AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0182520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0182520 MtrunA17_Chr1g0209451 99.535 430 1 1 1 430 1 429 0.0 871
Msa0182520 MtrunA17_Chr7g0271971 72.749 411 110 2 15 425 14 422 0.0 592
Msa0182520 MtrunA17_Chr1g0192471 70.388 412 118 3 14 423 13 422 0.0 570
Msa0182520 MtrunA17_Chr1g0153671 60.048 418 161 4 8 423 4 417 0.0 527
Msa0182520 MtrunA17_Chr3g0133801 58.726 424 166 5 6 425 3 421 3.24e-180 509
Msa0182520 MtrunA17_Chr7g0225501 57.783 424 150 11 15 424 32 440 2.67e-146 424
Msa0182520 MtrunA17_Chr2g0326251 57.399 223 74 9 110 321 7 219 2.66e-63 203
Msa0182520 MtrunA17_Chr1g0150451 31.984 247 144 9 58 299 97 324 6.53e-27 110
Msa0182520 MtrunA17_Chr1g0212961 33.577 274 146 15 36 300 93 339 3.43e-26 108
Msa0182520 MtrunA17_Chr3g0136711 31.557 244 143 9 58 296 54 278 2.50e-25 105
Msa0182520 MtrunA17_Chr4g0070871 29.392 296 153 10 47 298 220 503 3.92e-23 101
Msa0182520 MtrunA17_Chr3g0105351 28.517 263 158 10 44 298 74 314 1.42e-22 97.8
Msa0182520 MtrunA17_Chr3g0126511 33.333 255 141 11 47 296 108 338 7.32e-22 96.3
Msa0182520 MtrunA17_Chr3g0105371 28.897 263 157 10 44 298 98 338 1.24e-21 95.5
Msa0182520 MtrunA17_Chr5g0430481 26.394 269 173 8 38 298 123 374 1.13e-20 93.2
Msa0182520 MtrunA17_Chr8g0360351 28.627 255 153 10 47 296 49 279 4.28e-20 89.7
Msa0182520 MtrunA17_Chr2g0317021 27.344 256 159 7 47 298 100 332 7.92e-20 90.1
Msa0182520 MtrunA17_Chr2g0279151 28.814 236 142 8 67 296 63 278 1.59e-19 88.2
Msa0182520 MtrunA17_Chr5g0396731 31.731 208 121 6 67 266 105 299 2.36e-19 89.0
Msa0182520 MtrunA17_Chr1g0194191 30.943 265 150 12 68 314 117 366 5.48e-19 88.2
Msa0182520 MtrunA17_Chr3g0115851 29.915 234 138 8 69 296 66 279 1.25e-18 85.9
Msa0182520 MtrunA17_Chr4g0050381 27.039 233 146 7 69 296 61 274 1.31e-18 85.5
Msa0182520 MtrunA17_Chr5g0426141 30.472 233 138 8 69 296 66 279 3.76e-18 84.3
Msa0182520 MtrunA17_Chr2g0299981 26.837 313 157 9 47 298 234 535 4.43e-18 86.7
Msa0182520 MtrunA17_Chr1g0150781 30.147 272 132 12 70 300 291 545 1.12e-17 85.1
Msa0182520 MtrunA17_Chr3g0135961 29.044 272 145 9 63 298 280 539 6.10e-17 83.2
Msa0182520 MtrunA17_Chr8g0389921 27.969 261 155 9 60 298 185 434 2.51e-16 80.9
Msa0182520 MtrunA17_Chr1g0171571 30.488 246 138 7 70 300 419 646 2.74e-16 81.3
Msa0182520 MtrunA17_Chr4g0051661 30.802 237 131 10 69 296 183 395 8.48e-16 79.0
Msa0182520 MtrunA17_Chr6g0483411 30.605 281 142 15 47 296 58 316 1.66e-15 77.0
Msa0182520 MtrunA17_Chr3g0112291 29.032 217 122 6 62 261 116 317 2.10e-15 77.4
Msa0182520 MtrunA17_Chr4g0065141 27.106 273 153 11 66 318 121 367 2.91e-14 73.9
Msa0182520 MtrunA17_Chr1g0158781 29.960 247 142 8 70 298 146 379 7.76e-14 72.8
Msa0182520 MtrunA17_Chr3g0127091 26.712 292 153 10 62 307 82 358 8.29e-14 72.8
Msa0182520 MtrunA17_Chr5g0435721 28.019 207 123 7 70 263 224 417 1.93e-13 72.0
Msa0182520 MtrunA17_Chr4g0001761 24.233 326 156 13 66 316 49 358 2.96e-13 70.9
Msa0182520 MtrunA17_Chr3g0138281 29.008 262 139 12 68 307 120 356 1.58e-12 68.6
Msa0182520 MtrunA17_Chr3g0136811 32.394 142 69 5 129 259 156 281 3.24e-12 67.8
Msa0182520 MtrunA17_Chr6g0486661 27.019 322 169 16 24 298 79 381 1.29e-11 67.0
Msa0182520 MtrunA17_Chr7g0272061 30.964 197 111 10 132 309 182 372 1.36e-11 65.9
Msa0182520 MtrunA17_Chr5g0394181 28.627 255 142 13 67 298 360 597 3.14e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0182520 AT1G68410.4 80.275 436 78 5 1 429 1 435 0.0 700
Msa0182520 AT1G68410.3 80.275 436 78 5 1 429 1 435 0.0 700
Msa0182520 AT1G68410.1 80.275 436 78 5 1 429 1 435 0.0 700
Msa0182520 AT1G68410.2 80.275 436 78 5 1 429 1 435 0.0 700
Msa0182520 AT1G09160.2 71.084 415 118 2 11 425 10 422 0.0 593
Msa0182520 AT1G09160.1 71.084 415 118 2 11 425 10 422 0.0 593
Msa0182520 AT1G47380.1 63.133 415 152 1 12 426 7 420 0.0 540
Msa0182520 AT4G26080.1 30.798 263 139 7 70 300 173 424 8.31e-25 106
Msa0182520 AT4G31750.2 31.557 244 143 9 58 296 53 277 1.25e-24 103
Msa0182520 AT4G31750.1 31.557 244 143 9 58 296 53 277 1.31e-24 103
Msa0182520 AT4G31750.3 31.557 244 143 9 58 296 53 277 1.31e-24 103
Msa0182520 AT5G10740.1 30.980 255 147 10 47 296 47 277 1.83e-24 103
Msa0182520 AT5G10740.2 30.980 255 147 10 47 296 47 277 1.83e-24 103
Msa0182520 AT1G78200.5 32.946 258 141 12 47 296 2 235 3.01e-24 100
Msa0182520 AT1G78200.4 32.946 258 141 12 47 296 2 235 3.01e-24 100
Msa0182520 AT1G67820.2 32.735 223 128 9 43 261 89 293 4.70e-24 103
Msa0182520 AT1G67820.1 32.735 223 128 9 43 261 125 329 6.65e-24 103
Msa0182520 AT1G78200.1 32.946 258 141 12 47 296 47 280 9.29e-24 100
Msa0182520 AT1G78200.3 32.946 258 141 12 47 296 47 280 9.29e-24 100
Msa0182520 AT1G78200.2 32.946 258 141 12 47 296 47 280 9.29e-24 100
Msa0182520 AT1G34750.2 31.250 256 145 10 47 296 49 279 1.07e-23 100
Msa0182520 AT1G34750.1 31.250 256 145 10 47 296 49 279 1.07e-23 100
Msa0182520 AT1G34750.3 31.250 256 145 10 47 296 49 279 1.07e-23 100
Msa0182520 AT5G57050.2 29.259 270 147 8 62 298 113 371 1.52e-23 102
Msa0182520 AT5G53140.1 30.303 264 157 9 47 306 115 355 1.85e-23 102
Msa0182520 AT5G53140.2 30.303 264 157 9 47 306 115 355 1.85e-23 102
Msa0182520 AT5G57050.1 29.259 270 147 8 62 298 153 411 2.43e-23 102
Msa0182520 AT5G24940.1 30.588 255 148 10 47 296 47 277 3.34e-23 101
Msa0182520 AT1G43900.1 30.182 275 153 12 34 296 119 366 3.98e-23 100
Msa0182520 AT1G22280.3 30.472 233 144 7 69 296 65 284 4.12e-23 99.0
Msa0182520 AT1G07160.1 28.364 275 163 10 38 298 122 376 4.34e-23 100
Msa0182520 AT2G34740.1 31.907 257 148 11 47 299 102 335 1.67e-22 98.2
Msa0182520 AT2G40180.1 28.571 245 155 7 68 306 160 390 3.12e-22 98.2
Msa0182520 AT1G22280.1 30.213 235 140 7 67 296 63 278 6.92e-22 95.5
Msa0182520 AT4G28400.3 27.165 254 158 8 47 296 28 258 4.70e-20 89.7
Msa0182520 AT2G20630.1 26.667 255 158 10 47 296 46 276 4.73e-20 90.1
Msa0182520 AT4G28400.1 27.165 254 158 8 47 296 50 280 6.61e-20 89.7
Msa0182520 AT2G20630.2 26.378 254 158 10 47 295 46 275 2.81e-19 88.2
Msa0182520 AT2G40860.1 30.450 289 153 10 33 300 389 650 3.29e-19 90.5
Msa0182520 AT2G30020.1 28.216 241 146 9 68 298 169 392 3.40e-19 89.4
Msa0182520 AT3G51470.2 30.225 311 160 17 32 317 24 302 4.18e-19 88.2
Msa0182520 AT2G40860.4 30.450 289 153 10 33 300 291 552 4.55e-19 90.1
Msa0182520 AT3G51470.1 30.225 311 160 17 32 317 68 346 7.30e-19 88.2
Msa0182520 AT2G40860.2 30.894 246 125 8 33 259 389 608 9.46e-18 86.3
Msa0182520 AT2G34740.2 29.911 224 134 7 51 271 118 321 1.24e-17 84.0
Msa0182520 AT2G34740.3 29.018 224 136 6 51 271 100 303 1.45e-17 83.6
Msa0182520 AT1G34750.4 29.717 212 120 8 47 253 49 236 4.69e-17 80.9
Msa0182520 AT3G15260.2 27.559 254 157 8 47 296 56 286 4.79e-17 81.6
Msa0182520 AT3G15260.1 27.559 254 157 8 47 296 56 286 4.79e-17 81.6
Msa0182520 AT1G48040.1 29.193 322 181 14 33 328 75 375 5.36e-17 82.8
Msa0182520 AT2G25620.1 29.630 270 132 13 68 312 127 363 1.10e-16 82.0
Msa0182520 AT2G25620.2 29.630 270 132 13 68 312 127 363 1.10e-16 82.0
Msa0182520 AT3G62260.3 29.091 275 142 11 68 314 26 275 1.98e-16 79.7
Msa0182520 AT1G18030.1 29.528 254 135 9 70 296 110 346 4.24e-16 79.7
Msa0182520 AT3G62260.2 29.348 276 140 12 68 314 116 365 1.04e-15 79.0
Msa0182520 AT3G62260.1 29.348 276 140 12 68 314 115 364 1.06e-15 79.0
Msa0182520 AT1G17550.1 27.599 279 137 11 70 298 238 501 5.52e-15 77.4
Msa0182520 AT1G17550.2 27.599 279 137 11 70 298 238 501 5.52e-15 77.4
Msa0182520 AT1G72770.4 26.978 278 139 11 70 298 239 501 5.87e-15 77.0
Msa0182520 AT1G72770.1 26.978 278 139 11 70 298 239 501 5.87e-15 77.0
Msa0182520 AT1G72770.3 26.978 278 139 11 70 298 239 501 5.87e-15 77.0
Msa0182520 AT1G07430.1 28.507 221 125 7 63 266 151 355 9.97e-15 76.3
Msa0182520 AT3G11410.1 27.679 224 121 7 63 261 131 338 1.18e-13 72.8
Msa0182520 AT5G27930.1 26.804 291 169 12 43 295 66 350 3.89e-13 70.9
Msa0182520 AT5G27930.2 26.804 291 169 12 43 295 66 350 3.89e-13 70.9
Msa0182520 AT5G51760.2 26.984 252 142 8 42 266 87 323 8.28e-13 70.1
Msa0182520 AT5G57050.3 31.138 167 97 6 62 221 153 308 9.84e-13 69.3
Msa0182520 AT5G51760.1 26.984 252 142 8 42 266 117 353 1.29e-12 69.7
Msa0182520 AT5G59220.1 29.167 216 127 8 63 266 142 343 1.61e-12 69.3
Msa0182520 AT1G18030.2 29.952 207 106 8 70 254 110 299 3.65e-12 67.4
Msa0182520 AT2G40860.3 30.088 226 113 8 33 239 389 588 5.32e-12 68.2
Msa0182520 AT3G05640.2 29.388 245 138 13 72 288 96 333 2.55e-11 65.1
Msa0182520 AT3G05640.1 29.388 245 138 13 72 288 96 333 2.55e-11 65.1
Msa0182520 AT3G05640.3 29.388 245 138 13 72 288 96 333 2.55e-11 65.1

Find 152 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTAACCCTCTTGTTCTT+AGG 0.128917 1_4:-71091527 None:intergenic
TAATTGCTTCTGATGGAATA+TGG 0.192465 1_4:+71091317 Msa0182520:CDS
TGTGCTCTTCCTCGAGGGCT+TGG 0.273865 1_4:+71090376 Msa0182520:CDS
CCTAAGAACAAGAGGGTTAA+AGG 0.275358 1_4:+71091527 Msa0182520:CDS
TTACCTAGGGCGTTGGTTGC+TGG 0.278710 1_4:+71090421 Msa0182520:CDS
TTAAGAGGAGGACTACTATT+TGG 0.300461 1_4:+71089939 Msa0182520:five_prime_UTR
CTTTAACCCTCTTGTTCTTA+GGG 0.310359 1_4:-71091526 None:intergenic
TCTGGTTCACAGATCTTTGA+TGG 0.328672 1_4:+71090295 Msa0182520:intron
GTTTATATATACAGGAAGTT+GGG 0.331752 1_4:-71093635 None:intergenic
TATGATCAAGCCAGCTTTCA+AGG 0.336075 1_4:-71089197 None:intergenic
GTTGGTGGCAATTCGTTATC+AGG 0.338618 1_4:-71091585 None:intergenic
TAATCAAGATTATTCCGATT+TGG 0.348898 1_4:-71093599 None:intergenic
ACTGATTGTCAGCGTGTTCC+CGG 0.350328 1_4:+71090132 Msa0182520:CDS
GAATTACCAGTGAGAATGTT+TGG 0.357677 1_4:-71089517 None:intergenic
TACCTGATTGTTAGAGTTTG+AGG 0.364727 1_4:+71093510 Msa0182520:three_prime_UTR
GATTAAAAGTTTATATATAC+AGG 0.367726 1_4:-71093643 None:intergenic
GTGCTCTTCCTCGAGGGCTT+GGG 0.375439 1_4:+71090377 Msa0182520:CDS
AGTTTATATATACAGGAAGT+TGG 0.379287 1_4:-71093636 None:intergenic
ACCTTCACTTGTTTGACATA+AGG 0.398711 1_4:-71091157 None:intergenic
TAATTTGGTTTGAGATTAAG+AGG 0.402388 1_4:+71089924 Msa0182520:five_prime_UTR
AGAGATGAAAAGTGAGAAGA+TGG 0.405375 1_4:+71090041 Msa0182520:CDS
CTATGCCTTTCAAGGTCAAT+AGG 0.410238 1_4:+71091100 Msa0182520:CDS
GTGGAAGAATTGTTTGAAGA+AGG 0.414819 1_4:+71091714 Msa0182520:CDS
ACCTGATTGTTAGAGTTTGA+GGG 0.419884 1_4:+71093511 Msa0182520:three_prime_UTR
CTATTTGGTGGAGTAAGATA+TGG 0.420137 1_4:+71089954 Msa0182520:exon
ACTTGTTTGACATAAGGTAT+TGG 0.425889 1_4:-71091151 None:intergenic
TGCCGAACTTGCTGCTATGC+AGG 0.428289 1_4:+71091387 Msa0182520:CDS
GAGAAGCCTACTGTAAGAAT+TGG 0.429166 1_4:+71090063 Msa0182520:CDS
CCAAAAGTAAAACACTCAAA+AGG 0.430663 1_4:-71089857 None:intergenic
AACTCGGGGCAATCAACATC+TGG 0.433595 1_4:+71093135 Msa0182520:CDS
AAACGACGTTGAAGAGTTCC+CGG 0.433785 1_4:-71090151 None:intergenic
TAAGCTGTCGAAGAAGCTTT+CGG 0.444989 1_4:+71091680 Msa0182520:CDS
CAGGAGGTCTATGCCTTTCA+AGG 0.453251 1_4:+71091092 Msa0182520:CDS
AGACTTATAATTGCTTCTGA+TGG 0.454700 1_4:+71091310 Msa0182520:CDS
TGCTGCTGCTGTTTATACTA+AGG 0.456471 1_4:+71090330 Msa0182520:CDS
TGGATTTGTTAAGACTGATA+AGG 0.457043 1_4:+71090441 Msa0182520:CDS
TGCTTAATGTGCCACCAAAT+CGG 0.459210 1_4:+71093585 Msa0182520:three_prime_UTR
AACCTGCATAGCAGCAAGTT+CGG 0.460496 1_4:-71091389 None:intergenic
TGGCCTCCGGTGAAGGGAGG+CGG 0.465495 1_4:+71089974 Msa0182520:CDS
ACCCTCAAACTCTAACAATC+AGG 0.469199 1_4:-71093512 None:intergenic
TGCTGCTATGCAGGTTGTAA+AGG 0.471653 1_4:+71091396 Msa0182520:CDS
GACCTCCTGGCCAGCATCGA+AGG 0.472439 1_4:-71091078 None:intergenic
AATTGCTTCTGATGGAATAT+GGG 0.474848 1_4:+71091318 Msa0182520:CDS
GGTCCCCTTCGATGCTGGCC+AGG 0.475255 1_4:+71091073 Msa0182520:CDS
TAGTCTATGATCAACTGTTA+AGG 0.478725 1_4:-71090733 None:intergenic
GGATGCTGTATCATCAGAAC+TGG 0.480880 1_4:+71091339 Msa0182520:CDS
AGATTGGTCCCCTTCGATGC+TGG 0.482698 1_4:+71091068 Msa0182520:intron
GTGCAGGCCTCTCTTCCTCC+AGG 0.484670 1_4:-71093454 None:intergenic
GTTGGTAGGCTTAGCATTGT+CGG 0.485201 1_4:+71090892 Msa0182520:CDS
TTGCCATGGCTTCGAACTTG+TGG 0.487147 1_4:-71093235 None:intergenic
TGGACGGATATGCCCTCGCT+TGG 0.492365 1_4:-71093195 None:intergenic
CAAGCTGCTCAATCTAAGAA+AGG 0.493673 1_4:+71090087 Msa0182520:CDS
TCAATAGGAGACATGGATGT+TGG 0.494506 1_4:+71091115 Msa0182520:CDS
AAGCTGCTCAATCTAAGAAA+GGG 0.500245 1_4:+71090088 Msa0182520:CDS
TGGAGTGAAAGTGTCATAGT+AGG 0.506982 1_4:+71093320 Msa0182520:exon
TGCATAGCAGCAAGTTCGGC+AGG 0.507672 1_4:-71091385 None:intergenic
CGACAATCACAACATAGAAA+AGG 0.508453 1_4:-71093261 None:intergenic
CAAAAGTAAAACACTCAAAA+GGG 0.511652 1_4:-71089856 None:intergenic
TCAAGATTATTCCGATTTGG+TGG 0.511821 1_4:-71093596 None:intergenic
ATGATGCCGCCTCCCTTCAC+CGG 0.516244 1_4:-71089980 None:intergenic
TCTCCACAAGTTCGAAGCCA+TGG 0.517653 1_4:+71093232 Msa0182520:CDS
TAAGATATGGCCTCCGGTGA+AGG 0.520359 1_4:+71089967 Msa0182520:exon
AACTATCACAAATGTGGCTG+TGG 0.524845 1_4:-71090634 None:intergenic
TGCTGTGTGCTCTTCCTCGA+GGG 0.526725 1_4:+71090371 Msa0182520:CDS
CTTGAAAGGCATAGACCTCC+TGG 0.529945 1_4:-71091091 None:intergenic
AAAAGGTCCCGTGATACTGC+TGG 0.531393 1_4:+71091657 Msa0182520:CDS
ATAATCTTGATTAACTATGC+AGG 0.532405 1_4:+71093609 Msa0182520:three_prime_UTR
GCAAGCTTTACCTAGGGCGT+TGG 0.533024 1_4:+71090414 Msa0182520:CDS
CTGATTGTCAGCGTGTTCCC+GGG 0.534330 1_4:+71090133 Msa0182520:CDS
ATCAAGCCAGCTTTCAAGGA+TGG 0.536446 1_4:-71089193 None:intergenic
TGAGGGTGTATTAGTAAGCA+AGG 0.537686 1_4:+71089131 Msa0182520:five_prime_UTR
ACCTCCTGGCCAGCATCGAA+GGG 0.540520 1_4:-71091077 None:intergenic
AGAGGAGGACTACTATTTGG+TGG 0.541438 1_4:+71089942 Msa0182520:five_prime_UTR
TGTCTCCTATTGACCTTGAA+AGG 0.545734 1_4:-71091105 None:intergenic
GAAAATTGAACCTGCGTGGA+CGG 0.545829 1_4:-71093211 None:intergenic
GGTGGCAATTCGTTATCAGG+TGG 0.548447 1_4:-71091582 None:intergenic
TCTCTGTTTCCTTTGCCTAG+AGG 0.548962 1_4:-71089065 None:intergenic
GCTTGACCAATTCTTACAGT+AGG 0.550389 1_4:-71090069 None:intergenic
AGGGAACGTGTTACTGCAAG+TGG 0.553158 1_4:+71090862 Msa0182520:CDS
TTAGGAAATGATGAAAACTC+GGG 0.553371 1_4:+71093120 Msa0182520:CDS
CACATTCCAAACATTCTCAC+TGG 0.556658 1_4:+71089511 Msa0182520:five_prime_UTR
AGTGGTTGCAAGCTTTACCT+AGG 0.559227 1_4:+71090407 Msa0182520:CDS
CTCTTAAGCAATGCAGCAAG+AGG 0.562992 1_4:-71090018 None:intergenic
GTGGCAATTCGTTATCAGGT+GGG 0.563887 1_4:-71091581 None:intergenic
CAGCTTACCAGCAGTATCAC+GGG 0.564104 1_4:-71091664 None:intergenic
CTTGATCTTGCTCCAAGCGA+GGG 0.564745 1_4:+71093183 Msa0182520:CDS
GTGGAGTAAGATATGGCCTC+CGG 0.564989 1_4:+71089961 Msa0182520:exon
AGGTGGTCACAGCACCACCC+TGG 0.566912 1_4:-71090713 None:intergenic
GGTGGTCACAGCACCACCCT+GGG 0.567135 1_4:-71090712 None:intergenic
TTTATATATACAGGAAGTTG+GGG 0.568493 1_4:-71093634 None:intergenic
ACTGCAAGTGGAGGTGAAGT+TGG 0.568657 1_4:+71090874 Msa0182520:CDS
TTGTGATTGTCGCGATAAGA+AGG 0.569451 1_4:+71093272 Msa0182520:CDS
TACATGTAGATTCTGTTCCA+AGG 0.572083 1_4:-71089265 None:intergenic
TGAGGGTTAAGATCAGTGTG+AGG 0.573240 1_4:+71093528 Msa0182520:three_prime_UTR
ACTGTGACCTGGAGGAAGAG+AGG 0.574921 1_4:+71093447 Msa0182520:three_prime_UTR
CAAGTGGAGGTGAAGTTGGT+AGG 0.576583 1_4:+71090878 Msa0182520:CDS
AAGATATGGCCTCCGGTGAA+GGG 0.577203 1_4:+71089968 Msa0182520:exon
ATTAGGAAATGATGAAAACT+CGG 0.579096 1_4:+71093119 Msa0182520:CDS
GAGGGCTTGGGCGAGACGAG+TGG 0.581649 1_4:+71090389 Msa0182520:CDS
GCTTTCGGCTATAAATATTG+TGG 0.581725 1_4:+71091695 Msa0182520:CDS
CCACATTTGTGATAGTTGAT+CGG 0.583822 1_4:+71090640 Msa0182520:CDS
CCCCTTCGATGCTGGCCAGG+AGG 0.584688 1_4:+71091076 Msa0182520:CDS
GATAAGAAGGATGCAATGGA+AGG 0.584937 1_4:+71093285 Msa0182520:CDS
AATCCAGCAACCAACGCCCT+AGG 0.587420 1_4:-71090424 None:intergenic
ACAGCTTACCAGCAGTATCA+CGG 0.589791 1_4:-71091665 None:intergenic
AACGACGTTGAAGAGTTCCC+GGG 0.591223 1_4:-71090150 None:intergenic
GTGCTGTGTGCTCTTCCTCG+AGG 0.591682 1_4:+71090370 Msa0182520:CDS
ACCTTATGTCAAACAAGTGA+AGG 0.591802 1_4:+71091156 Msa0182520:CDS
TTCAAGGTCAATAGGAGACA+TGG 0.592569 1_4:+71091108 Msa0182520:CDS
ACTTGATCTTGCTCCAAGCG+AGG 0.593031 1_4:+71093182 Msa0182520:CDS
TTTAGCTGAAACAGAATGTG+AGG 0.596166 1_4:+71089113 Msa0182520:five_prime_UTR
GATCAGCAATGCTTGCTGAA+AGG 0.596385 1_4:+71091736 Msa0182520:CDS
GTGGTTGCAAGCTTTACCTA+GGG 0.600761 1_4:+71090408 Msa0182520:CDS
ATGCCGCCTCCCTTCACCGG+AGG 0.602036 1_4:-71089977 None:intergenic
ATTCTGTTTCAGCTAAAAGT+CGG 0.605833 1_4:-71089107 None:intergenic
TCGCGATAAGAAGGATGCAA+TGG 0.608406 1_4:+71093281 Msa0182520:CDS
CAGATCTTTGATGGACACAA+TGG 0.608852 1_4:+71090304 Msa0182520:intron
TAGCATTGTCGGAGGTGCTG+AGG 0.609567 1_4:+71090903 Msa0182520:CDS
CAGGAAGCCCTAAGAACAAG+AGG 0.610025 1_4:+71091519 Msa0182520:intron
TCGTCTCGCCCAAGCCCTCG+AGG 0.610958 1_4:-71090385 None:intergenic
ACTGTGACAGTTGCATCAGT+TGG 0.612361 1_4:+71090666 Msa0182520:CDS
ACAAGTTCGAAGCCATGGCA+AGG 0.618267 1_4:+71093237 Msa0182520:CDS
CATTTGTGATAGTTGATCGG+TGG 0.623061 1_4:+71090643 Msa0182520:CDS
TTTAGCTATCAAAAGCTGGT+GGG 0.624289 1_4:+71091287 Msa0182520:intron
AGCTGCTCAATCTAAGAAAG+GGG 0.626609 1_4:+71090089 Msa0182520:CDS
TCTATGATCAACTGTTAAGG+TGG 0.627145 1_4:-71090730 None:intergenic
CTGGCAGCAAAATCTTGCCG+TGG 0.632235 1_4:+71091358 Msa0182520:CDS
CCGATCAACTATCACAAATG+TGG 0.640192 1_4:-71090640 None:intergenic
AAAAGCAAATGGTGATGGGG+TGG 0.641124 1_4:-71089225 None:intergenic
TGCTCAATCTAAGAAAGGGG+AGG 0.643437 1_4:+71090092 Msa0182520:CDS
CAAGTTCGGCAGGCAAACCA+CGG 0.645152 1_4:-71091375 None:intergenic
AAGTAGCAAAGACTGTGACC+TGG 0.646138 1_4:+71093436 Msa0182520:three_prime_UTR
CGCTTGGAGCAAGATCAAGT+TGG 0.652054 1_4:-71093179 None:intergenic
TCGTTGTATACTAGACACCC+AGG 0.652497 1_4:+71090695 Msa0182520:CDS
CCTCCTGGCCAGCATCGAAG+GGG 0.656740 1_4:-71091076 None:intergenic
GATAAGGAATTTCAGAGCAG+AGG 0.660496 1_4:+71090457 Msa0182520:CDS
CATAGAAAAGGACCTTGCCA+TGG 0.661304 1_4:-71093249 None:intergenic
TTAGCTGAAACAGAATGTGA+GGG 0.661765 1_4:+71089114 Msa0182520:five_prime_UTR
ATATGGCCTCCGGTGAAGGG+AGG 0.664809 1_4:+71089971 Msa0182520:exon
GGTAGGCTTAGCATTGTCGG+AGG 0.666572 1_4:+71090895 Msa0182520:CDS
TATGACACTTTCACTCCACT+AGG 0.675541 1_4:-71093315 None:intergenic
TTTGGTTTGAGATTAAGAGG+AGG 0.679000 1_4:+71089927 Msa0182520:five_prime_UTR
GAGGGCATATCCGTCCACGC+AGG 0.679729 1_4:+71093201 Msa0182520:CDS
TAGCAAAGACTGTGACCTGG+AGG 0.680466 1_4:+71093439 Msa0182520:three_prime_UTR
ATGGAAGGAAAACGACCTAG+TGG 0.681454 1_4:+71093300 Msa0182520:CDS
GAACGTGTTACTGCAAGTGG+AGG 0.682299 1_4:+71090865 Msa0182520:CDS
GCAAATAAGTGCTTACTGTG+TGG 0.684324 1_4:+71089805 Msa0182520:five_prime_UTR
AGGAAGCCCTAAGAACAAGA+GGG 0.692722 1_4:+71091520 Msa0182520:intron
TAGGAAATGATGAAAACTCG+GGG 0.696713 1_4:+71093121 Msa0182520:CDS
CGTTGTATACTAGACACCCA+GGG 0.704314 1_4:+71090696 Msa0182520:CDS
TGGAGAAAATTGAACCTGCG+TGG 0.709652 1_4:-71093215 None:intergenic
TGTATACTAGACACCCAGGG+TGG 0.775500 1_4:+71090699 Msa0182520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAGCATAAAATATTTTT+AGG - chr1_4:71089296-71089315 None:intergenic 10.0%
!!! AAAACTAAAAATTTTAAACA+AGG - chr1_4:71091038-71091057 None:intergenic 10.0%
!! TATATATATATATATAGACA+AGG + chr1_4:71092639-71092658 Msa0182520:intron 10.0%
!!! TCTCTTTTATAAATTTTTAA+AGG - chr1_4:71092883-71092902 None:intergenic 10.0%
!!! TTAATAGTTTTAACTTTTAA+AGG + chr1_4:71092988-71093007 Msa0182520:intron 10.0%
!! TTTATTAGTAGTTAAAAACT+TGG + chr1_4:71089666-71089685 Msa0182520:intron 15.0%
!!! AATTTTGATATTTATCTCTA+AGG + chr1_4:71090780-71090799 Msa0182520:intron 15.0%
!!! TATAAATTATGAAACTGTTT+TGG + chr1_4:71093062-71093081 Msa0182520:intron 15.0%
!! GATTAAAAGTTTATATATAC+AGG - chr1_4:71093646-71093665 None:intergenic 15.0%
!!! CAATGCAAAATTCAATTTTT+TGG - chr1_4:71089693-71089712 None:intergenic 20.0%
!!! AATTGAATTTTGCATTGATA+TGG + chr1_4:71089696-71089715 Msa0182520:intron 20.0%
!! TAAAAAATTAAAGCAATCTC+CGG - chr1_4:71090266-71090285 None:intergenic 20.0%
!!! ATTTTTTTTCGTTCAAGAAA+AGG + chr1_4:71091640-71091659 Msa0182520:CDS 20.0%
!!! AGTTTTTAATTGATGAATAC+CGG + chr1_4:71091787-71091806 Msa0182520:intron 20.0%
!!! TGTTCTTTTAATAACAACAA+GGG + chr1_4:71091922-71091941 Msa0182520:intron 20.0%
!! CTTTAATAATAATGTTCTGT+AGG + chr1_4:71091967-71091986 Msa0182520:intron 20.0%
!!! ACTTTGAAGATTTTACATTT+AGG + chr1_4:71092092-71092111 Msa0182520:intron 20.0%
!! ATTGAGACTTATTCAAATAT+TGG + chr1_4:71092121-71092140 Msa0182520:intron 20.0%
!!! ATTTTGAATATTTTGACTGA+TGG + chr1_4:71092196-71092215 Msa0182520:intron 20.0%
!! TTGTAAAATAAACATGACTA+TGG + chr1_4:71092376-71092395 Msa0182520:intron 20.0%
!!! GCTTGTAATATTTTGTTAAA+CGG + chr1_4:71092809-71092828 Msa0182520:intron 20.0%
!! TTAAAACTATTAATGTGACT+TGG - chr1_4:71092981-71093000 None:intergenic 20.0%
!!! AAACTTTTAATCTGTAGTTA+TGG + chr1_4:71093654-71093673 Msa0182520:three_prime_UTR 20.0%
! TTGAGAACATAAAAGAAACA+AGG - chr1_4:71089549-71089568 None:intergenic 25.0%
! AGTTGAAAACTTGAAATTCA+TGG + chr1_4:71089635-71089654 Msa0182520:intron 25.0%
! CAAAAGTAAAACACTCAAAA+GGG - chr1_4:71089859-71089878 None:intergenic 25.0%
!!! GTTTTGAAATTGGACTAATT+TGG + chr1_4:71089909-71089928 Msa0182520:five_prime_UTR 25.0%
!!! TAATTTGGTTTGAGATTAAG+AGG + chr1_4:71089924-71089943 Msa0182520:five_prime_UTR 25.0%
! ATTATGTCATGTAGTTCAAA+AGG - chr1_4:71090228-71090247 None:intergenic 25.0%
!!! AATTTTTTACTCACTTCTTC+TGG + chr1_4:71090277-71090296 Msa0182520:intron 25.0%
! ATAGAAAGCTATTCTTATTG+AGG + chr1_4:71090513-71090532 Msa0182520:intron 25.0%
!!! ATACTTTTTCCATCCTAAAA+TGG + chr1_4:71090947-71090966 Msa0182520:intron 25.0%
!! ATCTTCCTAATTTCCATTTT+AGG - chr1_4:71090963-71090982 None:intergenic 25.0%
!!! TTTTCTAGCATCTTATCAAA+CGG + chr1_4:71090996-71091015 Msa0182520:intron 25.0%
!!! AGTTTTGAATAATTGCAGAT+TGG + chr1_4:71091052-71091071 Msa0182520:intron 25.0%
! AAAAAACTTACACTTTGTCA+TGG + chr1_4:71091262-71091281 Msa0182520:intron 25.0%
!! CTGTTCTTTTAATAACAACA+AGG + chr1_4:71091921-71091940 Msa0182520:intron 25.0%
!! GTTCTTTTAATAACAACAAG+GGG + chr1_4:71091923-71091942 Msa0182520:intron 25.0%
! AATATTGCTAACTGGTTAAA+TGG + chr1_4:71092066-71092085 Msa0182520:intron 25.0%
! CTCATTTCTGATTTATTATG+AGG - chr1_4:71092492-71092511 None:intergenic 25.0%
!!! TTTATGTTGTGTTTTTGTTG+GGG - chr1_4:71092537-71092556 None:intergenic 25.0%
!!! CTTTATGTTGTGTTTTTGTT+GGG - chr1_4:71092538-71092557 None:intergenic 25.0%
! GACAATGTATCATTATGTTA+AGG - chr1_4:71092564-71092583 None:intergenic 25.0%
! TTAAAGGATGCAAGATTATA+CGG + chr1_4:71093004-71093023 Msa0182520:intron 25.0%
!! TATACGGTGTCAAATTTATT+AGG + chr1_4:71093020-71093039 Msa0182520:intron 25.0%
! ATTAGGAAATGATGAAAACT+CGG + chr1_4:71093119-71093138 Msa0182520:CDS 25.0%
! CGATTACAAAAAATGAAAGA+TGG - chr1_4:71093376-71093395 None:intergenic 25.0%
! TAATCAAGATTATTCCGATT+TGG - chr1_4:71093602-71093621 None:intergenic 25.0%
! ATAATCTTGATTAACTATGC+AGG + chr1_4:71093609-71093628 Msa0182520:three_prime_UTR 25.0%
! TTTATATATACAGGAAGTTG+GGG - chr1_4:71093637-71093656 None:intergenic 25.0%
! GTTTATATATACAGGAAGTT+GGG - chr1_4:71093638-71093657 None:intergenic 25.0%
! AGTTTATATATACAGGAAGT+TGG - chr1_4:71093639-71093658 None:intergenic 25.0%
ATTCTGTTTCAGCTAAAAGT+CGG - chr1_4:71089110-71089129 None:intergenic 30.0%
AAGAATGGCAAAAAAGCAAA+TGG - chr1_4:71089239-71089258 None:intergenic 30.0%
!!! TGCTTTTTTGCCATTCTTTT+TGG + chr1_4:71089241-71089260 Msa0182520:five_prime_UTR 30.0%
AAGAAGCAATAAAACATGCA+TGG - chr1_4:71089461-71089480 None:intergenic 30.0%
AGCTTTACCAAAATAGAAAG+AGG - chr1_4:71089607-71089626 None:intergenic 30.0%
!! TTTTGCATTGATATGGTAAG+TGG + chr1_4:71089703-71089722 Msa0182520:intron 30.0%
! TTTGCATTGATATGGTAAGT+GGG + chr1_4:71089704-71089723 Msa0182520:intron 30.0%
CCAAAAGTAAAACACTCAAA+AGG - chr1_4:71089860-71089879 None:intergenic 30.0%
!! CCTTTTGAGTGTTTTACTTT+TGG + chr1_4:71089857-71089876 Msa0182520:five_prime_UTR 30.0%
!!! GAAAGAGTGTGTTTTGAAAT+TGG + chr1_4:71089899-71089918 Msa0182520:five_prime_UTR 30.0%
!! TGGATTTGTTAAGACTGATA+AGG + chr1_4:71090441-71090460 Msa0182520:CDS 30.0%
AAAGCTATTCTTATTGAGGA+TGG + chr1_4:71090517-71090536 Msa0182520:intron 30.0%
ACATATCAATTCCTATTCCT+CGG - chr1_4:71090552-71090571 None:intergenic 30.0%
! AACCTAATCTGATTTTGTCT+AGG + chr1_4:71090597-71090616 Msa0182520:intron 30.0%
TAGTCTATGATCAACTGTTA+AGG - chr1_4:71090736-71090755 None:intergenic 30.0%
ACAGAAAAAGTTAACTAACG+CGG - chr1_4:71090806-71090825 None:intergenic 30.0%
!! AACTTTTTCTGTATTGCTCA+TGG + chr1_4:71090814-71090833 Msa0182520:intron 30.0%
! ATGAGTTGAACTGTATATAC+AGG + chr1_4:71090839-71090858 Msa0182520:intron 30.0%
TCCATCCTAAAATGGAAATT+AGG + chr1_4:71090955-71090974 Msa0182520:intron 30.0%
!! TCCTAATTTCCATTTTAGGA+TGG - chr1_4:71090959-71090978 None:intergenic 30.0%
ACTTGTTTGACATAAGGTAT+TGG - chr1_4:71091154-71091173 None:intergenic 30.0%
TATAATCAACGACGGAAATA+AGG - chr1_4:71091207-71091226 None:intergenic 30.0%
! TATTTCCGTCGTTGATTATA+AGG + chr1_4:71091207-71091226 Msa0182520:intron 30.0%
AGACTTATAATTGCTTCTGA+TGG + chr1_4:71091310-71091329 Msa0182520:CDS 30.0%
TAATTGCTTCTGATGGAATA+TGG + chr1_4:71091317-71091336 Msa0182520:CDS 30.0%
AATTGCTTCTGATGGAATAT+GGG + chr1_4:71091318-71091337 Msa0182520:CDS 30.0%
! GGAATATTCAGAAGATTTTC+CGG - chr1_4:71091809-71091828 None:intergenic 30.0%
TAGAAGGAAAACAATATGCA+GGG - chr1_4:71091830-71091849 None:intergenic 30.0%
ATAGAAGGAAAACAATATGC+AGG - chr1_4:71091831-71091850 None:intergenic 30.0%
! TGCATATTGTTTTCCTTCTA+TGG + chr1_4:71091830-71091849 Msa0182520:intron 30.0%
AGGATTTCTGTCATTACAAA+TGG + chr1_4:71091871-71091890 Msa0182520:intron 30.0%
ATTTCTGTCATTACAAATGG+AGG + chr1_4:71091874-71091893 Msa0182520:intron 30.0%
ACAAATGGAGGTTAATTCAT+AGG + chr1_4:71091886-71091905 Msa0182520:intron 30.0%
! TTATACTATAGTGATGACGA+CGG + chr1_4:71092014-71092033 Msa0182520:intron 30.0%
TAATCATATAGGGTAGAATC+TGG + chr1_4:71092037-71092056 Msa0182520:intron 30.0%
AATCATATAGGGTAGAATCT+GGG + chr1_4:71092038-71092057 Msa0182520:intron 30.0%
! ATTCAAATATTGGTTGAGAG+AGG + chr1_4:71092131-71092150 Msa0182520:intron 30.0%
TCGCTTAATCTGATTTAGAA+GGG - chr1_4:71092173-71092192 None:intergenic 30.0%
TTCGCTTAATCTGATTTAGA+AGG - chr1_4:71092174-71092193 None:intergenic 30.0%
! TGATTAGTTGAAACTAGAGA+AGG + chr1_4:71092238-71092257 Msa0182520:intron 30.0%
! GATTAGTTGAAACTAGAGAA+GGG + chr1_4:71092239-71092258 Msa0182520:intron 30.0%
AGAGGATACTGTTAAGTATT+TGG - chr1_4:71092281-71092300 None:intergenic 30.0%
GCTTTAGTCAAATATTAGCT+TGG - chr1_4:71092313-71092332 None:intergenic 30.0%
!! CCTTTATGTTGTGTTTTTGT+TGG - chr1_4:71092539-71092558 None:intergenic 30.0%
CCAACAAAAACACAACATAA+AGG + chr1_4:71092536-71092555 Msa0182520:intron 30.0%
! TTGTTTCTCAATTCCTACTT+AGG + chr1_4:71092716-71092735 Msa0182520:intron 30.0%
TACAAGCTTATAATGCTTCT+AGG - chr1_4:71092796-71092815 None:intergenic 30.0%
AAGTGAAATCATATCTACAC+CGG - chr1_4:71092934-71092953 None:intergenic 30.0%
TTAGGAAATGATGAAAACTC+GGG + chr1_4:71093120-71093139 Msa0182520:CDS 30.0%
TTTAGCTGAAACAGAATGTG+AGG + chr1_4:71089113-71089132 Msa0182520:five_prime_UTR 35.0%
TTAGCTGAAACAGAATGTGA+GGG + chr1_4:71089114-71089133 Msa0182520:five_prime_UTR 35.0%
!!! TTTTTTCCATCCTTGAAAGC+TGG + chr1_4:71089187-71089206 Msa0182520:five_prime_UTR 35.0%
! CAAAAAAGCAAATGGTGATG+GGG - chr1_4:71089231-71089250 None:intergenic 35.0%
GCAAAAAAGCAAATGGTGAT+GGG - chr1_4:71089232-71089251 None:intergenic 35.0%
TACATGTAGATTCTGTTCCA+AGG - chr1_4:71089268-71089287 None:intergenic 35.0%
AAGCAAGTTGTAGATCTGAA+TGG - chr1_4:71089487-71089506 None:intergenic 35.0%
GAATTACCAGTGAGAATGTT+TGG - chr1_4:71089520-71089539 None:intergenic 35.0%
! GTCTCTTCCTCTTTCTATTT+TGG + chr1_4:71089597-71089616 Msa0182520:intron 35.0%
!! TTTGGTTTGAGATTAAGAGG+AGG + chr1_4:71089927-71089946 Msa0182520:five_prime_UTR 35.0%
TTAAGAGGAGGACTACTATT+TGG + chr1_4:71089939-71089958 Msa0182520:five_prime_UTR 35.0%
! CTATTTGGTGGAGTAAGATA+TGG + chr1_4:71089954-71089973 Msa0182520:exon 35.0%
AGAGATGAAAAGTGAGAAGA+TGG + chr1_4:71090041-71090060 Msa0182520:CDS 35.0%
AAGCTGCTCAATCTAAGAAA+GGG + chr1_4:71090088-71090107 Msa0182520:CDS 35.0%
CTCCTAGACAAAATCAGATT+AGG - chr1_4:71090602-71090621 None:intergenic 35.0%
! TTTTGTCTAGGAGAAACTTC+TGG + chr1_4:71090609-71090628 Msa0182520:intron 35.0%
CCACATTTGTGATAGTTGAT+CGG + chr1_4:71090640-71090659 Msa0182520:CDS 35.0%
TCTATGATCAACTGTTAAGG+TGG - chr1_4:71090733-71090752 None:intergenic 35.0%
AGTTGAACTGTATATACAGG+AGG + chr1_4:71090842-71090861 Msa0182520:intron 35.0%
GTTGAACTGTATATACAGGA+GGG + chr1_4:71090843-71090862 Msa0182520:intron 35.0%
TTAGGAAGATAGCTTACAAC+TGG + chr1_4:71090973-71090992 Msa0182520:intron 35.0%
ACCTTATGTCAAACAAGTGA+AGG + chr1_4:71091156-71091175 Msa0182520:CDS 35.0%
ACCTTCACTTGTTTGACATA+AGG - chr1_4:71091160-71091179 None:intergenic 35.0%
! ATAGGCCTTATAATCAACGA+CGG - chr1_4:71091215-71091234 None:intergenic 35.0%
!!! GGATTTTAGCTATCAAAAGC+TGG + chr1_4:71091283-71091302 Msa0182520:intron 35.0%
!! TTTTAGCTATCAAAAGCTGG+TGG + chr1_4:71091286-71091305 Msa0182520:intron 35.0%
TTTAGCTATCAAAAGCTGGT+GGG + chr1_4:71091287-71091306 Msa0182520:intron 35.0%
GTCAACTTCGCAATATGATT+TGG - chr1_4:71091468-71091487 None:intergenic 35.0%
ACGTATTCCTACTGTTATTC+AGG + chr1_4:71091500-71091519 Msa0182520:intron 35.0%
CTTTAACCCTCTTGTTCTTA+GGG - chr1_4:71091529-71091548 None:intergenic 35.0%
!!! TCAGCTTATTCCGCTTTTTT+GGG - chr1_4:71091617-71091636 None:intergenic 35.0%
!!! TTCAGCTTATTCCGCTTTTT+TGG - chr1_4:71091618-71091637 None:intergenic 35.0%
GCTTTCGGCTATAAATATTG+TGG + chr1_4:71091695-71091714 Msa0182520:CDS 35.0%
GTGGAAGAATTGTTTGAAGA+AGG + chr1_4:71091714-71091733 Msa0182520:CDS 35.0%
GTAATGACAGAAATCCTGTT+GGG - chr1_4:71091868-71091887 None:intergenic 35.0%
TGTAATGACAGAAATCCTGT+TGG - chr1_4:71091869-71091888 None:intergenic 35.0%
ATGGAGGTTAATTCATAGGT+TGG + chr1_4:71091890-71091909 Msa0182520:intron 35.0%
ATGACGACGGTAATCATATA+GGG + chr1_4:71092027-71092046 Msa0182520:intron 35.0%
CGCTTAATCTGATTTAGAAG+GGG - chr1_4:71092172-71092191 None:intergenic 35.0%
TTGACTGATGGTCAAAATGA+AGG + chr1_4:71092208-71092227 Msa0182520:intron 35.0%
! TTAGCTTGGAATCTTATCAG+AGG - chr1_4:71092299-71092318 None:intergenic 35.0%
CAAATAGATGTCAGATGAAC+TGG - chr1_4:71092444-71092463 None:intergenic 35.0%
TTTCACGTATCAAACAGACA+AGG + chr1_4:71092662-71092681 Msa0182520:intron 35.0%
GCTTGCATAAAATCCTAAGT+AGG - chr1_4:71092732-71092751 None:intergenic 35.0%
! TGTTGATTGAGACATACTCA+AGG + chr1_4:71092838-71092857 Msa0182520:intron 35.0%
! TTGACAACATTGTTGTTGTC+CGG + chr1_4:71092912-71092931 Msa0182520:intron 35.0%
TTCATCATTTCCTAATCTGC+AGG - chr1_4:71093115-71093134 None:intergenic 35.0%
TAGGAAATGATGAAAACTCG+GGG + chr1_4:71093121-71093140 Msa0182520:CDS 35.0%
CGACAATCACAACATAGAAA+AGG - chr1_4:71093264-71093283 None:intergenic 35.0%
TACCTGATTGTTAGAGTTTG+AGG + chr1_4:71093510-71093529 Msa0182520:three_prime_UTR 35.0%
ACCTGATTGTTAGAGTTTGA+GGG + chr1_4:71093511-71093530 Msa0182520:three_prime_UTR 35.0%
!! TCAAGATTATTCCGATTTGG+TGG - chr1_4:71093599-71093618 None:intergenic 35.0%
! TGAGGGTGTATTAGTAAGCA+AGG + chr1_4:71089131-71089150 Msa0182520:five_prime_UTR 40.0%
TATGATCAAGCCAGCTTTCA+AGG - chr1_4:71089200-71089219 None:intergenic 40.0%
GGCAAAAAAGCAAATGGTGA+TGG - chr1_4:71089233-71089252 None:intergenic 40.0%
!! TTGCCATTCTTTTTGGTCCT+TGG + chr1_4:71089248-71089267 Msa0182520:five_prime_UTR 40.0%
GTTCCAAGGACCAAAAAGAA+TGG - chr1_4:71089254-71089273 None:intergenic 40.0%
TCTAGTCATCAATACGCGTT+TGG + chr1_4:71089393-71089412 Msa0182520:intron 40.0%
CACATTCCAAACATTCTCAC+TGG + chr1_4:71089511-71089530 Msa0182520:five_prime_UTR 40.0%
GCAAATAAGTGCTTACTGTG+TGG + chr1_4:71089805-71089824 Msa0182520:five_prime_UTR 40.0%
GAGAAGCCTACTGTAAGAAT+TGG + chr1_4:71090063-71090082 Msa0182520:CDS 40.0%
GCTTGACCAATTCTTACAGT+AGG - chr1_4:71090072-71090091 None:intergenic 40.0%
CAAGCTGCTCAATCTAAGAA+AGG + chr1_4:71090087-71090106 Msa0182520:CDS 40.0%
AGCTGCTCAATCTAAGAAAG+GGG + chr1_4:71090089-71090108 Msa0182520:CDS 40.0%
!! AACGTCGTTTTCTGTATTCG+CGG + chr1_4:71090164-71090183 Msa0182520:CDS 40.0%
! TAATAGCTTTGCTAGCTGTC+CGG + chr1_4:71090244-71090263 Msa0182520:intron 40.0%
! TCTGGTTCACAGATCTTTGA+TGG + chr1_4:71090295-71090314 Msa0182520:intron 40.0%
! CAGATCTTTGATGGACACAA+TGG + chr1_4:71090304-71090323 Msa0182520:intron 40.0%
! TGCTGCTGCTGTTTATACTA+AGG + chr1_4:71090330-71090349 Msa0182520:CDS 40.0%
GATAAGGAATTTCAGAGCAG+AGG + chr1_4:71090457-71090476 Msa0182520:CDS 40.0%
AACTATCACAAATGTGGCTG+TGG - chr1_4:71090637-71090656 None:intergenic 40.0%
CCGATCAACTATCACAAATG+TGG - chr1_4:71090643-71090662 None:intergenic 40.0%
CATTTGTGATAGTTGATCGG+TGG + chr1_4:71090643-71090662 Msa0182520:CDS 40.0%
CTATGCCTTTCAAGGTCAAT+AGG + chr1_4:71091100-71091119 Msa0182520:CDS 40.0%
TGTCTCCTATTGACCTTGAA+AGG - chr1_4:71091108-71091127 None:intergenic 40.0%
TTCAAGGTCAATAGGAGACA+TGG + chr1_4:71091108-71091127 Msa0182520:CDS 40.0%
TCAATAGGAGACATGGATGT+TGG + chr1_4:71091115-71091134 Msa0182520:CDS 40.0%
TCAACGACGGAAATAAGGAA+AGG - chr1_4:71091202-71091221 None:intergenic 40.0%
AAAGACCTTGTAGGATGCAT+AGG - chr1_4:71091233-71091252 None:intergenic 40.0%
ATCCTACAAGGTCTTTGTTC+AGG + chr1_4:71091237-71091256 Msa0182520:intron 40.0%
ATCCTGAACAAAGACCTTGT+AGG - chr1_4:71091242-71091261 None:intergenic 40.0%
!! TATGCTATGCTTGCTGTAGT+TGG + chr1_4:71091432-71091451 Msa0182520:intron 40.0%
CCTTTAACCCTCTTGTTCTT+AGG - chr1_4:71091530-71091549 None:intergenic 40.0%
CCTAAGAACAAGAGGGTTAA+AGG + chr1_4:71091527-71091546 Msa0182520:CDS 40.0%
!!! AGCTTATTCCGCTTTTTTGG+GGG - chr1_4:71091615-71091634 None:intergenic 40.0%
!!! CAGCTTATTCCGCTTTTTTG+GGG - chr1_4:71091616-71091635 None:intergenic 40.0%
TAAGCTGTCGAAGAAGCTTT+CGG + chr1_4:71091680-71091699 Msa0182520:CDS 40.0%
GACAAAAGGATCACCATAGA+AGG - chr1_4:71091846-71091865 None:intergenic 40.0%
AGAAATCCTGTTGGGACAAA+AGG - chr1_4:71091860-71091879 None:intergenic 40.0%
GATGACGACGGTAATCATAT+AGG + chr1_4:71092026-71092045 Msa0182520:intron 40.0%
! GACAAGGTTTTCGTATAGAC+TGG + chr1_4:71092678-71092697 Msa0182520:intron 40.0%
CCTAATCTGCAGGATACAAT+TGG - chr1_4:71093105-71093124 None:intergenic 40.0%
CCAATTGTATCCTGCAGATT+AGG + chr1_4:71093102-71093121 Msa0182520:intron 40.0%
TTGTGATTGTCGCGATAAGA+AGG + chr1_4:71093272-71093291 Msa0182520:CDS 40.0%
GATAAGAAGGATGCAATGGA+AGG + chr1_4:71093285-71093304 Msa0182520:CDS 40.0%
TATGACACTTTCACTCCACT+AGG - chr1_4:71093318-71093337 None:intergenic 40.0%
!! TGGAGTGAAAGTGTCATAGT+AGG + chr1_4:71093320-71093339 Msa0182520:exon 40.0%
ACCCTCAAACTCTAACAATC+AGG - chr1_4:71093515-71093534 None:intergenic 40.0%
TGCTTAATGTGCCACCAAAT+CGG + chr1_4:71093585-71093604 Msa0182520:three_prime_UTR 40.0%
TCTCTGTTTCCTTTGCCTAG+AGG - chr1_4:71089068-71089087 None:intergenic 45.0%
ATCAAGCCAGCTTTCAAGGA+TGG - chr1_4:71089196-71089215 None:intergenic 45.0%
!! AAAAGCAAATGGTGATGGGG+TGG - chr1_4:71089228-71089247 None:intergenic 45.0%
AGAGGAGGACTACTATTTGG+TGG + chr1_4:71089942-71089961 Msa0182520:five_prime_UTR 45.0%
CTCTTAAGCAATGCAGCAAG+AGG - chr1_4:71090021-71090040 None:intergenic 45.0%
TGCTCAATCTAAGAAAGGGG+AGG + chr1_4:71090092-71090111 Msa0182520:CDS 45.0%
AAACGACGTTGAAGAGTTCC+CGG - chr1_4:71090154-71090173 None:intergenic 45.0%
AGTGGTTGCAAGCTTTACCT+AGG + chr1_4:71090407-71090426 Msa0182520:CDS 45.0%
GTGGTTGCAAGCTTTACCTA+GGG + chr1_4:71090408-71090427 Msa0182520:CDS 45.0%
! AATTTCAGAGCAGAGGTGTG+TGG + chr1_4:71090464-71090483 Msa0182520:intron 45.0%
GGAATACAGAACCGAGGAAT+AGG + chr1_4:71090538-71090557 Msa0182520:intron 45.0%
ACTGTGACAGTTGCATCAGT+TGG + chr1_4:71090666-71090685 Msa0182520:CDS 45.0%
TCGTTGTATACTAGACACCC+AGG + chr1_4:71090695-71090714 Msa0182520:CDS 45.0%
CGTTGTATACTAGACACCCA+GGG + chr1_4:71090696-71090715 Msa0182520:CDS 45.0%
! GTTGGTAGGCTTAGCATTGT+CGG + chr1_4:71090892-71090911 Msa0182520:CDS 45.0%
TAAGGCCTATGCATCCTACA+AGG + chr1_4:71091225-71091244 Msa0182520:intron 45.0%
GGATGCTGTATCATCAGAAC+TGG + chr1_4:71091339-71091358 Msa0182520:CDS 45.0%
AACCTGCATAGCAGCAAGTT+CGG - chr1_4:71091392-71091411 None:intergenic 45.0%
TGCTGCTATGCAGGTTGTAA+AGG + chr1_4:71091396-71091415 Msa0182520:CDS 45.0%
CTACAGCAAGCATAGCATAG+TGG - chr1_4:71091431-71091450 None:intergenic 45.0%
AGGGCTTCCTGAATAACAGT+AGG - chr1_4:71091510-71091529 None:intergenic 45.0%
AGGAAGCCCTAAGAACAAGA+GGG + chr1_4:71091520-71091539 Msa0182520:intron 45.0%
GTGGCAATTCGTTATCAGGT+GGG - chr1_4:71091584-71091603 None:intergenic 45.0%
!! GTTGGTGGCAATTCGTTATC+AGG - chr1_4:71091588-71091607 None:intergenic 45.0%
!!! TTATTCCGCTTTTTTGGGGG+AGG - chr1_4:71091612-71091631 None:intergenic 45.0%
ACAGCTTACCAGCAGTATCA+CGG - chr1_4:71091668-71091687 None:intergenic 45.0%
! GATCAGCAATGCTTGCTGAA+AGG + chr1_4:71091736-71091755 Msa0182520:CDS 45.0%
AACAACAAGGGGATGAAGCT+AGG + chr1_4:71091934-71091953 Msa0182520:intron 45.0%
ACAACAAGGGGATGAAGCTA+GGG + chr1_4:71091935-71091954 Msa0182520:intron 45.0%
GGGCTTCGAATATTGCTAAC+TGG + chr1_4:71092058-71092077 Msa0182520:intron 45.0%
ATGACTATGGCATTGTGCAC+TGG + chr1_4:71092389-71092408 Msa0182520:intron 45.0%
CAGATGAACTGGAGTTACAG+CGG - chr1_4:71092433-71092452 None:intergenic 45.0%
GAAAATTGAACCTGCGTGGA+CGG - chr1_4:71093214-71093233 None:intergenic 45.0%
TGGAGAAAATTGAACCTGCG+TGG - chr1_4:71093218-71093237 None:intergenic 45.0%
CATAGAAAAGGACCTTGCCA+TGG - chr1_4:71093252-71093271 None:intergenic 45.0%
TCGCGATAAGAAGGATGCAA+TGG + chr1_4:71093281-71093300 Msa0182520:CDS 45.0%
ATGGAAGGAAAACGACCTAG+TGG + chr1_4:71093300-71093319 Msa0182520:CDS 45.0%
AAGTAGCAAAGACTGTGACC+TGG + chr1_4:71093436-71093455 Msa0182520:three_prime_UTR 45.0%
TGAGGGTTAAGATCAGTGTG+AGG + chr1_4:71093528-71093547 Msa0182520:three_prime_UTR 45.0%
GTGGAGTAAGATATGGCCTC+CGG + chr1_4:71089961-71089980 Msa0182520:exon 50.0%
TAAGATATGGCCTCCGGTGA+AGG + chr1_4:71089967-71089986 Msa0182520:exon 50.0%
AAGATATGGCCTCCGGTGAA+GGG + chr1_4:71089968-71089987 Msa0182520:exon 50.0%
ACTGATTGTCAGCGTGTTCC+CGG + chr1_4:71090132-71090151 Msa0182520:CDS 50.0%
AACGACGTTGAAGAGTTCCC+GGG - chr1_4:71090153-71090172 None:intergenic 50.0%
GAGGATGGAATACAGAACCG+AGG + chr1_4:71090532-71090551 Msa0182520:intron 50.0%
TGTATACTAGACACCCAGGG+TGG + chr1_4:71090699-71090718 Msa0182520:CDS 50.0%
! AGGGAACGTGTTACTGCAAG+TGG + chr1_4:71090862-71090881 Msa0182520:CDS 50.0%
! GAACGTGTTACTGCAAGTGG+AGG + chr1_4:71090865-71090884 Msa0182520:CDS 50.0%
ACTGCAAGTGGAGGTGAAGT+TGG + chr1_4:71090874-71090893 Msa0182520:CDS 50.0%
! CAAGTGGAGGTGAAGTTGGT+AGG + chr1_4:71090878-71090897 Msa0182520:CDS 50.0%
! CTTGAAAGGCATAGACCTCC+TGG - chr1_4:71091094-71091113 None:intergenic 50.0%
CAGGAGGTCTATGCCTTTCA+AGG + chr1_4:71091092-71091111 Msa0182520:CDS 50.0%
CAGGAAGCCCTAAGAACAAG+AGG + chr1_4:71091519-71091538 Msa0182520:intron 50.0%
GGTGGCAATTCGTTATCAGG+TGG - chr1_4:71091585-71091604 None:intergenic 50.0%
!!! TTTTTTGGGGGAGGTGTTGG+TGG - chr1_4:71091603-71091622 None:intergenic 50.0%
CAACACCTCCCCCAAAAAAG+CGG + chr1_4:71091604-71091623 Msa0182520:CDS 50.0%
AAAAGGTCCCGTGATACTGC+TGG + chr1_4:71091657-71091676 Msa0182520:CDS 50.0%
CAGCTTACCAGCAGTATCAC+GGG - chr1_4:71091667-71091686 None:intergenic 50.0%
! GGTGATCCTTTTGTCCCAAC+AGG + chr1_4:71091851-71091870 Msa0182520:intron 50.0%
CAACAAGGGGATGAAGCTAG+GGG + chr1_4:71091936-71091955 Msa0182520:intron 50.0%
TGGGGTACAGACTGCTGAAA+TGG - chr1_4:71092519-71092538 None:intergenic 50.0%
AACTCGGGGCAATCAACATC+TGG + chr1_4:71093135-71093154 Msa0182520:CDS 50.0%
CGCTTGGAGCAAGATCAAGT+TGG - chr1_4:71093182-71093201 None:intergenic 50.0%
ACTTGATCTTGCTCCAAGCG+AGG + chr1_4:71093182-71093201 Msa0182520:CDS 50.0%
CTTGATCTTGCTCCAAGCGA+GGG + chr1_4:71093183-71093202 Msa0182520:CDS 50.0%
TCTCCACAAGTTCGAAGCCA+TGG + chr1_4:71093232-71093251 Msa0182520:CDS 50.0%
TTGCCATGGCTTCGAACTTG+TGG - chr1_4:71093238-71093257 None:intergenic 50.0%
ACAAGTTCGAAGCCATGGCA+AGG + chr1_4:71093237-71093256 Msa0182520:CDS 50.0%
TAGCAAAGACTGTGACCTGG+AGG + chr1_4:71093439-71093458 Msa0182520:three_prime_UTR 50.0%
! AGAGGCCTGCACTGAGTTTT+TGG + chr1_4:71093465-71093484 Msa0182520:three_prime_UTR 50.0%
! GAGGCCTGCACTGAGTTTTT+GGG + chr1_4:71093466-71093485 Msa0182520:three_prime_UTR 50.0%
TACGCCCAAAAACTCAGTGC+AGG - chr1_4:71093473-71093492 None:intergenic 50.0%
CTGATTGTCAGCGTGTTCCC+GGG + chr1_4:71090133-71090152 Msa0182520:CDS 55.0%
TGCTGTGTGCTCTTCCTCGA+GGG + chr1_4:71090371-71090390 Msa0182520:CDS 55.0%
GCAAGCTTTACCTAGGGCGT+TGG + chr1_4:71090414-71090433 Msa0182520:CDS 55.0%
!! TTACCTAGGGCGTTGGTTGC+TGG + chr1_4:71090421-71090440 Msa0182520:CDS 55.0%
AATCCAGCAACCAACGCCCT+AGG - chr1_4:71090427-71090446 None:intergenic 55.0%
GGTAGGCTTAGCATTGTCGG+AGG + chr1_4:71090895-71090914 Msa0182520:CDS 55.0%
!! TAGCATTGTCGGAGGTGCTG+AGG + chr1_4:71090903-71090922 Msa0182520:CDS 55.0%
! AGATTGGTCCCCTTCGATGC+TGG + chr1_4:71091068-71091087 Msa0182520:intron 55.0%
CTGGCAGCAAAATCTTGCCG+TGG + chr1_4:71091358-71091377 Msa0182520:CDS 55.0%
CAAGTTCGGCAGGCAAACCA+CGG - chr1_4:71091378-71091397 None:intergenic 55.0%
TGCATAGCAGCAAGTTCGGC+AGG - chr1_4:71091388-71091407 None:intergenic 55.0%
!! TGCCGAACTTGCTGCTATGC+AGG + chr1_4:71091387-71091406 Msa0182520:CDS 55.0%
!!! CGCTTTTTTGGGGGAGGTGT+TGG - chr1_4:71091606-71091625 None:intergenic 55.0%
AAGGGGATGAAGCTAGGGGA+GGG + chr1_4:71091940-71091959 Msa0182520:intron 55.0%
ACTGTGACCTGGAGGAAGAG+AGG + chr1_4:71093447-71093466 Msa0182520:three_prime_UTR 55.0%
ATATGGCCTCCGGTGAAGGG+AGG + chr1_4:71089971-71089990 Msa0182520:exon 60.0%
ATGATGCCGCCTCCCTTCAC+CGG - chr1_4:71089983-71090002 None:intergenic 60.0%
GTGCTGTGTGCTCTTCCTCG+AGG + chr1_4:71090370-71090389 Msa0182520:CDS 60.0%
TGTGCTCTTCCTCGAGGGCT+TGG + chr1_4:71090376-71090395 Msa0182520:CDS 60.0%
GTGCTCTTCCTCGAGGGCTT+GGG + chr1_4:71090377-71090396 Msa0182520:CDS 60.0%
! ACCTCCTGGCCAGCATCGAA+GGG - chr1_4:71091080-71091099 None:intergenic 60.0%
CAAGGGGATGAAGCTAGGGG+AGG + chr1_4:71091939-71091958 Msa0182520:intron 60.0%
TGGACGGATATGCCCTCGCT+TGG - chr1_4:71093198-71093217 None:intergenic 60.0%
GGTGGTCACAGCACCACCCT+GGG - chr1_4:71090715-71090734 None:intergenic 65.0%
AGGTGGTCACAGCACCACCC+TGG - chr1_4:71090716-71090735 None:intergenic 65.0%
! CCTCCTGGCCAGCATCGAAG+GGG - chr1_4:71091079-71091098 None:intergenic 65.0%
! GACCTCCTGGCCAGCATCGA+AGG - chr1_4:71091081-71091100 None:intergenic 65.0%
! GAGGGCATATCCGTCCACGC+AGG + chr1_4:71093201-71093220 Msa0182520:CDS 65.0%
GTGCAGGCCTCTCTTCCTCC+AGG - chr1_4:71093457-71093476 None:intergenic 65.0%
TGGCCTCCGGTGAAGGGAGG+CGG + chr1_4:71089974-71089993 Msa0182520:CDS 70.0%
ATGCCGCCTCCCTTCACCGG+AGG - chr1_4:71089980-71089999 None:intergenic 70.0%
TCGTCTCGCCCAAGCCCTCG+AGG - chr1_4:71090388-71090407 None:intergenic 70.0%
GAGGGCTTGGGCGAGACGAG+TGG + chr1_4:71090389-71090408 Msa0182520:CDS 70.0%
GGTCCCCTTCGATGCTGGCC+AGG + chr1_4:71091073-71091092 Msa0182520:CDS 70.0%
CCCCTTCGATGCTGGCCAGG+AGG + chr1_4:71091076-71091095 Msa0182520:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 71089060 71093725 71089060 ID=Msa0182520;Name=Msa0182520
chr1_4 mRNA 71089060 71093725 71089060 ID=Msa0182520-mRNA-1;Parent=Msa0182520;Name=Msa0182520-mRNA-1;_AED=0.13;_eAED=0.13;_QI=466|1|1|1|0.77|0.7|10|387|430
chr1_4 exon 71089060 71089284 71089060 ID=Msa0182520-mRNA-1:exon:23858;Parent=Msa0182520-mRNA-1
chr1_4 exon 71089492 71089532 71089492 ID=Msa0182520-mRNA-1:exon:23859;Parent=Msa0182520-mRNA-1
chr1_4 exon 71089773 71090185 71089773 ID=Msa0182520-mRNA-1:exon:23860;Parent=Msa0182520-mRNA-1
chr1_4 exon 71090307 71090478 71090307 ID=Msa0182520-mRNA-1:exon:23861;Parent=Msa0182520-mRNA-1
chr1_4 exon 71090619 71090772 71090619 ID=Msa0182520-mRNA-1:exon:23862;Parent=Msa0182520-mRNA-1
chr1_4 exon 71090861 71090924 71090861 ID=Msa0182520-mRNA-1:exon:23863;Parent=Msa0182520-mRNA-1
chr1_4 exon 71091070 71091177 71091070 ID=Msa0182520-mRNA-1:exon:23864;Parent=Msa0182520-mRNA-1
chr1_4 exon 71091292 71091417 71091292 ID=Msa0182520-mRNA-1:exon:23865;Parent=Msa0182520-mRNA-1
chr1_4 exon 71091522 71091757 71091522 ID=Msa0182520-mRNA-1:exon:23866;Parent=Msa0182520-mRNA-1
chr1_4 exon 71093119 71093725 71093119 ID=Msa0182520-mRNA-1:exon:23867;Parent=Msa0182520-mRNA-1
chr1_4 five_prime_UTR 71089060 71089284 71089060 ID=Msa0182520-mRNA-1:five_prime_utr;Parent=Msa0182520-mRNA-1
chr1_4 five_prime_UTR 71089492 71089532 71089492 ID=Msa0182520-mRNA-1:five_prime_utr;Parent=Msa0182520-mRNA-1
chr1_4 five_prime_UTR 71089773 71089972 71089773 ID=Msa0182520-mRNA-1:five_prime_utr;Parent=Msa0182520-mRNA-1
chr1_4 CDS 71089973 71090185 71089973 ID=Msa0182520-mRNA-1:cds;Parent=Msa0182520-mRNA-1
chr1_4 CDS 71090307 71090478 71090307 ID=Msa0182520-mRNA-1:cds;Parent=Msa0182520-mRNA-1
chr1_4 CDS 71090619 71090772 71090619 ID=Msa0182520-mRNA-1:cds;Parent=Msa0182520-mRNA-1
chr1_4 CDS 71090861 71090924 71090861 ID=Msa0182520-mRNA-1:cds;Parent=Msa0182520-mRNA-1
chr1_4 CDS 71091070 71091177 71091070 ID=Msa0182520-mRNA-1:cds;Parent=Msa0182520-mRNA-1
chr1_4 CDS 71091292 71091417 71091292 ID=Msa0182520-mRNA-1:cds;Parent=Msa0182520-mRNA-1
chr1_4 CDS 71091522 71091757 71091522 ID=Msa0182520-mRNA-1:cds;Parent=Msa0182520-mRNA-1
chr1_4 CDS 71093119 71093338 71093119 ID=Msa0182520-mRNA-1:cds;Parent=Msa0182520-mRNA-1
chr1_4 three_prime_UTR 71093339 71093725 71093339 ID=Msa0182520-mRNA-1:three_prime_utr;Parent=Msa0182520-mRNA-1
Gene Sequence

>Msa0182520

ATGGCCTCCGGTGAAGGGAGGCGGCATCATCATCATGATCTTGTACCTCTTGCTGCATTGCTTAAGAGAGAGATGAAAAGTGAGAAGATGGAGAAGCCTACTGTAAGAATTGGTCAAGCTGCTCAATCTAAGAAAGGGGAGGATTACTTTTTAATTAAGACTGATTGTCAGCGTGTTCCCGGGAACTCTTCAACGTCGTTTTCTGTATTCGCGATCTTTGATGGACACAATGGAAATGCTGCTGCTGTTTATACTAAGGAAAATTTGCTAAATCATGTGCTGTGTGCTCTTCCTCGAGGGCTTGGGCGAGACGAGTGGTTGCAAGCTTTACCTAGGGCGTTGGTTGCTGGATTTGTTAAGACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCCACATTTGTGATAGTTGATCGGTGGACTGTGACAGTTGCATCAGTTGGAGATTCTCGTTGTATACTAGACACCCAGGGTGGTGCTGTGACCACCTTAACAGTTGATCATAGACTAGAAGAGAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGTGAAGTTGGTAGGCTTAGCATTGTCGGAGGTGCTGAGATTGGTCCCCTTCGATGCTGGCCAGGAGGTCTATGCCTTTCAAGGTCAATAGGAGACATGGATGTTGGAGAGTTTATAGTTCCAATACCTTATGTCAAACAAGTGAAGCTATCAAAAGCTGGTGGGAGACTTATAATTGCTTCTGATGGAATATGGGATGCTGTATCATCAGAACTGGCAGCAAAATCTTGCCGTGGTTTGCCTGCCGAACTTGCTGCTATGCAGGTTGTAAAGGAAGCCCTAAGAACAAGAGGGTTAAAGGATGATACAACATGTATAGTAGTTGACATAATCCCACCTGATAACGAATTGCCACCAACACCTCCCCCAAAAAAGCGGAATAAGCTGAAAGATTTTTTTTCGTTCAAGAAAAGGTCCCGTGATACTGCTGGTAAGCTGTCGAAGAAGCTTTCGGCTATAAATATTGTGGAAGAATTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGAAAACTCGGGGCAATCAACATCTGGTCTTTTTGTATGTGCTGTATGCCAACTTGATCTTGCTCCAAGCGAGGGCATATCCGTCCACGCAGGTTCAATTTTCTCCACAAGTTCGAAGCCATGGCAAGGTCCTTTTCTATGTTGTGATTGTCGCGATAAGAAGGATGCAATGGAAGGAAAACGACCTAGTGGAGTGAAAGTGTCATAG
Protein sequence

>Msa0182520

MASGEGRRHHHHDLVPLAALLKREMKSEKMEKPTVRIGQAAQSKKGEDYFLIKTDCQRVPGNSSTSFSVFAIFDGHNGNAAAVYTKENLLNHVLCALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDAVSSELAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPKKRNKLKDFFSFKKRSRDTAGKLSKKLSAINIVEELFEEGSAMLAERLGNDENSGQSTSGLFVCAVCQLDLAPSEGISVHAGSIFSTSSKPWQGPFLCCDCRDKKDAMEGKRPSGVKVS*