG | + | chr1_2:61299167-61299186 | None:intergenic | 25.0% |
| ! | ACTATTTGCTCGAAAATAAA+AGG | - | chr1_2:61299374-61299393 | Msa0082440:intron | 25.0% |
| ! | AAATAAAAGGAAGGAAACAA+CGG | - | chr1_2:61299387-61299406 | Msa0082440:CDS | 25.0% |
| ! | TCAATATCAAACTGCAAAAA+AGG | + | chr1_2:61299465-61299484 | None:intergenic | 25.0% |
| !! | TTTTATGGAAGCTATAAAGA+TGG | - | chr1_2:61299563-61299582 | Msa0082440:five_prime_UTR | 25.0% |
| ! | GAAATTGAAATTGAAATTCC+AGG | - | chr1_2:61299765-61299784 | Msa0082440:five_prime_UTR | 25.0% |
| AAATCGCAAGATATTGGATT+GGG | + | chr1_2:61298657-61298676 | None:intergenic | 30.0% | |
| AAAATCGCAAGATATTGGAT+TGG | + | chr1_2:61298658-61298677 | None:intergenic | 30.0% | |
| AAGATCGTTGAACAATATCT+AGG | - | chr1_2:61298816-61298835 | Msa0082440:CDS | 30.0% | |
| TATGAGAGATTTGGAAAGAA+TGG | - | chr1_2:61298848-61298867 | Msa0082440:intron | 30.0% | |
| TTCATTGTAGAAAGAATTCG+TGG | - | chr1_2:61298886-61298905 | Msa0082440:intron | 30.0% | |
| TTATTGATATACTCTTCGGT+AGG | + | chr1_2:61298912-61298931 | None:intergenic | 30.0% | |
| AACATAACATACCAACTGTA+AGG | + | chr1_2:61298940-61298959 | None:intergenic | 30.0% | |
| GAATATATTAGCCACCTATT+AGG | - | chr1_2:61299150-61299169 | Msa0082440:intron | 30.0% | |
| AATGGTAATTACCTAATAGG+TGG | + | chr1_2:61299164-61299183 | None:intergenic | 30.0% | |
| !! | CATTCAAGTTGTTCATTCAA+TGG | + | chr1_2:61299182-61299201 | None:intergenic | 30.0% |
| ACTAACTTAAGACACATTTG+AGG | - | chr1_2:61299327-61299346 | Msa0082440:intron | 30.0% | |
| TTTGCTCGAAAATAAAAGGA+AGG | - | chr1_2:61299378-61299397 | Msa0082440:CDS | 30.0% | |
| TAAAAGAGACACAGATTATG+AGG | + | chr1_2:61299442-61299461 | None:intergenic | 30.0% | |
| ! | ATTCTTTAAGAAGATTGGCA+TGG | + | chr1_2:61299533-61299552 | None:intergenic | 30.0% |
| GATAACAAGTTACAATAACG+CGG | - | chr1_2:61299611-61299630 | Msa0082440:five_prime_UTR | 30.0% | |
| AAATCGCAAGATATTGGATT+GGG | + | chr1_2:61298657-61298676 | None:intergenic | 30.0% | |
| AAAATCGCAAGATATTGGAT+TGG | + | chr1_2:61298658-61298677 | None:intergenic | 30.0% | |
| AAGATCGTTGAACAATATCT+AGG | - | chr1_2:61298816-61298835 | Msa0082440:CDS | 30.0% | |
| TATGAGAGATTTGGAAAGAA+TGG | - | chr1_2:61298848-61298867 | Msa0082440:intron | 30.0% | |
| TTCATTGTAGAAAGAATTCG+TGG | - | chr1_2:61298886-61298905 | Msa0082440:intron | 30.0% | |
| TTATTGATATACTCTTCGGT+AGG | + | chr1_2:61298912-61298931 | None:intergenic | 30.0% | |
| AACATAACATACCAACTGTA+AGG | + | chr1_2:61298940-61298959 | None:intergenic | 30.0% | |
| GAATATATTAGCCACCTATT+AGG | - | chr1_2:61299150-61299169 | Msa0082440:intron | 30.0% | |
| AATGGTAATTACCTAATAGG+TGG | + | chr1_2:61299164-61299183 | None:intergenic | 30.0% | |
| !! | CATTCAAGTTGTTCATTCAA+TGG | + | chr1_2:61299182-61299201 | None:intergenic | 30.0% |
| ACTAACTTAAGACACATTTG+AGG | - | chr1_2:61299327-61299346 | Msa0082440:intron | 30.0% | |
| TTTGCTCGAAAATAAAAGGA+AGG | - | chr1_2:61299378-61299397 | Msa0082440:CDS | 30.0% | |
| TAAAAGAGACACAGATTATG+AGG | + | chr1_2:61299442-61299461 | None:intergenic | 30.0% | |
| ! | ATTCTTTAAGAAGATTGGCA+TGG | + | chr1_2:61299533-61299552 | None:intergenic | 30.0% |
| GATAACAAGTTACAATAACG+CGG | - | chr1_2:61299611-61299630 | Msa0082440:five_prime_UTR | 30.0% | |
| AGTTTGATGAGTTACCAACT+CGG | + | chr1_2:61298561-61298580 | None:intergenic | 35.0% | |
| GTGTGAAGAAAGAGATTGTT+GGG | + | chr1_2:61298689-61298708 | None:intergenic | 35.0% | |
| TGTGTGAAGAAAGAGATTGT+TGG | + | chr1_2:61298690-61298709 | None:intergenic | 35.0% | |
| GATTTGGAAAGAATGGTTAG+CGG | - | chr1_2:61298855-61298874 | Msa0082440:intron | 35.0% | |
| CAATAAAACCACCTTACAGT+TGG | - | chr1_2:61298926-61298945 | Msa0082440:intron | 35.0% | |
| ATAACATACCAACTGTAAGG+TGG | + | chr1_2:61298937-61298956 | None:intergenic | 35.0% | |
| ! | GGATTGTTGAATTTTCTTCG+AGG | - | chr1_2:61299128-61299147 | Msa0082440:intron | 35.0% |
| ATGAACAACTTGAATGTGTG+AGG | - | chr1_2:61299186-61299205 | Msa0082440:intron | 35.0% | |
| ! | CTGAGCATGTGTTTGAAATT+TGG | + | chr1_2:61299239-61299258 | None:intergenic | 35.0% |
| CAAATTTCAAACACATGCTC+AGG | - | chr1_2:61299237-61299256 | Msa0082440:intron | 35.0% | |
| ! | TTTATGGACTAAATTGACCG+AGG | - | chr1_2:61299279-61299298 | Msa0082440:intron | 35.0% |
| ! | TCTTCGAATGTGTTTTTCCT+CGG | + | chr1_2:61299299-61299318 | None:intergenic | 35.0% |
| TTGAAATTCCAGGTTCGATT+AGG | - | chr1_2:61299775-61299794 | Msa0082440:five_prime_UTR | 35.0% | |
| TTCGATTAGGTATACGAATG+TGG | - | chr1_2:61299788-61299807 | Msa0082440:five_prime_UTR | 35.0% | |
| AGTTTGATGAGTTACCAACT+CGG | + | chr1_2:61298561-61298580 | None:intergenic | 35.0% | |
| GTGTGAAGAAAGAGATTGTT+GGG | + | chr1_2:61298689-61298708 | None:intergenic | 35.0% | |
| TGTGTGAAGAAAGAGATTGT+TGG | + | chr1_2:61298690-61298709 | None:intergenic | 35.0% | |
| GATTTGGAAAGAATGGTTAG+CGG | - | chr1_2:61298855-61298874 | Msa0082440:intron | 35.0% | |
| CAATAAAACCACCTTACAGT+TGG | - | chr1_2:61298926-61298945 | Msa0082440:intron | 35.0% | |
| ATAACATACCAACTGTAAGG+TGG | + | chr1_2:61298937-61298956 | None:intergenic | 35.0% | |
| ! | GGATTGTTGAATTTTCTTCG+AGG | - | chr1_2:61299128-61299147 | Msa0082440:intron | 35.0% |
| ATGAACAACTTGAATGTGTG+AGG | - | chr1_2:61299186-61299205 | Msa0082440:intron | 35.0% | |
| ! | CTGAGCATGTGTTTGAAATT+TGG | + | chr1_2:61299239-61299258 | None:intergenic | 35.0% |
| CAAATTTCAAACACATGCTC+AGG | - | chr1_2:61299237-61299256 | Msa0082440:intron | 35.0% | |
| ! | TTTATGGACTAAATTGACCG+AGG | - | chr1_2:61299279-61299298 | Msa0082440:intron | 35.0% |
| ! | TCTTCGAATGTGTTTTTCCT+CGG | + | chr1_2:61299299-61299318 | None:intergenic | 35.0% |
| TTGAAATTCCAGGTTCGATT+AGG | - | chr1_2:61299775-61299794 | Msa0082440:five_prime_UTR | 35.0% | |
| TTCGATTAGGTATACGAATG+TGG | - | chr1_2:61299788-61299807 | Msa0082440:five_prime_UTR | 35.0% | |
| TTCGTATACCTAATCGAACC+TGG | + | chr1_2:61299786-61299805 | None:intergenic | 40.0% | |
| TACGAATGTGGTCATATGTC+AGG | - | chr1_2:61299800-61299819 | Msa0082440:five_prime_UTR | 40.0% | |
| ACGAATGTGGTCATATGTCA+GGG | - | chr1_2:61299801-61299820 | Msa0082440:five_prime_UTR | 40.0% | |
| TTCGTATACCTAATCGAACC+TGG | + | chr1_2:61299786-61299805 | None:intergenic | 40.0% | |
| TACGAATGTGGTCATATGTC+AGG | - | chr1_2:61299800-61299819 | Msa0082440:five_prime_UTR | 40.0% | |
| ACGAATGTGGTCATATGTCA+GGG | - | chr1_2:61299801-61299820 | Msa0082440:five_prime_UTR | 40.0% | |
| GATTGGGTGCAGAAGAATGA+TGG | + | chr1_2:61298641-61298660 | None:intergenic | 45.0% | |
| ! | CTTCTTCTCCAAGCTTGTTC+AGG | + | chr1_2:61299501-61299520 | None:intergenic | 45.0% |
| GATTGGGTGCAGAAGAATGA+TGG | + | chr1_2:61298641-61298660 | None:intergenic | 45.0% | |
| ! | CTTCTTCTCCAAGCTTGTTC+AGG | + | chr1_2:61299501-61299520 | None:intergenic | 45.0% |
| GTTACCAACTCGGATCGCTA+CGG | + | chr1_2:61298551-61298570 | None:intergenic | 50.0% | |
| ! | GAATGTGTGAGGCGCTATCA+CGG | - | chr1_2:61299197-61299216 | Msa0082440:intron | 50.0% |
| ! | CTTCTCCAAGCTTGTTCAGG+AGG | + | chr1_2:61299498-61299517 | None:intergenic | 50.0% |
| GTGGTCATATGTCAGGGAAG+AGG | - | chr1_2:61299807-61299826 | Msa0082440:five_prime_UTR | 50.0% | |
| GGAAGAGGCTTCTCATGGAA+GGG | - | chr1_2:61299822-61299841 | Msa0082440:five_prime_UTR | 50.0% | |
| GTTACCAACTCGGATCGCTA+CGG | + | chr1_2:61298551-61298570 | None:intergenic | 50.0% | |
| ! | GAATGTGTGAGGCGCTATCA+CGG | - | chr1_2:61299197-61299216 | Msa0082440:intron | 50.0% |
| ! | CTTCTCCAAGCTTGTTCAGG+AGG | + | chr1_2:61299498-61299517 | None:intergenic | 50.0% |
| GTGGTCATATGTCAGGGAAG+AGG | - | chr1_2:61299807-61299826 | Msa0082440:five_prime_UTR | 50.0% | |
| GGAAGAGGCTTCTCATGGAA+GGG | - | chr1_2:61299822-61299841 | Msa0082440:five_prime_UTR | 50.0% | |
| ! | AATGATGGCGTGGCGAGATG+AGG | + | chr1_2:61298626-61298645 | None:intergenic | 55.0% |
| ! | GGTGCAGAAGAATGATGGCG+TGG | + | chr1_2:61298636-61298655 | None:intergenic | 55.0% |
| CTGCTCCTCCTGAACAAGCT+TGG | - | chr1_2:61299490-61299509 | Msa0082440:five_prime_UTR | 55.0% | |
| GTCAGGGAAGAGGCTTCTCA+TGG | - | chr1_2:61299817-61299836 | Msa0082440:five_prime_UTR | 55.0% | |
| GGGAAGAGGCTTCTCATGGA+AGG | - | chr1_2:61299821-61299840 | Msa0082440:five_prime_UTR | 55.0% | |
| ! | AATGATGGCGTGGCGAGATG+AGG | + | chr1_2:61298626-61298645 | None:intergenic | 55.0% |
| ! | GGTGCAGAAGAATGATGGCG+TGG | + | chr1_2:61298636-61298655 | None:intergenic | 55.0% |
| CTGCTCCTCCTGAACAAGCT+TGG | - | chr1_2:61299490-61299509 | Msa0082440:five_prime_UTR | 55.0% | |
| GTCAGGGAAGAGGCTTCTCA+TGG | - | chr1_2:61299817-61299836 | Msa0082440:five_prime_UTR | 55.0% | |
| GGGAAGAGGCTTCTCATGGA+AGG | - | chr1_2:61299821-61299840 | Msa0082440:five_prime_UTR | 55.0% | |
| CTCTCCGTAGCGATCCGAGT+TGG | - | chr1_2:61298544-61298563 | Msa0082440:intron | 60.0% | |
| CCTGTAACACCGAGTCAGCG+TGG | + | chr1_2:61298595-61298614 | None:intergenic | 60.0% | |
| !! | CCACGCTGACTCGGTGTTAC+AGG | - | chr1_2:61298592-61298611 | Msa0082440:intron | 60.0% |
| !! | CGCTGACTCGGTGTTACAGG+CGG | - | chr1_2:61298595-61298614 | Msa0082440:intron | 60.0% |
| ! | TGTGTGAGGCGCTATCACGG+TGG | - | chr1_2:61299200-61299219 | Msa0082440:intron | 60.0% |
| CTCTCCGTAGCGATCCGAGT+TGG | - | chr1_2:61298544-61298563 | Msa0082440:intron | 60.0% | |
| CCTGTAACACCGAGTCAGCG+TGG | + | chr1_2:61298595-61298614 | None:intergenic | 60.0% | |
| !! | CCACGCTGACTCGGTGTTAC+AGG | - | chr1_2:61298592-61298611 | Msa0082440:intron | 60.0% |
| !! | CGCTGACTCGGTGTTACAGG+CGG | - | chr1_2:61298595-61298614 | Msa0082440:intron | 60.0% |
| ! | TGTGTGAGGCGCTATCACGG+TGG | - | chr1_2:61299200-61299219 | Msa0082440:intron | 60.0% |
| ! | TTCGCCACGCCACGCTGACT+CGG | - | chr1_2:61298583-61298602 | Msa0082440:intron | 65.0% |
| AACACCGAGTCAGCGTGGCG+TGG | + | chr1_2:61298590-61298609 | None:intergenic | 65.0% | |
| ! | TTCGCCACGCCACGCTGACT+CGG | - | chr1_2:61298583-61298602 | Msa0082440:intron | 65.0% |
| AACACCGAGTCAGCGTGGCG+TGG | + | chr1_2:61298590-61298609 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 61298464 | 61299861 | 61298464 | ID=Msa0082440;Name=Msa0082440 |
| chr1_2 | mRNA | 61298464 | 61299861 | 61298464 | ID=Msa0082440-mRNA-1;Parent=Msa0082440;Name=Msa0082440-mRNA-1;_AED=0.00;_eAED=0.00;_QI=385|1|0.66|1|1|1|3|0|95 |
| chr1_2 | exon | 61298464 | 61298538 | 61298464 | ID=Msa0082440-mRNA-1:exon:20299;Parent=Msa0082440-mRNA-1 |
| chr1_2 | exon | 61298741 | 61298851 | 61298741 | ID=Msa0082440-mRNA-1:exon:20298;Parent=Msa0082440-mRNA-1 |
| chr1_2 | exon | 61299378 | 61299861 | 61299378 | ID=Msa0082440-mRNA-1:exon:20297;Parent=Msa0082440-mRNA-1 |
| chr1_2 | five_prime_UTR | 61299477 | 61299861 | 61299477 | ID=Msa0082440-mRNA-1:five_prime_utr;Parent=Msa0082440-mRNA-1 |
| chr1_2 | CDS | 61299378 | 61299476 | 61299378 | ID=Msa0082440-mRNA-1:cds;Parent=Msa0082440-mRNA-1 |
| chr1_2 | CDS | 61298741 | 61298851 | 61298741 | ID=Msa0082440-mRNA-1:cds;Parent=Msa0082440-mRNA-1 |
| chr1_2 | CDS | 61298464 | 61298538 | 61298464 | ID=Msa0082440-mRNA-1:cds;Parent=Msa0082440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
