AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0553930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553930 MtrunA17_Chr4g0039781 97.064 613 18 0 1 613 1 613 0.0 1227
Msa0553930 MtrunA17_Chr6g0450161 70.540 611 173 3 1 611 1 604 0.0 845
Msa0553930 MtrunA17_Chr5g0404291 58.874 586 218 4 26 607 58 624 0.0 673
Msa0553930 MtrunA17_Chr4g0038101 34.641 153 94 4 368 515 758 909 3.52e-16 82.8
Msa0553930 MtrunA17_Chr8g0387641 32.680 153 97 3 368 515 557 708 4.35e-16 82.0
Msa0553930 MtrunA17_Chr2g0289231 33.136 169 107 5 355 520 329 494 4.72e-16 81.6
Msa0553930 MtrunA17_Chr5g0397121 29.327 208 116 6 368 570 549 730 2.05e-15 80.1
Msa0553930 MtrunA17_Chr1g0204031 30.660 212 107 7 368 570 594 774 2.75e-15 79.7
Msa0553930 MtrunA17_Chr3g0127431 33.113 151 96 4 367 513 120 269 3.61e-15 77.8
Msa0553930 MtrunA17_Chr2g0327121 31.288 163 104 5 360 515 508 669 4.98e-15 79.0
Msa0553930 MtrunA17_Chr7g0264521 31.288 163 104 5 360 515 507 668 5.53e-15 78.6
Msa0553930 MtrunA17_Chr7g0264521 30.058 173 102 7 345 512 231 389 2.13e-13 73.6
Msa0553930 MtrunA17_Chr4g0026631 27.885 208 121 5 368 571 162 344 6.73e-15 77.4
Msa0553930 MtrunA17_Chr2g0321241 27.404 208 122 5 368 571 167 349 8.02e-15 77.0
Msa0553930 MtrunA17_Chr1g0180791 31.288 163 104 5 360 515 506 667 1.02e-14 77.8
Msa0553930 MtrunA17_Chr1g0180791 30.058 173 102 7 345 512 230 388 7.06e-13 72.0
Msa0553930 MtrunA17_Chr1g0192151 31.884 207 116 7 324 512 154 353 1.05e-14 76.6
Msa0553930 MtrunA17_Chr4g0014731 31.884 207 116 7 324 512 155 354 1.42e-14 76.3
Msa0553930 MtrunA17_Chr6g0462581 29.187 209 114 6 368 570 536 716 1.98e-14 77.0
Msa0553930 MtrunA17_Chr1g0202381 33.987 153 95 4 368 515 505 656 2.26e-14 76.6
Msa0553930 MtrunA17_Chr3g0116131 30.000 210 112 6 368 570 939 1120 2.26e-14 77.0
Msa0553930 MtrunA17_Chr8g0345461 31.638 177 101 6 343 512 188 351 2.41e-14 75.5
Msa0553930 MtrunA17_Chr1g0200081 31.638 177 101 6 343 512 198 361 2.68e-14 75.5
Msa0553930 MtrunA17_Chr1g0195731 29.048 210 114 6 368 570 971 1152 3.20e-14 76.3
Msa0553930 MtrunA17_Chr3g0127401 33.766 154 91 5 367 513 117 266 4.70e-14 74.3
Msa0553930 MtrunA17_Chr1g0195741 29.048 210 114 6 368 570 975 1156 4.88e-14 75.9
Msa0553930 MtrunA17_Chr3g0141901 29.944 177 104 6 343 512 159 322 5.97e-14 73.9
Msa0553930 MtrunA17_Chr3g0145011 29.944 177 104 6 343 512 162 325 1.13e-13 73.2
Msa0553930 MtrunA17_Chr4g0050561 33.113 151 92 5 370 512 194 343 2.97e-13 72.0
Msa0553930 MtrunA17_Chr3g0135761 29.091 220 116 9 370 579 259 448 9.93e-13 71.2
Msa0553930 MtrunA17_Chr4g0004121 25.943 212 120 6 368 568 277 462 1.85e-12 70.1
Msa0553930 MtrunA17_Chr1g0158881 28.761 226 126 8 370 588 366 563 2.16e-12 70.1
Msa0553930 MtrunA17_Chr3g0135721 30.000 220 114 9 370 579 261 450 2.49e-12 70.1
Msa0553930 MtrunA17_Chr7g0246111 31.206 141 94 2 368 505 247 387 7.87e-12 68.2
Msa0553930 MtrunA17_Chr8g0357301 30.769 156 92 6 370 512 507 659 1.67e-11 67.4
Msa0553930 MtrunA17_Chr6g0459561 24.696 247 152 6 367 602 416 639 2.62e-11 66.6
Msa0553930 MtrunA17_Chr4g0033451 28.692 237 125 11 365 583 413 623 6.85e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553930 AT5G16930.1 68.388 639 171 4 1 609 1 638 0.0 866
Msa0553930 AT3G03060.1 73.519 574 149 1 36 609 56 626 0.0 856
Msa0553930 AT2G18330.1 59.291 592 231 4 25 606 37 628 0.0 662
Msa0553930 AT4G36580.1 59.785 557 218 4 54 606 68 622 0.0 639
Msa0553930 AT3G19740.1 31.776 214 112 7 368 576 738 922 2.65e-18 89.7
Msa0553930 AT1G50140.3 31.308 214 113 7 368 576 748 932 2.63e-17 86.7
Msa0553930 AT1G50140.1 31.308 214 113 7 368 576 748 932 2.63e-17 86.7
Msa0553930 AT1G50140.4 31.308 214 113 7 368 576 748 932 2.63e-17 86.7
Msa0553930 AT1G50140.2 31.308 214 113 7 368 576 726 910 2.89e-17 86.7
Msa0553930 AT1G50140.5 31.308 214 113 7 368 576 726 910 2.89e-17 86.7
Msa0553930 AT5G53540.1 35.065 154 89 4 367 513 120 269 1.34e-15 79.7
Msa0553930 AT4G04180.2 33.146 178 108 5 355 529 343 512 1.57e-15 80.5
Msa0553930 AT4G04180.1 33.146 178 108 5 355 529 348 517 1.61e-15 80.5
Msa0553930 AT1G53780.2 32.105 190 109 6 330 512 368 544 1.77e-15 80.5
Msa0553930 AT4G28000.3 28.063 253 132 8 368 612 553 763 1.91e-15 80.5
Msa0553930 AT1G53780.1 32.105 190 109 6 330 512 347 523 2.05e-15 80.1
Msa0553930 AT1G53780.4 32.105 190 109 6 330 512 347 523 2.05e-15 80.1
Msa0553930 AT1G53780.3 32.105 190 109 6 330 512 346 522 2.10e-15 80.1
Msa0553930 AT4G28000.1 28.063 253 132 8 368 612 551 761 2.72e-15 80.1
Msa0553930 AT4G28000.2 28.063 253 132 8 368 612 553 763 2.75e-15 80.1
Msa0553930 AT3G53230.1 31.902 163 103 6 360 515 506 667 5.96e-15 79.0
Msa0553930 AT3G53230.1 30.058 173 102 7 345 512 230 388 3.62e-13 73.2
Msa0553930 AT5G03340.1 32.515 163 102 6 360 515 505 666 6.10e-15 79.0
Msa0553930 AT5G03340.1 30.058 173 102 7 345 512 229 387 8.27e-13 72.0
Msa0553930 AT1G02890.1 30.000 210 112 6 368 570 978 1159 7.50e-15 79.0
Msa0553930 AT3G09840.1 29.469 207 123 8 325 515 468 667 1.29e-14 77.8
Msa0553930 AT3G09840.1 30.058 173 102 7 345 512 229 387 7.78e-13 72.0
Msa0553930 AT1G64110.1 31.410 156 95 4 368 515 549 700 1.43e-14 77.8
Msa0553930 AT1G64110.5 33.117 154 95 4 368 515 552 703 1.48e-14 77.8
Msa0553930 AT1G64110.3 33.117 154 95 4 368 515 552 703 1.48e-14 77.8
Msa0553930 AT1G64110.2 31.410 156 95 4 368 515 554 705 1.55e-14 77.8
Msa0553930 AT1G64110.4 31.410 156 95 4 368 515 554 705 1.55e-14 77.8
Msa0553930 AT1G53750.1 31.053 190 111 6 330 512 175 351 3.21e-14 75.5
Msa0553930 AT1G45000.1 29.944 177 104 6 343 512 159 322 3.30e-14 75.5
Msa0553930 AT5G52882.1 31.410 156 95 4 368 515 550 701 4.72e-14 76.3
Msa0553930 AT4G02480.1 29.524 210 113 6 368 570 997 1178 6.10e-14 75.9
Msa0553930 AT3G05530.1 31.401 207 117 7 324 512 155 354 9.00e-14 74.3
Msa0553930 AT2G27600.1 30.667 150 99 3 368 513 164 312 9.39e-14 74.3
Msa0553930 AT1G09100.1 31.034 203 123 5 324 512 154 353 1.01e-13 73.9
Msa0553930 AT5G19990.1 33.113 151 92 5 370 512 196 345 1.06e-13 73.9
Msa0553930 AT5G19990.3 33.113 151 92 5 370 512 196 345 1.06e-13 73.9
Msa0553930 AT5G19990.2 33.113 151 92 5 370 512 138 287 1.10e-13 73.6
Msa0553930 AT4G27680.1 32.468 154 93 4 367 513 117 266 1.25e-13 73.6
Msa0553930 AT5G20000.1 33.113 151 92 5 370 512 196 345 1.46e-13 73.6
Msa0553930 AT5G43010.1 29.379 177 105 6 343 512 159 322 2.13e-13 72.8
Msa0553930 AT5G53170.1 27.711 249 145 9 347 588 373 593 2.93e-13 73.6
Msa0553930 AT1G79560.2 26.768 198 125 6 332 512 485 679 5.86e-13 72.8
Msa0553930 AT1G79560.1 26.768 198 125 6 332 512 485 679 5.90e-13 72.8
Msa0553930 AT1G79560.3 26.768 198 125 6 332 512 485 679 5.94e-13 72.8
Msa0553930 AT1G80350.1 27.358 212 117 7 368 568 271 456 1.66e-12 70.5
Msa0553930 AT4G24860.1 27.619 210 117 6 368 570 854 1035 4.79e-12 69.7
Msa0553930 AT4G24860.3 27.619 210 117 6 368 570 852 1033 5.04e-12 69.7
Msa0553930 AT4G24860.2 27.619 210 117 6 368 570 850 1031 5.40e-12 69.7
Msa0553930 AT4G24860.4 27.619 210 117 6 368 570 827 1008 5.45e-12 69.7
Msa0553930 AT3G27120.1 26.761 213 122 6 363 568 430 615 5.20e-11 66.2

Find 164 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGATTGTTGTTTCGGAATT+TGG 0.127468 4_1:+51214487 None:intergenic
GCCATTGTCTTTCCTGTTCC+TGG 0.175730 4_1:+51211727 None:intergenic
GGGTGGCGGCGGAGGGGTTT+CGG 0.183344 4_1:+51214508 None:intergenic
CGGAATTTGGGTGGCGGCGG+AGG 0.187431 4_1:+51214500 None:intergenic
TCAAAAGTCAGAAATGATTT+TGG 0.201736 4_1:-51211862 Msa0553930:CDS
TGATAATTGAAGGAAGATTT+TGG 0.214883 4_1:-51210073 Msa0553930:three_prime_UTR
GGTTTCCTTTCAATAGTCTT+TGG 0.216175 4_1:+51210329 None:intergenic
GGGATATGTTGATAGAATAT+TGG 0.277434 4_1:-51211992 Msa0553930:CDS
GGTGGCGGCGGAGGGGTTTC+GGG 0.277440 4_1:+51214509 None:intergenic
GCTCCTTTGACGAGAGGTTC+TGG 0.291696 4_1:+51214440 None:intergenic
CCTGATCTTAATAACAGAAT+TGG 0.296514 4_1:-51211823 Msa0553930:CDS
GGGAAGGTGCACGGGTTATA+TGG 0.307689 4_1:-51212014 Msa0553930:CDS
CTATATGTAACAGCTGATTA+TGG 0.308505 4_1:-51209985 Msa0553930:three_prime_UTR
ATTGGGCCAAGAAGTCAAAA+AGG 0.311892 4_1:-51210840 Msa0553930:CDS
GGATTGTTGTTTCGGAATTT+GGG 0.314786 4_1:+51214488 None:intergenic
AAAGAAGCTTGGACAGCTTC+AGG 0.314911 4_1:-51213175 Msa0553930:CDS
ATGGTCAAAAGTAGCATTTA+TGG 0.315460 4_1:+51212733 None:intergenic
AGCGATATCGTGTAGGGTTT+TGG 0.320059 4_1:+51214418 None:intergenic
ATCCCAGTTGGCTAAGTATA+AGG 0.330968 4_1:-51213142 Msa0553930:CDS
GGAATTTGGGTGGCGGCGGA+GGG 0.344720 4_1:+51214501 None:intergenic
CCACAAAAGATAGAGATAAA+AGG 0.345324 4_1:-51210307 Msa0553930:CDS
AGATACACCAATTGTTTGAT+TGG 0.348674 4_1:-51210858 Msa0553930:CDS
TAGTTCTGGGATTGTTGTTT+CGG 0.349197 4_1:+51214480 None:intergenic
TTTATATCGCTCGTCTTCTC+CGG 0.350777 4_1:+51210414 None:intergenic
TAAACTTCTTAAGCTCTATC+TGG 0.354967 4_1:-51210395 Msa0553930:CDS
TCCGCCATCGCCGCCGCATC+TGG 0.356150 4_1:-51214581 Msa0553930:CDS
CATCCTTATACTTAGCCAAC+TGG 0.376261 4_1:+51213139 None:intergenic
TGCAATAGAAGAACAGATTC+AGG 0.376449 4_1:-51212927 Msa0553930:CDS
GCATCAACAGAGAAGAAAAT+TGG 0.380423 4_1:-51210119 Msa0553930:CDS
TAAGGTTTAACAGCGGAGTT+GGG 0.383834 4_1:+51214664 None:intergenic
GAATTTGGGTGGCGGCGGAG+GGG 0.384973 4_1:+51214502 None:intergenic
GGATATGTTGATAGAATATT+GGG 0.390817 4_1:-51211991 Msa0553930:CDS
GGAAGGTGCACGGGTTATAT+GGG 0.394047 4_1:-51212013 Msa0553930:CDS
CTCCGGGTAAGGGAAATTCT+AGG 0.395996 4_1:+51210431 None:intergenic
CTTGTCTTGATCTGTTAGAA+TGG 0.400483 4_1:+51212317 None:intergenic
TCACTTCGCGGAACAAGCTT+TGG 0.401628 4_1:+51210161 None:intergenic
GATACACCAATTGTTTGATT+GGG 0.403800 4_1:-51210857 Msa0553930:CDS
AGCAGACGCACTTGTATTAA+CGG 0.410849 4_1:-51212825 Msa0553930:CDS
TCTCCCTTGACCACTAATCT+TGG 0.412868 4_1:-51209937 Msa0553930:three_prime_UTR
CTAAGGTTTAACAGCGGAGT+TGG 0.417334 4_1:+51214663 None:intergenic
AAGGGCAAGGACTATGTCTT+TGG 0.419229 4_1:+51210510 None:intergenic
TCGCTCGTCTTCTCCGGGTA+AGG 0.420179 4_1:+51210420 None:intergenic
AAACCCAGCAGAGGTAGTTC+TGG 0.436154 4_1:+51214466 None:intergenic
AGGATGAGTTGACGAGGAAG+AGG 0.436565 4_1:-51213122 Msa0553930:CDS
GAGATCACCGGGACGGTTTG+TGG 0.443356 4_1:+51210486 None:intergenic
TCTTGGCCCAATCAAACAAT+TGG 0.447585 4_1:+51210851 None:intergenic
CCAATTCTGTTATTAAGATC+AGG 0.447988 4_1:+51211823 None:intergenic
AATCCCAGAACTACCTCTGC+TGG 0.452685 4_1:-51214470 Msa0553930:CDS
AGCTAGTGCATGATAATTGA+AGG 0.453379 4_1:-51210083 Msa0553930:exon
GTTTCGGGATCGTCGGAAGG+AGG 0.456998 4_1:+51214524 None:intergenic
TGTTGCGCCACTTGGGTCGC+AGG 0.457971 4_1:-51210890 Msa0553930:CDS
CTGATCTTAATAACAGAATT+GGG 0.458795 4_1:-51211822 Msa0553930:CDS
ACCGGGACGGTTTGTGGCAA+GGG 0.461614 4_1:+51210492 None:intergenic
AGTGTCCAAGCTGCTGTGTA+TGG 0.463701 4_1:-51210205 Msa0553930:CDS
CTAGATCAGTACGTCGGGAC+AGG 0.464042 4_1:+51211893 None:intergenic
TCGGGATCGTCGGAAGGAGG+TGG 0.469324 4_1:+51214527 None:intergenic
AATGACTGATGATATCATAA+AGG 0.473441 4_1:-51210284 Msa0553930:CDS
GGAGTTACTGCTCTGGCAGC+AGG 0.476150 4_1:-51212276 Msa0553930:CDS
GAAAAGAAACCTACGGCGTA+TGG 0.482986 4_1:+51214602 None:intergenic
TTTCGGAATTTGGGTGGCGG+CGG 0.483158 4_1:+51214497 None:intergenic
CGCTCGTCTTCTCCGGGTAA+GGG 0.484758 4_1:+51210421 None:intergenic
CGGAAACTGAGGATGTTAGA+AGG 0.486905 4_1:-51212805 Msa0553930:CDS
TTAGATTATGCATTGATGAC+CGG 0.491419 4_1:-51210919 Msa0553930:CDS
AACCCAGCAGAGGTAGTTCT+GGG 0.492236 4_1:+51214467 None:intergenic
CTTTATAATCAATCACTTCG+CGG 0.492710 4_1:+51210149 None:intergenic
AGTTGGTGGAGTTACTGCTC+TGG 0.493332 4_1:-51212283 Msa0553930:CDS
GAAACCAGATGCGGCGGCGA+TGG 0.494615 4_1:+51214577 None:intergenic
CAACTATAGTCCAAGATTAG+TGG 0.497040 4_1:+51209927 None:intergenic
TTGTCTTTCCTGTTCCTGGA+GGG 0.498931 4_1:+51211731 None:intergenic
ACCAGATGCGGCGGCGATGG+CGG 0.499143 4_1:+51214580 None:intergenic
GAGACAAAGGATTACATATG+AGG 0.499675 4_1:-51213202 Msa0553930:CDS
GACAAGTACATTGCCCAAGC+TGG 0.499789 4_1:-51210373 Msa0553930:CDS
ATGTTTGTAGGGAAGGTGCA+CGG 0.502847 4_1:-51212023 Msa0553930:intron
GACAAGTTAGTTGTAGCAGT+TGG 0.503199 4_1:-51212300 Msa0553930:CDS
ATAGCGAAATACCCCTGGTC+TGG 0.503761 4_1:-51211940 Msa0553930:CDS
GACGGTTTGTGGCAAGGGCA+AGG 0.504738 4_1:+51210497 None:intergenic
AAGTTAGTTGTAGCAGTTGG+TGG 0.505609 4_1:-51212297 Msa0553930:CDS
TAATAACAGAATTGGGCAGC+TGG 0.508062 4_1:-51211815 Msa0553930:CDS
TTATATCGCTCGTCTTCTCC+GGG 0.510092 4_1:+51210415 None:intergenic
GTCCTAGAATTTCCCTTACC+CGG 0.512713 4_1:-51210433 Msa0553930:CDS
GGGGAGATGTTGCGCCACTT+GGG 0.513996 4_1:-51210897 Msa0553930:CDS
CACCGGGACGGTTTGTGGCA+AGG 0.516618 4_1:+51210491 None:intergenic
TAGATTATGCATTGATGACC+GGG 0.517318 4_1:-51210918 Msa0553930:CDS
CAAGCTGGATCAAGAAAACC+TGG 0.522707 4_1:-51210358 Msa0553930:CDS
GCCCTTGCCACAAACCGTCC+CGG 0.523140 4_1:-51210493 Msa0553930:CDS
CGGAGGGGTTTCGGGATCGT+CGG 0.523653 4_1:+51214517 None:intergenic
AGATTCTAGATCAGTACGTC+GGG 0.529751 4_1:+51211888 None:intergenic
TGTTTGTAGGGAAGGTGCAC+GGG 0.530680 4_1:-51212022 Msa0553930:intron
TAGTTGCTGTACTGTGATCA+AGG 0.530961 4_1:-51209910 Msa0553930:three_prime_UTR
CAATCAAACTGCAGCAAGCT+CGG 0.531207 4_1:-51212952 Msa0553930:CDS
AGATCTACGAGCCAACTCTC+TGG 0.533016 4_1:+51211702 None:intergenic
TAGTCCAAGATTAGTGGTCA+AGG 0.534968 4_1:+51209933 None:intergenic
ACGAGACAACGTGCCAGACC+AGG 0.535901 4_1:+51211927 None:intergenic
AAAATGAACAAAAGAGAGCA+AGG 0.537617 4_1:-51213009 Msa0553930:CDS
TCGTAAGACAATCAAAGTAA+AGG 0.540584 4_1:-51212864 Msa0553930:CDS
TTGTTGTTTCGGAATTTGGG+TGG 0.542387 4_1:+51214491 None:intergenic
TGCTTCCATACACAGCAGCT+TGG 0.547388 4_1:+51210200 None:intergenic
GGGGTTTCGGGATCGTCGGA+AGG 0.548201 4_1:+51214521 None:intergenic
GAGGACTCTCGGATCAATGA+TGG 0.551316 4_1:+51211964 None:intergenic
ACAAGCTGAATTCGCTGCAA+AGG 0.552019 4_1:-51214237 Msa0553930:CDS
AGCTGCTGTGTATGGAAGCA+AGG 0.552228 4_1:-51210197 Msa0553930:CDS
TATGTCTTTGGACTGGTCAC+CGG 0.552407 4_1:+51210522 None:intergenic
GACAATGGCTGCCAGAGAGT+TGG 0.552771 4_1:-51211713 Msa0553930:CDS
ATTGTCTTTCCTGTTCCTGG+AGG 0.553900 4_1:+51211730 None:intergenic
AATAGTCTTTGGACTAAACC+AGG 0.554618 4_1:+51210340 None:intergenic
CACGGCTGAATCGAGATCAC+CGG 0.555916 4_1:+51210474 None:intergenic
ATCCTTATACTTAGCCAACT+GGG 0.561737 4_1:+51213140 None:intergenic
AATGCGCTCCTCTCTCGTAC+CGG 0.565613 4_1:-51210541 Msa0553930:CDS
ATTCTAGGACCTCATCAATA+CGG 0.565931 4_1:+51210446 None:intergenic
TTCTCTTGCAGGAGAGACAA+AGG 0.566720 4_1:-51213215 Msa0553930:intron
GTTGACGAGGAAGAGGATGC+AGG 0.568502 4_1:-51213115 Msa0553930:intron
GTCGGAAGGAGGTGGAGCGT+CGG 0.568917 4_1:+51214535 None:intergenic
AAGGTTTAACAGCGGAGTTG+GGG 0.569589 4_1:+51214665 None:intergenic
GATCCAGAACCTCTCGTCAA+AGG 0.570042 4_1:-51214443 Msa0553930:CDS
TTCCCTTCCAGAAAATCCCT+CGG 0.570535 4_1:+51210246 None:intergenic
AGACCAGGGGTATTTCGCTA+TGG 0.570591 4_1:+51211942 None:intergenic
ATTTCGCTATGGAGGACTCT+CGG 0.573238 4_1:+51211953 None:intergenic
AAGTGGCGCAACATCTCCCC+CGG 0.577586 4_1:+51210900 None:intergenic
TTGTTTCGGAATTTGGGTGG+CGG 0.579209 4_1:+51214494 None:intergenic
CAACAGAGAAGAAAATTGGC+AGG 0.581658 4_1:-51210115 Msa0553930:CDS
CCTCCATAGCGAAATACCCC+TGG 0.582328 4_1:-51211945 Msa0553930:CDS
GTGAAGTAGCGATATCGTGT+AGG 0.584677 4_1:+51214411 None:intergenic
TTAGTCCAAAGACTATTGAA+AGG 0.588142 4_1:-51210334 Msa0553930:CDS
TGAAGTAGCGATATCGTGTA+GGG 0.589235 4_1:+51214412 None:intergenic
ATCCCAGAACTACCTCTGCT+GGG 0.589791 4_1:-51214469 Msa0553930:CDS
CTCATCAATACGGTCTGACA+CGG 0.591597 4_1:+51210456 None:intergenic
TAGATCAGTACGTCGGGACA+GGG 0.593352 4_1:+51211894 None:intergenic
CCAAGAGCTAGTGAAAATGC+AGG 0.594652 4_1:-51212984 Msa0553930:CDS
GGATCAAATCAAATCCCAGT+TGG 0.605375 4_1:-51213154 Msa0553930:CDS
AGTCCAAGATTAGTGGTCAA+GGG 0.611711 4_1:+51209934 None:intergenic
CAAGGACTATGTCTTTGGAC+TGG 0.615367 4_1:+51210515 None:intergenic
GTGGAGCGTCGGAGAAAGCG+TGG 0.616705 4_1:+51214546 None:intergenic
AGGTTTAACAGCGGAGTTGG+GGG 0.623018 4_1:+51214666 None:intergenic
CGAGACAACGTGCCAGACCA+GGG 0.623935 4_1:+51211928 None:intergenic
CAGCAGGAATCTACACGACA+AGG 0.624501 4_1:-51212260 Msa0553930:intron
GTGACAGCCTGCGACCCAAG+TGG 0.626851 4_1:+51210883 None:intergenic
CCAGGGGTATTTCGCTATGG+AGG 0.627482 4_1:+51211945 None:intergenic
ACGGCTGAATCGAGATCACC+GGG 0.629107 4_1:+51210475 None:intergenic
AGATTATGCATTGATGACCG+GGG 0.631842 4_1:-51210917 Msa0553930:CDS
GAAGGTGCACGGGTTATATG+GGG 0.635807 4_1:-51212012 Msa0553930:CDS
ACTGGTCACCGGTACGAGAG+AGG 0.638503 4_1:+51210533 None:intergenic
TTCTGGATCAAACCCAGCAG+AGG 0.639979 4_1:+51214457 None:intergenic
GAAGCTGCGGCTAACACCGA+GGG 0.640001 4_1:-51210262 Msa0553930:CDS
AAGGGAAATAGCAAAACTGA+TGG 0.641440 4_1:-51210230 Msa0553930:CDS
GTGAGAGAAACCAGATGCGG+CGG 0.645481 4_1:+51214571 None:intergenic
CGTGTCAGACCGTATTGATG+AGG 0.646444 4_1:-51210455 Msa0553930:CDS
GATATCGCTACTTCACCTCA+TGG 0.648351 4_1:-51214404 Msa0553930:CDS
CAGATTCTAGATCAGTACGT+CGG 0.653579 4_1:+51211887 None:intergenic
TCAAATCAGAGCTCAACATG+AGG 0.656936 4_1:-51214201 Msa0553930:CDS
GATTATGCATTGATGACCGG+GGG 0.657162 4_1:-51210916 Msa0553930:CDS
TCCAGGAACAGGAAAGACAA+TGG 0.664109 4_1:-51211728 Msa0553930:CDS
AAACAACCTCAACTCAACAA+TGG 0.665030 4_1:-51214630 Msa0553930:exon
TGATATCATAAAGGAAGCTG+CGG 0.665829 4_1:-51210275 Msa0553930:CDS
ATGGCAAAACCATACGCCGT+AGG 0.675111 4_1:-51214611 Msa0553930:CDS
GATGGCGGAAAAGAAACCTA+CGG 0.681152 4_1:+51214595 None:intergenic
GCTGTACTGTGATCAAGGAG+AGG 0.689816 4_1:-51209905 Msa0553930:three_prime_UTR
ACTTGTATTAACGGAAACTG+AGG 0.697805 4_1:-51212816 Msa0553930:CDS
CTGAATCGAGATCACCGGGA+CGG 0.707761 4_1:+51210479 None:intergenic
AGTATAAGGATGAGTTGACG+AGG 0.710511 4_1:-51213128 Msa0553930:CDS
GGAAGCTGCGGCTAACACCG+AGG 0.710666 4_1:-51210263 Msa0553930:CDS
GAGACAACGTGCCAGACCAG+GGG 0.715193 4_1:+51211929 None:intergenic
GAGCGTCGGAGAAAGCGTGG+TGG 0.727613 4_1:+51214549 None:intergenic
TGGGAGCTAAGGTTTAACAG+CGG 0.740300 4_1:+51214657 None:intergenic
GTGGTGAGAGAAACCAGATG+CGG 0.753799 4_1:+51214568 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTGTTGA+AGG - chr4_1:51210208-51210227 Msa0553930:CDS 10.0%
!! AATAAAAAATACATAACATA+TGG + chr4_1:51210353-51210372 None:intergenic 10.0%
!!! AAAGTTTAGTTTTTTAATTT+TGG - chr4_1:51211424-51211443 Msa0553930:intron 10.0%
!!! TTGAATTACTTTTTTATTTA+GGG - chr4_1:51213226-51213245 Msa0553930:intron 10.0%
!! AATAAAAAAGAAAAGCAAAA+GGG + chr4_1:51210172-51210191 None:intergenic 15.0%
!! AAATAAAAAAGAAAAGCAAA+AGG + chr4_1:51210173-51210192 None:intergenic 15.0%
!!! TCTTAATTTTAGTATGTTTT+TGG - chr4_1:51210384-51210403 Msa0553930:CDS 15.0%
!!! TATATTTCTAGAATCAATTT+TGG - chr4_1:51210706-51210725 Msa0553930:intron 15.0%
!!! ATTCAATTTTTTAACTTTGA+AGG + chr4_1:51211193-51211212 None:intergenic 15.0%
!! ATTCTTGTATTATTATTGTA+AGG - chr4_1:51211467-51211486 Msa0553930:intron 15.0%
!!! TTTTAAAAAGAAATTTCATG+TGG - chr4_1:51211933-51211952 Msa0553930:CDS 15.0%
!!! GTTGAATTACTTTTTTATTT+AGG - chr4_1:51213225-51213244 Msa0553930:intron 15.0%
!!! TGAATTACTTTTTTATTTAG+GGG - chr4_1:51213227-51213246 Msa0553930:intron 15.0%
!!! ACATAACATATGGTTTTAAT+AGG + chr4_1:51210343-51210362 None:intergenic 20.0%
!! ATAAATTTGTGTGTAAACAT+CGG - chr4_1:51210583-51210602 Msa0553930:CDS 20.0%
!!! TTATTGATTTTCACATGTTT+GGG + chr4_1:51210905-51210924 None:intergenic 20.0%
!!! ATTATTGATTTTCACATGTT+TGG + chr4_1:51210906-51210925 None:intergenic 20.0%
!! GAAAATCAATAATGTATGTT+CGG - chr4_1:51210913-51210932 Msa0553930:CDS 20.0%
!! AAAATCAATAATGTATGTTC+GGG - chr4_1:51210914-51210933 Msa0553930:CDS 20.0%
!! AAAACTTATGAAAAGGAAAA+TGG + chr4_1:51213089-51213108 None:intergenic 20.0%
!!! TCTAAAATAATCTGTTTTCA+AGG - chr4_1:51213120-51213139 Msa0553930:CDS 20.0%
!!! ATTTTAAGTTCTTGATTCTT+TGG - chr4_1:51213183-51213202 Msa0553930:CDS 20.0%
!! AAAGATGGTACTTATAATAA+GGG + chr4_1:51213390-51213409 None:intergenic 20.0%
!! TAAAGATGGTACTTATAATA+AGG + chr4_1:51213391-51213410 None:intergenic 20.0%
!! AAATAATTAAAGGAGAAGTT+TGG + chr4_1:51213451-51213470 None:intergenic 20.0%
!! AAACTTCTCCTTTAATTATT+TGG - chr4_1:51213450-51213469 Msa0553930:intron 20.0%
!!! TATTTTGTCTCATTTTTGTT+TGG - chr4_1:51213546-51213565 Msa0553930:intron 20.0%
!!! ATTACTTTTATTGATGATGT+TGG - chr4_1:51214669-51214688 Msa0553930:five_prime_UTR 20.0%
!!! TTACTTTTATTGATGATGTT+GGG - chr4_1:51214670-51214689 Msa0553930:five_prime_UTR 20.0%
! TGAGAATATTAAAAAGAGAG+AGG - chr4_1:51210235-51210254 Msa0553930:CDS 25.0%
! GTTAAGAATAAGTGTATGTT+TGG - chr4_1:51210453-51210472 Msa0553930:CDS 25.0%
!!! GTTTTTGAGTGAATTGATTA+TGG - chr4_1:51210495-51210514 Msa0553930:CDS 25.0%
! TTAAGTAGAATCAATTCTTG+AGG - chr4_1:51210636-51210655 Msa0553930:intron 25.0%
!! TTGAGTGTAAAAATCACTTT+TGG - chr4_1:51210807-51210826 Msa0553930:CDS 25.0%
! AAGTCAAAATCAATTCCAAT+TGG - chr4_1:51210874-51210893 Msa0553930:CDS 25.0%
! AAATCATATCATTACCTTCA+AGG - chr4_1:51211069-51211088 Msa0553930:intron 25.0%
! TAAGTCAGAAACAGAAAAAT+GGG - chr4_1:51211740-51211759 Msa0553930:CDS 25.0%
! TTGACAATCTTAAAAGACAA+CGG - chr4_1:51211841-51211860 Msa0553930:CDS 25.0%
! ATTAATGAGTAAACAACATC+AGG + chr4_1:51211997-51212016 None:intergenic 25.0%
! ATTAGTAATGTAGTACTTTG+CGG - chr4_1:51212015-51212034 Msa0553930:CDS 25.0%
!! AGACTGAATTTTCAAACATA+GGG + chr4_1:51212142-51212161 None:intergenic 25.0%
!! TAGACTGAATTTTCAAACAT+AGG + chr4_1:51212143-51212162 None:intergenic 25.0%
! AATATCGGTAAAAAAGAACA+AGG + chr4_1:51212352-51212371 None:intergenic 25.0%
!! GGATATGTTGATAGAATATT+GGG - chr4_1:51212511-51212530 Msa0553930:intron 25.0%
!! TCAAAAGTCAGAAATGATTT+TGG - chr4_1:51212640-51212659 Msa0553930:intron 25.0%
! CTGATCTTAATAACAGAATT+GGG - chr4_1:51212680-51212699 Msa0553930:intron 25.0%
!! TAAAAAAGCATGTTTCTGAA+TGG + chr4_1:51212748-51212767 None:intergenic 25.0%
!!! TTCAGAAACATGCTTTTTTA+TGG - chr4_1:51212748-51212767 Msa0553930:CDS 25.0%
!!! GATAGTATTTTAAACTTCTC+TGG + chr4_1:51212907-51212926 None:intergenic 25.0%
!!! TTTAAACTTCTCTAGAACAT+AGG + chr4_1:51212943-51212962 None:intergenic 25.0%
! TTTAAACTTCACTAGAACAT+AGG + chr4_1:51212987-51213006 None:intergenic 25.0%
!! GTTTAAATTTTATGCTGTGA+TGG - chr4_1:51213000-51213019 Msa0553930:CDS 25.0%
! TCAGTTGAAAACTTATGAAA+AGG + chr4_1:51213096-51213115 None:intergenic 25.0%
! AAGATGGTACTTATAATAAG+GGG + chr4_1:51213389-51213408 None:intergenic 25.0%
! TATGCATGAAATTGTAAAGA+TGG + chr4_1:51213405-51213424 None:intergenic 25.0%
! GCTTCTTTCCAAATAATTAA+AGG + chr4_1:51213461-51213480 None:intergenic 25.0%
! TGGAAAGAAGCTTATATTTA+TGG - chr4_1:51213470-51213489 Msa0553930:intron 25.0%
!! CTTTTATCTCTATCTTTTGT+GGG + chr4_1:51214197-51214216 None:intergenic 25.0%
! AATGACTGATGATATCATAA+AGG - chr4_1:51214218-51214237 Msa0553930:CDS 25.0%
!! TGATAATTGAAGGAAGATTT+TGG - chr4_1:51214429-51214448 Msa0553930:CDS 25.0%
! AATTCAACATTTTTGCCATG+AGG + chr4_1:51210116-51210135 None:intergenic 30.0%
TGAGGCAAATTCAATTATGT+TGG - chr4_1:51210654-51210673 Msa0553930:intron 30.0%
CATTCAACTTAGTGTATGTT+TGG + chr4_1:51210749-51210768 None:intergenic 30.0%
! CATACACTAAGTTGAATGTT+TGG - chr4_1:51210751-51210770 Msa0553930:intron 30.0%
TATGAGGAAAAAAAGAAGCT+TGG - chr4_1:51211316-51211335 Msa0553930:intron 30.0%
AAAATGAACAAAAGAGAGCA+AGG - chr4_1:51211493-51211512 Msa0553930:intron 30.0%
TCGTAAGACAATCAAAGTAA+AGG - chr4_1:51211638-51211657 Msa0553930:intron 30.0%
!!! TTTTTCTGTTTCTGACTTAG+CGG + chr4_1:51211739-51211758 None:intergenic 30.0%
CTAAGTCAGAAACAGAAAAA+TGG - chr4_1:51211739-51211758 Msa0553930:CDS 30.0%
ATGGTCAAAAGTAGCATTTA+TGG + chr4_1:51211772-51211791 None:intergenic 30.0%
!!! AATGCTACTTTTGACCATAT+TGG - chr4_1:51211774-51211793 Msa0553930:CDS 30.0%
GTAAAAATGTACCTCCAATA+TGG + chr4_1:51211791-51211810 None:intergenic 30.0%
TTAGTAATGTAGTACTTTGC+GGG - chr4_1:51212016-51212035 Msa0553930:CDS 30.0%
TAGTCGAGTAAAAACACTAA+TGG + chr4_1:51212092-51212111 None:intergenic 30.0%
!! ATTAGTGTTTTTACTCGACT+AGG - chr4_1:51212091-51212110 Msa0553930:intron 30.0%
! AAATTCAGTCTATCTTTTGC+AGG - chr4_1:51212151-51212170 Msa0553930:intron 30.0%
! AATTCAGTCTATCTTTTGCA+GGG - chr4_1:51212152-51212171 Msa0553930:intron 30.0%
! GAGCATTTGAAGTTGAATAT+CGG + chr4_1:51212367-51212386 None:intergenic 30.0%
! GGGATATGTTGATAGAATAT+TGG - chr4_1:51212510-51212529 Msa0553930:intron 30.0%
CCAATTCTGTTATTAAGATC+AGG + chr4_1:51212682-51212701 None:intergenic 30.0%
CCTGATCTTAATAACAGAAT+TGG - chr4_1:51212679-51212698 Msa0553930:intron 30.0%
AGTATGAAACACTAGAAAAC+TGG + chr4_1:51212859-51212878 None:intergenic 30.0%
TGTTTCATACTATCTACCTT+TGG - chr4_1:51212868-51212887 Msa0553930:CDS 30.0%
TGGAACATAGAAAAAACCAA+AGG + chr4_1:51212887-51212906 None:intergenic 30.0%
CTAGAACATAGGAAAAATCA+AGG + chr4_1:51212932-51212951 None:intergenic 30.0%
! GTTTAAAATACTATCTCCCT+TGG - chr4_1:51212956-51212975 Msa0553930:CDS 30.0%
TAGAACATAGGAAAAACCAA+GGG + chr4_1:51212975-51212994 None:intergenic 30.0%
TTGAGTTTACAAACACACTA+GGG + chr4_1:51213164-51213183 None:intergenic 30.0%
ATTGAGTTTACAAACACACT+AGG + chr4_1:51213165-51213184 None:intergenic 30.0%
GCACAAAAAAACAACTGTAA+GGG + chr4_1:51213319-51213338 None:intergenic 30.0%
AGCACAAAAAAACAACTGTA+AGG + chr4_1:51213320-51213339 None:intergenic 30.0%
CTTCTATTTAGAGACAAAAG+TGG - chr4_1:51213517-51213536 Msa0553930:intron 30.0%
! TTAGATTATGCATTGATGAC+CGG - chr4_1:51213583-51213602 Msa0553930:intron 30.0%
AGATACACCAATTGTTTGAT+TGG - chr4_1:51213644-51213663 Msa0553930:intron 30.0%
GATACACCAATTGTTTGATT+GGG - chr4_1:51213645-51213664 Msa0553930:intron 30.0%
TAAACTTCTTAAGCTCTATC+TGG - chr4_1:51214107-51214126 Msa0553930:intron 30.0%
TTAGTCCAAAGACTATTGAA+AGG - chr4_1:51214168-51214187 Msa0553930:intron 30.0%
! CCTTTTATCTCTATCTTTTG+TGG + chr4_1:51214198-51214217 None:intergenic 30.0%
CCACAAAAGATAGAGATAAA+AGG - chr4_1:51214195-51214214 Msa0553930:intron 30.0%
CTTTATAATCAATCACTTCG+CGG + chr4_1:51214356-51214375 None:intergenic 30.0%
CTATATGTAACAGCTGATTA+TGG - chr4_1:51214517-51214536 Msa0553930:CDS 30.0%
!!! GAGTTGAGGTTGTTTTTGTT+GGG + chr4_1:51209867-51209886 None:intergenic 35.0%
!!! TGAGTTGAGGTTGTTTTTGT+TGG + chr4_1:51209868-51209887 None:intergenic 35.0%
AAACAACCTCAACTCAACAA+TGG - chr4_1:51209872-51209891 Msa0553930:three_prime_UTR 35.0%
!! GGATTGTTGTTTCGGAATTT+GGG + chr4_1:51210017-51210036 None:intergenic 35.0%
!! TAGTTCTGGGATTGTTGTTT+CGG + chr4_1:51210025-51210044 None:intergenic 35.0%
AATGGAAGGAAGAATGAGAA+GGG + chr4_1:51210145-51210164 None:intergenic 35.0%
! GAAAAGCAAAAGGGTATGAA+TGG + chr4_1:51210163-51210182 None:intergenic 35.0%
GGCAAATTCAATTATGTTGG+AGG - chr4_1:51210657-51210676 Msa0553930:intron 35.0%
! ATGTTTGGTTTCACTTCTAG+AGG + chr4_1:51210734-51210753 None:intergenic 35.0%
TCATGCAGCTAGAACTTATA+AGG + chr4_1:51211134-51211153 None:intergenic 35.0%
AGAGAAAACAGTTGAAATGC+TGG + chr4_1:51211273-51211292 None:intergenic 35.0%
! TTTCAACTGTTTTCTCTTGC+AGG - chr4_1:51211276-51211295 Msa0553930:intron 35.0%
GAGACAAAGGATTACATATG+AGG - chr4_1:51211300-51211319 Msa0553930:intron 35.0%
ATCCTTATACTTAGCCAACT+GGG + chr4_1:51211365-51211384 None:intergenic 35.0%
TGCAATAGAAGAACAGATTC+AGG - chr4_1:51211575-51211594 Msa0553930:intron 35.0%
ACTTGTATTAACGGAAACTG+AGG - chr4_1:51211686-51211705 Msa0553930:intron 35.0%
! ATTCAGTCTATCTTTTGCAG+GGG - chr4_1:51212153-51212172 Msa0553930:intron 35.0%
CTTGTCTTGATCTGTTAGAA+TGG + chr4_1:51212188-51212207 None:intergenic 35.0%
CTAATGAGCTACTGAAAATG+AGG - chr4_1:51212286-51212305 Msa0553930:CDS 35.0%
! TGCGTAGTTTGTATTCACAT+TGG - chr4_1:51212451-51212470 Msa0553930:intron 35.0%
ACATTGGACTTGATGTTTGT+AGG - chr4_1:51212467-51212486 Msa0553930:intron 35.0%
CATTGGACTTGATGTTTGTA+GGG - chr4_1:51212468-51212487 Msa0553930:intron 35.0%
CTAGAACATAGGAAAAACCA+AGG + chr4_1:51212976-51212995 None:intergenic 35.0%
GATGTTAAGTATCATGCTCT+GGG - chr4_1:51213260-51213279 Msa0553930:intron 35.0%
!! TTTTTGTTTGGATACACTGC+AGG - chr4_1:51213558-51213577 Msa0553930:intron 35.0%
!! TTTTGTTTGGATACACTGCA+GGG - chr4_1:51213559-51213578 Msa0553930:intron 35.0%
! TAGATTATGCATTGATGACC+GGG - chr4_1:51213584-51213603 Msa0553930:intron 35.0%
!!! TAAACCCCTTTTTGACTTCT+TGG + chr4_1:51213671-51213690 None:intergenic 35.0%
!!! AACCTTTTTTTCCTCTTTGG+AGG + chr4_1:51213807-51213826 None:intergenic 35.0%
!!! TGCAACCTTTTTTTCCTCTT+TGG + chr4_1:51213810-51213829 None:intergenic 35.0%
! TTGCATTGGGTGAATTTTAC+AGG - chr4_1:51213896-51213915 Msa0553930:intron 35.0%
!! ATTCTAGGACCTCATCAATA+CGG + chr4_1:51214059-51214078 None:intergenic 35.0%
AATAGTCTTTGGACTAAACC+AGG + chr4_1:51214165-51214184 None:intergenic 35.0%
GGTTTCCTTTCAATAGTCTT+TGG + chr4_1:51214176-51214195 None:intergenic 35.0%
TGATATCATAAAGGAAGCTG+CGG - chr4_1:51214227-51214246 Msa0553930:CDS 35.0%
AAGGGAAATAGCAAAACTGA+TGG - chr4_1:51214272-51214291 Msa0553930:CDS 35.0%
GCATCAACAGAGAAGAAAAT+TGG - chr4_1:51214383-51214402 Msa0553930:intron 35.0%
AGCTAGTGCATGATAATTGA+AGG - chr4_1:51214419-51214438 Msa0553930:CDS 35.0%
CAACTATAGTCCAAGATTAG+TGG + chr4_1:51214578-51214597 None:intergenic 35.0%
TAAGGTTTAACAGCGGAGTT+GGG + chr4_1:51209841-51209860 None:intergenic 40.0%
!!! GTTGTTTTTGTTGGGAGCTA+AGG + chr4_1:51209859-51209878 None:intergenic 40.0%
!! GTTTTGCCATTGTTGAGTTG+AGG + chr4_1:51209881-51209900 None:intergenic 40.0%
!! TTGTTGTTTCGGAATTTGGG+TGG + chr4_1:51210014-51210033 None:intergenic 40.0%
!! GGGATTGTTGTTTCGGAATT+TGG + chr4_1:51210018-51210037 None:intergenic 40.0%
TGAAGTAGCGATATCGTGTA+GGG + chr4_1:51210093-51210112 None:intergenic 40.0%
GAATGGAAGGAAGAATGAGA+AGG + chr4_1:51210146-51210165 None:intergenic 40.0%
! AGCAAAAGGGTATGAATGGA+AGG + chr4_1:51210159-51210178 None:intergenic 40.0%
TCAAATCAGAGCTCAACATG+AGG - chr4_1:51210301-51210320 Msa0553930:CDS 40.0%
! GTGTGTTTGGTTTCACAACA+GGG + chr4_1:51210955-51210974 None:intergenic 40.0%
! TGTGTGTTTGGTTTCACAAC+AGG + chr4_1:51210956-51210975 None:intergenic 40.0%
TGTGAAACCAAACACACAGT+TGG - chr4_1:51210958-51210977 Msa0553930:intron 40.0%
ACAGTTTCCAACTGTGTGTT+TGG + chr4_1:51210968-51210987 None:intergenic 40.0%
AGTGTGCACGATTAGGAAAA+CGG + chr4_1:51210992-51211011 None:intergenic 40.0%
TAATCGTGCACACTTTGCAT+GGG - chr4_1:51210998-51211017 Msa0553930:intron 40.0%
AGCTAGAACTTATAAGGCGA+TGG + chr4_1:51211128-51211147 None:intergenic 40.0%
GGATCAAATCAAATCCCAGT+TGG - chr4_1:51211348-51211367 Msa0553930:intron 40.0%
ATCCCAGTTGGCTAAGTATA+AGG - chr4_1:51211360-51211379 Msa0553930:intron 40.0%
CATCCTTATACTTAGCCAAC+TGG + chr4_1:51211366-51211385 None:intergenic 40.0%
! AGTATAAGGATGAGTTGACG+AGG - chr4_1:51211374-51211393 Msa0553930:intron 40.0%
AGCAGACGCACTTGTATTAA+CGG - chr4_1:51211677-51211696 Msa0553930:intron 40.0%
!!! GCTACTTTTGACCATATTGG+AGG - chr4_1:51211777-51211796 Msa0553930:CDS 40.0%
TTCAAACATAGGGATTCGTG+TGG + chr4_1:51212132-51212151 None:intergenic 40.0%
! TTCAGTCTATCTTTTGCAGG+GGG - chr4_1:51212154-51212173 Msa0553930:intron 40.0%
GACAAGTTAGTTGTAGCAGT+TGG - chr4_1:51212202-51212221 Msa0553930:intron 40.0%
AAGTTAGTTGTAGCAGTTGG+TGG - chr4_1:51212205-51212224 Msa0553930:intron 40.0%
TGAGCTACTGAAAATGAGGA+AGG - chr4_1:51212290-51212309 Msa0553930:CDS 40.0%
CTACTGAAAATGAGGAAGGT+GGG - chr4_1:51212294-51212313 Msa0553930:CDS 40.0%
CGGTAAAAAAGAACAAGGCT+TGG + chr4_1:51212347-51212366 None:intergenic 40.0%
AGATTCTAGATCAGTACGTC+GGG + chr4_1:51212617-51212636 None:intergenic 40.0%
CAGATTCTAGATCAGTACGT+CGG + chr4_1:51212618-51212637 None:intergenic 40.0%
TAATAACAGAATTGGGCAGC+TGG - chr4_1:51212687-51212706 Msa0553930:intron 40.0%
CGATGTTAAGTATCATGCTC+TGG - chr4_1:51213259-51213278 Msa0553930:intron 40.0%
GGCAGAGGTAGTATATCTAA+AGG + chr4_1:51213368-51213387 None:intergenic 40.0%
GTACTTATAATAAGGGGCAG+AGG + chr4_1:51213383-51213402 None:intergenic 40.0%
! AGATTATGCATTGATGACCG+GGG - chr4_1:51213585-51213604 Msa0553930:intron 40.0%
TCTTGGCCCAATCAAACAAT+TGG + chr4_1:51213654-51213673 None:intergenic 40.0%
ATTGGGCCAAGAAGTCAAAA+AGG - chr4_1:51213662-51213681 Msa0553930:intron 40.0%
TTGGGCCAAGAAGTCAAAAA+GGG - chr4_1:51213663-51213682 Msa0553930:intron 40.0%
TGCCTCCAAAGAGGAAAAAA+AGG - chr4_1:51213802-51213821 Msa0553930:intron 40.0%
TCAATTCGCTTGGTCAACTT+TGG + chr4_1:51213876-51213895 None:intergenic 40.0%
ACCAAGCGAATTGATTGCAT+TGG - chr4_1:51213882-51213901 Msa0553930:intron 40.0%
CCAAGCGAATTGATTGCATT+GGG - chr4_1:51213883-51213902 Msa0553930:intron 40.0%
! CATTGGGTGAATTTTACAGG+CGG - chr4_1:51213899-51213918 Msa0553930:intron 40.0%
TTTATATCGCTCGTCTTCTC+CGG + chr4_1:51214091-51214110 None:intergenic 40.0%
! AGGTTTTCTTGATCCAGCTT+GGG + chr4_1:51214145-51214164 None:intergenic 40.0%
CAACAGAGAAGAAAATTGGC+AGG - chr4_1:51214387-51214406 Msa0553930:intron 40.0%
AGTCCAAGATTAGTGGTCAA+GGG + chr4_1:51214571-51214590 None:intergenic 40.0%
TAGTCCAAGATTAGTGGTCA+AGG + chr4_1:51214572-51214591 None:intergenic 40.0%
TAGTTGCTGTACTGTGATCA+AGG - chr4_1:51214592-51214611 Msa0553930:CDS 40.0%
AAGGTTTAACAGCGGAGTTG+GGG + chr4_1:51209840-51209859 None:intergenic 45.0%
CTAAGGTTTAACAGCGGAGT+TGG + chr4_1:51209842-51209861 None:intergenic 45.0%
TGGGAGCTAAGGTTTAACAG+CGG + chr4_1:51209848-51209867 None:intergenic 45.0%
GAAAAGAAACCTACGGCGTA+TGG + chr4_1:51209903-51209922 None:intergenic 45.0%
!! GATGGCGGAAAAGAAACCTA+CGG + chr4_1:51209910-51209929 None:intergenic 45.0%
TTGTTTCGGAATTTGGGTGG+CGG + chr4_1:51210011-51210030 None:intergenic 45.0%
! AGCGATATCGTGTAGGGTTT+TGG + chr4_1:51210087-51210106 None:intergenic 45.0%
GTGAAGTAGCGATATCGTGT+AGG + chr4_1:51210094-51210113 None:intergenic 45.0%
GATATCGCTACTTCACCTCA+TGG - chr4_1:51210098-51210117 Msa0553930:CDS 45.0%
ACAAGCTGAATTCGCTGCAA+AGG - chr4_1:51210265-51210284 Msa0553930:CDS 45.0%
CATGTTTGGGTGATGCCAAT+TGG + chr4_1:51210892-51210911 None:intergenic 45.0%
CATGCAAAGTGTGCACGATT+AGG + chr4_1:51210999-51211018 None:intergenic 45.0%
CTAATCGTGCACACTTTGCA+TGG - chr4_1:51210997-51211016 Msa0553930:intron 45.0%
GAGATGACTTGAAGCCTTGA+AGG + chr4_1:51211086-51211105 None:intergenic 45.0%
TTCTCTTGCAGGAGAGACAA+AGG - chr4_1:51211287-51211306 Msa0553930:intron 45.0%
AAAGAAGCTTGGACAGCTTC+AGG - chr4_1:51211327-51211346 Msa0553930:intron 45.0%
!! CCTGCATTTTCACTAGCTCT+TGG + chr4_1:51211521-51211540 None:intergenic 45.0%
CCAAGAGCTAGTGAAAATGC+AGG - chr4_1:51211518-51211537 Msa0553930:intron 45.0%
CAATCAAACTGCAGCAAGCT+CGG - chr4_1:51211550-51211569 Msa0553930:intron 45.0%
CGGAAACTGAGGATGTTAGA+AGG - chr4_1:51211697-51211716 Msa0553930:intron 45.0%
GTCAGTATGCACTGTGCAAA+TGG - chr4_1:51211813-51211832 Msa0553930:CDS 45.0%
GCTACTGAAAATGAGGAAGG+TGG - chr4_1:51212293-51212312 Msa0553930:CDS 45.0%
GGACTTGATGTTTGTAGGGA+AGG - chr4_1:51212472-51212491 Msa0553930:intron 45.0%
! ATGTTTGTAGGGAAGGTGCA+CGG - chr4_1:51212479-51212498 Msa0553930:intron 45.0%
ATTTCGCTATGGAGGACTCT+CGG + chr4_1:51212552-51212571 None:intergenic 45.0%
!!! ATGCTTTTTTATGGCCCTCC+AGG - chr4_1:51212757-51212776 Msa0553930:CDS 45.0%
TTGTCTTTCCTGTTCCTGGA+GGG + chr4_1:51212774-51212793 None:intergenic 45.0%
ATTGTCTTTCCTGTTCCTGG+AGG + chr4_1:51212775-51212794 None:intergenic 45.0%
TCCAGGAACAGGAAAGACAA+TGG - chr4_1:51212774-51212793 Msa0553930:CDS 45.0%
! GATTATGCATTGATGACCGG+GGG - chr4_1:51213586-51213605 Msa0553930:intron 45.0%
TGGGCCAAGAAGTCAAAAAG+GGG - chr4_1:51213664-51213683 Msa0553930:intron 45.0%
CCCAATGCAATCAATTCGCT+TGG + chr4_1:51213886-51213905 None:intergenic 45.0%
!! TATGTCTTTGGACTGGTCAC+CGG + chr4_1:51213983-51214002 None:intergenic 45.0%
CAAGGACTATGTCTTTGGAC+TGG + chr4_1:51213990-51214009 None:intergenic 45.0%
AAGGGCAAGGACTATGTCTT+TGG + chr4_1:51213995-51214014 None:intergenic 45.0%
CTCATCAATACGGTCTGACA+CGG + chr4_1:51214049-51214068 None:intergenic 45.0%
GTCCTAGAATTTCCCTTACC+CGG - chr4_1:51214069-51214088 Msa0553930:intron 45.0%
TTATATCGCTCGTCTTCTCC+GGG + chr4_1:51214090-51214109 None:intergenic 45.0%
! CAGGTTTTCTTGATCCAGCT+TGG + chr4_1:51214146-51214165 None:intergenic 45.0%
CAAGCTGGATCAAGAAAACC+TGG - chr4_1:51214144-51214163 Msa0553930:intron 45.0%
TTCCCTTCCAGAAAATCCCT+CGG + chr4_1:51214259-51214278 None:intergenic 45.0%
TCTCCCTTGACCACTAATCT+TGG - chr4_1:51214565-51214584 Msa0553930:CDS 45.0%
!!! TTTATAATAATATGATTTTT+TGG - chr4_1:51214642-51214661 Msa0553930:five_prime_UTR 5.0%
AGGTTTAACAGCGGAGTTGG+GGG + chr4_1:51209839-51209858 None:intergenic 50.0%
ATGGCAAAACCATACGCCGT+AGG - chr4_1:51209891-51209910 Msa0553930:three_prime_UTR 50.0%
GTGGTGAGAGAAACCAGATG+CGG + chr4_1:51209937-51209956 None:intergenic 50.0%
AATCCCAGAACTACCTCTGC+TGG - chr4_1:51210032-51210051 Msa0553930:three_prime_UTR 50.0%
ATCCCAGAACTACCTCTGCT+GGG - chr4_1:51210033-51210052 Msa0553930:three_prime_UTR 50.0%
AACCCAGCAGAGGTAGTTCT+GGG + chr4_1:51210038-51210057 None:intergenic 50.0%
AAACCCAGCAGAGGTAGTTC+TGG + chr4_1:51210039-51210058 None:intergenic 50.0%
TTCTGGATCAAACCCAGCAG+AGG + chr4_1:51210048-51210067 None:intergenic 50.0%
GATCCAGAACCTCTCGTCAA+AGG - chr4_1:51210059-51210078 Msa0553930:three_prime_UTR 50.0%
!!! GTTTTGGCTCCTTTGACGAG+AGG + chr4_1:51210071-51210090 None:intergenic 50.0%
! AGGATGAGTTGACGAGGAAG+AGG - chr4_1:51211380-51211399 Msa0553930:intron 50.0%
!! AGTTGGTGGAGTTACTGCTC+TGG - chr4_1:51212219-51212238 Msa0553930:intron 50.0%
CAGCAGGAATCTACACGACA+AGG - chr4_1:51212242-51212261 Msa0553930:intron 50.0%
! TGTTTGTAGGGAAGGTGCAC+GGG - chr4_1:51212480-51212499 Msa0553930:intron 50.0%
! GGAAGGTGCACGGGTTATAT+GGG - chr4_1:51212489-51212508 Msa0553930:intron 50.0%
! GAAGGTGCACGGGTTATATG+GGG - chr4_1:51212490-51212509 Msa0553930:intron 50.0%
GAGGACTCTCGGATCAATGA+TGG + chr4_1:51212541-51212560 None:intergenic 50.0%
!! AGACCAGGGGTATTTCGCTA+TGG + chr4_1:51212563-51212582 None:intergenic 50.0%
ATAGCGAAATACCCCTGGTC+TGG - chr4_1:51212562-51212581 Msa0553930:intron 50.0%
TAGATCAGTACGTCGGGACA+GGG + chr4_1:51212611-51212630 None:intergenic 50.0%
! TTTTATGGCCCTCCAGGAAC+AGG - chr4_1:51212763-51212782 Msa0553930:CDS 50.0%
GCCATTGTCTTTCCTGTTCC+TGG + chr4_1:51212778-51212797 None:intergenic 50.0%
AGATCTACGAGCCAACTCTC+TGG + chr4_1:51212803-51212822 None:intergenic 50.0%
ACTCTCTTTCTCCTTGCCTG+CGG - chr4_1:51213762-51213781 Msa0553930:intron 50.0%
GTTGCTAGATGCCTCCAAAG+AGG - chr4_1:51213793-51213812 Msa0553930:intron 50.0%
! CGTGTCAGACCGTATTGATG+AGG - chr4_1:51214047-51214066 Msa0553930:intron 50.0%
CTCCGGGTAAGGGAAATTCT+AGG + chr4_1:51214074-51214093 None:intergenic 50.0%
GACAAGTACATTGCCCAAGC+TGG - chr4_1:51214129-51214148 Msa0553930:intron 50.0%
! GCTAACACCGAGGGATTTTC+TGG - chr4_1:51214249-51214268 Msa0553930:CDS 50.0%
! ACACCGAGGGATTTTCTGGA+AGG - chr4_1:51214253-51214272 Msa0553930:CDS 50.0%
!! CACCGAGGGATTTTCTGGAA+GGG - chr4_1:51214254-51214273 Msa0553930:CDS 50.0%
AGTGTCCAAGCTGCTGTGTA+TGG - chr4_1:51214297-51214316 Msa0553930:intron 50.0%
TGCTTCCATACACAGCAGCT+TGG + chr4_1:51214305-51214324 None:intergenic 50.0%
AGCTGCTGTGTATGGAAGCA+AGG - chr4_1:51214305-51214324 Msa0553930:intron 50.0%
TCACTTCGCGGAACAAGCTT+TGG + chr4_1:51214344-51214363 None:intergenic 50.0%
GCTGTACTGTGATCAAGGAG+AGG - chr4_1:51214597-51214616 Msa0553930:CDS 50.0%
GTGAGAGAAACCAGATGCGG+CGG + chr4_1:51209934-51209953 None:intergenic 55.0%
! TTTCGGAATTTGGGTGGCGG+CGG + chr4_1:51210008-51210027 None:intergenic 55.0%
GCTCCTTTGACGAGAGGTTC+TGG + chr4_1:51210065-51210084 None:intergenic 55.0%
GTTGACGAGGAAGAGGATGC+AGG - chr4_1:51211387-51211406 Msa0553930:intron 55.0%
! GGGAAGGTGCACGGGTTATA+TGG - chr4_1:51212488-51212507 Msa0553930:intron 55.0%
!! CCAGGGGTATTTCGCTATGG+AGG + chr4_1:51212560-51212579 None:intergenic 55.0%
CCTCCATAGCGAAATACCCC+TGG - chr4_1:51212557-51212576 Msa0553930:intron 55.0%
CTAGATCAGTACGTCGGGAC+AGG + chr4_1:51212612-51212631 None:intergenic 55.0%
GACAATGGCTGCCAGAGAGT+TGG - chr4_1:51212789-51212808 Msa0553930:CDS 55.0%
AACTTGTGTTGCCGCAGGCA+AGG + chr4_1:51213776-51213795 None:intergenic 55.0%
CTAGCAACTTGTGTTGCCGC+AGG + chr4_1:51213781-51213800 None:intergenic 55.0%
AATGCGCTCCTCTCTCGTAC+CGG - chr4_1:51213961-51213980 Msa0553930:intron 55.0%
CTGAATCGAGATCACCGGGA+CGG + chr4_1:51214026-51214045 None:intergenic 55.0%
ACGGCTGAATCGAGATCACC+GGG + chr4_1:51214030-51214049 None:intergenic 55.0%
CACGGCTGAATCGAGATCAC+CGG + chr4_1:51214031-51214050 None:intergenic 55.0%
GTTTCGGGATCGTCGGAAGG+AGG + chr4_1:51209981-51210000 None:intergenic 60.0%
GGAGTTACTGCTCTGGCAGC+AGG - chr4_1:51212226-51212245 Msa0553930:intron 60.0%
GAGACAACGTGCCAGACCAG+GGG + chr4_1:51212576-51212595 None:intergenic 60.0%
CGAGACAACGTGCCAGACCA+GGG + chr4_1:51212577-51212596 None:intergenic 60.0%
ACGAGACAACGTGCCAGACC+AGG + chr4_1:51212578-51212597 None:intergenic 60.0%
AAGTGGCGCAACATCTCCCC+CGG + chr4_1:51213605-51213624 None:intergenic 60.0%
GGGGAGATGTTGCGCCACTT+GGG - chr4_1:51213605-51213624 Msa0553930:intron 60.0%
ACTGGTCACCGGTACGAGAG+AGG + chr4_1:51213972-51213991 None:intergenic 60.0%
GACGGTTTGTGGCAAGGGCA+AGG + chr4_1:51214008-51214027 None:intergenic 60.0%
ACCGGGACGGTTTGTGGCAA+GGG + chr4_1:51214013-51214032 None:intergenic 60.0%
GAGATCACCGGGACGGTTTG+TGG + chr4_1:51214019-51214038 None:intergenic 60.0%
CGCTCGTCTTCTCCGGGTAA+GGG + chr4_1:51214084-51214103 None:intergenic 60.0%
TCGCTCGTCTTCTCCGGGTA+AGG + chr4_1:51214085-51214104 None:intergenic 60.0%
GAAGCTGCGGCTAACACCGA+GGG - chr4_1:51214240-51214259 Msa0553930:CDS 60.0%
GAAACCAGATGCGGCGGCGA+TGG + chr4_1:51209928-51209947 None:intergenic 65.0%
!! GAGCGTCGGAGAAAGCGTGG+TGG + chr4_1:51209956-51209975 None:intergenic 65.0%
!! GTGGAGCGTCGGAGAAAGCG+TGG + chr4_1:51209959-51209978 None:intergenic 65.0%
GTCGGAAGGAGGTGGAGCGT+CGG + chr4_1:51209970-51209989 None:intergenic 65.0%
TCGGGATCGTCGGAAGGAGG+TGG + chr4_1:51209978-51209997 None:intergenic 65.0%
GGGGTTTCGGGATCGTCGGA+AGG + chr4_1:51209984-51210003 None:intergenic 65.0%
CGGAGGGGTTTCGGGATCGT+CGG + chr4_1:51209988-51210007 None:intergenic 65.0%
! GAATTTGGGTGGCGGCGGAG+GGG + chr4_1:51210003-51210022 None:intergenic 65.0%
! GGAATTTGGGTGGCGGCGGA+GGG + chr4_1:51210004-51210023 None:intergenic 65.0%
GGGGGAGATGTTGCGCCACT+TGG - chr4_1:51213604-51213623 Msa0553930:intron 65.0%
TGTTGCGCCACTTGGGTCGC+AGG - chr4_1:51213612-51213631 Msa0553930:intron 65.0%
GTGACAGCCTGCGACCCAAG+TGG + chr4_1:51213622-51213641 None:intergenic 65.0%
GCCCTTGCCACAAACCGTCC+CGG - chr4_1:51214009-51214028 Msa0553930:intron 65.0%
CACCGGGACGGTTTGTGGCA+AGG + chr4_1:51214014-51214033 None:intergenic 65.0%
GGAAGCTGCGGCTAACACCG+AGG - chr4_1:51214239-51214258 Msa0553930:CDS 65.0%
ACCAGATGCGGCGGCGATGG+CGG + chr4_1:51209925-51209944 None:intergenic 70.0%
! CGGAATTTGGGTGGCGGCGG+AGG + chr4_1:51210005-51210024 None:intergenic 70.0%
TCCGCCATCGCCGCCGCATC+TGG - chr4_1:51209921-51209940 Msa0553930:three_prime_UTR 75.0%
! GGTGGCGGCGGAGGGGTTTC+GGG + chr4_1:51209996-51210015 None:intergenic 75.0%
! GGGTGGCGGCGGAGGGGTTT+CGG + chr4_1:51209997-51210016 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 51209830 51214694 51209830 ID=Msa0553930;Name=Msa0553930
chr4_1 mRNA 51209830 51214694 51209830 ID=Msa0553930-mRNA-1;Parent=Msa0553930;Name=Msa0553930-mRNA-1;_AED=0.06;_eAED=0.06;_QI=61|1|1|1|1|1|8|263|613
chr4_1 exon 51209830 51210606 51209830 ID=Msa0553930-mRNA-1:exon:14634;Parent=Msa0553930-mRNA-1
chr4_1 exon 51210796 51210944 51210796 ID=Msa0553930-mRNA-1:exon:14633;Parent=Msa0553930-mRNA-1
chr4_1 exon 51211702 51212035 51211702 ID=Msa0553930-mRNA-1:exon:14632;Parent=Msa0553930-mRNA-1
chr4_1 exon 51212261 51212351 51212261 ID=Msa0553930-mRNA-1:exon:14631;Parent=Msa0553930-mRNA-1
chr4_1 exon 51212726 51213035 51212726 ID=Msa0553930-mRNA-1:exon:14630;Parent=Msa0553930-mRNA-1
chr4_1 exon 51213116 51213226 51213116 ID=Msa0553930-mRNA-1:exon:14629;Parent=Msa0553930-mRNA-1
chr4_1 exon 51214199 51214294 51214199 ID=Msa0553930-mRNA-1:exon:14628;Parent=Msa0553930-mRNA-1
chr4_1 exon 51214397 51214694 51214397 ID=Msa0553930-mRNA-1:exon:14627;Parent=Msa0553930-mRNA-1
chr4_1 five_prime_UTR 51214634 51214694 51214634 ID=Msa0553930-mRNA-1:five_prime_utr;Parent=Msa0553930-mRNA-1
chr4_1 CDS 51214397 51214633 51214397 ID=Msa0553930-mRNA-1:cds;Parent=Msa0553930-mRNA-1
chr4_1 CDS 51214199 51214294 51214199 ID=Msa0553930-mRNA-1:cds;Parent=Msa0553930-mRNA-1
chr4_1 CDS 51213116 51213226 51213116 ID=Msa0553930-mRNA-1:cds;Parent=Msa0553930-mRNA-1
chr4_1 CDS 51212726 51213035 51212726 ID=Msa0553930-mRNA-1:cds;Parent=Msa0553930-mRNA-1
chr4_1 CDS 51212261 51212351 51212261 ID=Msa0553930-mRNA-1:cds;Parent=Msa0553930-mRNA-1
chr4_1 CDS 51211702 51212035 51211702 ID=Msa0553930-mRNA-1:cds;Parent=Msa0553930-mRNA-1
chr4_1 CDS 51210796 51210944 51210796 ID=Msa0553930-mRNA-1:cds;Parent=Msa0553930-mRNA-1
chr4_1 CDS 51210093 51210606 51210093 ID=Msa0553930-mRNA-1:cds;Parent=Msa0553930-mRNA-1
chr4_1 three_prime_UTR 51209830 51210092 51209830 ID=Msa0553930-mRNA-1:three_prime_utr;Parent=Msa0553930-mRNA-1
Gene Sequence

>Msa0553930

ATGGCAAAACCATACGCCGTAGGTTTCTTTTCCGCCATCGCCGCCGCATCTGGTTTCTCTCACCACCACGCTTTCTCCGACGCTCCACCTCCTTCCGACGATCCCGAAACCCCTCCGCCGCCACCCAAATTCCGAAACAACAATCCCAGAACTACCTCTGCTGGGTTTGATCCAGAACCTCTCGTCAAAGGAGCCAAAACCCTACACGATATCGCTACTTCACCTCATGGCAAAAATGTTTTTGAGAATATTAAAAAGAGAGAGGATGAAAAACAAGCTGAATTCGCTGCAAAGGTTGTTGAGTCTAATCAAATCAGAGCTCAACATGAGGCTGAGAGACAAAGGATTACATATGAGGAAAAAAAGAAGCTTGGACAGCTTCAGGATCAAATCAAATCCCAGTTGGCTAAGTATAAGGATGAGTTGACGAGGAAGAGGATGCAGGCAGAAAATGAACAAAAGAGAGCAAGGAACCAAGAGCTAGTGAAAATGCAGGAAGATTCTTCAATCAAACTGCAGCAAGCTCGGCGTGCAATAGAAGAACAGATTCAGGCAAATCTAATGCAGACTGAAGCAGAGATCGCTGAGATTGATCGTAAGACAATCAAAGTAAAGGCTGAAGCAGAAGCAGAAGCAGACGCACTTGTATTAACGGAAACTGAGGATGTTAGAAGGCGAAAGATATATGATACCGCTAAGTCAGAAACAGAAAAATGGGTTGCTTCCATAAATGCTACTTTTGACCATATTGGAGGGGGTTTAAAAGCCATTCTAACAGATCAAGACAAGTTAGTTGTAGCAGTTGGTGGAGTTACTGCTCTGGCAGCAGGAATCTACACGACAAGGGAAGGTGCACGGGTTATATGGGGATATGTTGATAGAATATTGGGACAACCATCATTGATCCGAGAGTCCTCCATAGCGAAATACCCCTGGTCTGGCACGTTGTCTCGTATCATGAGCTCCCTGTCCCGACGTACTGATCTAGAATCTGCTTCAAAAGTCAGAAATGATTTTGGTGATGTAATTTTGCATCCTGATCTTAATAACAGAATTGGGCAGCTGGCATCTGCAACTAAGCATACAAAAGAACATCATGCACCATTCAGAAACATGCTTTTTTATGGCCCTCCAGGAACAGGAAAGACAATGGCTGCCAGAGAGTTGGCTCGTAGATCTGGATTAGATTATGCATTGATGACCGGGGGAGATGTTGCGCCACTTGGGTCGCAGGCTGTCACGAAGATACACCAATTGTTTGATTGGGCCAAGAAGTCAAAAAGGGGTTTATTGCTTTTCATTGACGAAGCTGATGCATTTCTGTGCGAGCGGAACAAGACTTACATGAGTGAAGCACAAAGAAGTGCACTAAATGCGCTCCTCTCTCGTACCGGTGACCAGTCCAAAGACATAGTCCTTGCCCTTGCCACAAACCGTCCCGGTGATCTCGATTCAGCCGTGTCAGACCGTATTGATGAGGTCCTAGAATTTCCCTTACCCGGAGAAGACGAGCGATATAAACTTCTTAAGCTCTATCTGGACAAGTACATTGCCCAAGCTGGATCAAGAAAACCTGGTTTAGTCCAAAGACTATTGAAAGGAAACCCACAAAAGATAGAGATAAAAGGAATGACTGATGATATCATAAAGGAAGCTGCGGCTAACACCGAGGGATTTTCTGGAAGGGAAATAGCAAAACTGATGGCAAGTGTCCAAGCTGCTGTGTATGGAAGCAAGGACTGTGTTCTTGACCAAAGCTTGTTCCGCGAAGTGATTGATTATAAAGTTGCTGAGCATCAACAGAGAAGAAAATTGGCAGGTGCTGATAAAGCTAGTGCATGA
Protein sequence

>Msa0553930

MAKPYAVGFFSAIAAASGFSHHHAFSDAPPPSDDPETPPPPPKFRNNNPRTTSAGFDPEPLVKGAKTLHDIATSPHGKNVFENIKKREDEKQAEFAAKVVESNQIRAQHEAERQRITYEEKKKLGQLQDQIKSQLAKYKDELTRKRMQAENEQKRARNQELVKMQEDSSIKLQQARRAIEEQIQANLMQTEAEIAEIDRKTIKVKAEAEAEADALVLTETEDVRRRKIYDTAKSETEKWVASINATFDHIGGGLKAILTDQDKLVVAVGGVTALAAGIYTTREGARVIWGYVDRILGQPSLIRESSIAKYPWSGTLSRIMSSLSRRTDLESASKVRNDFGDVILHPDLNNRIGQLASATKHTKEHHAPFRNMLFYGPPGTGKTMAARELARRSGLDYALMTGGDVAPLGSQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLSRTGDQSKDIVLALATNRPGDLDSAVSDRIDEVLEFPLPGEDERYKLLKLYLDKYIAQAGSRKPGLVQRLLKGNPQKIEIKGMTDDIIKEAAANTEGFSGREIAKLMASVQAAVYGSKDCVLDQSLFREVIDYKVAEHQQRRKLAGADKASA*