AlfalfaGEDB | Msa0180070

M. sativa cultivar zhongmu-4 / Msa0180070

KEGG: K11975
GO: GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0010941 GO:0016020 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031090 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0031966 GO:0031967 GO:0031975 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0060255 GO:0060548 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060
PFAM: PF01485.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0180070	sp\|F4ITM1\|RGSL1_ARATH	30.435	207	140	4	144	348	159	363	1.56e-28	117

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0180070	A0A072VR86	86.196	326	30	3	1	323	1	314	0.0	531

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0058440	Msa0180070	0.807927	3.979846e-50	-8.615850e-47
Msa0180070	Msa0216300	0.822869	1.880545e-53	-8.615850e-47
Msa0180070	Msa0494620	0.826481	2.649082e-54	-8.615850e-47
Msa0180070	Msa0532790	0.858646	7.143445e-63	-8.615850e-47
Msa0180070	Msa0606420	0.820883	5.419057e-53	-8.615850e-47
Msa0180070	Msa1289830	0.800768	1.234258e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0180070	MtrunA17_Chr1g0206011	88.415	164	19	0	162	325	28	191	2.00e-110	320
Msa0180070	MtrunA17_Chr1g0206031	92.121	165	10	1	93	254	1	165	8.43e-103	299
Msa0180070	MtrunA17_Chr1g0206001	82.394	142	25	0	205	346	3	144	6.43e-91	268
Msa0180070	MtrunA17_Chr2g0301841	50.952	210	101	1	127	336	79	286	5.50e-78	241
Msa0180070	MtrunA17_Chr4g0031451	53.535	198	89	2	149	345	2	197	2.61e-73	225
Msa0180070	MtrunA17_Chr4g0031441	41.158	311	121	6	14	318	9	263	6.24e-70	221
Msa0180070	MtrunA17_Chr2g0301761	51.064	188	86	4	143	328	79	262	8.56e-67	211
Msa0180070	MtrunA17_Chr2g0301741	44.828	203	110	1	128	330	53	253	4.43e-64	205
Msa0180070	MtrunA17_Chr2g0301821	46.774	186	97	1	143	328	86	269	7.55e-63	201
Msa0180070	MtrunA17_Chr8g0344981	46.500	200	103	3	132	330	51	247	1.06e-58	191
Msa0180070	MtrunA17_Chr2g0301751	41.818	220	113	3	124	330	59	276	2.55e-56	185
Msa0180070	MtrunA17_Chr3g0103941	37.069	232	143	3	113	342	14	244	3.47e-55	181
Msa0180070	MtrunA17_Chr3g0103871	40.265	226	133	2	101	325	20	244	1.93e-54	179
Msa0180070	MtrunA17_Chr3g0103851	41.951	205	116	2	140	342	243	446	1.03e-53	183
Msa0180070	MtrunA17_Chr3g0103961	38.806	201	118	3	144	342	55	252	2.64e-50	168
Msa0180070	MtrunA17_Chr2g0301731	38.947	190	111	2	144	332	68	253	1.34e-47	162
Msa0180070	MtrunA17_Chr3g0103931	37.619	210	125	3	134	342	43	247	4.24e-47	160
Msa0180070	MtrunA17_Chr3g0103911	34.862	218	139	3	113	328	14	230	1.58e-46	158
Msa0180070	MtrunA17_Chr3g0103891	34.862	218	139	3	113	328	14	230	1.85e-46	158
Msa0180070	MtrunA17_Chr3g0104451	35.841	226	135	3	127	342	9	234	1.17e-45	155
Msa0180070	MtrunA17_Chr4g0031461	56.911	123	50	2	224	345	3	123	5.46e-45	150
Msa0180070	MtrunA17_Chr2g0291681	37.915	211	122	2	144	346	213	422	8.91e-44	157
Msa0180070	MtrunA17_Chr3g0104441	36.364	220	131	2	127	337	13	232	8.93e-42	146
Msa0180070	MtrunA17_Chr5g0425671	35.319	235	124	6	102	325	70	287	7.89e-40	142
Msa0180070	MtrunA17_Chr5g0434721	25.882	340	202	7	3	342	29	318	3.10e-39	141
Msa0180070	MtrunA17_Chr4g0029991	35.238	210	126	4	144	345	307	514	2.43e-36	137
Msa0180070	MtrunA17_Chr3g0103861	29.469	207	109	3	135	337	49	222	2.64e-30	115
Msa0180070	MtrunA17_Chr3g0103951	38.211	123	73	2	204	325	20	140	1.13e-23	95.5
Msa0180070	MtrunA17_Chr1g0206041	92.857	42	3	0	282	323	1	42	5.93e-23	91.3
Msa0180070	MtrunA17_Chr3g0100351	28.780	205	93	5	144	345	46	200	4.52e-21	89.7
Msa0180070	MtrunA17_Chr3g0100371	27.805	205	95	5	144	347	65	217	1.07e-18	84.0
Msa0180070	MtrunA17_Chr1g0164621	29.101	189	124	6	161	345	1260	1442	5.52e-16	79.3
Msa0180070	MtrunA17_Chr3g0082091	29.016	193	119	7	161	345	1258	1440	1.02e-15	78.6
Msa0180070	MtrunA17_Chr3g0103841	45.714	70	37	1	274	342	1	70	2.18e-14	67.8
Msa0180070	MtrunA17_Chr3g0110331	26.066	211	142	8	143	347	134	336	2.89e-14	73.9
Msa0180070	MtrunA17_Chr3g0100361	24.324	185	87	4	144	325	46	180	1.30e-13	68.6
Msa0180070	MtrunA17_Chr2g0329221	28.767	219	140	10	132	343	134	343	1.55e-13	71.6
Msa0180070	MtrunA17_Chr5g0394311	33.333	105	67	2	230	334	169	270	3.80e-13	69.3
Msa0180070	MtrunA17_Chr5g0394311	52.000	50	22	1	231	280	47	94	2.94e-11	63.9
Msa0180070	MtrunA17_Chr3g0123681	28.108	185	124	5	161	341	1538	1717	1.63e-12	68.9
Msa0180070	MtrunA17_Chr3g0110341	27.027	222	146	10	132	346	146	358	3.43e-12	67.4
Msa0180070	MtrunA17_Chr4g0033361	28.070	228	149	9	122	343	115	333	1.64e-11	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0180070	AT3G53690.1	52.083	192	91	1	144	335	115	305	3.86e-72	227
Msa0180070	AT3G14250.1	37.024	289	160	5	63	343	24	298	1.66e-69	219
Msa0180070	AT4G19670.2	32.024	331	194	8	41	345	92	417	4.19e-42	154
Msa0180070	AT4G19670.3	32.024	331	194	8	41	345	92	417	4.19e-42	154
Msa0180070	AT4G19670.5	32.024	331	194	8	41	345	92	417	4.19e-42	154
Msa0180070	AT4G19670.7	32.024	331	194	8	41	345	92	417	4.19e-42	154
Msa0180070	AT4G19670.4	32.024	331	194	8	41	345	92	417	4.19e-42	154
Msa0180070	AT4G19670.1	32.024	331	194	8	41	345	92	417	4.19e-42	154
Msa0180070	AT4G19670.6	32.024	331	194	8	41	345	92	417	4.19e-42	154
Msa0180070	AT5G37560.1	35.268	224	131	5	122	342	167	379	7.54e-41	149
Msa0180070	AT2G21420.1	36.441	236	135	6	114	345	161	385	3.05e-37	139
Msa0180070	AT3G45470.1	34.975	203	129	3	144	345	6	206	5.57e-36	130
Msa0180070	AT5G60250.1	33.628	226	134	5	129	345	291	509	5.95e-34	132
Msa0180070	AT3G45540.1	31.429	210	132	6	142	346	98	300	3.82e-33	126
Msa0180070	AT3G45540.2	31.429	210	132	6	142	346	69	271	4.79e-33	125
Msa0180070	AT2G25360.1	33.478	230	144	5	121	345	67	292	7.32e-32	123
Msa0180070	AT3G45580.1	30.332	211	141	4	139	345	168	376	1.49e-31	123
Msa0180070	AT2G26135.1	33.168	202	131	4	144	343	153	352	1.50e-31	122
Msa0180070	AT2G25370.2	35.176	199	121	4	144	338	247	441	1.62e-31	124
Msa0180070	AT2G25370.1	35.176	199	121	4	144	338	304	498	2.62e-31	124
Msa0180070	AT2G26130.1	30.435	207	140	4	144	348	159	363	1.58e-29	117
Msa0180070	AT3G45480.1	25.758	330	216	10	21	345	41	346	4.97e-23	99.0
Msa0180070	AT3G45460.1	28.708	209	122	9	147	348	173	361	1.10e-22	98.2
Msa0180070	AT3G45555.1	28.161	174	121	3	153	324	27	198	2.01e-22	94.0
Msa0180070	AT3G43750.1	29.412	187	125	4	144	325	155	339	1.01e-20	92.0
Msa0180070	AT2G19610.2	28.077	260	174	6	89	336	144	402	2.25e-20	92.0
Msa0180070	AT5G10370.1	28.638	213	137	8	128	334	1547	1750	7.15e-19	88.6
Msa0180070	AT4G01020.1	27.230	213	140	7	128	334	1544	1747	1.02e-17	85.1
Msa0180070	AT3G27710.1	26.368	201	142	4	144	342	121	317	3.19e-15	77.0
Msa0180070	AT1G05890.1	26.872	227	153	8	122	343	110	328	9.83e-15	75.5
Msa0180070	AT2G19610.1	25.806	248	172	5	89	325	144	390	1.05e-14	75.1
Msa0180070	AT2G31760.1	28.571	210	130	9	144	345	121	318	1.32e-12	68.9
Msa0180070	AT3G45510.1	30.233	129	87	2	154	280	77	204	1.44e-12	67.4
Msa0180070	AT2G31770.1	27.700	213	135	10	144	347	128	330	3.94e-12	67.8
Msa0180070	AT3G45570.1	23.502	217	157	5	71	283	94	305	2.42e-11	64.3

Find 82 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAGTTCTATTGCCCCTTTA+AGG	0.193550	1_4:+67864973	Msa0180070:CDS
ATGAAGATGGACAAGATATT+AGG	0.209140	1_4:+67865023	Msa0180070:CDS
CACCTATCAATCAACTCTTT+TGG	0.279931	1_4:-67864911	None:intergenic
CAGAGGCCATTATGGTTTCT+TGG	0.291564	1_4:-67864427	None:intergenic
CATGGCAGAGCAATCCTTAA+AGG	0.291984	1_4:-67864987	None:intergenic
ATGTGGATGAGGATGCATTT+TGG	0.321183	1_4:-67864589	None:intergenic
AGGACGAGGATGAGTGGTTT+TGG	0.329149	1_4:-67864463	None:intergenic
TGTCATGTCACTTGGCATCC+TGG	0.332158	1_4:+67865088	Msa0180070:CDS
TGTTAGAGCTTGAATCTTGC+AGG	0.348834	1_4:+67864879	Msa0180070:CDS
AGTGATGACAGAGGCCATTA+TGG	0.351352	1_4:-67864435	None:intergenic
GTCATGTCACTTGGCATCCT+GGG	0.357294	1_4:+67865089	Msa0180070:CDS
TGAAGATGGACAAGATATTA+GGG	0.368949	1_4:+67865024	Msa0180070:CDS
AGTGATTGAATCTGTTTCTT+CGG	0.405402	1_4:-67864696	None:intergenic
CATCGGAGACAGGGACGTTA+TGG	0.420911	1_4:-67864379	None:intergenic
ATGGCAGAGCAATCCTTAAA+GGG	0.423315	1_4:-67864986	None:intergenic
ACTGTTCAACGAAACCCTTA+TGG	0.432751	1_4:+67864550	Msa0180070:CDS
AAATGACGAGTGACTCCATA+AGG	0.444976	1_4:-67864565	None:intergenic
CACTGTTGTTAAGACTGAAC+AGG	0.457791	1_4:+67864661	Msa0180070:CDS
TTCCAAAAGAGTTGATTGAT+AGG	0.467343	1_4:+67864909	Msa0180070:CDS
TCAACATAGAACCTGCATCT+TGG	0.469195	1_4:-67865211	None:intergenic
ACAGAACAGCCTATGACAAA+AGG	0.470976	1_4:-67865059	None:intergenic
ACACGTTTGTTATGTTGTCT+TGG	0.473385	1_4:-67864829	None:intergenic
GTCACTTGGCATCCTGGGGT+TGG	0.476032	1_4:+67865094	Msa0180070:CDS
GAGGATGGTTGTTGCGCCAT+TGG	0.477772	1_4:-67864290	None:intergenic
GGAAAAGGTGTCCAAGATGC+AGG	0.491465	1_4:+67865200	Msa0180070:CDS
TTGTCCTGGTTTGAACTGCA+AGG	0.494597	1_4:+67864853	Msa0180070:CDS
GCGTACTTGTCATCGGAGAC+AGG	0.495039	1_4:-67864389	None:intergenic
GTCATAGGCTGTTCTGTGCA+AGG	0.500633	1_4:+67865065	Msa0180070:CDS
GCATCCTGGGGTTGGTTGTG+AGG	0.501263	1_4:+67865102	Msa0180070:CDS
GATACTACGCAGAGCAATGA+AGG	0.506856	1_4:-67864614	None:intergenic
TTAAAGGGGCAATAGAACTT+AGG	0.510117	1_4:-67864971	None:intergenic
ATAACAAACGTGTCTTGTCC+TGG	0.511545	1_4:+67864839	Msa0180070:CDS
AAACAATGGTGGTGGTGAAA+AGG	0.511550	1_4:-67864486	None:intergenic
GCTATGCTTGCGGTGCAGAA+TGG	0.513596	1_4:+67866071	Msa0180070:CDS
TGAATGTGGATGAAAGAGGA+AGG	0.518591	1_4:+67865137	Msa0180070:CDS
ACAGTTCCAAGAAACCATAA+TGG	0.522488	1_4:+67864421	Msa0180070:CDS
AGATCTCCTTGTGAGGGAGC+TGG	0.527981	1_4:+67865162	Msa0180070:CDS
GATGTTTGCATATTACGTGC+AGG	0.550867	1_4:+67865245	Msa0180070:CDS
ATGCTAGATGAAAATGAAGA+TGG	0.551783	1_4:+67865010	Msa0180070:CDS
GGTGTCAAGGTCAAGGAATG+AGG	0.553325	1_4:-67864312	None:intergenic
CAATGAAGGTGATGTGGATG+AGG	0.553752	1_4:-67864600	None:intergenic
AATTTCATCGTCGGAGACAA+CGG	0.555483	1_4:-67864354	None:intergenic
CGTCTACGGTGTCAAGGTCA+AGG	0.562627	1_4:-67864319	None:intergenic
TGCTTCAGCGTACTTGTCAT+CGG	0.567735	1_4:-67864396	None:intergenic
CAGAACAGCCTATGACAAAA+GGG	0.574536	1_4:-67865058	None:intergenic
AAAAGGAGGACGAGGATGAG+TGG	0.576654	1_4:-67864469	None:intergenic
TGTCCTGGTTTGAACTGCAA+GGG	0.576754	1_4:+67864854	Msa0180070:CDS
GTGCAAGGTGTCATGTCACT+TGG	0.578094	1_4:+67865080	Msa0180070:CDS
CAAAAGAGTTGATTGATAGG+TGG	0.583180	1_4:+67864912	Msa0180070:CDS
TGGTGGTGAAAAGGAGGACG+AGG	0.591024	1_4:-67864477	None:intergenic
ACACCCTTGCAGTTCAAACC+AGG	0.598898	1_4:-67864857	None:intergenic
AAAAGTCGTCTACGGTGTCA+AGG	0.599527	1_4:-67864325	None:intergenic
GATTAGCCAGCTCCCTCACA+AGG	0.600812	1_4:-67865168	None:intergenic
AAAATGAATGATAACAACTC+AGG	0.609371	1_4:-67864769	None:intergenic
TGTTAAGACTGAACAGGCAA+AGG	0.611427	1_4:+67864667	Msa0180070:CDS
GATGCTACACACGGAAACAA+TGG	0.613629	1_4:-67864500	None:intergenic
GCAGAATGGACATCTTCTCA+TGG	0.614993	1_4:+67866085	Msa0180070:CDS
GGAGTTTCAAACAATGAATG+TGG	0.616690	1_4:+67865123	Msa0180070:CDS
ACAATGAATGTGGATGAAAG+AGG	0.616843	1_4:+67865133	Msa0180070:CDS
GTTATGGTCAATTTCATCGT+CGG	0.618382	1_4:-67864363	None:intergenic
AATGACGAGTGACTCCATAA+GGG	0.618465	1_4:-67864564	None:intergenic
CACTGTTTGTGAGATTTGTG+CGG	0.619820	1_4:+67864715	Msa0180070:CDS
CAATGGTGGTGGTGAAAAGG+AGG	0.622344	1_4:-67864483	None:intergenic
GAATGTGGATGAAAGAGGAA+GGG	0.623790	1_4:+67865138	Msa0180070:CDS
GAAGGGAAGATCTCCTTGTG+AGG	0.624223	1_4:+67865155	Msa0180070:CDS
AAGGGAAGATCTCCTTGTGA+GGG	0.626069	1_4:+67865156	Msa0180070:CDS
AACTCCTCACAACCAACCCC+AGG	0.626419	1_4:-67865106	None:intergenic
TCATGTCACTTGGCATCCTG+GGG	0.626860	1_4:+67865090	Msa0180070:CDS
GGAGAAGTAAAAGTCGTCTA+CGG	0.631739	1_4:-67864333	None:intergenic
AGGTCAAGGAATGAGGAGGA+TGG	0.638287	1_4:-67864305	None:intergenic
CGTACTTGTCATCGGAGACA+GGG	0.638650	1_4:-67864388	None:intergenic
GCAGAGCAATGAAGGTGATG+TGG	0.649869	1_4:-67864606	None:intergenic
CTGCGTAGTATCTTCATCAG+AGG	0.652005	1_4:+67864625	Msa0180070:CDS
TGAATGTGTTGTCAAACAAG+TGG	0.654131	1_4:+67864796	Msa0180070:CDS
TGGCAGAGCAATCCTTAAAG+GGG	0.655298	1_4:-67864985	None:intergenic
GTCAAGGTCAAGGAATGAGG+AGG	0.658566	1_4:-67864309	None:intergenic
GCTACACACGGAAACAATGG+TGG	0.685701	1_4:-67864497	None:intergenic
ACACACGGAAACAATGGTGG+TGG	0.687245	1_4:-67864494	None:intergenic
GTGGAATGATGCATTGTGTG+AGG	0.727329	1_4:+67864931	Msa0180070:CDS
GAATGGACATCTTCTCATGG+TGG	0.740199	1_4:+67866088	Msa0180070:CDS
TCTGATGAAGATGCTACACA+CGG	0.742176	1_4:-67864509	None:intergenic
TTGGTGAGAAGTGATGACAG+AGG	0.745687	1_4:-67864444	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAAATTGTGTTTGTTTT+TGG	+	chr1_4:67865331-67865350	Msa0180070:intron	15.0%
!!	AATTAACATAGTAAAACTAA+AGG	-	chr1_4:67865387-67865406	None:intergenic	15.0%
!!!	TGTTTAATGTTTTGATTAAA+AGG	+	chr1_4:67865807-67865826	Msa0180070:intron	15.0%
!!!	ATGATTAAAAAGTATCAATT+TGG	-	chr1_4:67865870-67865889	None:intergenic	15.0%
!!!	AACTTTAAAAAGTATCAATT+TGG	-	chr1_4:67865918-67865937	None:intergenic	15.0%
!!!	CAATTTCTTAATTATCTTTT+TGG	-	chr1_4:67865982-67866001	None:intergenic	15.0%
!!!	TTTTAAATTGTGTTTGTTTT+TGG	+	chr1_4:67865331-67865350	Msa0180070:intron	15.0%
!!	AATTAACATAGTAAAACTAA+AGG	-	chr1_4:67865387-67865406	None:intergenic	15.0%
!!!	TGTTTAATGTTTTGATTAAA+AGG	+	chr1_4:67865807-67865826	Msa0180070:intron	15.0%
!!!	ATGATTAAAAAGTATCAATT+TGG	-	chr1_4:67865870-67865889	None:intergenic	15.0%
!!!	AACTTTAAAAAGTATCAATT+TGG	-	chr1_4:67865918-67865937	None:intergenic	15.0%
!!!	CAATTTCTTAATTATCTTTT+TGG	-	chr1_4:67865982-67866001	None:intergenic	15.0%
!!!	TCAAATTGTTATTGTATACA+TGG	+	chr1_4:67865542-67865561	Msa0180070:intron	20.0%
!!!	TAATGTTTTGATTAAAAGGA+AGG	+	chr1_4:67865811-67865830	Msa0180070:intron	20.0%
!!	AATTAGTGAATAACTGAATA+AGG	+	chr1_4:67866014-67866033	Msa0180070:intron	20.0%
!!	ATTAGTGAATAACTGAATAA+GGG	+	chr1_4:67866015-67866034	Msa0180070:intron	20.0%
!!!	TCAAATTGTTATTGTATACA+TGG	+	chr1_4:67865542-67865561	Msa0180070:intron	20.0%
!!!	TAATGTTTTGATTAAAAGGA+AGG	+	chr1_4:67865811-67865830	Msa0180070:intron	20.0%
!!	AATTAGTGAATAACTGAATA+AGG	+	chr1_4:67866014-67866033	Msa0180070:intron	20.0%
!!	ATTAGTGAATAACTGAATAA+GGG	+	chr1_4:67866015-67866034	Msa0180070:intron	20.0%
!	AAAATGAATGATAACAACTC+AGG	-	chr1_4:67864772-67864791	None:intergenic	25.0%
!	TTCTATGTTGAAAAAAAGGA+TGG	+	chr1_4:67865223-67865242	Msa0180070:CDS	25.0%
!!	TTTTGGTATTGTCATCTTTT+TGG	+	chr1_4:67865348-67865367	Msa0180070:intron	25.0%
!!	TTTGGTATTGTCATCTTTTT+GGG	+	chr1_4:67865349-67865368	Msa0180070:intron	25.0%
!	GTTAAACTAATTTGAGCTAA+GGG	-	chr1_4:67865506-67865525	None:intergenic	25.0%
!	AGTTAAACTAATTTGAGCTA+AGG	-	chr1_4:67865507-67865526	None:intergenic	25.0%
!	ACAATAACAATTTGAGCTAA+GGG	-	chr1_4:67865537-67865556	None:intergenic	25.0%
!	TACAATAACAATTTGAGCTA+AGG	-	chr1_4:67865538-67865557	None:intergenic	25.0%
!	GATAATAGTTTATGTACAAG+GGG	-	chr1_4:67865645-67865664	None:intergenic	25.0%
!	CGATAATAGTTTATGTACAA+GGG	-	chr1_4:67865646-67865665	None:intergenic	25.0%
!	ACGATAATAGTTTATGTACA+AGG	-	chr1_4:67865647-67865666	None:intergenic	25.0%
!	TACATAAACTATTATCGTAG+TGG	+	chr1_4:67865649-67865668	Msa0180070:intron	25.0%
!!!	TTATTTTTGGAAGTTCAAGT+TGG	-	chr1_4:67865946-67865965	None:intergenic	25.0%
!	AACTTGAACTTCCAAAAATA+AGG	+	chr1_4:67865945-67865964	Msa0180070:intron	25.0%
!!!	TCTTTTAACCTCCTTATTTT+TGG	-	chr1_4:67865959-67865978	None:intergenic	25.0%
!	AAAATGAATGATAACAACTC+AGG	-	chr1_4:67864772-67864791	None:intergenic	25.0%
!	TTCTATGTTGAAAAAAAGGA+TGG	+	chr1_4:67865223-67865242	Msa0180070:CDS	25.0%
!!	TTTTGGTATTGTCATCTTTT+TGG	+	chr1_4:67865348-67865367	Msa0180070:intron	25.0%
!!	TTTGGTATTGTCATCTTTTT+GGG	+	chr1_4:67865349-67865368	Msa0180070:intron	25.0%
!	GTTAAACTAATTTGAGCTAA+GGG	-	chr1_4:67865506-67865525	None:intergenic	25.0%
!	AGTTAAACTAATTTGAGCTA+AGG	-	chr1_4:67865507-67865526	None:intergenic	25.0%
!	ACAATAACAATTTGAGCTAA+GGG	-	chr1_4:67865537-67865556	None:intergenic	25.0%
!	TACAATAACAATTTGAGCTA+AGG	-	chr1_4:67865538-67865557	None:intergenic	25.0%
!	GATAATAGTTTATGTACAAG+GGG	-	chr1_4:67865645-67865664	None:intergenic	25.0%
!	CGATAATAGTTTATGTACAA+GGG	-	chr1_4:67865646-67865665	None:intergenic	25.0%
!	ACGATAATAGTTTATGTACA+AGG	-	chr1_4:67865647-67865666	None:intergenic	25.0%
!	TACATAAACTATTATCGTAG+TGG	+	chr1_4:67865649-67865668	Msa0180070:intron	25.0%
!!!	TTATTTTTGGAAGTTCAAGT+TGG	-	chr1_4:67865946-67865965	None:intergenic	25.0%
!	AACTTGAACTTCCAAAAATA+AGG	+	chr1_4:67865945-67865964	Msa0180070:intron	25.0%
!!!	TCTTTTAACCTCCTTATTTT+TGG	-	chr1_4:67865959-67865978	None:intergenic	25.0%
!	AGTGATTGAATCTGTTTCTT+CGG	-	chr1_4:67864699-67864718	None:intergenic	30.0%
!	TTCCAAAAGAGTTGATTGAT+AGG	+	chr1_4:67864909-67864928	Msa0180070:CDS	30.0%
!	TTCATTTTCATCTAGCATCA+TGG	-	chr1_4:67865008-67865027	None:intergenic	30.0%
	ATGCTAGATGAAAATGAAGA+TGG	+	chr1_4:67865010-67865029	Msa0180070:CDS	30.0%
	ATGAAGATGGACAAGATATT+AGG	+	chr1_4:67865023-67865042	Msa0180070:CDS	30.0%
	TGAAGATGGACAAGATATTA+GGG	+	chr1_4:67865024-67865043	Msa0180070:CDS	30.0%
	CTAATCAGAAAAAGTGGAAA+AGG	+	chr1_4:67865185-67865204	Msa0180070:CDS	30.0%
	CAGGTTCTATGTTGAAAAAA+AGG	+	chr1_4:67865219-67865238	Msa0180070:CDS	30.0%
!!	AGGTCAGTTTGTTCTATTTT+CGG	+	chr1_4:67865265-67865284	Msa0180070:intron	30.0%
!	AGAGTACATAGTTCAAGTTA+TGG	-	chr1_4:67865472-67865491	None:intergenic	30.0%
	CAATAACAATTTGAGCTAAG+GGG	-	chr1_4:67865536-67865555	None:intergenic	30.0%
	ATGGTGAATTAAACTAGTGA+AGG	+	chr1_4:67865561-67865580	Msa0180070:intron	30.0%
!	GTCTTCTTGTTTCAAATCTA+AGG	+	chr1_4:67865583-67865602	Msa0180070:intron	30.0%
!!	GGTGTTATAGAATTCCTTTT+TGG	+	chr1_4:67865689-67865708	Msa0180070:intron	30.0%
!!	TATAGAATTCCTTTTTGGTG+TGG	+	chr1_4:67865694-67865713	Msa0180070:intron	30.0%
	TTGAACTTCCAAAAATAAGG+AGG	+	chr1_4:67865948-67865967	Msa0180070:intron	30.0%
!	AGTGATTGAATCTGTTTCTT+CGG	-	chr1_4:67864699-67864718	None:intergenic	30.0%
!	TTCCAAAAGAGTTGATTGAT+AGG	+	chr1_4:67864909-67864928	Msa0180070:CDS	30.0%
!	TTCATTTTCATCTAGCATCA+TGG	-	chr1_4:67865008-67865027	None:intergenic	30.0%
	ATGCTAGATGAAAATGAAGA+TGG	+	chr1_4:67865010-67865029	Msa0180070:CDS	30.0%
	ATGAAGATGGACAAGATATT+AGG	+	chr1_4:67865023-67865042	Msa0180070:CDS	30.0%
	TGAAGATGGACAAGATATTA+GGG	+	chr1_4:67865024-67865043	Msa0180070:CDS	30.0%
	CTAATCAGAAAAAGTGGAAA+AGG	+	chr1_4:67865185-67865204	Msa0180070:CDS	30.0%
	CAGGTTCTATGTTGAAAAAA+AGG	+	chr1_4:67865219-67865238	Msa0180070:CDS	30.0%
!!	AGGTCAGTTTGTTCTATTTT+CGG	+	chr1_4:67865265-67865284	Msa0180070:intron	30.0%
!	AGAGTACATAGTTCAAGTTA+TGG	-	chr1_4:67865472-67865491	None:intergenic	30.0%
	CAATAACAATTTGAGCTAAG+GGG	-	chr1_4:67865536-67865555	None:intergenic	30.0%
	ATGGTGAATTAAACTAGTGA+AGG	+	chr1_4:67865561-67865580	Msa0180070:intron	30.0%
!	GTCTTCTTGTTTCAAATCTA+AGG	+	chr1_4:67865583-67865602	Msa0180070:intron	30.0%
!!	GGTGTTATAGAATTCCTTTT+TGG	+	chr1_4:67865689-67865708	Msa0180070:intron	30.0%
!!	TATAGAATTCCTTTTTGGTG+TGG	+	chr1_4:67865694-67865713	Msa0180070:intron	30.0%
	TTGAACTTCCAAAAATAAGG+AGG	+	chr1_4:67865948-67865967	Msa0180070:intron	30.0%
	GTTATGGTCAATTTCATCGT+CGG	-	chr1_4:67864366-67864385	None:intergenic	35.0%
	ACAGTTCCAAGAAACCATAA+TGG	+	chr1_4:67864421-67864440	Msa0180070:CDS	35.0%
	TGAATGTGTTGTCAAACAAG+TGG	+	chr1_4:67864796-67864815	Msa0180070:CDS	35.0%
!!	ACACGTTTGTTATGTTGTCT+TGG	-	chr1_4:67864832-67864851	None:intergenic	35.0%
!	CACCTATCAATCAACTCTTT+TGG	-	chr1_4:67864914-67864933	None:intergenic	35.0%
!	CAAAAGAGTTGATTGATAGG+TGG	+	chr1_4:67864912-67864931	Msa0180070:CDS	35.0%
	TTAAAGGGGCAATAGAACTT+AGG	-	chr1_4:67864974-67864993	None:intergenic	35.0%
	TAAGTTCTATTGCCCCTTTA+AGG	+	chr1_4:67864973-67864992	Msa0180070:CDS	35.0%
	GGAGTTTCAAACAATGAATG+TGG	+	chr1_4:67865123-67865142	Msa0180070:CDS	35.0%
	ACAATGAATGTGGATGAAAG+AGG	+	chr1_4:67865133-67865152	Msa0180070:CDS	35.0%
!	TATTTGGGGAGTGGATTTAT+GGG	+	chr1_4:67865771-67865790	Msa0180070:intron	35.0%
	TTGACTGTGTTAACTCATGA+TGG	-	chr1_4:67865838-67865857	None:intergenic	35.0%
	AGTGAATAACTGAATAAGGG+TGG	+	chr1_4:67866018-67866037	Msa0180070:intron	35.0%
!!	TTTGAGTTTTGCTATGCTTG+CGG	+	chr1_4:67866061-67866080	Msa0180070:CDS	35.0%
	GTTATGGTCAATTTCATCGT+CGG	-	chr1_4:67864366-67864385	None:intergenic	35.0%
	ACAGTTCCAAGAAACCATAA+TGG	+	chr1_4:67864421-67864440	Msa0180070:CDS	35.0%
	TGAATGTGTTGTCAAACAAG+TGG	+	chr1_4:67864796-67864815	Msa0180070:CDS	35.0%
!!	ACACGTTTGTTATGTTGTCT+TGG	-	chr1_4:67864832-67864851	None:intergenic	35.0%
!	CACCTATCAATCAACTCTTT+TGG	-	chr1_4:67864914-67864933	None:intergenic	35.0%
!	CAAAAGAGTTGATTGATAGG+TGG	+	chr1_4:67864912-67864931	Msa0180070:CDS	35.0%
	TTAAAGGGGCAATAGAACTT+AGG	-	chr1_4:67864974-67864993	None:intergenic	35.0%
	TAAGTTCTATTGCCCCTTTA+AGG	+	chr1_4:67864973-67864992	Msa0180070:CDS	35.0%
	GGAGTTTCAAACAATGAATG+TGG	+	chr1_4:67865123-67865142	Msa0180070:CDS	35.0%
	ACAATGAATGTGGATGAAAG+AGG	+	chr1_4:67865133-67865152	Msa0180070:CDS	35.0%
!	TATTTGGGGAGTGGATTTAT+GGG	+	chr1_4:67865771-67865790	Msa0180070:intron	35.0%
	TTGACTGTGTTAACTCATGA+TGG	-	chr1_4:67865838-67865857	None:intergenic	35.0%
	AGTGAATAACTGAATAAGGG+TGG	+	chr1_4:67866018-67866037	Msa0180070:intron	35.0%
!!	TTTGAGTTTTGCTATGCTTG+CGG	+	chr1_4:67866061-67866080	Msa0180070:CDS	35.0%
	GGAGAAGTAAAAGTCGTCTA+CGG	-	chr1_4:67864336-67864355	None:intergenic	40.0%
	AATTTCATCGTCGGAGACAA+CGG	-	chr1_4:67864357-67864376	None:intergenic	40.0%
!!	AAACAATGGTGGTGGTGAAA+AGG	-	chr1_4:67864489-67864508	None:intergenic	40.0%
	TCTGATGAAGATGCTACACA+CGG	-	chr1_4:67864512-67864531	None:intergenic	40.0%
	ACTGTTCAACGAAACCCTTA+TGG	+	chr1_4:67864550-67864569	Msa0180070:CDS	40.0%
	AATGACGAGTGACTCCATAA+GGG	-	chr1_4:67864567-67864586	None:intergenic	40.0%
	AAATGACGAGTGACTCCATA+AGG	-	chr1_4:67864568-67864587	None:intergenic	40.0%
!	TGTGGATGAGGATGCATTTT+GGG	-	chr1_4:67864591-67864610	None:intergenic	40.0%
!	ATGTGGATGAGGATGCATTT+TGG	-	chr1_4:67864592-67864611	None:intergenic	40.0%
	CACTGTTGTTAAGACTGAAC+AGG	+	chr1_4:67864661-67864680	Msa0180070:CDS	40.0%
	TGTTAAGACTGAACAGGCAA+AGG	+	chr1_4:67864667-67864686	Msa0180070:CDS	40.0%
	CACTGTTTGTGAGATTTGTG+CGG	+	chr1_4:67864715-67864734	Msa0180070:CDS	40.0%
	ATAACAAACGTGTCTTGTCC+TGG	+	chr1_4:67864839-67864858	Msa0180070:CDS	40.0%
	TGTTAGAGCTTGAATCTTGC+AGG	+	chr1_4:67864879-67864898	Msa0180070:CDS	40.0%
	ATGGCAGAGCAATCCTTAAA+GGG	-	chr1_4:67864989-67865008	None:intergenic	40.0%
	CAGAACAGCCTATGACAAAA+GGG	-	chr1_4:67865061-67865080	None:intergenic	40.0%
	ACAGAACAGCCTATGACAAA+AGG	-	chr1_4:67865062-67865081	None:intergenic	40.0%
	TGAATGTGGATGAAAGAGGA+AGG	+	chr1_4:67865137-67865156	Msa0180070:CDS	40.0%
	GAATGTGGATGAAAGAGGAA+GGG	+	chr1_4:67865138-67865157	Msa0180070:CDS	40.0%
	AGCTGGCTAATCAGAAAAAG+TGG	+	chr1_4:67865179-67865198	Msa0180070:CDS	40.0%
	TCAACATAGAACCTGCATCT+TGG	-	chr1_4:67865214-67865233	None:intergenic	40.0%
	GATGTTTGCATATTACGTGC+AGG	+	chr1_4:67865245-67865264	Msa0180070:CDS	40.0%
	CATTCTCCTTGTCCAGATTT+AGG	+	chr1_4:67865616-67865635	Msa0180070:intron	40.0%
	ATTCTATAACACCACACTGG+AGG	-	chr1_4:67865682-67865701	None:intergenic	40.0%
	GGAATTCTATAACACCACAC+TGG	-	chr1_4:67865685-67865704	None:intergenic	40.0%
!!	ATTCCTTTTTGGTGTGGCAT+TGG	+	chr1_4:67865700-67865719	Msa0180070:intron	40.0%
	GAGTCTTGACATAAGTCGTT+TGG	+	chr1_4:67865741-67865760	Msa0180070:intron	40.0%
!	CTATTTGGGGAGTGGATTTA+TGG	+	chr1_4:67865770-67865789	Msa0180070:intron	40.0%
!	ATTTGGGGAGTGGATTTATG+GGG	+	chr1_4:67865772-67865791	Msa0180070:intron	40.0%
	GGAGAAGTAAAAGTCGTCTA+CGG	-	chr1_4:67864336-67864355	None:intergenic	40.0%
	AATTTCATCGTCGGAGACAA+CGG	-	chr1_4:67864357-67864376	None:intergenic	40.0%
!!	AAACAATGGTGGTGGTGAAA+AGG	-	chr1_4:67864489-67864508	None:intergenic	40.0%
	TCTGATGAAGATGCTACACA+CGG	-	chr1_4:67864512-67864531	None:intergenic	40.0%
	ACTGTTCAACGAAACCCTTA+TGG	+	chr1_4:67864550-67864569	Msa0180070:CDS	40.0%
	AATGACGAGTGACTCCATAA+GGG	-	chr1_4:67864567-67864586	None:intergenic	40.0%
	AAATGACGAGTGACTCCATA+AGG	-	chr1_4:67864568-67864587	None:intergenic	40.0%
!	TGTGGATGAGGATGCATTTT+GGG	-	chr1_4:67864591-67864610	None:intergenic	40.0%
!	ATGTGGATGAGGATGCATTT+TGG	-	chr1_4:67864592-67864611	None:intergenic	40.0%
	CACTGTTGTTAAGACTGAAC+AGG	+	chr1_4:67864661-67864680	Msa0180070:CDS	40.0%
	TGTTAAGACTGAACAGGCAA+AGG	+	chr1_4:67864667-67864686	Msa0180070:CDS	40.0%
	CACTGTTTGTGAGATTTGTG+CGG	+	chr1_4:67864715-67864734	Msa0180070:CDS	40.0%
	ATAACAAACGTGTCTTGTCC+TGG	+	chr1_4:67864839-67864858	Msa0180070:CDS	40.0%
	TGTTAGAGCTTGAATCTTGC+AGG	+	chr1_4:67864879-67864898	Msa0180070:CDS	40.0%
	ATGGCAGAGCAATCCTTAAA+GGG	-	chr1_4:67864989-67865008	None:intergenic	40.0%
	CAGAACAGCCTATGACAAAA+GGG	-	chr1_4:67865061-67865080	None:intergenic	40.0%
	ACAGAACAGCCTATGACAAA+AGG	-	chr1_4:67865062-67865081	None:intergenic	40.0%
	TGAATGTGGATGAAAGAGGA+AGG	+	chr1_4:67865137-67865156	Msa0180070:CDS	40.0%
	GAATGTGGATGAAAGAGGAA+GGG	+	chr1_4:67865138-67865157	Msa0180070:CDS	40.0%
	AGCTGGCTAATCAGAAAAAG+TGG	+	chr1_4:67865179-67865198	Msa0180070:CDS	40.0%
	TCAACATAGAACCTGCATCT+TGG	-	chr1_4:67865214-67865233	None:intergenic	40.0%
	GATGTTTGCATATTACGTGC+AGG	+	chr1_4:67865245-67865264	Msa0180070:CDS	40.0%
	CATTCTCCTTGTCCAGATTT+AGG	+	chr1_4:67865616-67865635	Msa0180070:intron	40.0%
	ATTCTATAACACCACACTGG+AGG	-	chr1_4:67865682-67865701	None:intergenic	40.0%
	GGAATTCTATAACACCACAC+TGG	-	chr1_4:67865685-67865704	None:intergenic	40.0%
!!	ATTCCTTTTTGGTGTGGCAT+TGG	+	chr1_4:67865700-67865719	Msa0180070:intron	40.0%
	GAGTCTTGACATAAGTCGTT+TGG	+	chr1_4:67865741-67865760	Msa0180070:intron	40.0%
!	CTATTTGGGGAGTGGATTTA+TGG	+	chr1_4:67865770-67865789	Msa0180070:intron	40.0%
!	ATTTGGGGAGTGGATTTATG+GGG	+	chr1_4:67865772-67865791	Msa0180070:intron	40.0%
!	AAAAGTCGTCTACGGTGTCA+AGG	-	chr1_4:67864328-67864347	None:intergenic	45.0%
	TGCTTCAGCGTACTTGTCAT+CGG	-	chr1_4:67864399-67864418	None:intergenic	45.0%
	CAGAGGCCATTATGGTTTCT+TGG	-	chr1_4:67864430-67864449	None:intergenic	45.0%
	AGTGATGACAGAGGCCATTA+TGG	-	chr1_4:67864438-67864457	None:intergenic	45.0%
	TTGGTGAGAAGTGATGACAG+AGG	-	chr1_4:67864447-67864466	None:intergenic	45.0%
	GATGCTACACACGGAAACAA+TGG	-	chr1_4:67864503-67864522	None:intergenic	45.0%
	CAATGAAGGTGATGTGGATG+AGG	-	chr1_4:67864603-67864622	None:intergenic	45.0%
	GATACTACGCAGAGCAATGA+AGG	-	chr1_4:67864617-67864636	None:intergenic	45.0%
	CTGCGTAGTATCTTCATCAG+AGG	+	chr1_4:67864625-67864644	Msa0180070:CDS	45.0%
!	TTGTCCTGGTTTGAACTGCA+AGG	+	chr1_4:67864853-67864872	Msa0180070:CDS	45.0%
!	TGTCCTGGTTTGAACTGCAA+GGG	+	chr1_4:67864854-67864873	Msa0180070:CDS	45.0%
	GTGGAATGATGCATTGTGTG+AGG	+	chr1_4:67864931-67864950	Msa0180070:CDS	45.0%
	TGGCAGAGCAATCCTTAAAG+GGG	-	chr1_4:67864988-67865007	None:intergenic	45.0%
	CATGGCAGAGCAATCCTTAA+AGG	-	chr1_4:67864990-67865009	None:intergenic	45.0%
!	CTGAGTGTCCCTTTTGTCAT+AGG	+	chr1_4:67865050-67865069	Msa0180070:CDS	45.0%
	AAGGGAAGATCTCCTTGTGA+GGG	+	chr1_4:67865156-67865175	Msa0180070:CDS	45.0%
!!	TACAAGGGGTGTCCTAAATC+TGG	-	chr1_4:67865631-67865650	None:intergenic	45.0%
	CTTCCAATGCCACACCAAAA+AGG	-	chr1_4:67865706-67865725	None:intergenic	45.0%
	CTTGACATAAGTCGTTTGGC+AGG	+	chr1_4:67865745-67865764	Msa0180070:intron	45.0%
	TCGTTTGGCAGGAGCTATTT+GGG	+	chr1_4:67865756-67865775	Msa0180070:intron	45.0%
	TAAGGGTGGTGTTTGTTTGC+AGG	+	chr1_4:67866032-67866051	Msa0180070:intron	45.0%
	GCAGAATGGACATCTTCTCA+TGG	+	chr1_4:67866085-67866104	Msa0180070:CDS	45.0%
	GAATGGACATCTTCTCATGG+TGG	+	chr1_4:67866088-67866107	Msa0180070:CDS	45.0%
!	AAAAGTCGTCTACGGTGTCA+AGG	-	chr1_4:67864328-67864347	None:intergenic	45.0%
	TGCTTCAGCGTACTTGTCAT+CGG	-	chr1_4:67864399-67864418	None:intergenic	45.0%
	CAGAGGCCATTATGGTTTCT+TGG	-	chr1_4:67864430-67864449	None:intergenic	45.0%
	AGTGATGACAGAGGCCATTA+TGG	-	chr1_4:67864438-67864457	None:intergenic	45.0%
	TTGGTGAGAAGTGATGACAG+AGG	-	chr1_4:67864447-67864466	None:intergenic	45.0%
	GATGCTACACACGGAAACAA+TGG	-	chr1_4:67864503-67864522	None:intergenic	45.0%
	CAATGAAGGTGATGTGGATG+AGG	-	chr1_4:67864603-67864622	None:intergenic	45.0%
	GATACTACGCAGAGCAATGA+AGG	-	chr1_4:67864617-67864636	None:intergenic	45.0%
	CTGCGTAGTATCTTCATCAG+AGG	+	chr1_4:67864625-67864644	Msa0180070:CDS	45.0%
!	TTGTCCTGGTTTGAACTGCA+AGG	+	chr1_4:67864853-67864872	Msa0180070:CDS	45.0%
!	TGTCCTGGTTTGAACTGCAA+GGG	+	chr1_4:67864854-67864873	Msa0180070:CDS	45.0%
	GTGGAATGATGCATTGTGTG+AGG	+	chr1_4:67864931-67864950	Msa0180070:CDS	45.0%
	TGGCAGAGCAATCCTTAAAG+GGG	-	chr1_4:67864988-67865007	None:intergenic	45.0%
	CATGGCAGAGCAATCCTTAA+AGG	-	chr1_4:67864990-67865009	None:intergenic	45.0%
!	CTGAGTGTCCCTTTTGTCAT+AGG	+	chr1_4:67865050-67865069	Msa0180070:CDS	45.0%
	AAGGGAAGATCTCCTTGTGA+GGG	+	chr1_4:67865156-67865175	Msa0180070:CDS	45.0%
!!	TACAAGGGGTGTCCTAAATC+TGG	-	chr1_4:67865631-67865650	None:intergenic	45.0%
	CTTCCAATGCCACACCAAAA+AGG	-	chr1_4:67865706-67865725	None:intergenic	45.0%
	CTTGACATAAGTCGTTTGGC+AGG	+	chr1_4:67865745-67865764	Msa0180070:intron	45.0%
	TCGTTTGGCAGGAGCTATTT+GGG	+	chr1_4:67865756-67865775	Msa0180070:intron	45.0%
	TAAGGGTGGTGTTTGTTTGC+AGG	+	chr1_4:67866032-67866051	Msa0180070:intron	45.0%
	GCAGAATGGACATCTTCTCA+TGG	+	chr1_4:67866085-67866104	Msa0180070:CDS	45.0%
	GAATGGACATCTTCTCATGG+TGG	+	chr1_4:67866088-67866107	Msa0180070:CDS	45.0%
	AGGTCAAGGAATGAGGAGGA+TGG	-	chr1_4:67864308-67864327	None:intergenic	50.0%
	GTCAAGGTCAAGGAATGAGG+AGG	-	chr1_4:67864312-67864331	None:intergenic	50.0%
	GGTGTCAAGGTCAAGGAATG+AGG	-	chr1_4:67864315-67864334	None:intergenic	50.0%
	CGTACTTGTCATCGGAGACA+GGG	-	chr1_4:67864391-67864410	None:intergenic	50.0%
!	AGGACGAGGATGAGTGGTTT+TGG	-	chr1_4:67864466-67864485	None:intergenic	50.0%
	AAAAGGAGGACGAGGATGAG+TGG	-	chr1_4:67864472-67864491	None:intergenic	50.0%
!!	CAATGGTGGTGGTGAAAAGG+AGG	-	chr1_4:67864486-67864505	None:intergenic	50.0%
	ACACACGGAAACAATGGTGG+TGG	-	chr1_4:67864497-67864516	None:intergenic	50.0%
	GCTACACACGGAAACAATGG+TGG	-	chr1_4:67864500-67864519	None:intergenic	50.0%
	GCAGAGCAATGAAGGTGATG+TGG	-	chr1_4:67864609-67864628	None:intergenic	50.0%
	ACACCCTTGCAGTTCAAACC+AGG	-	chr1_4:67864860-67864879	None:intergenic	50.0%
	GTCATAGGCTGTTCTGTGCA+AGG	+	chr1_4:67865065-67865084	Msa0180070:CDS	50.0%
!	GTGCAAGGTGTCATGTCACT+TGG	+	chr1_4:67865080-67865099	Msa0180070:CDS	50.0%
!	TGTCATGTCACTTGGCATCC+TGG	+	chr1_4:67865088-67865107	Msa0180070:CDS	50.0%
!	GTCATGTCACTTGGCATCCT+GGG	+	chr1_4:67865089-67865108	Msa0180070:CDS	50.0%
!	TCATGTCACTTGGCATCCTG+GGG	+	chr1_4:67865090-67865109	Msa0180070:CDS	50.0%
	GAAGGGAAGATCTCCTTGTG+AGG	+	chr1_4:67865155-67865174	Msa0180070:CDS	50.0%
!!	GGAAAAGGTGTCCAAGATGC+AGG	+	chr1_4:67865200-67865219	Msa0180070:CDS	50.0%
	GGGTGTCCTAAATCTGGACA+AGG	-	chr1_4:67865625-67865644	None:intergenic	50.0%
	GTCGTTTGGCAGGAGCTATT+TGG	+	chr1_4:67865755-67865774	Msa0180070:intron	50.0%
	CGTTTGGCAGGAGCTATTTG+GGG	+	chr1_4:67865757-67865776	Msa0180070:intron	50.0%
	AGGTCAAGGAATGAGGAGGA+TGG	-	chr1_4:67864308-67864327	None:intergenic	50.0%
	GTCAAGGTCAAGGAATGAGG+AGG	-	chr1_4:67864312-67864331	None:intergenic	50.0%
	GGTGTCAAGGTCAAGGAATG+AGG	-	chr1_4:67864315-67864334	None:intergenic	50.0%
	CGTACTTGTCATCGGAGACA+GGG	-	chr1_4:67864391-67864410	None:intergenic	50.0%
!	AGGACGAGGATGAGTGGTTT+TGG	-	chr1_4:67864466-67864485	None:intergenic	50.0%
	AAAAGGAGGACGAGGATGAG+TGG	-	chr1_4:67864472-67864491	None:intergenic	50.0%
!!	CAATGGTGGTGGTGAAAAGG+AGG	-	chr1_4:67864486-67864505	None:intergenic	50.0%
	ACACACGGAAACAATGGTGG+TGG	-	chr1_4:67864497-67864516	None:intergenic	50.0%
	GCTACACACGGAAACAATGG+TGG	-	chr1_4:67864500-67864519	None:intergenic	50.0%
	GCAGAGCAATGAAGGTGATG+TGG	-	chr1_4:67864609-67864628	None:intergenic	50.0%
	ACACCCTTGCAGTTCAAACC+AGG	-	chr1_4:67864860-67864879	None:intergenic	50.0%
	GTCATAGGCTGTTCTGTGCA+AGG	+	chr1_4:67865065-67865084	Msa0180070:CDS	50.0%
!	GTGCAAGGTGTCATGTCACT+TGG	+	chr1_4:67865080-67865099	Msa0180070:CDS	50.0%
!	TGTCATGTCACTTGGCATCC+TGG	+	chr1_4:67865088-67865107	Msa0180070:CDS	50.0%
!	GTCATGTCACTTGGCATCCT+GGG	+	chr1_4:67865089-67865108	Msa0180070:CDS	50.0%
!	TCATGTCACTTGGCATCCTG+GGG	+	chr1_4:67865090-67865109	Msa0180070:CDS	50.0%
	GAAGGGAAGATCTCCTTGTG+AGG	+	chr1_4:67865155-67865174	Msa0180070:CDS	50.0%
!!	GGAAAAGGTGTCCAAGATGC+AGG	+	chr1_4:67865200-67865219	Msa0180070:CDS	50.0%
	GGGTGTCCTAAATCTGGACA+AGG	-	chr1_4:67865625-67865644	None:intergenic	50.0%
	GTCGTTTGGCAGGAGCTATT+TGG	+	chr1_4:67865755-67865774	Msa0180070:intron	50.0%
	CGTTTGGCAGGAGCTATTTG+GGG	+	chr1_4:67865757-67865776	Msa0180070:intron	50.0%
!	CGTCTACGGTGTCAAGGTCA+AGG	-	chr1_4:67864322-67864341	None:intergenic	55.0%
	CATCGGAGACAGGGACGTTA+TGG	-	chr1_4:67864382-67864401	None:intergenic	55.0%
	GCGTACTTGTCATCGGAGAC+AGG	-	chr1_4:67864392-67864411	None:intergenic	55.0%
!	TGGTGGTGAAAAGGAGGACG+AGG	-	chr1_4:67864480-67864499	None:intergenic	55.0%
	AACTCCTCACAACCAACCCC+AGG	-	chr1_4:67865109-67865128	None:intergenic	55.0%
	AGATCTCCTTGTGAGGGAGC+TGG	+	chr1_4:67865162-67865181	Msa0180070:CDS	55.0%
!	GATTAGCCAGCTCCCTCACA+AGG	-	chr1_4:67865171-67865190	None:intergenic	55.0%
!	GTGGTTTGTGTCCTCCAGTG+TGG	+	chr1_4:67865668-67865687	Msa0180070:intron	55.0%
!	GGGAGTGGATTTATGGGGAG+TGG	+	chr1_4:67865777-67865796	Msa0180070:intron	55.0%
	GCTATGCTTGCGGTGCAGAA+TGG	+	chr1_4:67866071-67866090	Msa0180070:CDS	55.0%
!	CGTCTACGGTGTCAAGGTCA+AGG	-	chr1_4:67864322-67864341	None:intergenic	55.0%
	CATCGGAGACAGGGACGTTA+TGG	-	chr1_4:67864382-67864401	None:intergenic	55.0%
	GCGTACTTGTCATCGGAGAC+AGG	-	chr1_4:67864392-67864411	None:intergenic	55.0%
!	TGGTGGTGAAAAGGAGGACG+AGG	-	chr1_4:67864480-67864499	None:intergenic	55.0%
	AACTCCTCACAACCAACCCC+AGG	-	chr1_4:67865109-67865128	None:intergenic	55.0%
	AGATCTCCTTGTGAGGGAGC+TGG	+	chr1_4:67865162-67865181	Msa0180070:CDS	55.0%
!	GATTAGCCAGCTCCCTCACA+AGG	-	chr1_4:67865171-67865190	None:intergenic	55.0%
!	GTGGTTTGTGTCCTCCAGTG+TGG	+	chr1_4:67865668-67865687	Msa0180070:intron	55.0%
!	GGGAGTGGATTTATGGGGAG+TGG	+	chr1_4:67865777-67865796	Msa0180070:intron	55.0%
	GCTATGCTTGCGGTGCAGAA+TGG	+	chr1_4:67866071-67866090	Msa0180070:CDS	55.0%
	GTCACTTGGCATCCTGGGGT+TGG	+	chr1_4:67865094-67865113	Msa0180070:CDS	60.0%
!!	GCATCCTGGGGTTGGTTGTG+AGG	+	chr1_4:67865102-67865121	Msa0180070:CDS	60.0%
	GGCAGGAGCTATTTGGGGAG+TGG	+	chr1_4:67865762-67865781	Msa0180070:intron	60.0%
	GTCACTTGGCATCCTGGGGT+TGG	+	chr1_4:67865094-67865113	Msa0180070:CDS	60.0%
!!	GCATCCTGGGGTTGGTTGTG+AGG	+	chr1_4:67865102-67865121	Msa0180070:CDS	60.0%
	GGCAGGAGCTATTTGGGGAG+TGG	+	chr1_4:67865762-67865781	Msa0180070:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	67864293	67866126	67864293	ID=Msa0180070;Name=Msa0180070
chr1_4	mRNA	67864293	67866126	67864293	ID=Msa0180070-mRNA-1;Parent=Msa0180070;Name=Msa0180070-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0\|0\|0\|1\|1\|1\|2\|0\|348
chr1_4	exon	67864293	67865266	67864293	ID=Msa0180070-mRNA-1:exon:22343;Parent=Msa0180070-mRNA-1
chr1_4	exon	67866054	67866126	67866054	ID=Msa0180070-mRNA-1:exon:22344;Parent=Msa0180070-mRNA-1
chr1_4	CDS	67864293	67865266	67864293	ID=Msa0180070-mRNA-1:cds;Parent=Msa0180070-mRNA-1
chr1_4	CDS	67866054	67866126	67866054	ID=Msa0180070-mRNA-1:cds;Parent=Msa0180070-mRNA-1

Gene Sequence

>Msa0180070

ATGGCGCAACAACCATCCTCCTCATTCCTTGACCTTGACACCGTAGACGACTTTTACTTCTCCGTTGTCTCCGACGATGAAATTGACCATAACGTCCCTGTCTCCGATGACAAGTACGCTGAAGCATTACAGTTCCAAGAAACCATAATGGCCTCTGTCATCACTTCTCACCAAAACCACTCATCCTCGTCCTCCTTTTCACCACCACCATTGTTTCCGTGTGTAGCATCTTCATCAGAAACTGTCGATGATGAGTTACTGTTCAACGAAACCCTTATGGAGTCACTCGTCATTTCCCAAAATGCATCCTCATCCACATCACCTTCATTGCTCTGCGTAGTATCTTCATCAGAGGTAGTTGATGTTGACACTGTTGTTAAGACTGAACAGGCAAAGGTCGTTACCGAAGAAACAGATTCAATCACTGTTTGTGAGATTTGTGCGGAAACAAAAATGACTGATGAAATGTTTATAAACCTGAGTTGTTATCATTCATTTTGTTCTGAATGTGTTGTCAAACAAGTGGCTACAAAAATCCAAGACAACATAACAAACGTGTCTTGTCCTGGTTTGAACTGCAAGGGTGTGTTAGAGCTTGAATCTTGCAGGTCATTGCTTCCAAAAGAGTTGATTGATAGGTGGAATGATGCATTGTGTGAGGCTTTTTTTCTTGCTGTTCCTAAGTTCTATTGCCCCTTTAAGGATTGCTCTGCCATGATGCTAGATGAAAATGAAGATGGACAAGATATTAGGGAATCTGAGTGTCCCTTTTGTCATAGGCTGTTCTGTGCAAGGTGTCATGTCACTTGGCATCCTGGGGTTGGTTGTGAGGAGTTTCAAACAATGAATGTGGATGAAAGAGGAAGGGAAGATCTCCTTGTGAGGGAGCTGGCTAATCAGAAAAAGTGGAAAAGGTGTCCAAGATGCAGGTTCTATGTTGAAAAAAAGGATGGATGTTTGCATATTACGTGCAGGTGCAAATTTGAGTTTTGCTATGCTTGCGGTGCAGAATGGACATCTTCTCATGGTGGTTGTCAAAGAAATTAA

Protein sequence

>Msa0180070

MAQQPSSSFLDLDTVDDFYFSVVSDDEIDHNVPVSDDKYAEALQFQETIMASVITSHQNHSSSSSFSPPPLFPCVASSSETVDDELLFNETLMESLVISQNASSSTSPSLLCVVSSSEVVDVDTVVKTEQAKVVTEETDSITVCEICAETKMTDEMFINLSCYHSFCSECVVKQVATKIQDNITNVSCPGLNCKGVLELESCRSLLPKELIDRWNDALCEAFFLAVPKFYCPFKDCSAMMLDENEDGQDIRESECPFCHRLFCARCHVTWHPGVGCEEFQTMNVDERGREDLLVRELANQKKWKRCPRCRFYVEKKDGCLHITCRCKFEFCYACGAEWTSSHGGCQRN*