Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0058440 | sp|Q9SJT9|COPA2_ARATH | 87.324 | 710 | 89 | 1 | 1 | 709 | 1 | 710 | 0.0 | 1336 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0058440 | A0A072VNH5 | 99.577 | 709 | 3 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1476 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0035250 | Msa0058440 | 0.894353 | 2.671177e-75 | -8.615850e-47 |
Msa0054730 | Msa0058440 | 0.820563 | 6.421748e-53 | -8.615850e-47 |
Msa0058440 | Msa0078450 | 0.957814 | 1.088947e-115 | -8.615850e-47 |
Msa0058440 | Msa0106370 | 0.819529 | 1.107411e-52 | -8.615850e-47 |
Msa0058440 | Msa0153000 | 0.819488 | 1.131104e-52 | -8.615850e-47 |
Msa0058440 | Msa0175320 | 0.805097 | 1.573849e-49 | -8.615850e-47 |
Msa0058440 | Msa0180070 | 0.807927 | 3.979846e-50 | -8.615850e-47 |
Msa0058440 | Msa0258220 | 0.803819 | 2.905298e-49 | -8.615850e-47 |
Msa0058440 | Msa0532790 | 0.818709 | 1.701714e-52 | -8.615850e-47 |
Msa0058440 | Msa0616560 | 0.807842 | 4.148236e-50 | -8.615850e-47 |
Msa0058440 | Msa0655990 | 0.815794 | 7.700498e-52 | -8.615850e-47 |
Msa0058440 | Msa0699920 | 0.800700 | 1.274571e-48 | -8.615850e-47 |
Msa0058440 | Msa0747010 | 0.983012 | 1.350818e-156 | -8.615850e-47 |
Msa0058440 | Msa0790110 | 0.802230 | 6.191620e-49 | -8.615850e-47 |
Msa0058440 | Msa0865990 | 0.805070 | 1.594031e-49 | -8.615850e-47 |
Msa0058440 | Msa0996010 | 0.812540 | 4.027567e-51 | -8.615850e-47 |
Msa0058440 | Msa1131350 | 0.819384 | 1.194915e-52 | -8.615850e-47 |
Msa0058440 | Msa1264540 | 0.855319 | 6.834492e-62 | -8.615850e-47 |
Msa0058440 | Msa1410740 | 0.976065 | 4.053635e-141 | -8.615850e-47 |
Msa0058440 | Msa1454910 | 0.808934 | 2.426784e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0058440 | MtrunA17_Chr1g0197551 | 99.577 | 709 | 3 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1476 |
Msa0058440 | MtrunA17_Chr4g0035611 | 90.909 | 715 | 59 | 2 | 1 | 709 | 1 | 715 | 0.0 | 1369 |
Msa0058440 | MtrunA17_Chr4g0004241 | 27.384 | 734 | 433 | 24 | 4 | 692 | 10 | 688 | 8.91e-70 | 245 |
Msa0058440 | MtrunA17_Chr2g0331981 | 26.803 | 735 | 436 | 22 | 4 | 692 | 10 | 688 | 2.36e-66 | 236 |
Msa0058440 | MtrunA17_Chr2g0331961 | 31.962 | 316 | 182 | 6 | 4 | 315 | 12 | 298 | 2.38e-49 | 175 |
Msa0058440 | MtrunA17_Chr2g0331961 | 28.916 | 166 | 114 | 3 | 2 | 163 | 94 | 259 | 4.24e-21 | 94.7 |
Msa0058440 | MtrunA17_Chr1g0185501 | 28.929 | 280 | 174 | 6 | 50 | 308 | 26 | 301 | 1.67e-27 | 113 |
Msa0058440 | MtrunA17_Chr1g0185501 | 27.053 | 207 | 122 | 3 | 80 | 286 | 14 | 191 | 2.03e-13 | 72.0 |
Msa0058440 | MtrunA17_Chr1g0185501 | 23.759 | 282 | 178 | 8 | 1 | 275 | 61 | 312 | 3.96e-13 | 70.9 |
Msa0058440 | MtrunA17_Chr4g0067151 | 26.667 | 300 | 190 | 7 | 37 | 308 | 13 | 310 | 7.17e-27 | 112 |
Msa0058440 | MtrunA17_Chr4g0067151 | 25.887 | 282 | 178 | 7 | 2 | 279 | 71 | 325 | 2.27e-21 | 95.9 |
Msa0058440 | MtrunA17_Chr2g0281451 | 24.286 | 280 | 180 | 4 | 65 | 344 | 30 | 277 | 2.65e-22 | 102 |
Msa0058440 | MtrunA17_Chr2g0281451 | 27.684 | 177 | 122 | 1 | 2 | 172 | 51 | 227 | 5.81e-19 | 92.0 |
Msa0058440 | MtrunA17_Chr2g0281451 | 25.210 | 238 | 147 | 4 | 33 | 269 | 40 | 247 | 3.66e-17 | 86.3 |
Msa0058440 | MtrunA17_Chr6g0448921 | 24.806 | 258 | 165 | 3 | 62 | 319 | 28 | 256 | 3.01e-22 | 102 |
Msa0058440 | MtrunA17_Chr6g0448921 | 26.923 | 156 | 114 | 0 | 9 | 164 | 59 | 214 | 1.16e-19 | 94.0 |
Msa0058440 | MtrunA17_Chr6g0448921 | 25.871 | 201 | 122 | 2 | 33 | 233 | 41 | 214 | 1.71e-15 | 80.5 |
Msa0058440 | MtrunA17_Chr4g0059031 | 25.926 | 270 | 169 | 6 | 74 | 314 | 383 | 650 | 4.91e-20 | 95.5 |
Msa0058440 | MtrunA17_Chr4g0059031 | 23.906 | 297 | 182 | 12 | 31 | 287 | 289 | 581 | 1.02e-15 | 81.6 |
Msa0058440 | MtrunA17_Chr4g0059031 | 26.901 | 171 | 116 | 3 | 3 | 164 | 54 | 224 | 4.19e-13 | 73.2 |
Msa0058440 | MtrunA17_Chr3g0136971 | 26.295 | 251 | 155 | 4 | 3 | 251 | 413 | 635 | 5.84e-19 | 91.7 |
Msa0058440 | MtrunA17_Chr3g0136971 | 24.895 | 237 | 149 | 3 | 47 | 283 | 415 | 622 | 2.26e-16 | 83.2 |
Msa0058440 | MtrunA17_Chr3g0136971 | 25.000 | 188 | 112 | 3 | 129 | 316 | 413 | 571 | 1.07e-14 | 77.8 |
Msa0058440 | MtrunA17_Chr1g0176241 | 25.237 | 317 | 213 | 8 | 10 | 308 | 162 | 472 | 8.95e-18 | 87.0 |
Msa0058440 | MtrunA17_Chr1g0176241 | 26.066 | 211 | 121 | 6 | 82 | 287 | 108 | 288 | 5.65e-15 | 78.2 |
Msa0058440 | MtrunA17_Chr8g0383711 | 25.000 | 276 | 186 | 6 | 17 | 275 | 26 | 297 | 8.04e-17 | 82.0 |
Msa0058440 | MtrunA17_Chr8g0383711 | 22.887 | 284 | 194 | 7 | 50 | 314 | 17 | 294 | 6.64e-13 | 70.1 |
Msa0058440 | MtrunA17_Chr3g0099061 | 25.902 | 305 | 190 | 7 | 4 | 275 | 210 | 511 | 1.66e-16 | 83.2 |
Msa0058440 | MtrunA17_Chr8g0352821 | 26.073 | 303 | 192 | 8 | 24 | 324 | 198 | 470 | 3.92e-16 | 82.8 |
Msa0058440 | MtrunA17_Chr8g0352821 | 23.019 | 265 | 173 | 3 | 66 | 328 | 198 | 433 | 1.48e-14 | 77.4 |
Msa0058440 | MtrunA17_Chr8g0352821 | 21.942 | 278 | 178 | 4 | 23 | 289 | 239 | 488 | 2.51e-14 | 76.6 |
Msa0058440 | MtrunA17_Chr4g0069701 | 23.810 | 273 | 168 | 4 | 19 | 280 | 455 | 698 | 5.14e-16 | 82.4 |
Msa0058440 | MtrunA17_Chr4g0069701 | 28.358 | 134 | 96 | 0 | 31 | 164 | 86 | 219 | 4.09e-13 | 73.2 |
Msa0058440 | MtrunA17_Chr1g0200901 | 23.630 | 292 | 199 | 9 | 3 | 276 | 117 | 402 | 9.34e-16 | 80.1 |
Msa0058440 | MtrunA17_Chr5g0405851 | 23.868 | 243 | 157 | 3 | 1 | 242 | 245 | 460 | 1.02e-15 | 80.5 |
Msa0058440 | MtrunA17_Chr5g0405851 | 23.950 | 238 | 151 | 4 | 41 | 277 | 243 | 451 | 1.03e-14 | 77.4 |
Msa0058440 | MtrunA17_Chr2g0295791 | 21.887 | 265 | 177 | 3 | 12 | 276 | 173 | 407 | 2.01e-15 | 79.7 |
Msa0058440 | MtrunA17_Chr2g0295791 | 23.478 | 230 | 147 | 3 | 91 | 320 | 168 | 368 | 2.30e-14 | 76.3 |
Msa0058440 | MtrunA17_Chr2g0295791 | 26.027 | 146 | 108 | 0 | 11 | 156 | 214 | 359 | 1.87e-11 | 67.0 |
Msa0058440 | MtrunA17_Chr1g0148791 | 26.582 | 237 | 158 | 6 | 58 | 279 | 629 | 864 | 3.13e-15 | 79.7 |
Msa0058440 | MtrunA17_Chr7g0253861 | 24.424 | 217 | 124 | 6 | 22 | 228 | 154 | 340 | 4.69e-15 | 77.4 |
Msa0058440 | MtrunA17_Chr7g0253861 | 22.656 | 256 | 167 | 6 | 24 | 274 | 113 | 342 | 1.04e-11 | 67.0 |
Msa0058440 | MtrunA17_Chr7g0253861 | 24.901 | 253 | 168 | 7 | 50 | 280 | 54 | 306 | 1.20e-11 | 67.0 |
Msa0058440 | MtrunA17_Chr1g0191191 | 21.306 | 291 | 200 | 8 | 66 | 330 | 55 | 342 | 8.76e-15 | 78.2 |
Msa0058440 | MtrunA17_Chr8g0392701 | 32.468 | 154 | 98 | 3 | 31 | 179 | 85 | 237 | 1.43e-14 | 75.5 |
Msa0058440 | MtrunA17_Chr8g0392701 | 26.943 | 193 | 106 | 5 | 89 | 276 | 59 | 221 | 4.16e-12 | 68.2 |
Msa0058440 | MtrunA17_Chr1g0172501 | 22.634 | 243 | 160 | 2 | 1 | 242 | 348 | 563 | 2.65e-14 | 76.3 |
Msa0058440 | MtrunA17_Chr1g0172501 | 23.109 | 238 | 153 | 4 | 41 | 277 | 346 | 554 | 7.98e-12 | 68.6 |
Msa0058440 | MtrunA17_Chr3g0093681 | 25.153 | 163 | 121 | 1 | 1 | 162 | 348 | 510 | 2.94e-14 | 76.3 |
Msa0058440 | MtrunA17_Chr3g0093681 | 25.157 | 159 | 118 | 1 | 9 | 166 | 398 | 556 | 2.12e-12 | 70.5 |
Msa0058440 | MtrunA17_Chr3g0093681 | 23.109 | 238 | 153 | 4 | 41 | 277 | 346 | 554 | 9.25e-12 | 68.2 |
Msa0058440 | MtrunA17_Chr3g0138311 | 25.368 | 272 | 146 | 8 | 58 | 275 | 628 | 896 | 1.18e-13 | 74.7 |
Msa0058440 | MtrunA17_Chr1g0194721 | 25.000 | 312 | 191 | 9 | 8 | 291 | 190 | 486 | 1.32e-13 | 75.1 |
Msa0058440 | MtrunA17_Chr7g0237271 | 23.529 | 272 | 172 | 7 | 54 | 322 | 510 | 748 | 1.96e-13 | 73.9 |
Msa0058440 | MtrunA17_Chr7g0266251 | 22.792 | 351 | 211 | 12 | 2 | 314 | 9 | 337 | 2.08e-13 | 72.4 |
Msa0058440 | MtrunA17_Chr7g0246741 | 21.721 | 244 | 162 | 5 | 74 | 316 | 350 | 565 | 2.73e-13 | 73.6 |
Msa0058440 | MtrunA17_Chr7g0237241 | 23.529 | 272 | 172 | 7 | 54 | 322 | 501 | 739 | 2.82e-13 | 73.6 |
Msa0058440 | MtrunA17_Chr8g0390861 | 21.401 | 257 | 183 | 4 | 24 | 278 | 967 | 1206 | 3.17e-13 | 73.6 |
Msa0058440 | MtrunA17_Chr8g0390861 | 24.454 | 229 | 149 | 8 | 65 | 276 | 883 | 1104 | 8.46e-11 | 65.9 |
Msa0058440 | MtrunA17_Chr2g0285951 | 27.826 | 115 | 83 | 0 | 50 | 164 | 29 | 143 | 9.84e-13 | 69.3 |
Msa0058440 | MtrunA17_Chr1g0171711 | 23.507 | 268 | 169 | 7 | 44 | 308 | 502 | 736 | 4.06e-12 | 69.7 |
Msa0058440 | MtrunA17_Chr2g0294611 | 23.810 | 273 | 173 | 6 | 7 | 256 | 191 | 451 | 3.03e-11 | 67.4 |
Msa0058440 | MtrunA17_Chr5g0396821 | 23.643 | 258 | 183 | 9 | 21 | 274 | 783 | 1030 | 4.07e-11 | 66.6 |
Msa0058440 | MtrunA17_Chr2g0321211 | 24.876 | 201 | 90 | 4 | 66 | 235 | 28 | 198 | 5.99e-11 | 66.2 |
Msa0058440 | MtrunA17_Chr4g0062881 | 24.790 | 238 | 160 | 8 | 54 | 276 | 183 | 416 | 7.36e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0058440 | AT2G21390.1 | 87.324 | 710 | 89 | 1 | 1 | 709 | 1 | 710 | 0.0 | 1336 |
Msa0058440 | AT1G62020.1 | 87.042 | 710 | 91 | 1 | 1 | 709 | 1 | 710 | 0.0 | 1332 |
Msa0058440 | AT3G15980.1 | 27.717 | 736 | 428 | 24 | 4 | 692 | 10 | 688 | 4.42e-72 | 252 |
Msa0058440 | AT3G15980.3 | 27.717 | 736 | 428 | 24 | 4 | 692 | 10 | 688 | 4.79e-72 | 252 |
Msa0058440 | AT3G15980.6 | 27.717 | 736 | 428 | 24 | 4 | 692 | 10 | 688 | 4.79e-72 | 252 |
Msa0058440 | AT3G15980.2 | 27.717 | 736 | 428 | 24 | 4 | 692 | 10 | 688 | 4.79e-72 | 252 |
Msa0058440 | AT3G15980.4 | 27.717 | 736 | 428 | 24 | 4 | 692 | 10 | 688 | 4.79e-72 | 252 |
Msa0058440 | AT3G15980.7 | 27.717 | 736 | 428 | 24 | 4 | 692 | 10 | 688 | 4.80e-72 | 252 |
Msa0058440 | AT1G52360.4 | 27.112 | 734 | 435 | 24 | 4 | 692 | 10 | 688 | 1.13e-69 | 245 |
Msa0058440 | AT1G52360.1 | 27.112 | 734 | 435 | 24 | 4 | 692 | 10 | 688 | 1.13e-69 | 245 |
Msa0058440 | AT1G52360.2 | 27.112 | 734 | 435 | 24 | 4 | 692 | 54 | 732 | 1.21e-69 | 246 |
Msa0058440 | AT1G52360.3 | 27.112 | 734 | 435 | 24 | 4 | 692 | 10 | 688 | 1.74e-69 | 245 |
Msa0058440 | AT3G15980.5 | 27.503 | 749 | 425 | 27 | 4 | 692 | 10 | 700 | 3.82e-69 | 244 |
Msa0058440 | AT1G79990.2 | 27.483 | 735 | 430 | 24 | 4 | 692 | 10 | 687 | 4.88e-69 | 243 |
Msa0058440 | AT1G79990.1 | 27.483 | 735 | 430 | 24 | 4 | 692 | 10 | 687 | 7.84e-69 | 243 |
Msa0058440 | AT3G49660.1 | 27.368 | 285 | 177 | 7 | 50 | 308 | 23 | 303 | 1.02e-27 | 114 |
Msa0058440 | AT3G49660.1 | 29.057 | 265 | 149 | 6 | 44 | 280 | 64 | 317 | 1.39e-24 | 105 |
Msa0058440 | AT3G49660.1 | 29.747 | 158 | 107 | 3 | 9 | 162 | 155 | 312 | 4.92e-16 | 80.1 |
Msa0058440 | AT3G49660.1 | 30.872 | 149 | 79 | 2 | 130 | 278 | 19 | 143 | 1.32e-14 | 75.9 |
Msa0058440 | AT4G02730.1 | 26.408 | 284 | 187 | 7 | 44 | 307 | 36 | 317 | 2.89e-23 | 102 |
Msa0058440 | AT4G02730.1 | 29.952 | 207 | 117 | 3 | 80 | 286 | 30 | 208 | 1.78e-16 | 81.6 |
Msa0058440 | AT4G02730.1 | 25.357 | 280 | 177 | 8 | 1 | 275 | 77 | 329 | 3.00e-14 | 75.1 |
Msa0058440 | AT1G11160.4 | 24.823 | 282 | 182 | 5 | 39 | 319 | 3 | 255 | 1.98e-22 | 103 |
Msa0058440 | AT1G11160.4 | 28.025 | 157 | 113 | 0 | 12 | 168 | 61 | 217 | 2.51e-19 | 93.6 |
Msa0058440 | AT1G11160.4 | 25.385 | 260 | 158 | 5 | 2 | 257 | 8 | 235 | 1.69e-17 | 87.8 |
Msa0058440 | AT1G11160.2 | 24.823 | 282 | 182 | 5 | 39 | 319 | 3 | 255 | 2.19e-22 | 103 |
Msa0058440 | AT1G11160.2 | 28.025 | 157 | 113 | 0 | 12 | 168 | 61 | 217 | 2.60e-19 | 93.6 |
Msa0058440 | AT1G11160.2 | 25.385 | 260 | 158 | 5 | 2 | 257 | 8 | 235 | 1.79e-17 | 87.8 |
Msa0058440 | AT1G11160.1 | 24.823 | 282 | 182 | 5 | 39 | 319 | 3 | 255 | 2.23e-22 | 103 |
Msa0058440 | AT1G11160.1 | 28.025 | 157 | 113 | 0 | 12 | 168 | 61 | 217 | 2.58e-19 | 93.6 |
Msa0058440 | AT1G11160.1 | 25.385 | 260 | 158 | 5 | 2 | 257 | 8 | 235 | 1.67e-17 | 87.8 |
Msa0058440 | AT5G16750.1 | 26.606 | 218 | 137 | 4 | 74 | 287 | 382 | 580 | 2.52e-21 | 99.8 |
Msa0058440 | AT5G16750.1 | 25.543 | 184 | 131 | 2 | 3 | 180 | 54 | 237 | 2.70e-16 | 83.6 |
Msa0058440 | AT5G16750.1 | 23.485 | 264 | 156 | 5 | 65 | 314 | 418 | 649 | 1.96e-15 | 80.9 |
Msa0058440 | AT5G08390.1 | 24.419 | 258 | 166 | 3 | 62 | 319 | 28 | 256 | 5.77e-21 | 98.6 |
Msa0058440 | AT5G08390.1 | 26.282 | 156 | 115 | 0 | 9 | 164 | 59 | 214 | 1.27e-17 | 87.8 |
Msa0058440 | AT5G08390.1 | 23.894 | 226 | 141 | 3 | 33 | 257 | 41 | 236 | 3.84e-13 | 73.6 |
Msa0058440 | AT5G23430.3 | 24.031 | 258 | 167 | 3 | 62 | 319 | 28 | 256 | 1.24e-20 | 97.4 |
Msa0058440 | AT5G23430.3 | 25.000 | 180 | 134 | 1 | 9 | 187 | 59 | 238 | 1.67e-17 | 87.4 |
Msa0058440 | AT5G23430.2 | 24.031 | 258 | 167 | 3 | 62 | 319 | 28 | 256 | 1.24e-20 | 97.4 |
Msa0058440 | AT5G23430.2 | 25.000 | 180 | 134 | 1 | 9 | 187 | 59 | 238 | 1.67e-17 | 87.4 |
Msa0058440 | AT5G23430.1 | 24.031 | 258 | 167 | 3 | 62 | 319 | 28 | 256 | 1.28e-20 | 97.4 |
Msa0058440 | AT5G23430.1 | 25.000 | 180 | 134 | 1 | 9 | 187 | 59 | 238 | 1.66e-17 | 87.4 |
Msa0058440 | AT1G61210.3 | 24.286 | 280 | 180 | 5 | 65 | 344 | 30 | 277 | 4.59e-20 | 95.9 |
Msa0058440 | AT1G61210.3 | 27.461 | 193 | 136 | 2 | 9 | 197 | 58 | 250 | 2.75e-18 | 90.5 |
Msa0058440 | AT1G61210.3 | 23.894 | 226 | 141 | 3 | 33 | 257 | 40 | 235 | 5.04e-15 | 79.7 |
Msa0058440 | AT1G61210.3 | 22.764 | 123 | 94 | 1 | 5 | 127 | 138 | 259 | 5.74e-11 | 66.6 |
Msa0058440 | AT1G61210.1 | 24.286 | 280 | 180 | 5 | 65 | 344 | 30 | 277 | 9.95e-20 | 95.1 |
Msa0058440 | AT1G61210.1 | 27.895 | 190 | 133 | 2 | 12 | 197 | 61 | 250 | 4.81e-18 | 89.7 |
Msa0058440 | AT1G61210.1 | 23.894 | 226 | 141 | 3 | 33 | 257 | 40 | 235 | 7.89e-15 | 79.3 |
Msa0058440 | AT1G61210.1 | 23.529 | 119 | 90 | 1 | 9 | 127 | 142 | 259 | 7.97e-11 | 66.2 |
Msa0058440 | AT1G61210.2 | 24.286 | 280 | 180 | 5 | 65 | 344 | 30 | 277 | 1.01e-19 | 95.1 |
Msa0058440 | AT1G61210.2 | 27.895 | 190 | 133 | 2 | 12 | 197 | 61 | 250 | 4.89e-18 | 89.7 |
Msa0058440 | AT1G61210.2 | 23.894 | 226 | 141 | 3 | 33 | 257 | 40 | 235 | 8.16e-15 | 79.3 |
Msa0058440 | AT1G61210.2 | 23.529 | 119 | 90 | 1 | 9 | 127 | 142 | 259 | 8.17e-11 | 66.2 |
Msa0058440 | AT1G11160.3 | 28.025 | 157 | 113 | 0 | 12 | 168 | 19 | 175 | 2.60e-19 | 93.6 |
Msa0058440 | AT1G11160.3 | 25.359 | 209 | 125 | 3 | 50 | 257 | 15 | 193 | 5.43e-17 | 86.3 |
Msa0058440 | AT1G11160.3 | 24.681 | 235 | 148 | 4 | 85 | 319 | 8 | 213 | 2.02e-16 | 84.3 |
Msa0058440 | AT1G11160.3 | 24.138 | 116 | 87 | 1 | 12 | 127 | 103 | 217 | 6.53e-11 | 66.6 |
Msa0058440 | AT5G13480.2 | 26.557 | 305 | 188 | 8 | 24 | 324 | 149 | 421 | 1.51e-18 | 90.5 |
Msa0058440 | AT5G13480.3 | 26.557 | 305 | 188 | 8 | 24 | 324 | 126 | 398 | 2.41e-18 | 89.7 |
Msa0058440 | AT5G13480.4 | 26.557 | 305 | 188 | 8 | 24 | 324 | 126 | 398 | 2.62e-18 | 89.7 |
Msa0058440 | AT5G13480.1 | 26.557 | 305 | 188 | 8 | 24 | 324 | 138 | 410 | 2.85e-18 | 89.7 |
Msa0058440 | AT3G16650.1 | 27.727 | 220 | 129 | 4 | 50 | 269 | 169 | 358 | 3.84e-18 | 88.6 |
Msa0058440 | AT3G16650.1 | 27.451 | 153 | 110 | 1 | 12 | 164 | 173 | 324 | 2.71e-15 | 79.7 |
Msa0058440 | AT3G16650.1 | 25.654 | 191 | 109 | 4 | 130 | 318 | 165 | 324 | 1.23e-13 | 74.3 |
Msa0058440 | AT3G16650.1 | 22.414 | 232 | 150 | 2 | 89 | 320 | 166 | 367 | 4.34e-11 | 66.2 |
Msa0058440 | AT1G15440.1 | 24.068 | 295 | 193 | 8 | 74 | 348 | 370 | 653 | 4.35e-17 | 86.3 |
Msa0058440 | AT1G15440.2 | 24.068 | 295 | 193 | 8 | 74 | 348 | 330 | 613 | 4.64e-17 | 86.3 |
Msa0058440 | AT5G64730.1 | 24.643 | 280 | 182 | 7 | 17 | 275 | 26 | 297 | 5.42e-17 | 82.8 |
Msa0058440 | AT1G73720.1 | 26.606 | 327 | 202 | 10 | 4 | 317 | 209 | 510 | 1.31e-16 | 84.0 |
Msa0058440 | AT4G15900.1 | 22.642 | 265 | 175 | 3 | 12 | 276 | 179 | 413 | 3.15e-16 | 82.4 |
Msa0058440 | AT4G15900.1 | 24.569 | 232 | 146 | 4 | 89 | 320 | 172 | 374 | 2.95e-14 | 76.3 |
Msa0058440 | AT4G15900.1 | 26.000 | 150 | 111 | 0 | 11 | 160 | 220 | 369 | 1.44e-12 | 71.2 |
Msa0058440 | AT4G11110.1 | 27.308 | 260 | 171 | 10 | 21 | 274 | 785 | 1032 | 4.08e-16 | 83.2 |
Msa0058440 | AT3G18140.1 | 22.605 | 261 | 164 | 6 | 5 | 257 | 74 | 304 | 1.18e-15 | 79.0 |
Msa0058440 | AT5G25150.1 | 25.397 | 252 | 140 | 6 | 66 | 316 | 366 | 570 | 1.33e-15 | 81.3 |
Msa0058440 | AT5G25150.1 | 23.361 | 244 | 159 | 3 | 9 | 251 | 418 | 634 | 1.71e-15 | 80.9 |
Msa0058440 | AT5G25150.1 | 23.504 | 234 | 150 | 3 | 50 | 283 | 417 | 621 | 2.33e-15 | 80.5 |
Msa0058440 | AT5G25150.1 | 25.664 | 226 | 137 | 4 | 84 | 308 | 409 | 604 | 1.28e-13 | 74.7 |
Msa0058440 | AT5G25150.2 | 26.341 | 205 | 119 | 4 | 112 | 316 | 398 | 570 | 1.63e-15 | 80.9 |
Msa0058440 | AT5G25150.2 | 23.361 | 244 | 159 | 3 | 9 | 251 | 418 | 634 | 1.90e-15 | 80.9 |
Msa0058440 | AT5G25150.2 | 23.504 | 234 | 150 | 3 | 50 | 283 | 417 | 621 | 2.83e-15 | 80.1 |
Msa0058440 | AT5G25150.2 | 24.889 | 225 | 140 | 3 | 84 | 308 | 409 | 604 | 1.47e-13 | 74.7 |
Msa0058440 | AT3G21540.1 | 29.104 | 134 | 95 | 0 | 31 | 164 | 86 | 219 | 2.61e-15 | 80.5 |
Msa0058440 | AT3G21540.1 | 22.545 | 275 | 169 | 5 | 19 | 280 | 455 | 698 | 7.36e-12 | 69.3 |
Msa0058440 | AT3G05090.2 | 23.420 | 269 | 182 | 7 | 61 | 308 | 50 | 315 | 2.65e-15 | 80.5 |
Msa0058440 | AT3G05090.3 | 23.420 | 269 | 182 | 7 | 61 | 308 | 50 | 315 | 2.65e-15 | 80.5 |
Msa0058440 | AT3G05090.1 | 23.420 | 269 | 182 | 7 | 61 | 308 | 50 | 315 | 2.65e-15 | 80.5 |
Msa0058440 | AT5G52820.1 | 24.444 | 315 | 218 | 9 | 10 | 308 | 152 | 462 | 2.86e-15 | 79.3 |
Msa0058440 | AT1G18080.1 | 32.258 | 155 | 98 | 3 | 31 | 179 | 85 | 238 | 5.00e-15 | 77.4 |
Msa0058440 | AT1G18080.1 | 25.000 | 236 | 146 | 6 | 89 | 321 | 59 | 266 | 1.04e-11 | 67.4 |
Msa0058440 | AT1G48630.1 | 31.169 | 154 | 100 | 3 | 31 | 179 | 85 | 237 | 1.15e-14 | 76.3 |
Msa0058440 | AT1G48630.1 | 23.810 | 273 | 168 | 7 | 24 | 287 | 31 | 272 | 1.76e-12 | 69.7 |
Msa0058440 | AT3G18130.1 | 30.625 | 160 | 105 | 3 | 25 | 179 | 79 | 237 | 1.46e-14 | 75.9 |
Msa0058440 | AT3G18130.1 | 23.529 | 255 | 160 | 6 | 37 | 287 | 49 | 272 | 8.64e-12 | 67.4 |
Msa0058440 | AT2G41500.1 | 22.267 | 247 | 162 | 3 | 1 | 244 | 331 | 550 | 4.97e-14 | 75.9 |
Msa0058440 | AT2G41500.2 | 22.267 | 247 | 162 | 3 | 1 | 244 | 331 | 550 | 4.97e-14 | 75.9 |
Msa0058440 | AT2G43770.1 | 25.229 | 218 | 121 | 7 | 22 | 228 | 152 | 338 | 9.08e-14 | 73.9 |
Msa0058440 | AT2G43770.1 | 22.441 | 254 | 166 | 6 | 24 | 272 | 111 | 338 | 2.72e-12 | 69.3 |
Msa0058440 | AT2G43770.1 | 24.419 | 258 | 169 | 8 | 50 | 283 | 52 | 307 | 1.65e-11 | 67.0 |
Msa0058440 | AT2G47410.6 | 25.092 | 271 | 174 | 6 | 9 | 256 | 3 | 267 | 3.32e-13 | 73.9 |
Msa0058440 | AT2G47410.3 | 25.092 | 271 | 174 | 6 | 9 | 256 | 3 | 267 | 3.32e-13 | 73.9 |
Msa0058440 | AT1G49040.1 | 21.132 | 265 | 166 | 7 | 24 | 278 | 953 | 1184 | 4.90e-13 | 73.6 |
Msa0058440 | AT2G47410.5 | 25.092 | 271 | 174 | 6 | 9 | 256 | 185 | 449 | 5.17e-13 | 73.6 |
Msa0058440 | AT2G26060.1 | 25.000 | 356 | 199 | 15 | 2 | 314 | 13 | 343 | 7.39e-13 | 71.2 |
Msa0058440 | AT2G47410.4 | 24.719 | 267 | 170 | 6 | 9 | 256 | 3 | 257 | 1.01e-12 | 72.4 |
Msa0058440 | AT2G26060.2 | 25.574 | 305 | 170 | 13 | 2 | 274 | 13 | 292 | 1.11e-12 | 70.5 |
Msa0058440 | AT2G47410.2 | 24.719 | 267 | 170 | 6 | 9 | 256 | 184 | 438 | 1.54e-12 | 72.0 |
Msa0058440 | AT2G47410.1 | 24.719 | 267 | 170 | 6 | 9 | 256 | 185 | 439 | 1.54e-12 | 72.0 |
Msa0058440 | AT3G44530.2 | 27.861 | 201 | 84 | 6 | 66 | 235 | 28 | 198 | 3.98e-12 | 70.5 |
Msa0058440 | AT3G44530.1 | 27.861 | 201 | 84 | 6 | 66 | 235 | 28 | 198 | 4.62e-12 | 70.1 |
Msa0058440 | AT2G32700.2 | 23.529 | 238 | 147 | 5 | 65 | 300 | 524 | 728 | 4.72e-12 | 70.1 |
Msa0058440 | AT2G32700.5 | 23.529 | 238 | 147 | 5 | 65 | 300 | 524 | 728 | 4.72e-12 | 70.1 |
Msa0058440 | AT2G32700.1 | 23.529 | 238 | 147 | 5 | 65 | 300 | 524 | 728 | 4.72e-12 | 70.1 |
Msa0058440 | AT2G32700.4 | 23.529 | 238 | 147 | 5 | 65 | 300 | 524 | 728 | 4.72e-12 | 70.1 |
Msa0058440 | AT2G32700.3 | 23.529 | 238 | 147 | 5 | 65 | 300 | 524 | 728 | 4.72e-12 | 70.1 |
Msa0058440 | AT2G32700.6 | 23.529 | 238 | 147 | 5 | 65 | 300 | 522 | 726 | 5.05e-12 | 70.1 |
Msa0058440 | AT2G32700.7 | 23.529 | 238 | 147 | 5 | 65 | 300 | 543 | 747 | 5.25e-12 | 69.7 |
Msa0058440 | AT4G32551.2 | 24.473 | 237 | 163 | 8 | 58 | 279 | 696 | 931 | 7.09e-12 | 69.7 |
Msa0058440 | AT4G32990.2 | 30.380 | 158 | 104 | 3 | 131 | 282 | 16 | 173 | 7.95e-12 | 67.0 |
Msa0058440 | AT4G32551.1 | 24.473 | 237 | 163 | 8 | 58 | 279 | 658 | 893 | 8.49e-12 | 69.3 |
Msa0058440 | AT4G32990.1 | 30.380 | 158 | 104 | 3 | 131 | 282 | 16 | 173 | 1.61e-11 | 66.6 |
Msa0058440 | AT2G33340.3 | 25.108 | 231 | 138 | 6 | 61 | 286 | 232 | 432 | 1.87e-11 | 67.4 |
Msa0058440 | AT2G33340.2 | 25.108 | 231 | 138 | 6 | 61 | 286 | 232 | 432 | 1.93e-11 | 67.8 |
Msa0058440 | AT2G33340.1 | 25.108 | 231 | 138 | 6 | 61 | 286 | 232 | 432 | 1.93e-11 | 67.8 |
Msa0058440 | AT2G46340.1 | 25.980 | 204 | 144 | 7 | 23 | 222 | 780 | 980 | 2.69e-11 | 67.8 |
Msa0058440 | AT2G46340.2 | 25.980 | 204 | 144 | 7 | 23 | 222 | 780 | 980 | 2.69e-11 | 67.8 |
Msa0058440 | AT1G71840.1 | 21.959 | 296 | 197 | 6 | 10 | 279 | 114 | 401 | 3.02e-11 | 66.6 |
Msa0058440 | AT1G71840.1 | 20.266 | 301 | 193 | 6 | 45 | 327 | 54 | 325 | 4.04e-11 | 66.2 |
Msa0058440 | AT5G60940.2 | 22.137 | 262 | 171 | 9 | 1 | 232 | 76 | 334 | 3.14e-11 | 65.9 |
Msa0058440 | AT3G18860.2 | 27.711 | 249 | 146 | 11 | 50 | 275 | 19 | 256 | 3.67e-11 | 67.0 |
Msa0058440 | AT3G18860.1 | 27.711 | 249 | 146 | 11 | 50 | 275 | 19 | 256 | 3.74e-11 | 67.0 |
Msa0058440 | AT5G60940.1 | 22.137 | 262 | 171 | 9 | 1 | 232 | 168 | 426 | 4.49e-11 | 66.2 |
Msa0058440 | AT4G29830.1 | 24.345 | 267 | 168 | 7 | 65 | 300 | 32 | 295 | 8.36e-11 | 64.3 |
Find 341 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTACTTGGATCAAATTTA+TGG | 0.155577 | 1_2:+14848645 | Msa0058440:three_prime_UTR |
GTCATGATCGCGGGGTTAAT+TGG | 0.169053 | 1_2:+14844744 | Msa0058440:CDS |
TGGAGATGTTACTGCAATTT+TGG | 0.171011 | 1_2:+14847310 | Msa0058440:three_prime_UTR |
GAAGTGATTGGCCCCTTCTT+AGG | 0.183792 | 1_2:+14847162 | Msa0058440:three_prime_UTR |
GTTTCACAATGCCTTGTATA+TGG | 0.194998 | 1_2:+14846950 | Msa0058440:three_prime_UTR |
TGGATCAAATTTATGGTTAT+AGG | 0.211652 | 1_2:+14848652 | Msa0058440:three_prime_UTR |
TGCCTTCCCAATGGAGATAA+TGG | 0.218548 | 1_2:+14846409 | Msa0058440:CDS |
GAAACCTTTGTGATATAAAT+TGG | 0.228196 | 1_2:-14846454 | None:intergenic |
AATGGTGATGTGTGTGATTT+GGG | 0.243520 | 1_2:-14844012 | None:intergenic |
GTTCGTCGAATTTGTCAATT+AGG | 0.253137 | 1_2:-14844174 | None:intergenic |
AGGTGATGATTACAAGATTA+AGG | 0.256980 | 1_2:+14844346 | Msa0058440:intron |
ACGATTTCTGCGTCCATATA+TGG | 0.263429 | 1_2:-14847481 | None:intergenic |
GCGAGGATCCATGGACGTTT+AGG | 0.269888 | 1_2:-14844103 | None:intergenic |
GAAAATATTAACTGAACAAT+AGG | 0.272153 | 1_2:-14848473 | None:intergenic |
CAGTGGCGTCATTCAGCTTT+GGG | 0.272430 | 1_2:+14844135 | Msa0058440:CDS |
GATGTGTGTGATTTGGGATT+AGG | 0.273420 | 1_2:-14844006 | None:intergenic |
CATCCGCAGCAGAGACAATA+AGG | 0.277689 | 1_2:-14844790 | None:intergenic |
GCAAGCTCCTGCTGTCTTAC+TGG | 0.279120 | 1_2:-14847965 | None:intergenic |
CTTCTTGCTGGCTATTATAA+TGG | 0.281783 | 1_2:-14846284 | None:intergenic |
GCCGAGAGCATGATAGGTTT+TGG | 0.285469 | 1_2:+14845612 | Msa0058440:CDS |
TCAAGAACGTGTCAAGGTTT+TGG | 0.288011 | 1_2:+14846980 | Msa0058440:three_prime_UTR |
GTGATTTGGGATTAGGGTTA+TGG | 0.291595 | 1_2:-14843999 | None:intergenic |
TTACTGGCATGCCAGTAGTT+GGG | 0.292790 | 1_2:-14847457 | None:intergenic |
GCCGCTAACAGATTCATTTC+AGG | 0.293456 | 1_2:-14845650 | None:intergenic |
ACTGTTCGCGTTTGGGATAT+TGG | 0.294582 | 1_2:+14844611 | Msa0058440:CDS |
ATGTGTGTGATTTGGGATTA+GGG | 0.296495 | 1_2:-14844005 | None:intergenic |
GTTGTAGGTGCCGATGCTTC+TGG | 0.296819 | 1_2:+14848349 | Msa0058440:three_prime_UTR |
TGGATCAGACTGTTCGCGTT+TGG | 0.296859 | 1_2:+14844603 | Msa0058440:CDS |
GGTACGCTGATTGAGCTATA+TGG | 0.304810 | 1_2:+14848393 | Msa0058440:three_prime_UTR |
AGACACAACAAGATCATCTT+TGG | 0.307346 | 1_2:-14844573 | None:intergenic |
AATAAATCAATTTCGTATCT+TGG | 0.309544 | 1_2:+14848589 | Msa0058440:three_prime_UTR |
AGGTGTTTGTTTACTTTGTT+AGG | 0.314444 | 1_2:+14844389 | Msa0058440:CDS |
GGATCAGACTGTTCGCGTTT+GGG | 0.316696 | 1_2:+14844604 | Msa0058440:CDS |
CTGTCTTTGTTGCTCGTAAT+CGG | 0.317323 | 1_2:+14846002 | Msa0058440:CDS |
TCCTTTCAAGTTGTCTCAGC+TGG | 0.326439 | 1_2:+14847733 | Msa0058440:three_prime_UTR |
ATGATAGGCAAGTTAAGATT+TGG | 0.329967 | 1_2:+14844810 | Msa0058440:CDS |
TATACAAGGCATTGTGAAAC+TGG | 0.330764 | 1_2:-14846947 | None:intergenic |
TGCGTCCATATATGGCTTAC+TGG | 0.332468 | 1_2:-14847473 | None:intergenic |
GGGCTATAGGAAAGAGTCTT+TGG | 0.333892 | 1_2:-14845854 | None:intergenic |
CTTCAGCAAAGGATTGTTCT+TGG | 0.336392 | 1_2:+14846184 | Msa0058440:CDS |
GTCTTTCTTTATCTTGTAAC+CGG | 0.338006 | 1_2:+14846864 | Msa0058440:exon |
TTCTGAGAACCCTCCTCTTC+GGG | 0.340726 | 1_2:-14843905 | None:intergenic |
CATAGTCAAAGAGTATGTTT+TGG | 0.344903 | 1_2:+14847901 | Msa0058440:three_prime_UTR |
ACGAGGCTCCTGATGGCGAC+TGG | 0.345022 | 1_2:+14847252 | Msa0058440:three_prime_UTR |
CGAAAGCTTCTCCAAGTTGC+CGG | 0.346062 | 1_2:-14846883 | None:intergenic |
GCATGCCAGTAAGCCATATA+TGG | 0.351671 | 1_2:+14847468 | Msa0058440:three_prime_UTR |
CGAGGATCCATGGACGTTTA+GGG | 0.351997 | 1_2:-14844102 | None:intergenic |
CATTCCGCCGAGAGCATGAT+AGG | 0.353857 | 1_2:+14845606 | Msa0058440:CDS |
TTCAATTTGGCTATAGAAAG+TGG | 0.354206 | 1_2:+14846700 | Msa0058440:CDS |
GAACAGGCAACTTACTTTGT+AGG | 0.355867 | 1_2:+14846134 | Msa0058440:CDS |
ACAGTGGCGTCATTCAGCTT+TGG | 0.366042 | 1_2:+14844134 | Msa0058440:CDS |
TTGGTGCACAAGCTTCTTGC+TGG | 0.366664 | 1_2:-14846296 | None:intergenic |
TGTTGTCTGGTCTAATGATA+TGG | 0.368499 | 1_2:+14846234 | Msa0058440:CDS |
CCAGACAACATATTTGATAA+AGG | 0.369309 | 1_2:-14846221 | None:intergenic |
TAATGGTGATGTGTGTGATT+TGG | 0.369666 | 1_2:-14844013 | None:intergenic |
AACACGACGGTCCCGTTCGC+GGG | 0.371966 | 1_2:+14844194 | Msa0058440:CDS |
GTCTGTGATATTTCAGTTGT+AGG | 0.376224 | 1_2:+14848334 | Msa0058440:three_prime_UTR |
AAGATAAAAGTATTCGCATA+TGG | 0.378822 | 1_2:+14845555 | Msa0058440:CDS |
CGCAGATAACAAATGGGTTT+CGG | 0.381412 | 1_2:-14848213 | None:intergenic |
GCCTTCCCAATGGAGATAAT+GGG | 0.381490 | 1_2:+14846410 | Msa0058440:CDS |
GCGGCAGAGCATGCAGCGGC+TGG | 0.383704 | 1_2:+14847509 | Msa0058440:three_prime_UTR |
ATGTTTCTTGATCTTCATAC+TGG | 0.384370 | 1_2:+14847602 | Msa0058440:three_prime_UTR |
ATGATCAAACCATTCGAATC+TGG | 0.384961 | 1_2:+14844477 | Msa0058440:CDS |
CACAAAACGTGAAGTACAAT+AGG | 0.384976 | 1_2:-14848284 | None:intergenic |
AAGAGCCTCGGTGAATTTCC+CGG | 0.386232 | 1_2:-14847792 | None:intergenic |
TATAATCCCATTATCTCCAT+TGG | 0.388538 | 1_2:-14846416 | None:intergenic |
CTTGCCTTGCTGTCTTCGCT+TGG | 0.389584 | 1_2:-14848135 | None:intergenic |
TTGTCTCTGCTGCGGATGAT+AGG | 0.389615 | 1_2:+14844795 | Msa0058440:CDS |
CTTCTGAGAACCCTCCTCTT+CGG | 0.394926 | 1_2:-14843906 | None:intergenic |
CACAAAATGCAGGGCAACCT+CGG | 0.397441 | 1_2:-14846659 | None:intergenic |
ATCAAGAAACATGGATTTCA+AGG | 0.399089 | 1_2:-14847591 | None:intergenic |
CAGACAACATATTTGATAAA+GGG | 0.399219 | 1_2:-14846220 | None:intergenic |
TTTCACTCACTGCAACCTTC+AGG | 0.401536 | 1_2:+14847994 | Msa0058440:three_prime_UTR |
AAAGAACCCGGTCGTCGAAA+TGG | 0.403118 | 1_2:-14845815 | None:intergenic |
TGACACAATGATATCCTGTT+TGG | 0.407112 | 1_2:-14845525 | None:intergenic |
ACCCTTCACTCTGTTACTCT+TGG | 0.408012 | 1_2:-14844068 | None:intergenic |
TCTCAACCTCTCTTCGTCTC+TGG | 0.408030 | 1_2:+14844232 | Msa0058440:CDS |
TACTGGCATGCCAGTAGTTG+GGG | 0.409452 | 1_2:-14847456 | None:intergenic |
AAGTGATTGGCCCCTTCTTA+GGG | 0.409918 | 1_2:+14847163 | Msa0058440:three_prime_UTR |
TGCTGTTGTTAAGTATGTTT+TGG | 0.413230 | 1_2:+14844718 | Msa0058440:CDS |
ACATATCATACTTGTTCAAT+CGG | 0.414015 | 1_2:+14848716 | Msa0058440:three_prime_UTR |
TCATGATCGCGGGGTTAATT+GGG | 0.415738 | 1_2:+14844745 | Msa0058440:CDS |
CTTACTGGCATGCCAGTAGT+TGG | 0.417299 | 1_2:-14847458 | None:intergenic |
CCTTTATCAAATATGTTGTC+TGG | 0.418226 | 1_2:+14846221 | Msa0058440:CDS |
ACATCTTCGAGAGAGGTTAA+TGG | 0.419971 | 1_2:-14844030 | None:intergenic |
GTTATGCAAGGCATGTTTGA+TGG | 0.420278 | 1_2:+14847185 | Msa0058440:three_prime_UTR |
CAGTACAAAGCTGCCCCTCC+TGG | 0.420741 | 1_2:-14848312 | None:intergenic |
TCCTCACCCCAGTCGCCATC+AGG | 0.421144 | 1_2:-14847260 | None:intergenic |
TATAGCTCAATCAGCGTACC+TGG | 0.423241 | 1_2:-14848390 | None:intergenic |
CGAGGCTCCTGATGGCGACT+GGG | 0.425349 | 1_2:+14847253 | Msa0058440:three_prime_UTR |
TCAACTGCAAGTGATATGAT+TGG | 0.427482 | 1_2:-14847659 | None:intergenic |
GCTATATTCTATGCAGGAAC+AGG | 0.428974 | 1_2:+14846118 | Msa0058440:CDS |
TCCTTCTGTCCTCGATAGAT+TGG | 0.429271 | 1_2:-14848250 | None:intergenic |
ATGATTACAAGATTAAGGTT+TGG | 0.430375 | 1_2:+14844351 | Msa0058440:CDS |
TTTCACAATGCCTTGTATAT+GGG | 0.435854 | 1_2:+14846951 | Msa0058440:three_prime_UTR |
GTTAAGATTTGGAGGATGAA+TGG | 0.438263 | 1_2:+14844821 | Msa0058440:CDS |
CAATTGATGAGAAAGATTAC+TGG | 0.439169 | 1_2:+14846755 | Msa0058440:CDS |
TTCGTCGAATTTGTCAATTA+GGG | 0.440246 | 1_2:-14844173 | None:intergenic |
TGATATAAATTGGAACATCC+AGG | 0.442273 | 1_2:-14846444 | None:intergenic |
ACAAAACGTGAAGTACAATA+GGG | 0.443749 | 1_2:-14848283 | None:intergenic |
TCCTGATGGCGACTGGGGTG+AGG | 0.444082 | 1_2:+14847259 | Msa0058440:three_prime_UTR |
AATATAGCATCAGTGGCAAT+TGG | 0.445468 | 1_2:-14846103 | None:intergenic |
TGAAAATGAACCCCGCGAAC+GGG | 0.445544 | 1_2:-14844205 | None:intergenic |
ACAAAATGCAGGGCAACCTC+GGG | 0.446155 | 1_2:-14846658 | None:intergenic |
TTTCATCTTTCACAAAATGC+AGG | 0.449007 | 1_2:-14846669 | None:intergenic |
GTTGCACCGCAGATAACAAA+TGG | 0.449064 | 1_2:-14848220 | None:intergenic |
GACAACTTGAAAGGAAGTGC+TGG | 0.449380 | 1_2:-14847725 | None:intergenic |
TATGTTGCTGCGTCAGTGCA+TGG | 0.450149 | 1_2:+14847029 | Msa0058440:three_prime_UTR |
ACTGCTCTGTTCACCTTCCC+AGG | 0.452982 | 1_2:+14848372 | Msa0058440:three_prime_UTR |
TGTGTGCCAACAGAAGCTTT+TGG | 0.454710 | 1_2:-14847416 | None:intergenic |
TGCAATGGTAACCTGCTTCA+AGG | 0.458581 | 1_2:+14848045 | Msa0058440:three_prime_UTR |
TCATACAATTCCTTTGATTG+TGG | 0.459919 | 1_2:+14847835 | Msa0058440:three_prime_UTR |
TCTTGTTGTGTCTGCGTCGT+TGG | 0.460881 | 1_2:+14844583 | Msa0058440:CDS |
ATTCATAGAAACACAAGAAC+CGG | 0.461437 | 1_2:-14845763 | None:intergenic |
CACTTGCAGTTGAAAGAGGT+TGG | 0.462470 | 1_2:+14847669 | Msa0058440:three_prime_UTR |
ACTTTGTAGGTCAGAGGATA+GGG | 0.463323 | 1_2:+14846147 | Msa0058440:CDS |
GAACACGACGGTCCCGTTCG+CGG | 0.464333 | 1_2:+14844193 | Msa0058440:CDS |
TGCATATCAAAGGACGGTTA+TGG | 0.464988 | 1_2:+14845935 | Msa0058440:CDS |
AAACGGCTTGCAGCTGAACT+AGG | 0.466008 | 1_2:+14847068 | Msa0058440:three_prime_UTR |
CATGATGAAATTGAACGGTT+CGG | 0.466638 | 1_2:-14844427 | None:intergenic |
GTGAAAATGAACCCCGCGAA+CGG | 0.468162 | 1_2:-14844206 | None:intergenic |
AAAATATTAACTGAACAATA+GGG | 0.468415 | 1_2:-14848472 | None:intergenic |
TACAATTCCTTTGATTGTGG+TGG | 0.472282 | 1_2:+14847838 | Msa0058440:three_prime_UTR |
GAGATGGAGGATTTAGAGTT+GGG | 0.475727 | 1_2:+14847377 | Msa0058440:three_prime_UTR |
CATATCATACTTGTTCAATC+GGG | 0.476870 | 1_2:+14848717 | Msa0058440:three_prime_UTR |
GAAGACAGCAAGGCAAGTGC+TGG | 0.478624 | 1_2:+14848141 | Msa0058440:three_prime_UTR |
CGGGTTTGACAATACAGGTC+GGG | 0.479027 | 1_2:+14847208 | Msa0058440:three_prime_UTR |
GGTTATAAGTTCTTTACTGC+CGG | 0.479656 | 1_2:+14847773 | Msa0058440:three_prime_UTR |
AAGGTTCTTTGCCTTGAAGC+AGG | 0.480451 | 1_2:-14848056 | None:intergenic |
AAGGCAAGTGCTGGCAGCCG+CGG | 0.480513 | 1_2:+14848150 | Msa0058440:three_prime_UTR |
AGATGAAAATGCACGCAGAT+AGG | 0.484156 | 1_2:-14847633 | None:intergenic |
ACTTTCCCCTCAGGCAAAGA+TGG | 0.485100 | 1_2:-14847101 | None:intergenic |
AAACCATTCGAATCTGGAAC+TGG | 0.485166 | 1_2:+14844483 | Msa0058440:CDS |
AGACCCGCCTTTGTGGTTAG+TGG | 0.486012 | 1_2:+14845716 | Msa0058440:CDS |
TACTTTGTAGGTCAGAGGAT+AGG | 0.487575 | 1_2:+14846146 | Msa0058440:CDS |
AGATACAAAGGCATGGGAAG+TGG | 0.489697 | 1_2:+14845454 | Msa0058440:intron |
ACCATGTTATGAACATGATA+AGG | 0.490320 | 1_2:+14846581 | Msa0058440:CDS |
GACACAACAAGATCATCTTT+GGG | 0.491048 | 1_2:-14844572 | None:intergenic |
TGAAGAAGGTGGATGGGAGA+TGG | 0.491083 | 1_2:+14847361 | Msa0058440:three_prime_UTR |
ATATCACTTGCAGTTGAAAG+AGG | 0.491792 | 1_2:+14847665 | Msa0058440:three_prime_UTR |
CTTTGATTGTGGTGGAGTCA+AGG | 0.492390 | 1_2:+14847846 | Msa0058440:three_prime_UTR |
ATAATCCCATTATCTCCATT+GGG | 0.492424 | 1_2:-14846415 | None:intergenic |
GTACGCTGATTGAGCTATAT+GGG | 0.496485 | 1_2:+14848394 | Msa0058440:three_prime_UTR |
AGAAAGTGAAAGGTTGTACT+TGG | 0.497166 | 1_2:+14848632 | Msa0058440:three_prime_UTR |
CAGCTTTGGGATTACCGTAT+GGG | 0.497527 | 1_2:+14844148 | Msa0058440:CDS |
GACCCGCCTTTGTGGTTAGT+GGG | 0.500496 | 1_2:+14845717 | Msa0058440:CDS |
GGGATATTGGATCGTTGAAA+AGG | 0.500627 | 1_2:+14844624 | Msa0058440:CDS |
GGTGGAGTCAAGGAGGGAAG+TGG | 0.502088 | 1_2:+14847856 | Msa0058440:three_prime_UTR |
TGCAAGGCATGTTTGATGGC+GGG | 0.502682 | 1_2:+14847189 | Msa0058440:three_prime_UTR |
ATAGTTGATGTAGATGCAAA+TGG | 0.503715 | 1_2:+14847290 | Msa0058440:three_prime_UTR |
GGAGATGGAGGATTTAGAGT+TGG | 0.503964 | 1_2:+14847376 | Msa0058440:three_prime_UTR |
TTCATACACAAGAAAGTGAA+AGG | 0.504851 | 1_2:+14848622 | Msa0058440:three_prime_UTR |
CCCCTTCTTAGGGTTATGCA+AGG | 0.506969 | 1_2:+14847173 | Msa0058440:three_prime_UTR |
TTATCTTGTAACCGGCAACT+TGG | 0.508467 | 1_2:+14846872 | Msa0058440:exon |
TGCCTTGCATAACCCTAAGA+AGG | 0.509195 | 1_2:-14847175 | None:intergenic |
ATCCGCAGCAGAGACAATAA+GGG | 0.510819 | 1_2:-14844789 | None:intergenic |
TCCTGAAATGAATCTGTTAG+CGG | 0.513139 | 1_2:+14845649 | Msa0058440:CDS |
GATGGCGGGTTTGACAATAC+AGG | 0.513821 | 1_2:+14847203 | Msa0058440:three_prime_UTR |
GCGGATGATATATTGAGGTT+GGG | 0.514766 | 1_2:+14844662 | Msa0058440:CDS |
GAGAGAAAGACCCGCCTTTG+TGG | 0.515217 | 1_2:+14845709 | Msa0058440:CDS |
AAAGATTACTGGTATCGCTT+AGG | 0.515250 | 1_2:+14846766 | Msa0058440:CDS |
TCAGCTTTGGGATTACCGTA+TGG | 0.515680 | 1_2:+14844147 | Msa0058440:CDS |
AATTTCTTATCCCGAGTTGT+CGG | 0.517731 | 1_2:-14847562 | None:intergenic |
GCTGAAGAGGAGAGAAACTA+AGG | 0.517886 | 1_2:+14847937 | Msa0058440:three_prime_UTR |
GAGACAATAAGGGGCAATGT+TGG | 0.518990 | 1_2:-14844779 | None:intergenic |
GCTGAAGAAAATGATGAAGA+AGG | 0.521202 | 1_2:+14847347 | Msa0058440:three_prime_UTR |
GGCGGATGATATATTGAGGT+TGG | 0.522115 | 1_2:+14844661 | Msa0058440:CDS |
AAAATGATGAAGAAGGTGGA+TGG | 0.523173 | 1_2:+14847354 | Msa0058440:three_prime_UTR |
TTCATCTTTCACAAAATGCA+GGG | 0.524550 | 1_2:-14846668 | None:intergenic |
GCTCTTCGCCAAGGTAATGC+TGG | 0.527554 | 1_2:+14846796 | Msa0058440:CDS |
CTTGACTCCACCACAATCAA+AGG | 0.528110 | 1_2:-14847845 | None:intergenic |
AACAAATGTCTTAAGAGCCT+CGG | 0.529714 | 1_2:-14847804 | None:intergenic |
GATTGCTTATCTTCAACAGA+AGG | 0.530053 | 1_2:+14846630 | Msa0058440:CDS |
CTTTATTCTACACAAAAGAC+CGG | 0.531110 | 1_2:+14845744 | Msa0058440:CDS |
ATAGGCAAGTTAAGATTTGG+AGG | 0.531307 | 1_2:+14844813 | Msa0058440:CDS |
CCACCGCTGCTAACTTCGCT+AGG | 0.531422 | 1_2:+14848080 | Msa0058440:three_prime_UTR |
TCCAAAACCTATCATGCTCT+CGG | 0.531875 | 1_2:-14845613 | None:intergenic |
TGTGATGTTCCATGCCAAAC+AGG | 0.531879 | 1_2:+14845511 | Msa0058440:CDS |
CTCAATCAGCGTACCTGGGA+AGG | 0.533314 | 1_2:-14848385 | None:intergenic |
AAAATTTGAGAAAATGCTCC+TGG | 0.534264 | 1_2:-14848418 | None:intergenic |
CGAAACCCATTTGTTATCTG+CGG | 0.534959 | 1_2:+14848214 | Msa0058440:three_prime_UTR |
TCAAAGGACGGTTATGGTAG+GGG | 0.536824 | 1_2:+14845941 | Msa0058440:CDS |
AGATAAAAGTATTCGCATAT+GGG | 0.537328 | 1_2:+14845556 | Msa0058440:CDS |
ATCAAAGGACGGTTATGGTA+GGG | 0.538337 | 1_2:+14845940 | Msa0058440:CDS |
AGTACAAAGCTGCCCCTCCT+GGG | 0.538762 | 1_2:-14848311 | None:intergenic |
CGAAGTTAGCAGCGGTGGCA+AGG | 0.539636 | 1_2:-14848075 | None:intergenic |
TGAGTTGTATTGCATATCAA+AGG | 0.541382 | 1_2:+14845925 | Msa0058440:CDS |
TAGCATCAGTGGCAATTGGA+AGG | 0.542959 | 1_2:-14846099 | None:intergenic |
CAAAGCTGCCCCTCCTGGGT+TGG | 0.543493 | 1_2:-14848307 | None:intergenic |
ATGTTGCTGCGTCAGTGCAT+GGG | 0.543511 | 1_2:+14847030 | Msa0058440:three_prime_UTR |
AGAAGGTGGATGGGAGATGG+AGG | 0.543788 | 1_2:+14847364 | Msa0058440:three_prime_UTR |
ATTGCTTATCTTCAACAGAA+GGG | 0.544583 | 1_2:+14846631 | Msa0058440:CDS |
GAAAAGGAAGAGTGCTTCAC+CGG | 0.545410 | 1_2:+14844640 | Msa0058440:CDS |
CACCGGCGGATGATATATTG+AGG | 0.545859 | 1_2:+14844657 | Msa0058440:CDS |
AAATGATGAAGAAGGTGGAT+GGG | 0.546354 | 1_2:+14847355 | Msa0058440:three_prime_UTR |
GTTATAAGTTCTTTACTGCC+GGG | 0.546773 | 1_2:+14847774 | Msa0058440:three_prime_UTR |
TGGAGACTAGCGAGGATCCA+TGG | 0.547411 | 1_2:-14844112 | None:intergenic |
ATCAGTCATATTTCTTTCCG+CGG | 0.547998 | 1_2:-14848167 | None:intergenic |
GCCTTGCATAACCCTAAGAA+GGG | 0.550175 | 1_2:-14847174 | None:intergenic |
ACAACTTGAAAGGAAGTGCT+GGG | 0.552532 | 1_2:-14847724 | None:intergenic |
ACCAAGAGTAACAGAGTGAA+GGG | 0.552759 | 1_2:+14844067 | Msa0058440:CDS |
GTTTGCAGATCGAGCTGAAG+AGG | 0.553337 | 1_2:+14847924 | Msa0058440:three_prime_UTR |
CCTAGCGAAGTTAGCAGCGG+TGG | 0.553480 | 1_2:-14848080 | None:intergenic |
TTTGGAACTATAAGCTGCAT+AGG | 0.555072 | 1_2:+14844369 | Msa0058440:CDS |
CCTCCTTCACCCGTCATGTG+TGG | 0.555219 | 1_2:+14847140 | Msa0058440:three_prime_UTR |
CTGCCAGTTCCAGATTCGAA+TGG | 0.556517 | 1_2:-14844486 | None:intergenic |
AGTACTTCCATTTCGACGAC+CGG | 0.557006 | 1_2:+14845808 | Msa0058440:CDS |
CTTTCCCCTCAGGCAAAGAT+GGG | 0.557041 | 1_2:-14847100 | None:intergenic |
CAATCACTTCCACACATGAC+GGG | 0.557361 | 1_2:-14847149 | None:intergenic |
TATCAAAGGACGGTTATGGT+AGG | 0.559025 | 1_2:+14845939 | Msa0058440:CDS |
CCGTCATGTGTGGAAGTGAT+TGG | 0.559558 | 1_2:+14847150 | Msa0058440:three_prime_UTR |
ATGCAAGGCATGTTTGATGG+CGG | 0.560297 | 1_2:+14847188 | Msa0058440:three_prime_UTR |
AATTTCATCATGAGAGTCCG+TGG | 0.563112 | 1_2:+14844438 | Msa0058440:CDS |
GGACAATCCAGTAAGACAGC+AGG | 0.563982 | 1_2:+14847958 | Msa0058440:three_prime_UTR |
GATATAAATTGGAACATCCA+GGG | 0.564042 | 1_2:-14846443 | None:intergenic |
ATAAAATATTGCCTTCCCAA+TGG | 0.564963 | 1_2:+14846400 | Msa0058440:CDS |
CGTATATGCTCCCGAAGAGG+AGG | 0.565597 | 1_2:+14843895 | Msa0058440:five_prime_UTR |
ACTGATGCTATATTCTATGC+AGG | 0.565696 | 1_2:+14846112 | Msa0058440:CDS |
CTACTATACCAGCATTACCT+TGG | 0.566389 | 1_2:-14846804 | None:intergenic |
CAACTTACTTTGTAGGTCAG+AGG | 0.567050 | 1_2:+14846141 | Msa0058440:CDS |
TCCTTATCATGTTCATAACA+TGG | 0.567331 | 1_2:-14846582 | None:intergenic |
TCCCCACTAACCACAAAGGC+GGG | 0.568277 | 1_2:-14845719 | None:intergenic |
AGGTTGCTGAACCGACAACT+CGG | 0.568883 | 1_2:+14847551 | Msa0058440:three_prime_UTR |
ACCTTCAGGCACCTCACTTG+AGG | 0.568888 | 1_2:+14848008 | Msa0058440:three_prime_UTR |
TGCTGATGAAGAAGAGGACG+AGG | 0.569133 | 1_2:+14847235 | Msa0058440:three_prime_UTR |
GAGGCTCCTGATGGCGACTG+GGG | 0.569513 | 1_2:+14847254 | Msa0058440:three_prime_UTR |
GAGGGAAGTGGATGATGTGA+AGG | 0.570752 | 1_2:+14847868 | Msa0058440:three_prime_UTR |
CAATGATATCCTGTTTGGCA+TGG | 0.572370 | 1_2:-14845520 | None:intergenic |
GCCCCTTATTGTCTCTGCTG+CGG | 0.572464 | 1_2:+14844787 | Msa0058440:CDS |
TTGTGTTTGATCTTCAGCAA+AGG | 0.572764 | 1_2:+14846173 | Msa0058440:CDS |
AGAGAGAAGAAAGAAAGAGA+AGG | 0.573036 | 1_2:-14843963 | None:intergenic |
GACACCCCAAAAGCTTCTGT+TGG | 0.574415 | 1_2:+14847410 | Msa0058440:three_prime_UTR |
GTTTCCACCCTAAACGTCCA+TGG | 0.575277 | 1_2:+14844095 | Msa0058440:CDS |
CCAATCACTTCCACACATGA+CGG | 0.575426 | 1_2:-14847150 | None:intergenic |
GAAATGAATCTGTTAGCGGC+TGG | 0.577661 | 1_2:+14845653 | Msa0058440:CDS |
TCAATTTGGCTATAGAAAGT+GGG | 0.577770 | 1_2:+14846701 | Msa0058440:CDS |
ACCCGCCTTTGTGGTTAGTG+GGG | 0.579742 | 1_2:+14845718 | Msa0058440:CDS |
CTTCCACACATGACGGGTGA+AGG | 0.580092 | 1_2:-14847143 | None:intergenic |
TGGGATGCAACAAAGCGGAC+TGG | 0.580446 | 1_2:+14845575 | Msa0058440:CDS |
TCAAGAAACATGGATTTCAA+GGG | 0.581495 | 1_2:-14847590 | None:intergenic |
AGAGACGGTACTTTCCCCTC+AGG | 0.581696 | 1_2:-14847110 | None:intergenic |
AGACAACATATTTGATAAAG+GGG | 0.581710 | 1_2:-14846219 | None:intergenic |
CAACCTCTCTTCGTCTCTGG+AGG | 0.581935 | 1_2:+14844235 | Msa0058440:CDS |
TGCATAGAATATAGCATCAG+TGG | 0.582342 | 1_2:-14846110 | None:intergenic |
CGAAGAGGAGGGTTCTCAGA+AGG | 0.582807 | 1_2:+14843907 | Msa0058440:five_prime_UTR |
TGGGAAGTGGACACTTTGAG+AGG | 0.584231 | 1_2:+14845467 | Msa0058440:CDS |
TCCCATTATCTCCATTGGGA+AGG | 0.585900 | 1_2:-14846411 | None:intergenic |
ACTGGCATGCCAGTAGTTGG+GGG | 0.586875 | 1_2:-14847455 | None:intergenic |
AACCAAGAGTAACAGAGTGA+AGG | 0.586987 | 1_2:+14844066 | Msa0058440:CDS |
TTGCACCGCAGATAACAAAT+GGG | 0.587536 | 1_2:-14848219 | None:intergenic |
GCCAATCTATCGAGGACAGA+AGG | 0.587719 | 1_2:+14848249 | Msa0058440:three_prime_UTR |
TTGTGTTCAGATGTAGATGG+TGG | 0.589665 | 1_2:+14845896 | Msa0058440:CDS |
TTCGTCAACATCTTCGAGAG+AGG | 0.593363 | 1_2:-14844037 | None:intergenic |
TTGAACATCACCCATATACA+AGG | 0.595049 | 1_2:-14846961 | None:intergenic |
TGCTGCGTCAGTGCATGGGT+TGG | 0.595285 | 1_2:+14847034 | Msa0058440:three_prime_UTR |
AGCATCAGTGGCAATTGGAA+GGG | 0.595677 | 1_2:-14846098 | None:intergenic |
GATTGTGGTGGAGTCAAGGA+GGG | 0.595914 | 1_2:+14847850 | Msa0058440:three_prime_UTR |
GGGAATTGCTGATGAAGAAG+AGG | 0.596153 | 1_2:+14847229 | Msa0058440:three_prime_UTR |
GAAGAGGACGAGGCTCCTGA+TGG | 0.596443 | 1_2:+14847245 | Msa0058440:three_prime_UTR |
GGTTGGATGATGTTGCAAAA+CGG | 0.596455 | 1_2:+14847051 | Msa0058440:three_prime_UTR |
TTGCATCAATAGTTATTACT+CGG | 0.598697 | 1_2:-14846516 | None:intergenic |
TCCTCGATAGATTGGCACAT+AGG | 0.599166 | 1_2:-14848242 | None:intergenic |
AACCTCAATATATCATCCGC+CGG | 0.599514 | 1_2:-14844659 | None:intergenic |
ACCTCAAGTGAGGTGCCTGA+AGG | 0.600260 | 1_2:-14848009 | None:intergenic |
GGGTTTGACAATACAGGTCG+GGG | 0.601660 | 1_2:+14847209 | Msa0058440:three_prime_UTR |
ACAGAGCAGTCCAGAAGCAT+CGG | 0.601868 | 1_2:-14848359 | None:intergenic |
GTACTTCCATTTCGACGACC+GGG | 0.604140 | 1_2:+14845809 | Msa0058440:CDS |
GAAGAAAATGATGAAGAAGG+TGG | 0.604276 | 1_2:+14847350 | Msa0058440:three_prime_UTR |
CTGGTATCGCTTAGGAGTCG+AGG | 0.605029 | 1_2:+14846774 | Msa0058440:CDS |
TCATCTAGCACTAGTGTGAG+AGG | 0.607052 | 1_2:+14847698 | Msa0058440:three_prime_UTR |
TGATTGAGCTATATGGGACC+AGG | 0.607063 | 1_2:+14848400 | Msa0058440:three_prime_UTR |
TGATGTTCAAGAACGTGTCA+AGG | 0.607601 | 1_2:+14846974 | Msa0058440:three_prime_UTR |
TCCAGCTGAGACAACTTGAA+AGG | 0.608870 | 1_2:-14847734 | None:intergenic |
TGATTCAAGCTTAAAGAACC+CGG | 0.609536 | 1_2:-14845827 | None:intergenic |
ATATCATACTTGTTCAATCG+GGG | 0.609969 | 1_2:+14848718 | Msa0058440:three_prime_UTR |
AACTTGAAAGGAAGTGCTGG+GGG | 0.610877 | 1_2:-14847722 | None:intergenic |
CCACACATGACGGGTGAAGG+AGG | 0.611441 | 1_2:-14847140 | None:intergenic |
TGTTCCAATTTATATCACAA+AGG | 0.611658 | 1_2:+14846450 | Msa0058440:CDS |
TGTCAATTAGGGTTCCCATA+CGG | 0.613837 | 1_2:-14844162 | None:intergenic |
TTAGCGGCTGGTCACGACAG+TGG | 0.614700 | 1_2:+14845665 | Msa0058440:CDS |
ACACGACGGTCCCGTTCGCG+GGG | 0.619176 | 1_2:+14844195 | Msa0058440:CDS |
AAAACCAAGCGAAGACAGCA+AGG | 0.620843 | 1_2:+14848131 | Msa0058440:three_prime_UTR |
AATGTCCCATCTTTGCCTGA+GGG | 0.622366 | 1_2:+14847095 | Msa0058440:three_prime_UTR |
GGTTGCTGAACCGACAACTC+GGG | 0.624392 | 1_2:+14847552 | Msa0058440:three_prime_UTR |
GGAGTCGAGGCTCTTCGCCA+AGG | 0.624645 | 1_2:+14846787 | Msa0058440:CDS |
TCACTCGCACTCACAATCCA+CGG | 0.625117 | 1_2:-14844455 | None:intergenic |
TTGTATTGCATATCAAAGGA+CGG | 0.625649 | 1_2:+14845929 | Msa0058440:CDS |
TTACCTCCAGAGACGAAGAG+AGG | 0.626518 | 1_2:-14844238 | None:intergenic |
TATCATACTTGTTCAATCGG+GGG | 0.626804 | 1_2:+14848719 | Msa0058440:three_prime_UTR |
GACGCAGCAACATAAGCAAG+AGG | 0.628143 | 1_2:-14847020 | None:intergenic |
ACCTATGTGCCAATCTATCG+AGG | 0.628248 | 1_2:+14848241 | Msa0058440:three_prime_UTR |
TAAGGAACTCACAGCTCTGT+GGG | 0.628814 | 1_2:+14846599 | Msa0058440:CDS |
TAATGTCCCATCTTTGCCTG+AGG | 0.632430 | 1_2:+14847094 | Msa0058440:three_prime_UTR |
ATCCCCACTAACCACAAAGG+CGG | 0.632859 | 1_2:-14845720 | None:intergenic |
TGAAGTGAAGAATGACGTGA+TGG | 0.638524 | 1_2:+14846923 | Msa0058440:three_prime_UTR |
CAAGAAACATGGATTTCAAG+GGG | 0.639367 | 1_2:-14847589 | None:intergenic |
GGATCCATGGACGTTTAGGG+TGG | 0.639666 | 1_2:-14844099 | None:intergenic |
ACTTGCGGCAGAGCATGCAG+CGG | 0.640282 | 1_2:+14847505 | Msa0058440:three_prime_UTR |
GTTAGCATTGCAGAATGCAA+TGG | 0.641158 | 1_2:+14848030 | Msa0058440:three_prime_UTR |
TAGTAGAGTATGCATATCAG+AGG | 0.641236 | 1_2:+14846821 | Msa0058440:CDS |
GACAAATTCGACGAACACGA+CGG | 0.642809 | 1_2:+14844181 | Msa0058440:CDS |
ATGTCCCATCTTTGCCTGAG+GGG | 0.644752 | 1_2:+14847096 | Msa0058440:three_prime_UTR |
AGAAGCATGAAATAGTCAAG+TGG | 0.646084 | 1_2:+14848509 | Msa0058440:three_prime_UTR |
GCGGGTTTGACAATACAGGT+CGG | 0.647948 | 1_2:+14847207 | Msa0058440:three_prime_UTR |
ATAGCTCAATCAGCGTACCT+GGG | 0.652697 | 1_2:-14848389 | None:intergenic |
ATAAGGAACTCACAGCTCTG+TGG | 0.653230 | 1_2:+14846598 | Msa0058440:CDS |
AGTATGAAGATCAAGAAACA+TGG | 0.653973 | 1_2:-14847600 | None:intergenic |
CAACTTGAAAGGAAGTGCTG+GGG | 0.654027 | 1_2:-14847723 | None:intergenic |
GAAGGAGGCATCAAGAGAGA+CGG | 0.654809 | 1_2:-14847125 | None:intergenic |
GACGCAGAAATCGTCACTTG+CGG | 0.655813 | 1_2:+14847490 | Msa0058440:three_prime_UTR |
GACAACATATTTGATAAAGG+GGG | 0.656207 | 1_2:-14846218 | None:intergenic |
CCGCTGCTAACTTCGCTAGG+AGG | 0.658235 | 1_2:+14848083 | Msa0058440:three_prime_UTR |
TTGTCTCGTGGAGAGTGCAT+TGG | 0.662611 | 1_2:-14846315 | None:intergenic |
GTATATGCTCCCGAAGAGGA+GGG | 0.664212 | 1_2:+14843896 | Msa0058440:five_prime_UTR |
TGATTGTGGTGGAGTCAAGG+AGG | 0.665438 | 1_2:+14847849 | Msa0058440:three_prime_UTR |
TCCGCAGCAGAGACAATAAG+GGG | 0.665792 | 1_2:-14844788 | None:intergenic |
CTGGCATGCCAGTAGTTGGG+GGG | 0.665903 | 1_2:-14847454 | None:intergenic |
GGGAAGTGGACACTTTGAGA+GGG | 0.666705 | 1_2:+14845468 | Msa0058440:CDS |
AAGGAAGAGTGCTTCACCGG+CGG | 0.667871 | 1_2:+14844643 | Msa0058440:CDS |
ACTCTCATGATGAAATTGAA+CGG | 0.668399 | 1_2:-14844432 | None:intergenic |
TGCAATGCTAACCTCAAGTG+AGG | 0.671838 | 1_2:-14848019 | None:intergenic |
CAAAACGTGAAGTACAATAG+GGG | 0.674001 | 1_2:-14848282 | None:intergenic |
GAAATTTCGATACTGCAATG+AGG | 0.674358 | 1_2:+14847531 | Msa0058440:three_prime_UTR |
AGAATCCCCACTAACCACAA+AGG | 0.683806 | 1_2:-14845723 | None:intergenic |
AATCGTATATGCTCCCGAAG+AGG | 0.685514 | 1_2:+14843892 | Msa0058440:five_prime_UTR |
TTTGGAAGGTCATGATCGCG+GGG | 0.685932 | 1_2:+14844736 | Msa0058440:CDS |
CCTTGCATAACCCTAAGAAG+GGG | 0.686889 | 1_2:-14847173 | None:intergenic |
AAAACCTATCATGCTCTCGG+CGG | 0.687913 | 1_2:-14845610 | None:intergenic |
CAAAATGCAGGGCAACCTCG+GGG | 0.693557 | 1_2:-14846657 | None:intergenic |
TCAACAGAAGGGCTTCCCCG+AGG | 0.701332 | 1_2:+14846642 | Msa0058440:CDS |
GAAGTGAAGAATGACGTGAT+GGG | 0.708340 | 1_2:+14846924 | Msa0058440:three_prime_UTR |
GAAATCATAGTTCAACTGTG+TGG | 0.714143 | 1_2:-14848191 | None:intergenic |
ACTTGAAAGGAAGTGCTGGG+GGG | 0.719330 | 1_2:-14847721 | None:intergenic |
AAAGCTGAATGACGCCACTG+TGG | 0.723712 | 1_2:-14844132 | None:intergenic |
AAGAAACATGGATTTCAAGG+GGG | 0.727590 | 1_2:-14847588 | None:intergenic |
CCTCCTAGCGAAGTTAGCAG+CGG | 0.730256 | 1_2:-14848083 | None:intergenic |
TACTGCCGGGAAATTCACCG+AGG | 0.733859 | 1_2:+14847787 | Msa0058440:three_prime_UTR |
CGCCACTGTGGAGACTAGCG+AGG | 0.740673 | 1_2:-14844120 | None:intergenic |
GCATATGGGATGCAACAAAG+CGG | 0.744824 | 1_2:+14845570 | Msa0058440:CDS |
AGTGGAGCTTGGGATGACAA+TGG | 0.753486 | 1_2:+14846349 | Msa0058440:CDS |
ATCCTCGCTAGTCTCCACAG+TGG | 0.818902 | 1_2:+14844118 | Msa0058440:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CATTCTTTAAATTTTTTATA+AGG | - | chr1_2:14846060-14846079 | None:intergenic | 10.0% |
!!! | TTGTATATTTTTTATTTGAT+CGG | + | chr1_2:14848776-14848795 | Msa0058440:three_prime_UTR | 10.0% |
!!! | TTTGATTAATTGAAATTTTC+AGG | + | chr1_2:14844326-14844345 | Msa0058440:intron | 15.0% |
!!! | TTTCTTGTTTATTAATGATA+TGG | + | chr1_2:14844916-14844935 | Msa0058440:intron | 15.0% |
!!! | TTTTTATATTATGTTAACAG+TGG | + | chr1_2:14844951-14844970 | Msa0058440:intron | 15.0% |
!! | TAAATCAAAAAACATAAAGT+CGG | - | chr1_2:14845170-14845189 | None:intergenic | 15.0% |
!! | CTTATAATACATATATTTGT+CGG | + | chr1_2:14845277-14845296 | Msa0058440:intron | 15.0% |
!! | TTATAATACATATATTTGTC+GGG | + | chr1_2:14845278-14845297 | Msa0058440:intron | 15.0% |
!! | AAAATATTAACTGAACAATA+GGG | - | chr1_2:14848475-14848494 | None:intergenic | 15.0% |
!! | CTTGTATTACATATATTTGT+CGG | + | chr1_2:14844979-14844998 | Msa0058440:intron | 20.0% |
!! | TTGTATTACATATATTTGTC+GGG | + | chr1_2:14844980-14844999 | Msa0058440:intron | 20.0% |
!!! | TATTGCATTTTCAAATAGTA+TGG | + | chr1_2:14845201-14845220 | Msa0058440:intron | 20.0% |
!! | TGTTAACATAATATAACAAC+CGG | - | chr1_2:14845235-14845254 | None:intergenic | 20.0% |
!! | ATTTAGTGAAAACATTAACT+TGG | + | chr1_2:14845372-14845391 | Msa0058440:intron | 20.0% |
!! | TTGTGAAAGATGAAAAAATT+CGG | + | chr1_2:14846677-14846696 | Msa0058440:CDS | 20.0% |
!!! | ATTTTCTCAAATTTTGTTTC+AGG | + | chr1_2:14848426-14848445 | Msa0058440:three_prime_UTR | 20.0% |
!! | GAAAATATTAACTGAACAAT+AGG | - | chr1_2:14848476-14848495 | None:intergenic | 20.0% |
!!! | TTGTTCAGTTAATATTTTCA+TGG | + | chr1_2:14848477-14848496 | Msa0058440:three_prime_UTR | 20.0% |
!!! | TGTTCAGTTAATATTTTCAT+GGG | + | chr1_2:14848478-14848497 | Msa0058440:three_prime_UTR | 20.0% |
!! | AATAAATCAATTTCGTATCT+TGG | + | chr1_2:14848589-14848608 | Msa0058440:three_prime_UTR | 20.0% |
! | ATGATTACAAGATTAAGGTT+TGG | + | chr1_2:14844351-14844370 | Msa0058440:CDS | 25.0% |
!! | CTTTAGTTGTTGATTAATTG+AGG | + | chr1_2:14844860-14844879 | Msa0058440:intron | 25.0% |
! | TGTATTACATATATTTGTCG+GGG | + | chr1_2:14844981-14845000 | Msa0058440:intron | 25.0% |
! | TGAAAATGCAAGTTTAGATT+TGG | + | chr1_2:14845043-14845062 | Msa0058440:intron | 25.0% |
!!! | TTTTTTTCTCTAAACACACT+CGG | - | chr1_2:14845097-14845116 | None:intergenic | 25.0% |
! | TTCCCAAGTTATGAATTAAT+AGG | + | chr1_2:14845122-14845141 | Msa0058440:intron | 25.0% |
! | GTCCTATTAATTCATAACTT+GGG | - | chr1_2:14845127-14845146 | None:intergenic | 25.0% |
! | TGTCCTATTAATTCATAACT+TGG | - | chr1_2:14845128-14845147 | None:intergenic | 25.0% |
! | AGTTATGAATTAATAGGACA+AGG | + | chr1_2:14845128-14845147 | Msa0058440:intron | 25.0% |
!!! | CTATTTGTTTTCAGATACAA+AGG | + | chr1_2:14845442-14845461 | Msa0058440:intron | 25.0% |
!!! | AAGATAAAAGTATTCGCATA+TGG | + | chr1_2:14845555-14845574 | Msa0058440:CDS | 25.0% |
!!! | AGATAAAAGTATTCGCATAT+GGG | + | chr1_2:14845556-14845575 | Msa0058440:CDS | 25.0% |
! | AGACAACATATTTGATAAAG+GGG | - | chr1_2:14846222-14846241 | None:intergenic | 25.0% |
! | CAGACAACATATTTGATAAA+GGG | - | chr1_2:14846223-14846242 | None:intergenic | 25.0% |
! | TGTTCCAATTTATATCACAA+AGG | + | chr1_2:14846450-14846469 | Msa0058440:CDS | 25.0% |
! | GAAACCTTTGTGATATAAAT+TGG | - | chr1_2:14846457-14846476 | None:intergenic | 25.0% |
!!! | AGCAAACATAATTTTTTGCT+TGG | + | chr1_2:14846477-14846496 | Msa0058440:CDS | 25.0% |
!!! | ACATAATTTTTTGCTTGGAT+CGG | + | chr1_2:14846482-14846501 | Msa0058440:CDS | 25.0% |
! | TTGCATCAATAGTTATTACT+CGG | - | chr1_2:14846519-14846538 | None:intergenic | 25.0% |
!!! | GTCATATTTTTTCTTGAAGA+GGG | - | chr1_2:14846563-14846582 | None:intergenic | 25.0% |
! | TGAAAAAATTCGGTTCAATT+TGG | + | chr1_2:14846687-14846706 | Msa0058440:CDS | 25.0% |
!!! | ATAGTCAAAGAGTATGTTTT+GGG | + | chr1_2:14847902-14847921 | Msa0058440:three_prime_UTR | 25.0% |
! | TTGTACTTGGATCAAATTTA+TGG | + | chr1_2:14848645-14848664 | Msa0058440:three_prime_UTR | 25.0% |
! | TGGATCAAATTTATGGTTAT+AGG | + | chr1_2:14848652-14848671 | Msa0058440:three_prime_UTR | 25.0% |
! | ACATATCATACTTGTTCAAT+CGG | + | chr1_2:14848716-14848735 | Msa0058440:three_prime_UTR | 25.0% |
TTCGTCGAATTTGTCAATTA+GGG | - | chr1_2:14844176-14844195 | None:intergenic | 30.0% | |
AGGTGATGATTACAAGATTA+AGG | + | chr1_2:14844346-14844365 | Msa0058440:intron | 30.0% | |
AGGTGTTTGTTTACTTTGTT+AGG | + | chr1_2:14844389-14844408 | Msa0058440:CDS | 30.0% | |
ACTCTCATGATGAAATTGAA+CGG | - | chr1_2:14844435-14844454 | None:intergenic | 30.0% | |
! | CAGATGAATACTGATCTTTT+TGG | + | chr1_2:14844686-14844705 | Msa0058440:CDS | 30.0% |
! | ATGAATACTGATCTTTTTGG+TGG | + | chr1_2:14844689-14844708 | Msa0058440:CDS | 30.0% |
! | TGCTGTTGTTAAGTATGTTT+TGG | + | chr1_2:14844718-14844737 | Msa0058440:CDS | 30.0% |
!! | GTTGTTAAGTATGTTTTGGA+AGG | + | chr1_2:14844722-14844741 | Msa0058440:CDS | 30.0% |
ATGATAGGCAAGTTAAGATT+TGG | + | chr1_2:14844810-14844829 | Msa0058440:CDS | 30.0% | |
TAATGATATGGATGTGATTG+TGG | + | chr1_2:14844928-14844947 | Msa0058440:intron | 30.0% | |
! | TTTTGTGACAAGTTATGTTG+TGG | + | chr1_2:14845013-14845032 | Msa0058440:intron | 30.0% |
AAATGCAAGTTTAGATTTGG+AGG | + | chr1_2:14845046-14845065 | Msa0058440:intron | 30.0% | |
!!! | TTTTTTCTCTAAACACACTC+GGG | - | chr1_2:14845096-14845115 | None:intergenic | 30.0% |
ACATAATATAACAACCGGAA+TGG | - | chr1_2:14845230-14845249 | None:intergenic | 30.0% | |
TATGCAATAAAGTTGTGTTG+TGG | + | chr1_2:14845345-14845364 | Msa0058440:intron | 30.0% | |
!!! | ACTTGGTTTTGTAGTATTTG+AGG | + | chr1_2:14845389-14845408 | Msa0058440:intron | 30.0% |
!!! | TGGCATGATTGTTTTTAAGT+TGG | + | chr1_2:14845685-14845704 | Msa0058440:CDS | 30.0% |
CTTTATTCTACACAAAAGAC+CGG | + | chr1_2:14845744-14845763 | Msa0058440:CDS | 30.0% | |
ATTCATAGAAACACAAGAAC+CGG | - | chr1_2:14845766-14845785 | None:intergenic | 30.0% | |
! | AAAGAAATGCATTTTCAGCT+GGG | - | chr1_2:14845877-14845896 | None:intergenic | 30.0% |
! | AAAAGAAATGCATTTTCAGC+TGG | - | chr1_2:14845878-14845897 | None:intergenic | 30.0% |
TGAGTTGTATTGCATATCAA+AGG | + | chr1_2:14845925-14845944 | Msa0058440:CDS | 30.0% | |
TTGTATTGCATATCAAAGGA+CGG | + | chr1_2:14845929-14845948 | Msa0058440:CDS | 30.0% | |
AAGATGCAAAAAAAGGTCAT+GGG | + | chr1_2:14845972-14845991 | Msa0058440:CDS | 30.0% | |
GACAACATATTTGATAAAGG+GGG | - | chr1_2:14846221-14846240 | None:intergenic | 30.0% | |
CCAGACAACATATTTGATAA+AGG | - | chr1_2:14846224-14846243 | None:intergenic | 30.0% | |
CCTTTATCAAATATGTTGTC+TGG | + | chr1_2:14846221-14846240 | Msa0058440:CDS | 30.0% | |
ATAAAATATTGCCTTCCCAA+TGG | + | chr1_2:14846400-14846419 | Msa0058440:CDS | 30.0% | |
ATAATCCCATTATCTCCATT+GGG | - | chr1_2:14846418-14846437 | None:intergenic | 30.0% | |
TATAATCCCATTATCTCCAT+TGG | - | chr1_2:14846419-14846438 | None:intergenic | 30.0% | |
TAATGGGATTATAAAAACCC+TGG | + | chr1_2:14846426-14846445 | Msa0058440:CDS | 30.0% | |
GATATAAATTGGAACATCCA+GGG | - | chr1_2:14846446-14846465 | None:intergenic | 30.0% | |
TGATATAAATTGGAACATCC+AGG | - | chr1_2:14846447-14846466 | None:intergenic | 30.0% | |
!!! | CATAATTTTTTGCTTGGATC+GGG | + | chr1_2:14846483-14846502 | Msa0058440:CDS | 30.0% |
!!! | GGTCATATTTTTTCTTGAAG+AGG | - | chr1_2:14846564-14846583 | None:intergenic | 30.0% |
ACCATGTTATGAACATGATA+AGG | + | chr1_2:14846581-14846600 | Msa0058440:CDS | 30.0% | |
TCCTTATCATGTTCATAACA+TGG | - | chr1_2:14846585-14846604 | None:intergenic | 30.0% | |
ATTGCTTATCTTCAACAGAA+GGG | + | chr1_2:14846631-14846650 | Msa0058440:CDS | 30.0% | |
TTCATCTTTCACAAAATGCA+GGG | - | chr1_2:14846671-14846690 | None:intergenic | 30.0% | |
TTTCATCTTTCACAAAATGC+AGG | - | chr1_2:14846672-14846691 | None:intergenic | 30.0% | |
TTCAATTTGGCTATAGAAAG+TGG | + | chr1_2:14846700-14846719 | Msa0058440:CDS | 30.0% | |
TCAATTTGGCTATAGAAAGT+GGG | + | chr1_2:14846701-14846720 | Msa0058440:CDS | 30.0% | |
CAATTGATGAGAAAGATTAC+TGG | + | chr1_2:14846755-14846774 | Msa0058440:CDS | 30.0% | |
! | AGAGGACAAAAAATTTTGAG+AGG | + | chr1_2:14846839-14846858 | Msa0058440:CDS | 30.0% |
GTCTTTCTTTATCTTGTAAC+CGG | + | chr1_2:14846864-14846883 | Msa0058440:exon | 30.0% | |
TTTCACAATGCCTTGTATAT+GGG | + | chr1_2:14846951-14846970 | Msa0058440:three_prime_UTR | 30.0% | |
! | ATAGTTGATGTAGATGCAAA+TGG | + | chr1_2:14847290-14847309 | Msa0058440:three_prime_UTR | 30.0% |
TCAAGAAACATGGATTTCAA+GGG | - | chr1_2:14847593-14847612 | None:intergenic | 30.0% | |
ATCAAGAAACATGGATTTCA+AGG | - | chr1_2:14847594-14847613 | None:intergenic | 30.0% | |
AGTATGAAGATCAAGAAACA+TGG | - | chr1_2:14847603-14847622 | None:intergenic | 30.0% | |
ATGTTTCTTGATCTTCATAC+TGG | + | chr1_2:14847602-14847621 | Msa0058440:three_prime_UTR | 30.0% | |
TCATACAATTCCTTTGATTG+TGG | + | chr1_2:14847835-14847854 | Msa0058440:three_prime_UTR | 30.0% | |
!! | CATAGTCAAAGAGTATGTTT+TGG | + | chr1_2:14847901-14847920 | Msa0058440:three_prime_UTR | 30.0% |
ACAAAACGTGAAGTACAATA+GGG | - | chr1_2:14848286-14848305 | None:intergenic | 30.0% | |
AAAATTTGAGAAAATGCTCC+TGG | - | chr1_2:14848421-14848440 | None:intergenic | 30.0% | |
! | TTAATATTTTCATGGGACTG+TGG | + | chr1_2:14848485-14848504 | Msa0058440:three_prime_UTR | 30.0% |
TTCATACACAAGAAAGTGAA+AGG | + | chr1_2:14848622-14848641 | Msa0058440:three_prime_UTR | 30.0% | |
CATATCATACTTGTTCAATC+GGG | + | chr1_2:14848717-14848736 | Msa0058440:three_prime_UTR | 30.0% | |
ATATCATACTTGTTCAATCG+GGG | + | chr1_2:14848718-14848737 | Msa0058440:three_prime_UTR | 30.0% | |
AGAGAGAAGAAAGAAAGAGA+AGG | - | chr1_2:14843966-14843985 | None:intergenic | 35.0% | |
! | ATGTGTGTGATTTGGGATTA+GGG | - | chr1_2:14844008-14844027 | None:intergenic | 35.0% |
! | AATGGTGATGTGTGTGATTT+GGG | - | chr1_2:14844015-14844034 | None:intergenic | 35.0% |
! | TAATGGTGATGTGTGTGATT+TGG | - | chr1_2:14844016-14844035 | None:intergenic | 35.0% |
GTTCGTCGAATTTGTCAATT+AGG | - | chr1_2:14844177-14844196 | None:intergenic | 35.0% | |
! | TTTGGAACTATAAGCTGCAT+AGG | + | chr1_2:14844369-14844388 | Msa0058440:CDS | 35.0% |
CATGATGAAATTGAACGGTT+CGG | - | chr1_2:14844430-14844449 | None:intergenic | 35.0% | |
ATGATCAAACCATTCGAATC+TGG | + | chr1_2:14844477-14844496 | Msa0058440:CDS | 35.0% | |
!!! | ACTTGCATTTCTGTTTTGAC+TGG | + | chr1_2:14844515-14844534 | Msa0058440:CDS | 35.0% |
GACACAACAAGATCATCTTT+GGG | - | chr1_2:14844575-14844594 | None:intergenic | 35.0% | |
AGACACAACAAGATCATCTT+TGG | - | chr1_2:14844576-14844595 | None:intergenic | 35.0% | |
ATAGGCAAGTTAAGATTTGG+AGG | + | chr1_2:14844813-14844832 | Msa0058440:CDS | 35.0% | |
GTTAAGATTTGGAGGATGAA+TGG | + | chr1_2:14844821-14844840 | Msa0058440:CDS | 35.0% | |
GTTTAGATTTGGAGGATGAA+TGG | + | chr1_2:14845054-14845073 | Msa0058440:intron | 35.0% | |
AAATAGTATGGATGCCATTC+CGG | + | chr1_2:14845213-14845232 | Msa0058440:intron | 35.0% | |
! | TGTTTTCAGATACAAAGGCA+TGG | + | chr1_2:14845447-14845466 | Msa0058440:intron | 35.0% |
!! | GTTTTCAGATACAAAGGCAT+GGG | + | chr1_2:14845448-14845467 | Msa0058440:intron | 35.0% |
TGACACAATGATATCCTGTT+TGG | - | chr1_2:14845528-14845547 | None:intergenic | 35.0% | |
TCCTGAAATGAATCTGTTAG+CGG | + | chr1_2:14845649-14845668 | Msa0058440:CDS | 35.0% | |
TGATTCAAGCTTAAAGAACC+CGG | - | chr1_2:14845830-14845849 | None:intergenic | 35.0% | |
! | CTTTTGTGTTCAGATGTAGA+TGG | + | chr1_2:14845893-14845912 | Msa0058440:CDS | 35.0% |
CAAGATGCAAAAAAAGGTCA+TGG | + | chr1_2:14845971-14845990 | Msa0058440:CDS | 35.0% | |
AGATGCAAAAAAAGGTCATG+GGG | + | chr1_2:14845973-14845992 | Msa0058440:CDS | 35.0% | |
AATATAGCATCAGTGGCAAT+TGG | - | chr1_2:14846106-14846125 | None:intergenic | 35.0% | |
TGCATAGAATATAGCATCAG+TGG | - | chr1_2:14846113-14846132 | None:intergenic | 35.0% | |
ACTGATGCTATATTCTATGC+AGG | + | chr1_2:14846112-14846131 | Msa0058440:CDS | 35.0% | |
TTGTGTTTGATCTTCAGCAA+AGG | + | chr1_2:14846173-14846192 | Msa0058440:CDS | 35.0% | |
TGTTGTCTGGTCTAATGATA+TGG | + | chr1_2:14846234-14846253 | Msa0058440:CDS | 35.0% | |
! | CTTCTTGCTGGCTATTATAA+TGG | - | chr1_2:14846287-14846306 | None:intergenic | 35.0% |
GATTGCTTATCTTCAACAGA+AGG | + | chr1_2:14846630-14846649 | Msa0058440:CDS | 35.0% | |
AAAGATTACTGGTATCGCTT+AGG | + | chr1_2:14846766-14846785 | Msa0058440:CDS | 35.0% | |
TAGTAGAGTATGCATATCAG+AGG | + | chr1_2:14846821-14846840 | Msa0058440:CDS | 35.0% | |
!! | TATACAAGGCATTGTGAAAC+TGG | - | chr1_2:14846950-14846969 | None:intergenic | 35.0% |
GTTTCACAATGCCTTGTATA+TGG | + | chr1_2:14846950-14846969 | Msa0058440:three_prime_UTR | 35.0% | |
TTGAACATCACCCATATACA+AGG | - | chr1_2:14846964-14846983 | None:intergenic | 35.0% | |
! | TGGAGATGTTACTGCAATTT+TGG | + | chr1_2:14847310-14847329 | Msa0058440:three_prime_UTR | 35.0% |
!! | GTTACTGCAATTTTGGAAGA+TGG | + | chr1_2:14847317-14847336 | Msa0058440:three_prime_UTR | 35.0% |
GCTGAAGAAAATGATGAAGA+AGG | + | chr1_2:14847347-14847366 | Msa0058440:three_prime_UTR | 35.0% | |
GAAGAAAATGATGAAGAAGG+TGG | + | chr1_2:14847350-14847369 | Msa0058440:three_prime_UTR | 35.0% | |
AAAATGATGAAGAAGGTGGA+TGG | + | chr1_2:14847354-14847373 | Msa0058440:three_prime_UTR | 35.0% | |
AAATGATGAAGAAGGTGGAT+GGG | + | chr1_2:14847355-14847374 | Msa0058440:three_prime_UTR | 35.0% | |
GAAATTTCGATACTGCAATG+AGG | + | chr1_2:14847531-14847550 | Msa0058440:three_prime_UTR | 35.0% | |
AATTTCTTATCCCGAGTTGT+CGG | - | chr1_2:14847565-14847584 | None:intergenic | 35.0% | |
AAGAAACATGGATTTCAAGG+GGG | - | chr1_2:14847591-14847610 | None:intergenic | 35.0% | |
CAAGAAACATGGATTTCAAG+GGG | - | chr1_2:14847592-14847611 | None:intergenic | 35.0% | |
TCAACTGCAAGTGATATGAT+TGG | - | chr1_2:14847662-14847681 | None:intergenic | 35.0% | |
ATATCACTTGCAGTTGAAAG+AGG | + | chr1_2:14847665-14847684 | Msa0058440:three_prime_UTR | 35.0% | |
GGTTATAAGTTCTTTACTGC+CGG | + | chr1_2:14847773-14847792 | Msa0058440:three_prime_UTR | 35.0% | |
GTTATAAGTTCTTTACTGCC+GGG | + | chr1_2:14847774-14847793 | Msa0058440:three_prime_UTR | 35.0% | |
AACAAATGTCTTAAGAGCCT+CGG | - | chr1_2:14847807-14847826 | None:intergenic | 35.0% | |
TACAATTCCTTTGATTGTGG+TGG | + | chr1_2:14847838-14847857 | Msa0058440:three_prime_UTR | 35.0% | |
ATCAGTCATATTTCTTTCCG+CGG | - | chr1_2:14848170-14848189 | None:intergenic | 35.0% | |
GAAATCATAGTTCAACTGTG+TGG | - | chr1_2:14848194-14848213 | None:intergenic | 35.0% | |
CAAAACGTGAAGTACAATAG+GGG | - | chr1_2:14848285-14848304 | None:intergenic | 35.0% | |
CACAAAACGTGAAGTACAAT+AGG | - | chr1_2:14848287-14848306 | None:intergenic | 35.0% | |
GTCTGTGATATTTCAGTTGT+AGG | + | chr1_2:14848334-14848353 | Msa0058440:three_prime_UTR | 35.0% | |
! | AGAAGCATGAAATAGTCAAG+TGG | + | chr1_2:14848509-14848528 | Msa0058440:three_prime_UTR | 35.0% |
AGAAAGTGAAAGGTTGTACT+TGG | + | chr1_2:14848632-14848651 | Msa0058440:three_prime_UTR | 35.0% | |
TATCATACTTGTTCAATCGG+GGG | + | chr1_2:14848719-14848738 | Msa0058440:three_prime_UTR | 35.0% | |
! | GTGATTTGGGATTAGGGTTA+TGG | - | chr1_2:14844002-14844021 | None:intergenic | 40.0% |
! | GATGTGTGTGATTTGGGATT+AGG | - | chr1_2:14844009-14844028 | None:intergenic | 40.0% |
ACATCTTCGAGAGAGGTTAA+TGG | - | chr1_2:14844033-14844052 | None:intergenic | 40.0% | |
AACCAAGAGTAACAGAGTGA+AGG | + | chr1_2:14844066-14844085 | Msa0058440:CDS | 40.0% | |
ACCAAGAGTAACAGAGTGAA+GGG | + | chr1_2:14844067-14844086 | Msa0058440:CDS | 40.0% | |
TGTCAATTAGGGTTCCCATA+CGG | - | chr1_2:14844165-14844184 | None:intergenic | 40.0% | |
AATTTCATCATGAGAGTCCG+TGG | + | chr1_2:14844438-14844457 | Msa0058440:CDS | 40.0% | |
! | AAACCATTCGAATCTGGAAC+TGG | + | chr1_2:14844483-14844502 | Msa0058440:CDS | 40.0% |
GGGATATTGGATCGTTGAAA+AGG | + | chr1_2:14844624-14844643 | Msa0058440:CDS | 40.0% | |
AACCTCAATATATCATCCGC+CGG | - | chr1_2:14844662-14844681 | None:intergenic | 40.0% | |
GCGGATGATATATTGAGGTT+GGG | + | chr1_2:14844662-14844681 | Msa0058440:CDS | 40.0% | |
ACATGTGTTTGAGTGTGTGT+AGG | + | chr1_2:14845252-14845271 | Msa0058440:intron | 40.0% | |
CAATGATATCCTGTTTGGCA+TGG | - | chr1_2:14845523-14845542 | None:intergenic | 40.0% | |
TCCAAAACCTATCATGCTCT+CGG | - | chr1_2:14845616-14845635 | None:intergenic | 40.0% | |
TTGTGTTCAGATGTAGATGG+TGG | + | chr1_2:14845896-14845915 | Msa0058440:CDS | 40.0% | |
TGCATATCAAAGGACGGTTA+TGG | + | chr1_2:14845935-14845954 | Msa0058440:CDS | 40.0% | |
TATCAAAGGACGGTTATGGT+AGG | + | chr1_2:14845939-14845958 | Msa0058440:CDS | 40.0% | |
ATCAAAGGACGGTTATGGTA+GGG | + | chr1_2:14845940-14845959 | Msa0058440:CDS | 40.0% | |
GACGTGCAAGATGCAAAAAA+AGG | + | chr1_2:14845965-14845984 | Msa0058440:CDS | 40.0% | |
GATGCAAAAAAAGGTCATGG+GGG | + | chr1_2:14845974-14845993 | Msa0058440:CDS | 40.0% | |
CTGTCTTTGTTGCTCGTAAT+CGG | + | chr1_2:14846002-14846021 | Msa0058440:CDS | 40.0% | |
GCTATATTCTATGCAGGAAC+AGG | + | chr1_2:14846118-14846137 | Msa0058440:CDS | 40.0% | |
GAACAGGCAACTTACTTTGT+AGG | + | chr1_2:14846134-14846153 | Msa0058440:CDS | 40.0% | |
CAACTTACTTTGTAGGTCAG+AGG | + | chr1_2:14846141-14846160 | Msa0058440:CDS | 40.0% | |
TACTTTGTAGGTCAGAGGAT+AGG | + | chr1_2:14846146-14846165 | Msa0058440:CDS | 40.0% | |
ACTTTGTAGGTCAGAGGATA+GGG | + | chr1_2:14846147-14846166 | Msa0058440:CDS | 40.0% | |
CTTCAGCAAAGGATTGTTCT+TGG | + | chr1_2:14846184-14846203 | Msa0058440:CDS | 40.0% | |
CATATTTGATAAAGGGGGTC+TGG | - | chr1_2:14846216-14846235 | None:intergenic | 40.0% | |
!! | TTTTTACACGGATTGTCTCG+TGG | - | chr1_2:14846330-14846349 | None:intergenic | 40.0% |
GAGACAATCCGTGTAAAAAG+TGG | + | chr1_2:14846331-14846350 | Msa0058440:CDS | 40.0% | |
!!! | ATTTTTTGCTTGGATCGGGA+TGG | + | chr1_2:14846487-14846506 | Msa0058440:CDS | 40.0% |
CTACTATACCAGCATTACCT+TGG | - | chr1_2:14846807-14846826 | None:intergenic | 40.0% | |
TTATCTTGTAACCGGCAACT+TGG | + | chr1_2:14846872-14846891 | Msa0058440:exon | 40.0% | |
TGAAGTGAAGAATGACGTGA+TGG | + | chr1_2:14846923-14846942 | Msa0058440:three_prime_UTR | 40.0% | |
GAAGTGAAGAATGACGTGAT+GGG | + | chr1_2:14846924-14846943 | Msa0058440:three_prime_UTR | 40.0% | |
TGATGTTCAAGAACGTGTCA+AGG | + | chr1_2:14846974-14846993 | Msa0058440:three_prime_UTR | 40.0% | |
! | TCAAGAACGTGTCAAGGTTT+TGG | + | chr1_2:14846980-14846999 | Msa0058440:three_prime_UTR | 40.0% |
!!! | GTCAAGGTTTTGGAGAATGT+CGG | + | chr1_2:14846990-14847009 | Msa0058440:three_prime_UTR | 40.0% |
GGTTGGATGATGTTGCAAAA+CGG | + | chr1_2:14847051-14847070 | Msa0058440:three_prime_UTR | 40.0% | |
GTTATGCAAGGCATGTTTGA+TGG | + | chr1_2:14847185-14847204 | Msa0058440:three_prime_UTR | 40.0% | |
! | GAGATGGAGGATTTAGAGTT+GGG | + | chr1_2:14847377-14847396 | Msa0058440:three_prime_UTR | 40.0% |
ACGATTTCTGCGTCCATATA+TGG | - | chr1_2:14847484-14847503 | None:intergenic | 40.0% | |
AGATGAAAATGCACGCAGAT+AGG | - | chr1_2:14847636-14847655 | None:intergenic | 40.0% | |
!! | ACAACTTGAAAGGAAGTGCT+GGG | - | chr1_2:14847727-14847746 | None:intergenic | 40.0% |
CTGGATGAAAAACTTAGAGC+TGG | + | chr1_2:14847752-14847771 | Msa0058440:three_prime_UTR | 40.0% | |
GTTAGCATTGCAGAATGCAA+TGG | + | chr1_2:14848030-14848049 | Msa0058440:three_prime_UTR | 40.0% | |
!! | TTCGCTTGGTTTTCAATGGT+GGG | - | chr1_2:14848124-14848143 | None:intergenic | 40.0% |
!! | TGTCTTCGCTTGGTTTTCAA+TGG | - | chr1_2:14848128-14848147 | None:intergenic | 40.0% |
! | CGCAGATAACAAATGGGTTT+CGG | - | chr1_2:14848216-14848235 | None:intergenic | 40.0% |
!! | CGAAACCCATTTGTTATCTG+CGG | + | chr1_2:14848214-14848233 | Msa0058440:three_prime_UTR | 40.0% |
TTGCACCGCAGATAACAAAT+GGG | - | chr1_2:14848222-14848241 | None:intergenic | 40.0% | |
! | GTACGCTGATTGAGCTATAT+GGG | + | chr1_2:14848394-14848413 | Msa0058440:three_prime_UTR | 40.0% |
AATCGTATATGCTCCCGAAG+AGG | + | chr1_2:14843892-14843911 | Msa0058440:five_prime_UTR | 45.0% | |
TTCGTCAACATCTTCGAGAG+AGG | - | chr1_2:14844040-14844059 | None:intergenic | 45.0% | |
ACCCTTCACTCTGTTACTCT+TGG | - | chr1_2:14844071-14844090 | None:intergenic | 45.0% | |
!! | TCAGCTTTGGGATTACCGTA+TGG | + | chr1_2:14844147-14844166 | Msa0058440:CDS | 45.0% |
!! | CAGCTTTGGGATTACCGTAT+GGG | + | chr1_2:14844148-14844167 | Msa0058440:CDS | 45.0% |
GACAAATTCGACGAACACGA+CGG | + | chr1_2:14844181-14844200 | Msa0058440:CDS | 45.0% | |
! | ACTGTTCGCGTTTGGGATAT+TGG | + | chr1_2:14844611-14844630 | Msa0058440:CDS | 45.0% |
!! | GAAAAGGAAGAGTGCTTCAC+CGG | + | chr1_2:14844640-14844659 | Msa0058440:CDS | 45.0% |
GGCGGATGATATATTGAGGT+TGG | + | chr1_2:14844661-14844680 | Msa0058440:CDS | 45.0% | |
!!! | GTTTTGGAAGGTCATGATCG+CGG | + | chr1_2:14844734-14844753 | Msa0058440:CDS | 45.0% |
!! | TTTTGGAAGGTCATGATCGC+GGG | + | chr1_2:14844735-14844754 | Msa0058440:CDS | 45.0% |
TCATGATCGCGGGGTTAATT+GGG | + | chr1_2:14844745-14844764 | Msa0058440:CDS | 45.0% | |
GAGACAATAAGGGGCAATGT+TGG | - | chr1_2:14844782-14844801 | None:intergenic | 45.0% | |
ATCCGCAGCAGAGACAATAA+GGG | - | chr1_2:14844792-14844811 | None:intergenic | 45.0% | |
! | AGATACAAAGGCATGGGAAG+TGG | + | chr1_2:14845454-14845473 | Msa0058440:intron | 45.0% |
TGTGATGTTCCATGCCAAAC+AGG | + | chr1_2:14845511-14845530 | Msa0058440:CDS | 45.0% | |
GCATATGGGATGCAACAAAG+CGG | + | chr1_2:14845570-14845589 | Msa0058440:CDS | 45.0% | |
AAAACCTATCATGCTCTCGG+CGG | - | chr1_2:14845613-14845632 | None:intergenic | 45.0% | |
GCCGCTAACAGATTCATTTC+AGG | - | chr1_2:14845653-14845672 | None:intergenic | 45.0% | |
GAAATGAATCTGTTAGCGGC+TGG | + | chr1_2:14845653-14845672 | Msa0058440:CDS | 45.0% | |
AGAATCCCCACTAACCACAA+AGG | - | chr1_2:14845726-14845745 | None:intergenic | 45.0% | |
AGTACTTCCATTTCGACGAC+CGG | + | chr1_2:14845808-14845827 | Msa0058440:CDS | 45.0% | |
GGGCTATAGGAAAGAGTCTT+TGG | - | chr1_2:14845857-14845876 | None:intergenic | 45.0% | |
! | TGCATTTTCAGCTGGGCTAT+AGG | - | chr1_2:14845870-14845889 | None:intergenic | 45.0% |
TCAAAGGACGGTTATGGTAG+GGG | + | chr1_2:14845941-14845960 | Msa0058440:CDS | 45.0% | |
AGCATCAGTGGCAATTGGAA+GGG | - | chr1_2:14846101-14846120 | None:intergenic | 45.0% | |
TAGCATCAGTGGCAATTGGA+AGG | - | chr1_2:14846102-14846121 | None:intergenic | 45.0% | |
TCCGTGTAAAAAGTGGAGCT+TGG | + | chr1_2:14846338-14846357 | Msa0058440:CDS | 45.0% | |
!!! | CCCAAGCTCCACTTTTTACA+CGG | - | chr1_2:14846342-14846361 | None:intergenic | 45.0% |
CCGTGTAAAAAGTGGAGCTT+GGG | + | chr1_2:14846339-14846358 | Msa0058440:CDS | 45.0% | |
TGCCTTCCCAATGGAGATAA+TGG | + | chr1_2:14846409-14846428 | Msa0058440:CDS | 45.0% | |
GCCTTCCCAATGGAGATAAT+GGG | + | chr1_2:14846410-14846429 | Msa0058440:CDS | 45.0% | |
TCCCATTATCTCCATTGGGA+AGG | - | chr1_2:14846414-14846433 | None:intergenic | 45.0% | |
ATAAGGAACTCACAGCTCTG+TGG | + | chr1_2:14846598-14846617 | Msa0058440:CDS | 45.0% | |
TAAGGAACTCACAGCTCTGT+GGG | + | chr1_2:14846599-14846618 | Msa0058440:CDS | 45.0% | |
TAATGTCCCATCTTTGCCTG+AGG | + | chr1_2:14847094-14847113 | Msa0058440:three_prime_UTR | 45.0% | |
AATGTCCCATCTTTGCCTGA+GGG | + | chr1_2:14847095-14847114 | Msa0058440:three_prime_UTR | 45.0% | |
CAATCACTTCCACACATGAC+GGG | - | chr1_2:14847152-14847171 | None:intergenic | 45.0% | |
CCAATCACTTCCACACATGA+CGG | - | chr1_2:14847153-14847172 | None:intergenic | 45.0% | |
! | AAGTGATTGGCCCCTTCTTA+GGG | + | chr1_2:14847163-14847182 | Msa0058440:three_prime_UTR | 45.0% |
CCTTGCATAACCCTAAGAAG+GGG | - | chr1_2:14847176-14847195 | None:intergenic | 45.0% | |
GCCTTGCATAACCCTAAGAA+GGG | - | chr1_2:14847177-14847196 | None:intergenic | 45.0% | |
TGCCTTGCATAACCCTAAGA+AGG | - | chr1_2:14847178-14847197 | None:intergenic | 45.0% | |
ATGCAAGGCATGTTTGATGG+CGG | + | chr1_2:14847188-14847207 | Msa0058440:three_prime_UTR | 45.0% | |
GGGAATTGCTGATGAAGAAG+AGG | + | chr1_2:14847229-14847248 | Msa0058440:three_prime_UTR | 45.0% | |
! | GGAGATGGAGGATTTAGAGT+TGG | + | chr1_2:14847376-14847395 | Msa0058440:three_prime_UTR | 45.0% |
! | TGTGCCAACAGAAGCTTTTG+GGG | - | chr1_2:14847417-14847436 | None:intergenic | 45.0% |
! | GTGTGCCAACAGAAGCTTTT+GGG | - | chr1_2:14847418-14847437 | None:intergenic | 45.0% |
! | TGTGTGCCAACAGAAGCTTT+TGG | - | chr1_2:14847419-14847438 | None:intergenic | 45.0% |
! | GTTTTTATCCCCCCAACTAC+TGG | + | chr1_2:14847446-14847465 | Msa0058440:three_prime_UTR | 45.0% |
TTACTGGCATGCCAGTAGTT+GGG | - | chr1_2:14847460-14847479 | None:intergenic | 45.0% | |
GCATGCCAGTAAGCCATATA+TGG | + | chr1_2:14847468-14847487 | Msa0058440:three_prime_UTR | 45.0% | |
TGCGTCCATATATGGCTTAC+TGG | - | chr1_2:14847476-14847495 | None:intergenic | 45.0% | |
CACTTGCAGTTGAAAGAGGT+TGG | + | chr1_2:14847669-14847688 | Msa0058440:three_prime_UTR | 45.0% | |
TCATCTAGCACTAGTGTGAG+AGG | + | chr1_2:14847698-14847717 | Msa0058440:three_prime_UTR | 45.0% | |
!! | AACTTGAAAGGAAGTGCTGG+GGG | - | chr1_2:14847725-14847744 | None:intergenic | 45.0% |
!! | CAACTTGAAAGGAAGTGCTG+GGG | - | chr1_2:14847726-14847745 | None:intergenic | 45.0% |
! | GACAACTTGAAAGGAAGTGC+TGG | - | chr1_2:14847728-14847747 | None:intergenic | 45.0% |
!! | TCCTTTCAAGTTGTCTCAGC+TGG | + | chr1_2:14847733-14847752 | Msa0058440:three_prime_UTR | 45.0% |
TCCAGCTGAGACAACTTGAA+AGG | - | chr1_2:14847737-14847756 | None:intergenic | 45.0% | |
CTTGACTCCACCACAATCAA+AGG | - | chr1_2:14847848-14847867 | None:intergenic | 45.0% | |
! | CTTTGATTGTGGTGGAGTCA+AGG | + | chr1_2:14847846-14847865 | Msa0058440:three_prime_UTR | 45.0% |
GCTGAAGAGGAGAGAAACTA+AGG | + | chr1_2:14847937-14847956 | Msa0058440:three_prime_UTR | 45.0% | |
TTTCACTCACTGCAACCTTC+AGG | + | chr1_2:14847994-14848013 | Msa0058440:three_prime_UTR | 45.0% | |
TGCAATGCTAACCTCAAGTG+AGG | - | chr1_2:14848022-14848041 | None:intergenic | 45.0% | |
TGCAATGGTAACCTGCTTCA+AGG | + | chr1_2:14848045-14848064 | Msa0058440:three_prime_UTR | 45.0% | |
AAGGTTCTTTGCCTTGAAGC+AGG | - | chr1_2:14848059-14848078 | None:intergenic | 45.0% | |
!! | CTTCGCTTGGTTTTCAATGG+TGG | - | chr1_2:14848125-14848144 | None:intergenic | 45.0% |
AAAACCAAGCGAAGACAGCA+AGG | + | chr1_2:14848131-14848150 | Msa0058440:three_prime_UTR | 45.0% | |
GTTGCACCGCAGATAACAAA+TGG | - | chr1_2:14848223-14848242 | None:intergenic | 45.0% | |
ACCTATGTGCCAATCTATCG+AGG | + | chr1_2:14848241-14848260 | Msa0058440:three_prime_UTR | 45.0% | |
TCCTCGATAGATTGGCACAT+AGG | - | chr1_2:14848245-14848264 | None:intergenic | 45.0% | |
TCCTTCTGTCCTCGATAGAT+TGG | - | chr1_2:14848253-14848272 | None:intergenic | 45.0% | |
ATAGCTCAATCAGCGTACCT+GGG | - | chr1_2:14848392-14848411 | None:intergenic | 45.0% | |
TATAGCTCAATCAGCGTACC+TGG | - | chr1_2:14848393-14848412 | None:intergenic | 45.0% | |
! | GGTACGCTGATTGAGCTATA+TGG | + | chr1_2:14848393-14848412 | Msa0058440:three_prime_UTR | 45.0% |
TGATTGAGCTATATGGGACC+AGG | + | chr1_2:14848400-14848419 | Msa0058440:three_prime_UTR | 45.0% | |
GTATATGCTCCCGAAGAGGA+GGG | + | chr1_2:14843896-14843915 | Msa0058440:five_prime_UTR | 50.0% | |
! | TTCTGAGAACCCTCCTCTTC+GGG | - | chr1_2:14843908-14843927 | None:intergenic | 50.0% |
! | CTTCTGAGAACCCTCCTCTT+CGG | - | chr1_2:14843909-14843928 | None:intergenic | 50.0% |
GTTTCCACCCTAAACGTCCA+TGG | + | chr1_2:14844095-14844114 | Msa0058440:CDS | 50.0% | |
CGAGGATCCATGGACGTTTA+GGG | - | chr1_2:14844105-14844124 | None:intergenic | 50.0% | |
AAAGCTGAATGACGCCACTG+TGG | - | chr1_2:14844135-14844154 | None:intergenic | 50.0% | |
ACAGTGGCGTCATTCAGCTT+TGG | + | chr1_2:14844134-14844153 | Msa0058440:CDS | 50.0% | |
CAGTGGCGTCATTCAGCTTT+GGG | + | chr1_2:14844135-14844154 | Msa0058440:CDS | 50.0% | |
TGAAAATGAACCCCGCGAAC+GGG | - | chr1_2:14844208-14844227 | None:intergenic | 50.0% | |
GTGAAAATGAACCCCGCGAA+CGG | - | chr1_2:14844209-14844228 | None:intergenic | 50.0% | |
TCTCAACCTCTCTTCGTCTC+TGG | + | chr1_2:14844232-14844251 | Msa0058440:CDS | 50.0% | |
TTACCTCCAGAGACGAAGAG+AGG | - | chr1_2:14844241-14844260 | None:intergenic | 50.0% | |
TCACTCGCACTCACAATCCA+CGG | - | chr1_2:14844458-14844477 | None:intergenic | 50.0% | |
CTGCCAGTTCCAGATTCGAA+TGG | - | chr1_2:14844489-14844508 | None:intergenic | 50.0% | |
! | TCTTGTTGTGTCTGCGTCGT+TGG | + | chr1_2:14844583-14844602 | Msa0058440:CDS | 50.0% |
TGGATCAGACTGTTCGCGTT+TGG | + | chr1_2:14844603-14844622 | Msa0058440:CDS | 50.0% | |
GGATCAGACTGTTCGCGTTT+GGG | + | chr1_2:14844604-14844623 | Msa0058440:CDS | 50.0% | |
CACCGGCGGATGATATATTG+AGG | + | chr1_2:14844657-14844676 | Msa0058440:CDS | 50.0% | |
TTTGGAAGGTCATGATCGCG+GGG | + | chr1_2:14844736-14844755 | Msa0058440:CDS | 50.0% | |
GTCATGATCGCGGGGTTAAT+TGG | + | chr1_2:14844744-14844763 | Msa0058440:CDS | 50.0% | |
TCCGCAGCAGAGACAATAAG+GGG | - | chr1_2:14844791-14844810 | None:intergenic | 50.0% | |
CATCCGCAGCAGAGACAATA+AGG | - | chr1_2:14844793-14844812 | None:intergenic | 50.0% | |
TTGTCTCTGCTGCGGATGAT+AGG | + | chr1_2:14844795-14844814 | Msa0058440:CDS | 50.0% | |
TGGGAAGTGGACACTTTGAG+AGG | + | chr1_2:14845467-14845486 | Msa0058440:CDS | 50.0% | |
! | GGGAAGTGGACACTTTGAGA+GGG | + | chr1_2:14845468-14845487 | Msa0058440:CDS | 50.0% |
!! | GCCGAGAGCATGATAGGTTT+TGG | + | chr1_2:14845612-14845631 | Msa0058440:CDS | 50.0% |
ATCCCCACTAACCACAAAGG+CGG | - | chr1_2:14845723-14845742 | None:intergenic | 50.0% | |
GTACTTCCATTTCGACGACC+GGG | + | chr1_2:14845809-14845828 | Msa0058440:CDS | 50.0% | |
AAAGAACCCGGTCGTCGAAA+TGG | - | chr1_2:14845818-14845837 | None:intergenic | 50.0% | |
TTGGTGCACAAGCTTCTTGC+TGG | - | chr1_2:14846299-14846318 | None:intergenic | 50.0% | |
! | TTGTCTCGTGGAGAGTGCAT+TGG | - | chr1_2:14846318-14846337 | None:intergenic | 50.0% |
AGTGGAGCTTGGGATGACAA+TGG | + | chr1_2:14846349-14846368 | Msa0058440:CDS | 50.0% | |
ACAAAATGCAGGGCAACCTC+GGG | - | chr1_2:14846661-14846680 | None:intergenic | 50.0% | |
CACAAAATGCAGGGCAACCT+CGG | - | chr1_2:14846662-14846681 | None:intergenic | 50.0% | |
CGAAAGCTTCTCCAAGTTGC+CGG | - | chr1_2:14846886-14846905 | None:intergenic | 50.0% | |
GACGCAGCAACATAAGCAAG+AGG | - | chr1_2:14847023-14847042 | None:intergenic | 50.0% | |
TATGTTGCTGCGTCAGTGCA+TGG | + | chr1_2:14847029-14847048 | Msa0058440:three_prime_UTR | 50.0% | |
ATGTTGCTGCGTCAGTGCAT+GGG | + | chr1_2:14847030-14847049 | Msa0058440:three_prime_UTR | 50.0% | |
AAACGGCTTGCAGCTGAACT+AGG | + | chr1_2:14847068-14847087 | Msa0058440:three_prime_UTR | 50.0% | |
ATGTCCCATCTTTGCCTGAG+GGG | + | chr1_2:14847096-14847115 | Msa0058440:three_prime_UTR | 50.0% | |
CTTTCCCCTCAGGCAAAGAT+GGG | - | chr1_2:14847103-14847122 | None:intergenic | 50.0% | |
ACTTTCCCCTCAGGCAAAGA+TGG | - | chr1_2:14847104-14847123 | None:intergenic | 50.0% | |
!! | GAAGGAGGCATCAAGAGAGA+CGG | - | chr1_2:14847128-14847147 | None:intergenic | 50.0% |
CCGTCATGTGTGGAAGTGAT+TGG | + | chr1_2:14847150-14847169 | Msa0058440:three_prime_UTR | 50.0% | |
! | GAAGTGATTGGCCCCTTCTT+AGG | + | chr1_2:14847162-14847181 | Msa0058440:three_prime_UTR | 50.0% |
CCCCTTCTTAGGGTTATGCA+AGG | + | chr1_2:14847173-14847192 | Msa0058440:three_prime_UTR | 50.0% | |
! | TGCAAGGCATGTTTGATGGC+GGG | + | chr1_2:14847189-14847208 | Msa0058440:three_prime_UTR | 50.0% |
!! | GATGGCGGGTTTGACAATAC+AGG | + | chr1_2:14847203-14847222 | Msa0058440:three_prime_UTR | 50.0% |
GCGGGTTTGACAATACAGGT+CGG | + | chr1_2:14847207-14847226 | Msa0058440:three_prime_UTR | 50.0% | |
CGGGTTTGACAATACAGGTC+GGG | + | chr1_2:14847208-14847227 | Msa0058440:three_prime_UTR | 50.0% | |
GGGTTTGACAATACAGGTCG+GGG | + | chr1_2:14847209-14847228 | Msa0058440:three_prime_UTR | 50.0% | |
TGCTGATGAAGAAGAGGACG+AGG | + | chr1_2:14847235-14847254 | Msa0058440:three_prime_UTR | 50.0% | |
TGAAGAAGGTGGATGGGAGA+TGG | + | chr1_2:14847361-14847380 | Msa0058440:three_prime_UTR | 50.0% | |
!!! | AGCTTTTGGGGTGTCAGCTT+CGG | - | chr1_2:14847405-14847424 | None:intergenic | 50.0% |
GACACCCCAAAAGCTTCTGT+TGG | + | chr1_2:14847410-14847429 | Msa0058440:three_prime_UTR | 50.0% | |
TACTGGCATGCCAGTAGTTG+GGG | - | chr1_2:14847459-14847478 | None:intergenic | 50.0% | |
CTTACTGGCATGCCAGTAGT+TGG | - | chr1_2:14847461-14847480 | None:intergenic | 50.0% | |
GACGCAGAAATCGTCACTTG+CGG | + | chr1_2:14847490-14847509 | Msa0058440:three_prime_UTR | 50.0% | |
AGGTTGCTGAACCGACAACT+CGG | + | chr1_2:14847551-14847570 | Msa0058440:three_prime_UTR | 50.0% | |
!! | ACTTGAAAGGAAGTGCTGGG+GGG | - | chr1_2:14847724-14847743 | None:intergenic | 50.0% |
AAGAGCCTCGGTGAATTTCC+CGG | - | chr1_2:14847795-14847814 | None:intergenic | 50.0% | |
! | TGATTGTGGTGGAGTCAAGG+AGG | + | chr1_2:14847849-14847868 | Msa0058440:three_prime_UTR | 50.0% |
! | GATTGTGGTGGAGTCAAGGA+GGG | + | chr1_2:14847850-14847869 | Msa0058440:three_prime_UTR | 50.0% |
GAGGGAAGTGGATGATGTGA+AGG | + | chr1_2:14847868-14847887 | Msa0058440:three_prime_UTR | 50.0% | |
GTTTGCAGATCGAGCTGAAG+AGG | + | chr1_2:14847924-14847943 | Msa0058440:three_prime_UTR | 50.0% | |
GGACAATCCAGTAAGACAGC+AGG | + | chr1_2:14847958-14847977 | Msa0058440:three_prime_UTR | 50.0% | |
GCCAATCTATCGAGGACAGA+AGG | + | chr1_2:14848249-14848268 | Msa0058440:three_prime_UTR | 50.0% | |
! | TTCACGTTTTGTGCCAACCC+AGG | + | chr1_2:14848294-14848313 | Msa0058440:three_prime_UTR | 50.0% |
! | ACAGAGCAGTCCAGAAGCAT+CGG | - | chr1_2:14848362-14848381 | None:intergenic | 50.0% |
CGTATATGCTCCCGAAGAGG+AGG | + | chr1_2:14843895-14843914 | Msa0058440:five_prime_UTR | 55.0% | |
CGAAGAGGAGGGTTCTCAGA+AGG | + | chr1_2:14843907-14843926 | Msa0058440:five_prime_UTR | 55.0% | |
GGATCCATGGACGTTTAGGG+TGG | - | chr1_2:14844102-14844121 | None:intergenic | 55.0% | |
GCGAGGATCCATGGACGTTT+AGG | - | chr1_2:14844106-14844125 | None:intergenic | 55.0% | |
TGGAGACTAGCGAGGATCCA+TGG | - | chr1_2:14844115-14844134 | None:intergenic | 55.0% | |
! | ATCCTCGCTAGTCTCCACAG+TGG | + | chr1_2:14844118-14844137 | Msa0058440:CDS | 55.0% |
CAACCTCTCTTCGTCTCTGG+AGG | + | chr1_2:14844235-14844254 | Msa0058440:CDS | 55.0% | |
!! | AAGGAAGAGTGCTTCACCGG+CGG | + | chr1_2:14844643-14844662 | Msa0058440:CDS | 55.0% |
GCCCCTTATTGTCTCTGCTG+CGG | + | chr1_2:14844787-14844806 | Msa0058440:CDS | 55.0% | |
TGGGATGCAACAAAGCGGAC+TGG | + | chr1_2:14845575-14845594 | Msa0058440:CDS | 55.0% | |
! | CATTCCGCCGAGAGCATGAT+AGG | + | chr1_2:14845606-14845625 | Msa0058440:CDS | 55.0% |
GAGAGAAAGACCCGCCTTTG+TGG | + | chr1_2:14845709-14845728 | Msa0058440:CDS | 55.0% | |
AGACCCGCCTTTGTGGTTAG+TGG | + | chr1_2:14845716-14845735 | Msa0058440:CDS | 55.0% | |
GACCCGCCTTTGTGGTTAGT+GGG | + | chr1_2:14845717-14845736 | Msa0058440:CDS | 55.0% | |
ACCCGCCTTTGTGGTTAGTG+GGG | + | chr1_2:14845718-14845737 | Msa0058440:CDS | 55.0% | |
TCCCCACTAACCACAAAGGC+GGG | - | chr1_2:14845722-14845741 | None:intergenic | 55.0% | |
CAAAATGCAGGGCAACCTCG+GGG | - | chr1_2:14846660-14846679 | None:intergenic | 55.0% | |
CTGGTATCGCTTAGGAGTCG+AGG | + | chr1_2:14846774-14846793 | Msa0058440:CDS | 55.0% | |
GCTCTTCGCCAAGGTAATGC+TGG | + | chr1_2:14846796-14846815 | Msa0058440:CDS | 55.0% | |
AGAGACGGTACTTTCCCCTC+AGG | - | chr1_2:14847113-14847132 | None:intergenic | 55.0% | |
!! | CTTCCACACATGACGGGTGA+AGG | - | chr1_2:14847146-14847165 | None:intergenic | 55.0% |
AGAAGGTGGATGGGAGATGG+AGG | + | chr1_2:14847364-14847383 | Msa0058440:three_prime_UTR | 55.0% | |
!!! | CTTTTGGGGTGTCAGCTTCG+GGG | - | chr1_2:14847403-14847422 | None:intergenic | 55.0% |
!!! | GCTTTTGGGGTGTCAGCTTC+GGG | - | chr1_2:14847404-14847423 | None:intergenic | 55.0% |
ACTGGCATGCCAGTAGTTGG+GGG | - | chr1_2:14847458-14847477 | None:intergenic | 55.0% | |
GGTTGCTGAACCGACAACTC+GGG | + | chr1_2:14847552-14847571 | Msa0058440:three_prime_UTR | 55.0% | |
TACTGCCGGGAAATTCACCG+AGG | + | chr1_2:14847787-14847806 | Msa0058440:three_prime_UTR | 55.0% | |
GCAAGCTCCTGCTGTCTTAC+TGG | - | chr1_2:14847968-14847987 | None:intergenic | 55.0% | |
ACCTTCAGGCACCTCACTTG+AGG | + | chr1_2:14848008-14848027 | Msa0058440:three_prime_UTR | 55.0% | |
! | ACCTCAAGTGAGGTGCCTGA+AGG | - | chr1_2:14848012-14848031 | None:intergenic | 55.0% |
CCTCCTAGCGAAGTTAGCAG+CGG | - | chr1_2:14848086-14848105 | None:intergenic | 55.0% | |
! | CTTGCCTTGCTGTCTTCGCT+TGG | - | chr1_2:14848138-14848157 | None:intergenic | 55.0% |
GAAGACAGCAAGGCAAGTGC+TGG | + | chr1_2:14848141-14848160 | Msa0058440:three_prime_UTR | 55.0% | |
! | ACGTTTTGTGCCAACCCAGG+AGG | + | chr1_2:14848297-14848316 | Msa0058440:three_prime_UTR | 55.0% |
! | CGTTTTGTGCCAACCCAGGA+GGG | + | chr1_2:14848298-14848317 | Msa0058440:three_prime_UTR | 55.0% |
! | GTTTTGTGCCAACCCAGGAG+GGG | + | chr1_2:14848299-14848318 | Msa0058440:three_prime_UTR | 55.0% |
AGTACAAAGCTGCCCCTCCT+GGG | - | chr1_2:14848314-14848333 | None:intergenic | 55.0% | |
!! | GTTGTAGGTGCCGATGCTTC+TGG | + | chr1_2:14848349-14848368 | Msa0058440:three_prime_UTR | 55.0% |
ACTGCTCTGTTCACCTTCCC+AGG | + | chr1_2:14848372-14848391 | Msa0058440:three_prime_UTR | 55.0% | |
CTCAATCAGCGTACCTGGGA+AGG | - | chr1_2:14848388-14848407 | None:intergenic | 55.0% | |
AATCGGGGGCTTCAGTGACT+TGG | + | chr1_2:14848733-14848752 | Msa0058440:three_prime_UTR | 55.0% | |
! | TTAGCGGCTGGTCACGACAG+TGG | + | chr1_2:14845665-14845684 | Msa0058440:CDS | 60.0% |
TCAACAGAAGGGCTTCCCCG+AGG | + | chr1_2:14846642-14846661 | Msa0058440:CDS | 60.0% | |
TGCTGCGTCAGTGCATGGGT+TGG | + | chr1_2:14847034-14847053 | Msa0058440:three_prime_UTR | 60.0% | |
!! | CCACACATGACGGGTGAAGG+AGG | - | chr1_2:14847143-14847162 | None:intergenic | 60.0% |
CCTCCTTCACCCGTCATGTG+TGG | + | chr1_2:14847140-14847159 | Msa0058440:three_prime_UTR | 60.0% | |
GAAGAGGACGAGGCTCCTGA+TGG | + | chr1_2:14847245-14847264 | Msa0058440:three_prime_UTR | 60.0% | |
CTGGCATGCCAGTAGTTGGG+GGG | - | chr1_2:14847457-14847476 | None:intergenic | 60.0% | |
ACTTGCGGCAGAGCATGCAG+CGG | + | chr1_2:14847505-14847524 | Msa0058440:three_prime_UTR | 60.0% | |
GGTGGAGTCAAGGAGGGAAG+TGG | + | chr1_2:14847856-14847875 | Msa0058440:three_prime_UTR | 60.0% | |
CGAAGTTAGCAGCGGTGGCA+AGG | - | chr1_2:14848078-14848097 | None:intergenic | 60.0% | |
CCTAGCGAAGTTAGCAGCGG+TGG | - | chr1_2:14848083-14848102 | None:intergenic | 60.0% | |
CCACCGCTGCTAACTTCGCT+AGG | + | chr1_2:14848080-14848099 | Msa0058440:three_prime_UTR | 60.0% | |
CCGCTGCTAACTTCGCTAGG+AGG | + | chr1_2:14848083-14848102 | Msa0058440:three_prime_UTR | 60.0% | |
CAGTACAAAGCTGCCCCTCC+TGG | - | chr1_2:14848315-14848334 | None:intergenic | 60.0% | |
CGCCACTGTGGAGACTAGCG+AGG | - | chr1_2:14844123-14844142 | None:intergenic | 65.0% | |
GAACACGACGGTCCCGTTCG+CGG | + | chr1_2:14844193-14844212 | Msa0058440:CDS | 65.0% | |
AACACGACGGTCCCGTTCGC+GGG | + | chr1_2:14844194-14844213 | Msa0058440:CDS | 65.0% | |
GGAGTCGAGGCTCTTCGCCA+AGG | + | chr1_2:14846787-14846806 | Msa0058440:CDS | 65.0% | |
! | ACGAGGCTCCTGATGGCGAC+TGG | + | chr1_2:14847252-14847271 | Msa0058440:three_prime_UTR | 65.0% |
! | CGAGGCTCCTGATGGCGACT+GGG | + | chr1_2:14847253-14847272 | Msa0058440:three_prime_UTR | 65.0% |
! | GAGGCTCCTGATGGCGACTG+GGG | + | chr1_2:14847254-14847273 | Msa0058440:three_prime_UTR | 65.0% |
! | TCCTGATGGCGACTGGGGTG+AGG | + | chr1_2:14847259-14847278 | Msa0058440:three_prime_UTR | 65.0% |
TCCTCACCCCAGTCGCCATC+AGG | - | chr1_2:14847263-14847282 | None:intergenic | 65.0% | |
!! | AAGGCAAGTGCTGGCAGCCG+CGG | + | chr1_2:14848150-14848169 | Msa0058440:three_prime_UTR | 65.0% |
CAAAGCTGCCCCTCCTGGGT+TGG | - | chr1_2:14848310-14848329 | None:intergenic | 65.0% | |
ACACGACGGTCCCGTTCGCG+GGG | + | chr1_2:14844195-14844214 | Msa0058440:CDS | 70.0% | |
GCGGCAGAGCATGCAGCGGC+TGG | + | chr1_2:14847509-14847528 | Msa0058440:three_prime_UTR | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 14843871 | 14848806 | 14843871 | ID=Msa0058440;Name=Msa0058440 |
chr1_2 | mRNA | 14843871 | 14848806 | 14843871 | ID=Msa0058440-mRNA-1;Parent=Msa0058440;Name=Msa0058440-mRNA-1;_AED=0.01;_eAED=0.01;_QI=178|1|1|1|1|1|3|1924|709 |
chr1_2 | exon | 14843871 | 14844256 | 14843871 | ID=Msa0058440-mRNA-1:exon:5998;Parent=Msa0058440-mRNA-1 |
chr1_2 | exon | 14844348 | 14844842 | 14844348 | ID=Msa0058440-mRNA-1:exon:5999;Parent=Msa0058440-mRNA-1 |
chr1_2 | exon | 14845456 | 14848806 | 14845456 | ID=Msa0058440-mRNA-1:exon:6000;Parent=Msa0058440-mRNA-1 |
chr1_2 | five_prime_UTR | 14843871 | 14844048 | 14843871 | ID=Msa0058440-mRNA-1:five_prime_utr;Parent=Msa0058440-mRNA-1 |
chr1_2 | CDS | 14844049 | 14844256 | 14844049 | ID=Msa0058440-mRNA-1:cds;Parent=Msa0058440-mRNA-1 |
chr1_2 | CDS | 14844348 | 14844842 | 14844348 | ID=Msa0058440-mRNA-1:cds;Parent=Msa0058440-mRNA-1 |
chr1_2 | CDS | 14845456 | 14846882 | 14845456 | ID=Msa0058440-mRNA-1:cds;Parent=Msa0058440-mRNA-1 |
chr1_2 | three_prime_UTR | 14846883 | 14848806 | 14846883 | ID=Msa0058440-mRNA-1:three_prime_utr;Parent=Msa0058440-mRNA-1 |
Gene Sequence |
Protein sequence |