Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366370 | XP_013470341.1 | 98.992 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366370 | sp|Q5PNS9|P2C64_ARATH | 73.724 | 392 | 103 | 0 | 1 | 392 | 1 | 392 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366370 | A0A072VQY6 | 98.992 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 0.0 | 818 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044510 | Msa1366370 | 0.997178 | 3.989556e-238 | -8.615850e-47 |
| Msa0619010 | Msa1366370 | 0.800064 | 1.717469e-48 | -8.615850e-47 |
| Msa0659080 | Msa1366370 | 0.802050 | 6.742973e-49 | -8.615850e-47 |
| Msa0138090 | Msa1366370 | 0.981347 | 2.274100e-152 | -8.615850e-47 |
| Msa0182520 | Msa1366370 | 0.814905 | 1.214060e-51 | -8.615850e-47 |
| Msa0183330 | Msa1366370 | 0.939260 | 1.713041e-99 | -8.615850e-47 |
| Msa0429980 | Msa1366370 | 0.834293 | 3.258715e-56 | -8.615850e-47 |
| Msa0270590 | Msa1366370 | 0.807846 | 4.140570e-50 | -8.615850e-47 |
| Msa0500640 | Msa1366370 | 0.805217 | 1.484759e-49 | -8.615850e-47 |
| Msa0500660 | Msa1366370 | 0.832461 | 9.331047e-56 | -8.615850e-47 |
| Msa0527130 | Msa1366370 | 0.831003 | 2.135005e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366370 | MtrunA17_Chr1g0211251 | 98.992 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 0.0 | 818 |
| Msa1366370 | MtrunA17_Chr7g0250061 | 81.654 | 387 | 71 | 0 | 6 | 392 | 1 | 387 | 0.0 | 644 |
| Msa1366370 | MtrunA17_Chr8g0371321 | 75.258 | 388 | 94 | 1 | 1 | 388 | 1 | 386 | 0.0 | 609 |
| Msa1366370 | MtrunA17_Chr1g0213351 | 68.033 | 366 | 109 | 2 | 12 | 377 | 13 | 370 | 0.0 | 522 |
| Msa1366370 | MtrunA17_Chr7g0263281 | 63.934 | 366 | 128 | 2 | 11 | 376 | 4 | 365 | 1.66e-167 | 473 |
| Msa1366370 | MtrunA17_Chr2g0294291 | 58.621 | 377 | 144 | 4 | 1 | 374 | 1 | 368 | 2.36e-162 | 460 |
| Msa1366370 | MtrunA17_Chr1g0181901 | 56.110 | 401 | 144 | 4 | 8 | 377 | 1 | 400 | 2.61e-154 | 441 |
| Msa1366370 | MtrunA17_Chr1g0175381 | 53.927 | 382 | 157 | 5 | 1 | 375 | 1 | 370 | 1.46e-150 | 431 |
| Msa1366370 | MtrunA17_Chr1g0207571 | 53.743 | 374 | 158 | 3 | 9 | 380 | 2 | 362 | 5.32e-143 | 411 |
| Msa1366370 | MtrunA17_Chr3g0089711 | 45.109 | 368 | 181 | 6 | 1 | 362 | 1 | 353 | 3.50e-103 | 310 |
| Msa1366370 | MtrunA17_Chr3g0089721 | 44.837 | 368 | 182 | 6 | 1 | 362 | 1 | 353 | 1.30e-102 | 308 |
| Msa1366370 | MtrunA17_Chr7g0256751 | 49.221 | 321 | 146 | 6 | 43 | 356 | 38 | 348 | 1.98e-97 | 297 |
| Msa1366370 | MtrunA17_Chr7g0256771 | 47.601 | 271 | 131 | 4 | 39 | 307 | 35 | 296 | 1.06e-80 | 250 |
| Msa1366370 | MtrunA17_Chr3g0089691 | 48.387 | 248 | 121 | 3 | 120 | 362 | 22 | 267 | 2.97e-78 | 243 |
| Msa1366370 | MtrunA17_Chr4g0063111 | 35.843 | 332 | 190 | 7 | 31 | 356 | 33 | 347 | 4.44e-60 | 202 |
| Msa1366370 | MtrunA17_Chr4g0063051 | 34.104 | 346 | 181 | 12 | 35 | 375 | 22 | 325 | 2.33e-50 | 172 |
| Msa1366370 | MtrunA17_Chr7g0238501 | 30.872 | 298 | 177 | 7 | 81 | 359 | 263 | 550 | 4.14e-42 | 155 |
| Msa1366370 | MtrunA17_Chr2g0295991 | 32.967 | 273 | 171 | 4 | 101 | 366 | 220 | 487 | 1.56e-40 | 150 |
| Msa1366370 | MtrunA17_Chr4g0039061 | 31.973 | 294 | 178 | 7 | 80 | 359 | 201 | 486 | 1.40e-39 | 147 |
| Msa1366370 | MtrunA17_Chr7g0256761 | 41.294 | 201 | 95 | 5 | 167 | 362 | 5 | 187 | 3.08e-39 | 139 |
| Msa1366370 | MtrunA17_Chr4g0067301 | 33.977 | 259 | 156 | 5 | 117 | 365 | 245 | 498 | 1.58e-38 | 144 |
| Msa1366370 | MtrunA17_Chr4g0031521 | 28.929 | 280 | 157 | 5 | 117 | 359 | 425 | 699 | 3.89e-32 | 128 |
| Msa1366370 | MtrunA17_Chr4g0054811 | 28.094 | 299 | 156 | 5 | 115 | 359 | 478 | 771 | 8.04e-32 | 127 |
| Msa1366370 | MtrunA17_Chr1g0193691 | 38.202 | 178 | 101 | 3 | 186 | 359 | 715 | 887 | 2.86e-29 | 120 |
| Msa1366370 | MtrunA17_Chr4g0062951 | 35.638 | 188 | 103 | 7 | 115 | 289 | 1 | 183 | 2.83e-27 | 107 |
| Msa1366370 | MtrunA17_Chr5g0430481 | 30.667 | 225 | 114 | 6 | 80 | 303 | 153 | 336 | 3.50e-25 | 105 |
| Msa1366370 | MtrunA17_Chr1g0212961 | 30.579 | 242 | 118 | 8 | 81 | 318 | 126 | 321 | 2.73e-24 | 102 |
| Msa1366370 | MtrunA17_Chr3g0105371 | 28.159 | 277 | 143 | 9 | 80 | 355 | 117 | 338 | 3.42e-24 | 102 |
| Msa1366370 | MtrunA17_Chr3g0105351 | 26.619 | 278 | 146 | 7 | 80 | 355 | 93 | 314 | 1.10e-23 | 100 |
| Msa1366370 | MtrunA17_Chr2g0317021 | 27.640 | 322 | 154 | 11 | 42 | 355 | 82 | 332 | 5.53e-23 | 98.6 |
| Msa1366370 | MtrunA17_Chr4g0050381 | 29.126 | 309 | 150 | 13 | 48 | 353 | 32 | 274 | 1.35e-20 | 90.9 |
| Msa1366370 | MtrunA17_Chr4g0051661 | 28.689 | 244 | 123 | 10 | 81 | 318 | 183 | 381 | 7.21e-20 | 90.5 |
| Msa1366370 | MtrunA17_Chr4g0070871 | 27.667 | 300 | 169 | 10 | 15 | 303 | 185 | 447 | 9.72e-20 | 90.9 |
| Msa1366370 | MtrunA17_Chr3g0115851 | 28.013 | 307 | 156 | 10 | 48 | 353 | 37 | 279 | 1.03e-19 | 88.6 |
| Msa1366370 | MtrunA17_Chr8g0360351 | 26.498 | 317 | 160 | 10 | 42 | 353 | 31 | 279 | 1.48e-19 | 88.2 |
| Msa1366370 | MtrunA17_Chr3g0126511 | 24.691 | 243 | 140 | 6 | 59 | 301 | 107 | 306 | 2.93e-19 | 88.6 |
| Msa1366370 | MtrunA17_Chr1g0150451 | 28.099 | 242 | 128 | 8 | 83 | 320 | 110 | 309 | 3.56e-19 | 87.8 |
| Msa1366370 | MtrunA17_Chr3g0136711 | 26.102 | 295 | 151 | 10 | 83 | 372 | 67 | 299 | 5.62e-19 | 86.7 |
| Msa1366370 | MtrunA17_Chr2g0279151 | 28.674 | 279 | 128 | 12 | 81 | 353 | 65 | 278 | 6.95e-19 | 86.3 |
| Msa1366370 | MtrunA17_Chr7g0223641 | 30.973 | 226 | 111 | 8 | 145 | 358 | 7 | 199 | 1.58e-18 | 83.6 |
| Msa1366370 | MtrunA17_Chr5g0426141 | 28.339 | 307 | 155 | 11 | 48 | 353 | 37 | 279 | 4.46e-18 | 84.0 |
| Msa1366370 | MtrunA17_Chr3g0135961 | 27.152 | 302 | 145 | 12 | 81 | 355 | 286 | 539 | 4.73e-18 | 85.9 |
| Msa1366370 | MtrunA17_Chr3g0138281 | 27.915 | 283 | 143 | 12 | 76 | 353 | 117 | 343 | 6.41e-18 | 84.7 |
| Msa1366370 | MtrunA17_Chr2g0293811 | 26.621 | 293 | 138 | 11 | 80 | 355 | 99 | 331 | 1.38e-17 | 83.6 |
| Msa1366370 | MtrunA17_Chr5g0407161 | 26.502 | 283 | 144 | 10 | 77 | 353 | 119 | 343 | 3.72e-17 | 82.4 |
| Msa1366370 | MtrunA17_Chr1g0158781 | 28.622 | 283 | 164 | 8 | 30 | 312 | 96 | 340 | 5.02e-17 | 82.0 |
| Msa1366370 | MtrunA17_Chr7g0272061 | 32.227 | 211 | 95 | 9 | 161 | 361 | 195 | 367 | 8.24e-17 | 81.3 |
| Msa1366370 | MtrunA17_Chr2g0299981 | 26.800 | 250 | 122 | 7 | 81 | 303 | 267 | 482 | 2.52e-16 | 80.9 |
| Msa1366370 | MtrunA17_Chr3g0112291 | 26.689 | 296 | 153 | 10 | 81 | 355 | 123 | 375 | 3.01e-16 | 79.7 |
| Msa1366370 | MtrunA17_Chr5g0435721 | 26.695 | 236 | 122 | 5 | 81 | 303 | 223 | 420 | 1.76e-15 | 77.8 |
| Msa1366370 | MtrunA17_Chr1g0194191 | 26.400 | 250 | 144 | 9 | 80 | 320 | 117 | 335 | 3.59e-15 | 76.6 |
| Msa1366370 | MtrunA17_Chr1g0150071 | 25.461 | 271 | 122 | 11 | 80 | 303 | 51 | 288 | 3.63e-15 | 76.3 |
| Msa1366370 | MtrunA17_Chr4g0065141 | 25.874 | 286 | 148 | 12 | 80 | 357 | 123 | 352 | 5.81e-15 | 75.9 |
| Msa1366370 | MtrunA17_Chr3g0144111 | 24.503 | 302 | 139 | 9 | 79 | 374 | 25 | 243 | 5.29e-14 | 71.6 |
| Msa1366370 | MtrunA17_Chr1g0171571 | 25.606 | 289 | 155 | 11 | 72 | 355 | 411 | 644 | 7.50e-14 | 73.2 |
| Msa1366370 | MtrunA17_Chr3g0136811 | 25.279 | 269 | 123 | 10 | 80 | 302 | 51 | 287 | 9.35e-14 | 72.0 |
| Msa1366370 | MtrunA17_Chr4g0001761 | 24.058 | 345 | 177 | 10 | 72 | 374 | 46 | 347 | 1.16e-13 | 71.6 |
| Msa1366370 | MtrunA17_Chr1g0150781 | 26.087 | 299 | 152 | 12 | 81 | 355 | 290 | 543 | 1.38e-13 | 72.4 |
| Msa1366370 | MtrunA17_Chr6g0483411 | 25.746 | 268 | 140 | 10 | 84 | 332 | 82 | 309 | 1.60e-13 | 70.9 |
| Msa1366370 | MtrunA17_Chr5g0396731 | 26.280 | 293 | 172 | 10 | 74 | 359 | 99 | 354 | 6.26e-13 | 69.3 |
| Msa1366370 | MtrunA17_Chr8g0342431 | 29.379 | 177 | 105 | 5 | 162 | 336 | 210 | 368 | 1.30e-12 | 68.9 |
| Msa1366370 | MtrunA17_Chr7g0221691 | 28.643 | 199 | 108 | 8 | 162 | 358 | 245 | 411 | 2.66e-12 | 68.2 |
| Msa1366370 | MtrunA17_Chr1g0192421 | 25.987 | 304 | 158 | 14 | 81 | 357 | 89 | 352 | 3.63e-12 | 67.0 |
| Msa1366370 | MtrunA17_Chr3g0127091 | 25.101 | 247 | 149 | 6 | 80 | 307 | 88 | 317 | 4.22e-12 | 67.0 |
| Msa1366370 | MtrunA17_Chr2g0295401 | 26.797 | 306 | 153 | 15 | 81 | 357 | 92 | 355 | 6.90e-12 | 66.2 |
| Msa1366370 | MtrunA17_Chr4g0004971 | 27.208 | 283 | 149 | 14 | 81 | 332 | 78 | 334 | 5.22e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366370 | AT4G38520.2 | 73.724 | 392 | 103 | 0 | 1 | 392 | 1 | 392 | 0.0 | 623 |
| Msa1366370 | AT4G38520.1 | 73.724 | 392 | 103 | 0 | 1 | 392 | 1 | 392 | 0.0 | 623 |
| Msa1366370 | AT5G66080.1 | 74.346 | 382 | 97 | 1 | 1 | 381 | 1 | 382 | 0.0 | 611 |
| Msa1366370 | AT3G51370.1 | 73.491 | 381 | 96 | 2 | 1 | 381 | 1 | 376 | 0.0 | 600 |
| Msa1366370 | AT3G51370.3 | 73.491 | 381 | 96 | 2 | 1 | 381 | 1 | 376 | 0.0 | 600 |
| Msa1366370 | AT3G12620.2 | 67.200 | 375 | 122 | 1 | 3 | 377 | 5 | 378 | 0.0 | 537 |
| Msa1366370 | AT3G12620.1 | 67.200 | 375 | 122 | 1 | 3 | 377 | 5 | 378 | 0.0 | 537 |
| Msa1366370 | AT3G55050.1 | 64.042 | 381 | 128 | 3 | 8 | 385 | 9 | 383 | 0.0 | 518 |
| Msa1366370 | AT3G55050.2 | 64.042 | 381 | 128 | 3 | 8 | 385 | 9 | 383 | 0.0 | 518 |
| Msa1366370 | AT5G66080.2 | 74.818 | 274 | 69 | 0 | 108 | 381 | 5 | 278 | 1.11e-162 | 458 |
| Msa1366370 | AT3G51370.2 | 70.748 | 294 | 82 | 2 | 88 | 381 | 2 | 291 | 1.96e-158 | 447 |
| Msa1366370 | AT5G02760.1 | 60.976 | 369 | 138 | 4 | 8 | 376 | 1 | 363 | 1.10e-156 | 446 |
| Msa1366370 | AT3G17090.1 | 55.703 | 377 | 142 | 5 | 1 | 363 | 1 | 366 | 5.52e-150 | 430 |
| Msa1366370 | AT4G33920.1 | 52.344 | 384 | 155 | 5 | 1 | 381 | 1 | 359 | 6.31e-142 | 409 |
| Msa1366370 | AT5G06750.3 | 55.780 | 346 | 139 | 4 | 34 | 375 | 43 | 378 | 1.88e-139 | 403 |
| Msa1366370 | AT5G06750.1 | 55.780 | 346 | 139 | 4 | 34 | 375 | 43 | 378 | 1.88e-139 | 403 |
| Msa1366370 | AT3G17090.2 | 52.761 | 326 | 129 | 5 | 1 | 312 | 1 | 315 | 1.52e-118 | 347 |
| Msa1366370 | AT4G33920.2 | 55.000 | 280 | 118 | 3 | 105 | 381 | 2 | 276 | 1.20e-110 | 327 |
| Msa1366370 | AT5G06750.2 | 52.805 | 303 | 131 | 5 | 77 | 375 | 2 | 296 | 4.38e-108 | 320 |
| Msa1366370 | AT4G33920.3 | 55.777 | 251 | 103 | 3 | 134 | 381 | 1 | 246 | 1.64e-100 | 300 |
| Msa1366370 | AT3G16560.1 | 30.341 | 323 | 181 | 8 | 81 | 365 | 175 | 491 | 5.42e-40 | 149 |
| Msa1366370 | AT3G16560.4 | 30.341 | 323 | 181 | 8 | 81 | 365 | 175 | 491 | 5.42e-40 | 149 |
| Msa1366370 | AT3G16560.2 | 30.341 | 323 | 181 | 8 | 81 | 365 | 175 | 491 | 5.42e-40 | 149 |
| Msa1366370 | AT5G02400.1 | 32.258 | 279 | 147 | 6 | 118 | 359 | 396 | 669 | 6.99e-38 | 145 |
| Msa1366370 | AT3G09400.1 | 32.609 | 276 | 143 | 8 | 118 | 359 | 379 | 645 | 1.49e-37 | 144 |
| Msa1366370 | AT1G07630.1 | 29.643 | 280 | 155 | 5 | 117 | 359 | 383 | 657 | 1.12e-35 | 139 |
| Msa1366370 | AT2G28890.1 | 29.930 | 284 | 154 | 6 | 116 | 359 | 371 | 649 | 9.95e-35 | 136 |
| Msa1366370 | AT2G35350.1 | 28.716 | 296 | 160 | 5 | 115 | 364 | 489 | 779 | 2.81e-34 | 135 |
| Msa1366370 | AT3G16560.3 | 30.208 | 288 | 157 | 8 | 81 | 330 | 175 | 456 | 5.45e-32 | 126 |
| Msa1366370 | AT1G07160.1 | 29.537 | 281 | 143 | 7 | 77 | 355 | 149 | 376 | 4.26e-29 | 117 |
| Msa1366370 | AT3G09400.2 | 31.818 | 242 | 122 | 8 | 118 | 325 | 379 | 611 | 3.24e-28 | 117 |
| Msa1366370 | AT2G40180.1 | 28.912 | 294 | 146 | 11 | 73 | 359 | 152 | 389 | 1.07e-27 | 113 |
| Msa1366370 | AT2G46920.3 | 35.106 | 188 | 112 | 4 | 186 | 369 | 667 | 848 | 1.17e-27 | 115 |
| Msa1366370 | AT2G46920.1 | 35.106 | 188 | 112 | 4 | 186 | 369 | 667 | 848 | 1.17e-27 | 115 |
| Msa1366370 | AT2G46920.2 | 35.106 | 188 | 112 | 4 | 186 | 369 | 667 | 848 | 1.17e-27 | 115 |
| Msa1366370 | AT2G46920.4 | 35.106 | 188 | 112 | 4 | 186 | 369 | 667 | 848 | 1.17e-27 | 115 |
| Msa1366370 | AT2G30020.1 | 28.727 | 275 | 140 | 8 | 83 | 355 | 172 | 392 | 7.82e-25 | 105 |
| Msa1366370 | AT1G67820.2 | 29.333 | 225 | 116 | 5 | 80 | 302 | 114 | 297 | 3.04e-23 | 100 |
| Msa1366370 | AT1G67820.1 | 29.333 | 225 | 116 | 5 | 80 | 302 | 150 | 333 | 3.62e-23 | 101 |
| Msa1366370 | AT4G28400.3 | 28.374 | 289 | 153 | 12 | 42 | 324 | 10 | 250 | 4.27e-21 | 92.4 |
| Msa1366370 | AT4G28400.1 | 28.374 | 289 | 153 | 12 | 42 | 324 | 32 | 272 | 6.89e-21 | 92.0 |
| Msa1366370 | AT1G43900.1 | 29.433 | 282 | 133 | 10 | 75 | 353 | 148 | 366 | 8.83e-21 | 93.2 |
| Msa1366370 | AT2G20630.1 | 30.165 | 242 | 119 | 10 | 84 | 319 | 66 | 263 | 9.18e-21 | 91.7 |
| Msa1366370 | AT4G31750.2 | 27.642 | 246 | 131 | 8 | 83 | 323 | 66 | 269 | 1.13e-20 | 92.0 |
| Msa1366370 | AT4G31750.1 | 27.642 | 246 | 131 | 7 | 83 | 323 | 66 | 269 | 1.21e-20 | 92.0 |
| Msa1366370 | AT4G31750.3 | 27.642 | 246 | 131 | 7 | 83 | 323 | 66 | 269 | 1.21e-20 | 92.0 |
| Msa1366370 | AT1G34750.2 | 26.923 | 338 | 173 | 12 | 19 | 355 | 17 | 281 | 1.70e-20 | 91.3 |
| Msa1366370 | AT1G34750.1 | 26.923 | 338 | 173 | 12 | 19 | 355 | 17 | 281 | 1.70e-20 | 91.3 |
| Msa1366370 | AT1G34750.3 | 26.923 | 338 | 173 | 12 | 19 | 355 | 17 | 281 | 1.70e-20 | 91.3 |
| Msa1366370 | AT2G20630.2 | 30.165 | 242 | 119 | 10 | 84 | 319 | 66 | 263 | 1.74e-20 | 91.3 |
| Msa1366370 | AT4G26080.1 | 26.829 | 287 | 162 | 9 | 81 | 355 | 172 | 422 | 2.34e-20 | 92.8 |
| Msa1366370 | AT5G53140.1 | 24.126 | 286 | 169 | 9 | 36 | 319 | 93 | 332 | 1.73e-19 | 90.1 |
| Msa1366370 | AT5G53140.2 | 24.126 | 286 | 169 | 9 | 36 | 319 | 93 | 332 | 1.73e-19 | 90.1 |
| Msa1366370 | AT5G10740.1 | 27.572 | 243 | 128 | 8 | 83 | 320 | 66 | 265 | 1.98e-19 | 89.4 |
| Msa1366370 | AT5G10740.2 | 27.572 | 243 | 128 | 8 | 83 | 320 | 66 | 265 | 1.98e-19 | 89.4 |
| Msa1366370 | AT1G22280.3 | 28.846 | 312 | 153 | 11 | 48 | 353 | 36 | 284 | 2.41e-19 | 87.8 |
| Msa1366370 | AT5G24940.1 | 27.347 | 245 | 130 | 9 | 81 | 320 | 64 | 265 | 6.25e-19 | 88.6 |
| Msa1366370 | AT1G78200.1 | 27.915 | 283 | 153 | 10 | 48 | 324 | 35 | 272 | 6.65e-19 | 86.7 |
| Msa1366370 | AT1G78200.3 | 27.915 | 283 | 153 | 10 | 48 | 324 | 35 | 272 | 6.65e-19 | 86.7 |
| Msa1366370 | AT1G78200.2 | 27.915 | 283 | 153 | 10 | 48 | 324 | 35 | 272 | 6.65e-19 | 86.7 |
| Msa1366370 | AT2G25620.1 | 25.914 | 301 | 156 | 11 | 65 | 355 | 113 | 356 | 7.73e-19 | 87.8 |
| Msa1366370 | AT2G25620.2 | 25.914 | 301 | 156 | 11 | 65 | 355 | 113 | 356 | 7.73e-19 | 87.8 |
| Msa1366370 | AT1G22280.1 | 29.355 | 310 | 148 | 12 | 48 | 353 | 36 | 278 | 9.50e-19 | 86.3 |
| Msa1366370 | AT2G33700.1 | 27.915 | 283 | 135 | 11 | 79 | 353 | 121 | 342 | 3.28e-18 | 85.9 |
| Msa1366370 | AT1G78200.5 | 27.574 | 272 | 146 | 10 | 59 | 324 | 1 | 227 | 5.05e-18 | 83.2 |
| Msa1366370 | AT1G78200.4 | 27.574 | 272 | 146 | 10 | 59 | 324 | 1 | 227 | 5.05e-18 | 83.2 |
| Msa1366370 | AT1G07430.1 | 28.270 | 237 | 118 | 6 | 81 | 303 | 157 | 355 | 7.27e-18 | 85.5 |
| Msa1366370 | AT3G15260.2 | 26.844 | 339 | 171 | 13 | 19 | 353 | 21 | 286 | 3.57e-17 | 81.6 |
| Msa1366370 | AT3G15260.1 | 26.844 | 339 | 171 | 13 | 19 | 353 | 21 | 286 | 3.57e-17 | 81.6 |
| Msa1366370 | AT5G57050.2 | 25.965 | 285 | 168 | 7 | 81 | 355 | 120 | 371 | 1.03e-16 | 81.6 |
| Msa1366370 | AT5G57050.1 | 25.965 | 285 | 168 | 7 | 81 | 355 | 160 | 411 | 1.04e-16 | 81.6 |
| Msa1366370 | AT3G51470.2 | 26.000 | 250 | 137 | 7 | 79 | 320 | 60 | 269 | 1.69e-16 | 80.1 |
| Msa1366370 | AT3G51470.1 | 26.000 | 250 | 137 | 7 | 79 | 320 | 104 | 313 | 1.78e-16 | 80.5 |
| Msa1366370 | AT4G08260.1 | 26.007 | 273 | 117 | 8 | 83 | 355 | 21 | 208 | 2.94e-16 | 77.4 |
| Msa1366370 | AT1G18030.1 | 27.626 | 257 | 133 | 9 | 83 | 320 | 111 | 333 | 3.84e-16 | 79.7 |
| Msa1366370 | AT3G16800.2 | 27.243 | 301 | 150 | 13 | 80 | 355 | 92 | 348 | 4.54e-16 | 79.3 |
| Msa1366370 | AT3G16800.1 | 27.243 | 301 | 150 | 13 | 80 | 355 | 92 | 348 | 4.54e-16 | 79.3 |
| Msa1366370 | AT3G16800.3 | 27.243 | 301 | 150 | 13 | 80 | 355 | 92 | 348 | 4.54e-16 | 79.3 |
| Msa1366370 | AT1G72770.4 | 26.710 | 307 | 154 | 10 | 79 | 355 | 236 | 501 | 5.02e-16 | 80.1 |
| Msa1366370 | AT1G72770.1 | 26.710 | 307 | 154 | 10 | 79 | 355 | 236 | 501 | 5.02e-16 | 80.1 |
| Msa1366370 | AT1G72770.3 | 26.710 | 307 | 154 | 10 | 79 | 355 | 236 | 501 | 5.02e-16 | 80.1 |
| Msa1366370 | AT1G17550.1 | 26.646 | 319 | 156 | 13 | 72 | 355 | 226 | 501 | 5.20e-16 | 80.1 |
| Msa1366370 | AT1G17550.2 | 26.646 | 319 | 156 | 13 | 72 | 355 | 226 | 501 | 5.20e-16 | 80.1 |
| Msa1366370 | AT4G28400.2 | 27.559 | 254 | 133 | 10 | 42 | 291 | 32 | 238 | 2.35e-15 | 75.9 |
| Msa1366370 | AT3G62260.3 | 27.692 | 260 | 145 | 10 | 71 | 319 | 17 | 244 | 2.78e-15 | 76.3 |
| Msa1366370 | AT3G05640.2 | 27.797 | 295 | 155 | 13 | 81 | 355 | 93 | 349 | 3.70e-15 | 76.6 |
| Msa1366370 | AT3G05640.1 | 27.797 | 295 | 155 | 13 | 81 | 355 | 93 | 349 | 3.70e-15 | 76.6 |
| Msa1366370 | AT3G05640.3 | 27.797 | 295 | 155 | 13 | 81 | 355 | 93 | 349 | 3.70e-15 | 76.6 |
| Msa1366370 | AT5G26010.1 | 27.027 | 296 | 161 | 11 | 78 | 355 | 66 | 324 | 5.36e-15 | 75.9 |
| Msa1366370 | AT5G59220.1 | 27.984 | 243 | 122 | 8 | 81 | 310 | 148 | 350 | 5.81e-15 | 76.6 |
| Msa1366370 | AT3G62260.1 | 27.692 | 260 | 145 | 10 | 71 | 319 | 106 | 333 | 7.07e-15 | 75.9 |
| Msa1366370 | AT3G62260.2 | 27.692 | 260 | 145 | 10 | 71 | 319 | 107 | 334 | 8.01e-15 | 75.9 |
| Msa1366370 | AT4G31860.3 | 25.830 | 271 | 121 | 11 | 80 | 303 | 51 | 288 | 1.21e-14 | 74.3 |
| Msa1366370 | AT4G31860.1 | 25.830 | 271 | 121 | 11 | 80 | 303 | 51 | 288 | 1.61e-14 | 74.7 |
| Msa1366370 | AT3G16800.4 | 29.515 | 227 | 110 | 9 | 141 | 355 | 65 | 253 | 1.64e-14 | 73.6 |
| Msa1366370 | AT3G16800.6 | 29.515 | 227 | 110 | 9 | 141 | 355 | 65 | 253 | 1.64e-14 | 73.6 |
| Msa1366370 | AT5G27930.1 | 29.064 | 203 | 97 | 8 | 161 | 354 | 189 | 353 | 6.26e-14 | 73.2 |
| Msa1366370 | AT5G27930.2 | 29.064 | 203 | 97 | 8 | 161 | 354 | 189 | 353 | 6.26e-14 | 73.2 |
| Msa1366370 | AT1G34750.4 | 24.818 | 274 | 152 | 9 | 19 | 291 | 17 | 237 | 2.95e-13 | 69.7 |
| Msa1366370 | AT2G34740.1 | 24.176 | 273 | 144 | 9 | 83 | 353 | 121 | 332 | 4.79e-13 | 70.1 |
| Msa1366370 | AT1G48040.1 | 25.904 | 332 | 162 | 14 | 49 | 357 | 81 | 351 | 7.57e-13 | 69.7 |
| Msa1366370 | AT1G79630.8 | 28.750 | 240 | 98 | 10 | 154 | 365 | 212 | 406 | 4.68e-12 | 67.8 |
| Msa1366370 | AT1G79630.1 | 28.750 | 240 | 98 | 10 | 154 | 365 | 216 | 410 | 4.72e-12 | 67.8 |
| Msa1366370 | AT1G79630.6 | 28.750 | 240 | 98 | 10 | 154 | 365 | 106 | 300 | 5.12e-12 | 67.4 |
| Msa1366370 | AT1G79630.3 | 28.750 | 240 | 98 | 10 | 154 | 365 | 106 | 300 | 5.12e-12 | 67.4 |
| Msa1366370 | AT1G79630.4 | 28.750 | 240 | 98 | 10 | 154 | 365 | 106 | 300 | 5.12e-12 | 67.4 |
| Msa1366370 | AT1G79630.5 | 28.750 | 240 | 98 | 10 | 154 | 365 | 106 | 300 | 5.12e-12 | 67.4 |
| Msa1366370 | AT1G79630.2 | 28.750 | 240 | 98 | 10 | 154 | 365 | 146 | 340 | 7.17e-12 | 67.0 |
| Msa1366370 | AT1G79630.7 | 28.750 | 240 | 98 | 10 | 154 | 365 | 146 | 340 | 7.17e-12 | 67.0 |
| Msa1366370 | AT1G18030.2 | 26.577 | 222 | 115 | 8 | 84 | 291 | 112 | 299 | 1.54e-11 | 65.1 |
| Msa1366370 | AT4G32950.1 | 26.255 | 259 | 151 | 10 | 79 | 325 | 70 | 300 | 4.77e-11 | 63.9 |
| Msa1366370 | AT2G40860.4 | 25.267 | 281 | 149 | 10 | 81 | 355 | 325 | 550 | 8.44e-11 | 63.9 |
Find 129 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTTAATTTAATTTAAT+TGG | 0.103600 | tig0018449:+18814 | Msa1366370:three_prime_UTR |
| TAGATCTGGGTATTTATTTA+TGG | 0.142679 | tig0018449:-14984 | None:intergenic |
| GATCTTACCAAAGAATTTAT+TGG | 0.192729 | tig0018449:-15054 | None:intergenic |
| TGGTGATTCCAGGGCTGTTT+TGG | 0.205002 | tig0018449:+17374 | Msa1366370:CDS |
| CACCAAGATTTGCTATATAA+AGG | 0.237162 | tig0018449:-17356 | None:intergenic |
| TCTTCATCCAATAAATTCTT+TGG | 0.257491 | tig0018449:+15047 | Msa1366370:five_prime_UTR |
| CTGATCTTCCAGCAAGTTAT+TGG | 0.273921 | tig0018449:-15810 | None:intergenic |
| TTCCCTGGTATTTCTGTTAG+AGG | 0.293299 | tig0018449:+18715 | Msa1366370:CDS |
| TTGAATGAGTCTGGCCCTTA+TGG | 0.294051 | tig0018449:+15860 | Msa1366370:CDS |
| CTACTACTTTACTTGTGAAA+TGG | 0.300020 | tig0018449:-14896 | None:intergenic |
| GGCCTGCTTTCGGCCGGGTT+CGG | 0.311713 | tig0018449:+15676 | Msa1366370:CDS |
| TACTCTTAAGATGTTGAAAT+AGG | 0.323585 | tig0018449:-15946 | None:intergenic |
| GGCCCTTATGGAACCTTTGT+TGG | 0.326218 | tig0018449:+15872 | Msa1366370:CDS |
| GCTGCAATTTGCGGTGAAAT+TGG | 0.328123 | tig0018449:-17291 | None:intergenic |
| TTATCTGTTGTAGTAGTAAA+AGG | 0.336468 | tig0018449:-18772 | None:intergenic |
| ATTGTTGTTGTGAGGATTGC+AGG | 0.346192 | tig0018449:+15534 | Msa1366370:five_prime_UTR |
| TAGCAAATCTTGGTGATTCC+AGG | 0.350723 | tig0018449:+17364 | Msa1366370:CDS |
| TAATTTAATTTAATTTAATT+GGG | 0.357456 | tig0018449:+18815 | Msa1366370:three_prime_UTR |
| TACTACTTTACTTGTGAAAT+GGG | 0.361108 | tig0018449:-14895 | None:intergenic |
| ACCAAGATTTGCTATATAAA+GGG | 0.370067 | tig0018449:-17355 | None:intergenic |
| ACAACAATATTTGAATCATC+AGG | 0.370480 | tig0018449:-17498 | None:intergenic |
| TTAATGTCCACTTCATAAAC+AGG | 0.370496 | tig0018449:+18951 | Msa1366370:three_prime_UTR |
| CTTGTTGGTGTTATTTGTAA+TGG | 0.371085 | tig0018449:+17330 | Msa1366370:CDS |
| ATAAAATTGACCGTGGAGTT+CGG | 0.374935 | tig0018449:+18614 | Msa1366370:CDS |
| GTTGGGTCTTGCTGTCTTGT+TGG | 0.378018 | tig0018449:+17315 | Msa1366370:CDS |
| ACCCTTTATATAGCAAATCT+TGG | 0.384018 | tig0018449:+17354 | Msa1366370:CDS |
| GCGTGTGAAATCATTAGATC+TGG | 0.385126 | tig0018449:-14998 | None:intergenic |
| TTTGAAGGCCTGCTTTCGGC+CGG | 0.392079 | tig0018449:+15670 | Msa1366370:CDS |
| GGAAGATTAGTTAAAGCAAC+TGG | 0.395251 | tig0018449:+17396 | Msa1366370:CDS |
| TTTATTATATTTGCATCTGA+TGG | 0.398456 | tig0018449:+17966 | Msa1366370:CDS |
| TATTTGCATCTGATGGGCTC+TGG | 0.400975 | tig0018449:+17973 | Msa1366370:CDS |
| TTGGTGAACCTCTGCTTAGC+TGG | 0.401287 | tig0018449:+14814 | Msa1366370:five_prime_UTR |
| GTAAACAAGATGGACTATTA+TGG | 0.406307 | tig0018449:+15732 | Msa1366370:CDS |
| TCTCTCTCTCTATCTGATAG+TGG | 0.407694 | tig0018449:+14737 | Msa1366370:five_prime_UTR |
| AGTCGAAACTTGGCATATAA+TGG | 0.416306 | tig0018449:-17867 | None:intergenic |
| AACTGATGCACTAGTATTGA+TGG | 0.417738 | tig0018449:-17927 | None:intergenic |
| TAATTGGGATCTATACTAGT+AGG | 0.418748 | tig0018449:+18830 | Msa1366370:three_prime_UTR |
| TGCTTTCGGCCGGGTTCGGA+TGG | 0.422995 | tig0018449:+15680 | Msa1366370:CDS |
| AGTTTGAGTTTGAATGAGTC+TGG | 0.426624 | tig0018449:+15851 | Msa1366370:CDS |
| TTGATAAACCGCGACGTCTC+AGG | 0.427072 | tig0018449:-15917 | None:intergenic |
| TGAAATCCTTGATGGTTGTT+TGG | 0.428633 | tig0018449:+15613 | Msa1366370:five_prime_UTR |
| GGTGAAATGAGGTATGTTAT+CGG | 0.430907 | tig0018449:+15634 | Msa1366370:exon |
| TTAGATGTTGAAATCCTTGA+TGG | 0.431122 | tig0018449:+15605 | Msa1366370:five_prime_UTR |
| GACCCAACTGCTGCAATTTG+CGG | 0.431869 | tig0018449:-17300 | None:intergenic |
| GGTATTTCTGTTAGAGGAGG+TGG | 0.433488 | tig0018449:+18721 | Msa1366370:CDS |
| TTCAGACAGATTGTTAAAGA+TGG | 0.434159 | tig0018449:-18914 | None:intergenic |
| AGAAGAGGGGTTTATGTCAC+TGG | 0.439976 | tig0018449:+17254 | Msa1366370:CDS |
| TCACCGCAAATTGCAGCAGT+TGG | 0.449592 | tig0018449:+17297 | Msa1366370:CDS |
| ATTTGCATCTGATGGGCTCT+GGG | 0.451624 | tig0018449:+17974 | Msa1366370:CDS |
| GATGGTTCTGAGCTCAGTAT+TGG | 0.453050 | tig0018449:-17909 | None:intergenic |
| GATCAGAGCCAGATTGAATC+TGG | 0.453389 | tig0018449:+15827 | Msa1366370:CDS |
| TAAACCCCTCTTCTGTTGCT+TGG | 0.457911 | tig0018449:-17245 | None:intergenic |
| CACCGCAAATTGCAGCAGTT+GGG | 0.458676 | tig0018449:+17298 | Msa1366370:CDS |
| ATCCGAACCCGGCCGAAAGC+AGG | 0.463029 | tig0018449:-15678 | None:intergenic |
| CTTTACTTGTGAAATGGGAA+TGG | 0.463533 | tig0018449:-14890 | None:intergenic |
| AGTTCAAGCCAATAACTTGC+TGG | 0.463611 | tig0018449:+15802 | Msa1366370:CDS |
| TTGAAGGCCTGCTTTCGGCC+GGG | 0.465199 | tig0018449:+15671 | Msa1366370:CDS |
| CGGCTGAGGAAGTCGAAACT+TGG | 0.465922 | tig0018449:-17877 | None:intergenic |
| TTTACTTGTGAAATGGGAAT+GGG | 0.467549 | tig0018449:-14889 | None:intergenic |
| ACCTTTGTTGGCGTCTATGA+TGG | 0.469469 | tig0018449:+15884 | Msa1366370:CDS |
| ACGCCAACAAAGGTTCCATA+AGG | 0.475151 | tig0018449:-15875 | None:intergenic |
| CCTCAGATTTCTAGATGCAT+TGG | 0.482645 | tig0018449:+17807 | Msa1366370:intron |
| TCAAACTACCAGATTCAATC+TGG | 0.487886 | tig0018449:-15835 | None:intergenic |
| GCGCGCACAACGTCAGATGC+TGG | 0.493872 | tig0018449:+15707 | Msa1366370:CDS |
| TTATTATATTTGCATCTGAT+GGG | 0.499462 | tig0018449:+17967 | Msa1366370:CDS |
| CTAAGCAGAGGTTCACCAAT+GGG | 0.500506 | tig0018449:-14810 | None:intergenic |
| CGCGCATATCCATCCGAACC+CGG | 0.515703 | tig0018449:-15689 | None:intergenic |
| TAATCTTCCCAAAACAGCCC+TGG | 0.516311 | tig0018449:-17382 | None:intergenic |
| CATGTTGTTGTAGTTTGTGG+TGG | 0.520500 | tig0018449:+15493 | Msa1366370:intron |
| CGCCAACAAAGGTTCCATAA+GGG | 0.521754 | tig0018449:-15874 | None:intergenic |
| ATCAATAGAGTCTATAAGAC+AGG | 0.522519 | tig0018449:+17458 | Msa1366370:CDS |
| CTCAGTATTGGCCTCTTGAA+CGG | 0.523336 | tig0018449:-17897 | None:intergenic |
| ACTACTACAACAGATAATGA+TGG | 0.526156 | tig0018449:+18778 | Msa1366370:CDS |
| GAATGGGCAGGCAAGGAAGA+AGG | 0.527492 | tig0018449:-14873 | None:intergenic |
| GCATAATGTTTGGCGTGTGA+AGG | 0.529364 | tig0018449:+17527 | Msa1366370:CDS |
| CTATTATGGTATAAAGACTC+AGG | 0.532513 | tig0018449:+15746 | Msa1366370:CDS |
| CATAATGTTTGGCGTGTGAA+GGG | 0.533025 | tig0018449:+17528 | Msa1366370:CDS |
| GATGGTTGTTTGGTGAAATG+AGG | 0.537890 | tig0018449:+15623 | Msa1366370:five_prime_UTR |
| GCATTCCAAGCAACAGAAGA+GGG | 0.537905 | tig0018449:+17240 | Msa1366370:CDS |
| CCTGGTATTTCTGTTAGAGG+AGG | 0.538502 | tig0018449:+18718 | Msa1366370:CDS |
| GCAAGCACTGTGAAGTTCCC+TGG | 0.540576 | tig0018449:+18700 | Msa1366370:CDS |
| GACTCAGGGCAGCACATATG+TGG | 0.544741 | tig0018449:+15761 | Msa1366370:CDS |
| CCTCCTCTAACAGAAATACC+AGG | 0.545986 | tig0018449:-18718 | None:intergenic |
| AATATAATAAATTGATCTTG+AGG | 0.547024 | tig0018449:-17954 | None:intergenic |
| ATTTCACCAAACAACCATCA+AGG | 0.547233 | tig0018449:-15619 | None:intergenic |
| GACTTCCTCAGCCGTTCAAG+AGG | 0.548513 | tig0018449:+17886 | Msa1366370:CDS |
| ATTGGCCTCTTGAACGGCTG+AGG | 0.549999 | tig0018449:-17891 | None:intergenic |
| GGAGTAACATAGCATAGCAT+TGG | 0.553344 | tig0018449:+14773 | Msa1366370:five_prime_UTR |
| AAGAAGGAGTGAGGCAGACA+AGG | 0.556916 | tig0018449:-14857 | None:intergenic |
| TGTCACTGGTTTCGCAGCTG+TGG | 0.558786 | tig0018449:+17268 | Msa1366370:CDS |
| TCAGGGAATTGCAAGGAGGA+TGG | 0.563559 | tig0018449:+18534 | Msa1366370:intron |
| CTATAGTGAGTGAAAGCTGT+AGG | 0.567762 | tig0018449:+15582 | Msa1366370:five_prime_UTR |
| CGTGTGAAATCATTAGATCT+GGG | 0.567844 | tig0018449:-14997 | None:intergenic |
| TCATCATCATTGTTGTTGTG+AGG | 0.570191 | tig0018449:+15526 | Msa1366370:five_prime_UTR |
| AGCAAATCTTGGTGATTCCA+GGG | 0.574596 | tig0018449:+17365 | Msa1366370:CDS |
| TAATGGTTCTCTATTGAACT+CGG | 0.575111 | tig0018449:-17850 | None:intergenic |
| CAACAATATTTGAATCATCA+GGG | 0.575478 | tig0018449:-17497 | None:intergenic |
| GTCAGTTGATGTAATTCGCA+AGG | 0.576319 | tig0018449:+17218 | Msa1366370:CDS |
| GATGCTGGAGGTAAACAAGA+TGG | 0.576681 | tig0018449:+15722 | Msa1366370:CDS |
| GATAGTGGTTCAATAAACAT+TGG | 0.577778 | tig0018449:+14752 | Msa1366370:five_prime_UTR |
| GTGCTCTGTTGATAATTGCA+TGG | 0.581373 | tig0018449:-17430 | None:intergenic |
| CTTGTGAAATGGGAATGGGC+AGG | 0.586442 | tig0018449:-14885 | None:intergenic |
| CAATTACAGTGATATCATCA+TGG | 0.586712 | tig0018449:-18645 | None:intergenic |
| GAAATGGGAATGGGCAGGCA+AGG | 0.588709 | tig0018449:-14880 | None:intergenic |
| TATTGTTTCAGGGAATTGCA+AGG | 0.591708 | tig0018449:+18527 | Msa1366370:intron |
| AATGAGTATCTTACAGCGCG+AGG | 0.594025 | tig0018449:-18041 | None:intergenic |
| GGCATTCCAAGCAACAGAAG+AGG | 0.600647 | tig0018449:+17239 | Msa1366370:CDS |
| ATTAGTTAAAGCAACTGGTG+AGG | 0.614946 | tig0018449:+17401 | Msa1366370:CDS |
| GGAAATGTCGCCGAACTCCA+CGG | 0.621058 | tig0018449:-18624 | None:intergenic |
| GCTAAGCAGAGGTTCACCAA+TGG | 0.624209 | tig0018449:-14811 | None:intergenic |
| GATTTAAATAAAATTGACCG+TGG | 0.627009 | tig0018449:+18607 | Msa1366370:CDS |
| CATAGCATAGCATTGGAATG+TGG | 0.634142 | tig0018449:+14780 | Msa1366370:five_prime_UTR |
| GAATGTGGTGTGGAGCCCAT+TGG | 0.634998 | tig0018449:+14795 | Msa1366370:five_prime_UTR |
| GGTTGGAGCCAGCTAAGCAG+AGG | 0.640777 | tig0018449:-14822 | None:intergenic |
| CAGGCAAGGAAGAAGGAGTG+AGG | 0.652455 | tig0018449:-14866 | None:intergenic |
| TAGCATCCCTCACAACACAT+TGG | 0.653156 | tig0018449:+18747 | Msa1366370:CDS |
| CATTCCAAGCAACAGAAGAG+GGG | 0.653186 | tig0018449:+17241 | Msa1366370:CDS |
| TCCATCATAGACGCCAACAA+AGG | 0.655109 | tig0018449:-15885 | None:intergenic |
| CATAGCATTGGAATGTGGTG+TGG | 0.657707 | tig0018449:+14785 | Msa1366370:five_prime_UTR |
| GTTGGCGTCTATGATGGACA+TGG | 0.658289 | tig0018449:+15890 | Msa1366370:CDS |
| TATTATGGTATAAAGACTCA+GGG | 0.658621 | tig0018449:+15747 | Msa1366370:CDS |
| AAGGTGCCAATGTGTTGTGA+GGG | 0.673166 | tig0018449:-18753 | None:intergenic |
| CTCCTCTAACAGAAATACCA+GGG | 0.674687 | tig0018449:-18717 | None:intergenic |
| AAAGGTGCCAATGTGTTGTG+AGG | 0.683532 | tig0018449:-18754 | None:intergenic |
| ATGGAGGTCCTGAGACGTCG+CGG | 0.688834 | tig0018449:+15909 | Msa1366370:CDS |
| CGCACAACGTCAGATGCTGG+AGG | 0.694925 | tig0018449:+15710 | Msa1366370:CDS |
| CAATCTGTCTGAAAGAACTG+TGG | 0.707917 | tig0018449:+18924 | Msa1366370:three_prime_UTR |
| TGTTTCAGGGAATTGCAAGG+AGG | 0.712929 | tig0018449:+18530 | Msa1366370:intron |
| GGCGTCTATGATGGACATGG+AGG | 0.748970 | tig0018449:+15893 | Msa1366370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTAATTTAATTTAAT+TGG | + | tig0018449:18814-18833 | Msa1366370:three_prime_UTR | 0.0% |
| !!! | TAATTTAATTTAATTTAATT+GGG | + | tig0018449:18815-18834 | Msa1366370:three_prime_UTR | 0.0% |
| !! | ACATATAAAAAAATCAATTA+TGG | - | tig0018449:15462-15481 | None:intergenic | 10.0% |
| !!! | TTTTTAATCTTAACTAATAA+TGG | - | tig0018449:18102-18121 | None:intergenic | 10.0% |
| !!! | GATTAAAATCTTGATTTTTA+TGG | + | tig0018449:15113-15132 | Msa1366370:intron | 15.0% |
| !! | ATAAACTGAAATATAAACTA+TGG | - | tig0018449:15423-15442 | None:intergenic | 15.0% |
| !!! | ATAAATTCATATTTGGTAAT+CGG | - | tig0018449:17144-17163 | None:intergenic | 15.0% |
| !! | AGATTGTAAAATTTATTACA+AGG | - | tig0018449:17783-17802 | None:intergenic | 15.0% |
| !! | AATATAATAAATTGATCTTG+AGG | - | tig0018449:17957-17976 | None:intergenic | 15.0% |
| !! | AAAAGAAGAAGAAGAAAAAA+GGG | - | tig0018449:14960-14979 | None:intergenic | 20.0% |
| !! | AAAAAGAAGAAGAAGAAAAA+AGG | - | tig0018449:14961-14980 | None:intergenic | 20.0% |
| !! | AGAAAGAAAATTGAGAAAAA+GGG | - | tig0018449:15079-15098 | None:intergenic | 20.0% |
| !!! | TTCAGTTCTTTTTAATTGAA+AGG | - | tig0018449:15244-15263 | None:intergenic | 20.0% |
| !! | GTTCTCTAATCATAAATAAA+AGG | - | tig0018449:15359-15378 | None:intergenic | 20.0% |
| !! | TCTAGAAAGATTCAAAAAAT+AGG | + | tig0018449:16084-16103 | Msa1366370:intron | 20.0% |
| !!! | TCATTTTGACTGTAAAAAAA+AGG | - | tig0018449:16740-16759 | None:intergenic | 20.0% |
| !!! | TAAATTCATATTTGGTAATC+GGG | - | tig0018449:17143-17162 | None:intergenic | 20.0% |
| !!! | TTGTTTTAAAGCATAATGTT+TGG | + | tig0018449:17517-17536 | Msa1366370:CDS | 20.0% |
| !! | ATCGCAAACAATTATAATAT+TGG | + | tig0018449:17677-17696 | Msa1366370:intron | 20.0% |
| !! | TTTATTATATTTGCATCTGA+TGG | + | tig0018449:17966-17985 | Msa1366370:CDS | 20.0% |
| !! | TTATTATATTTGCATCTGAT+GGG | + | tig0018449:17967-17986 | Msa1366370:CDS | 20.0% |
| !!! | TTTTTAGACTGAAAACTTAA+GGG | + | tig0018449:18137-18156 | Msa1366370:intron | 20.0% |
| !!! | TTTTTTGACTGAAAACTTAA+GGG | + | tig0018449:18303-18322 | Msa1366370:intron | 20.0% |
| !!! | GATCACATATAATTTGTTAT+AGG | + | tig0018449:18447-18466 | Msa1366370:intron | 20.0% |
| !!! | ATGTTTTATGTTATTGTTTC+AGG | + | tig0018449:18516-18535 | Msa1366370:intron | 20.0% |
| !!! | TGTTTTATGTTATTGTTTCA+GGG | + | tig0018449:18517-18536 | Msa1366370:intron | 20.0% |
| !!! | TTAAATTGCATATCTTTTGA+AGG | + | tig0018449:18877-18896 | Msa1366370:three_prime_UTR | 20.0% |
| ! | TACTACTTTACTTGTGAAAT+GGG | - | tig0018449:14898-14917 | None:intergenic | 25.0% |
| ! | AAAGAAGAAGAAGAAAAAAG+GGG | - | tig0018449:14959-14978 | None:intergenic | 25.0% |
| ! | TAGATCTGGGTATTTATTTA+TGG | - | tig0018449:14987-15006 | None:intergenic | 25.0% |
| ! | TCTTCATCCAATAAATTCTT+TGG | + | tig0018449:15047-15066 | Msa1366370:five_prime_UTR | 25.0% |
| ! | GATCTTACCAAAGAATTTAT+TGG | - | tig0018449:15057-15076 | None:intergenic | 25.0% |
| ! | GAGAAAGAAAATTGAGAAAA+AGG | - | tig0018449:15080-15099 | None:intergenic | 25.0% |
| ! | CAATGTAAAAATGTCAACAA+TGG | + | tig0018449:15164-15183 | Msa1366370:intron | 25.0% |
| !!! | TTTTTTCTCTGACCAATTTT+TGG | - | tig0018449:15210-15229 | None:intergenic | 25.0% |
| ! | TATTATGGTATAAAGACTCA+GGG | + | tig0018449:15747-15766 | Msa1366370:CDS | 25.0% |
| ! | TACTCTTAAGATGTTGAAAT+AGG | - | tig0018449:15949-15968 | None:intergenic | 25.0% |
| !!! | TTTTCTTGGTTCTAAAAGAT+GGG | - | tig0018449:16057-16076 | None:intergenic | 25.0% |
| !!! | ATTTTCTTGGTTCTAAAAGA+TGG | - | tig0018449:16058-16077 | None:intergenic | 25.0% |
| !! | TTCTAGATAAGTGATTTTCT+TGG | - | tig0018449:16071-16090 | None:intergenic | 25.0% |
| ! | ATGAGACAGAAATATTATCT+CGG | - | tig0018449:16145-16164 | None:intergenic | 25.0% |
| !! | ATTCTTTTGTTGGTATATAC+TGG | - | tig0018449:16174-16193 | None:intergenic | 25.0% |
| !! | TAAGAGAATGATTCTTTTGT+TGG | - | tig0018449:16184-16203 | None:intergenic | 25.0% |
| !! | TTTTTGTGGCATTAATTCAA+TGG | - | tig0018449:16300-16319 | None:intergenic | 25.0% |
| !!! | TGTATATCTGCTATTTTTTG+TGG | - | tig0018449:16314-16333 | None:intergenic | 25.0% |
| !!! | GATTACAAAGTACTTTTCTT+GGG | - | tig0018449:16405-16424 | None:intergenic | 25.0% |
| !!! | ACCAAGATTTGCTATATAAA+GGG | - | tig0018449:17358-17377 | None:intergenic | 25.0% |
| ! | CAACAATATTTGAATCATCA+GGG | - | tig0018449:17500-17519 | None:intergenic | 25.0% |
| ! | ACAACAATATTTGAATCATC+AGG | - | tig0018449:17501-17520 | None:intergenic | 25.0% |
| !! | CTTTTTAGACTGAAAACTTA+AGG | + | tig0018449:18136-18155 | Msa1366370:intron | 25.0% |
| !! | AACGTTTTTATTGCAAGTAT+CGG | + | tig0018449:18173-18192 | Msa1366370:intron | 25.0% |
| ! | TGAGTAATCTTGACTAATAA+TGG | - | tig0018449:18236-18255 | None:intergenic | 25.0% |
| !!! | CTTTTTTGACTGAAAACTTA+AGG | + | tig0018449:18302-18321 | Msa1366370:intron | 25.0% |
| ! | AAAATTTGTGCGGATAATTT+AGG | + | tig0018449:18399-18418 | Msa1366370:intron | 25.0% |
| ! | TATGTGATCTCTATAAATCA+TGG | - | tig0018449:18436-18455 | None:intergenic | 25.0% |
| ! | GATTTAAATAAAATTGACCG+TGG | + | tig0018449:18607-18626 | Msa1366370:CDS | 25.0% |
| ! | TTATCTGTTGTAGTAGTAAA+AGG | - | tig0018449:18775-18794 | None:intergenic | 25.0% |
| !!! | ATAAACAGGATTTTTGTTTG+TGG | + | tig0018449:18965-18984 | Msa1366370:three_prime_UTR | 25.0% |
| ! | GATAGTGGTTCAATAAACAT+TGG | + | tig0018449:14752-14771 | Msa1366370:five_prime_UTR | 30.0% |
| TTTACTTGTGAAATGGGAAT+GGG | - | tig0018449:14892-14911 | None:intergenic | 30.0% | |
| CTACTACTTTACTTGTGAAA+TGG | - | tig0018449:14899-14918 | None:intergenic | 30.0% | |
| AAGAAGAAGAAGAAAAAAGG+GGG | - | tig0018449:14958-14977 | None:intergenic | 30.0% | |
| ATATTGAGCTGACCAAAAAT+TGG | + | tig0018449:15195-15214 | Msa1366370:intron | 30.0% | |
| AATTGGTCAGAGAAAAAAGT+TGG | + | tig0018449:15212-15231 | Msa1366370:intron | 30.0% | |
| !! | AGAACCCAATTTCTGTTTTT+GGG | + | tig0018449:15374-15393 | Msa1366370:intron | 30.0% |
| TTAGATGTTGAAATCCTTGA+TGG | + | tig0018449:15605-15624 | Msa1366370:five_prime_UTR | 30.0% | |
| !! | GTAAACAAGATGGACTATTA+TGG | + | tig0018449:15732-15751 | Msa1366370:CDS | 30.0% |
| CTATTATGGTATAAAGACTC+AGG | + | tig0018449:15746-15765 | Msa1366370:CDS | 30.0% | |
| TCTCTTATCAGATAAACTGT+TGG | + | tig0018449:16197-16216 | Msa1366370:intron | 30.0% | |
| ! | CTGTTTAATTGCATGCATTT+TGG | + | tig0018449:16363-16382 | Msa1366370:intron | 30.0% |
| !! | GGATTACAAAGTACTTTTCT+TGG | - | tig0018449:16406-16425 | None:intergenic | 30.0% |
| TGACCAAACTTTACTTATCT+CGG | - | tig0018449:16438-16457 | None:intergenic | 30.0% | |
| AGTAAAGTTTGGTCAAAGAT+TGG | + | tig0018449:16443-16462 | Msa1366370:intron | 30.0% | |
| ! | AGAACAAAGATGAGATTTTG+TGG | - | tig0018449:16706-16725 | None:intergenic | 30.0% |
| ACAGTCAAAATGAAGAAGAA+AGG | + | tig0018449:16747-16766 | Msa1366370:intron | 30.0% | |
| CAGTCAAAATGAAGAAGAAA+GGG | + | tig0018449:16748-16767 | Msa1366370:intron | 30.0% | |
| AAACAAATGATTGAGCTAAG+TGG | - | tig0018449:17055-17074 | None:intergenic | 30.0% | |
| CTTTCTCTACTTCAAATTTC+AGG | + | tig0018449:17171-17190 | Msa1366370:intron | 30.0% | |
| !! | CTTGTTGGTGTTATTTGTAA+TGG | + | tig0018449:17330-17349 | Msa1366370:CDS | 30.0% |
| ACCCTTTATATAGCAAATCT+TGG | + | tig0018449:17354-17373 | Msa1366370:CDS | 30.0% | |
| !! | CACCAAGATTTGCTATATAA+AGG | - | tig0018449:17359-17378 | None:intergenic | 30.0% |
| ATCAATAGAGTCTATAAGAC+AGG | + | tig0018449:17458-17477 | Msa1366370:CDS | 30.0% | |
| GTTCTTCATTTCATGAAACT+TGG | + | tig0018449:17749-17768 | Msa1366370:intron | 30.0% | |
| ATTTCATGAAACTTGGAAGT+TGG | + | tig0018449:17756-17775 | Msa1366370:intron | 30.0% | |
| TTTCATGAAACTTGGAAGTT+GGG | + | tig0018449:17757-17776 | Msa1366370:intron | 30.0% | |
| TAATGGTTCTCTATTGAACT+CGG | - | tig0018449:17853-17872 | None:intergenic | 30.0% | |
| ! | ATCGTTTTCATTGCAAGTAT+CGG | + | tig0018449:18351-18370 | Msa1366370:intron | 30.0% |
| GTTTGTGTACAAAATTTGTG+CGG | + | tig0018449:18389-18408 | Msa1366370:intron | 30.0% | |
| GATAAGAGTTTAGTGCAAAA+TGG | + | tig0018449:18488-18507 | Msa1366370:intron | 30.0% | |
| CAATTACAGTGATATCATCA+TGG | - | tig0018449:18648-18667 | None:intergenic | 30.0% | |
| ACTACTACAACAGATAATGA+TGG | + | tig0018449:18778-18797 | Msa1366370:CDS | 30.0% | |
| TAATTGGGATCTATACTAGT+AGG | + | tig0018449:18830-18849 | Msa1366370:three_prime_UTR | 30.0% | |
| TTCAGACAGATTGTTAAAGA+TGG | - | tig0018449:18917-18936 | None:intergenic | 30.0% | |
| TTAATGTCCACTTCATAAAC+AGG | + | tig0018449:18951-18970 | Msa1366370:three_prime_UTR | 30.0% | |
| CAAAAATCCTGTTTATGAAG+TGG | - | tig0018449:18961-18980 | None:intergenic | 30.0% | |
| CTTTACTTGTGAAATGGGAA+TGG | - | tig0018449:14893-14912 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAAAAAGGG+GGG | - | tig0018449:14957-14976 | None:intergenic | 35.0% | |
| CGTGTGAAATCATTAGATCT+GGG | - | tig0018449:15000-15019 | None:intergenic | 35.0% | |
| ! | ATACTTCTGTGACTTGTGTT+TGG | + | tig0018449:15136-15155 | Msa1366370:intron | 35.0% |
| ! | GAGAACCCAATTTCTGTTTT+TGG | + | tig0018449:15373-15392 | Msa1366370:intron | 35.0% |
| GACACCCAAAAACAGAAATT+GGG | - | tig0018449:15381-15400 | None:intergenic | 35.0% | |
| TGACACCCAAAAACAGAAAT+TGG | - | tig0018449:15382-15401 | None:intergenic | 35.0% | |
| ! | TCATCATCATTGTTGTTGTG+AGG | + | tig0018449:15526-15545 | Msa1366370:five_prime_UTR | 35.0% |
| ! | TGAAATCCTTGATGGTTGTT+TGG | + | tig0018449:15613-15632 | Msa1366370:five_prime_UTR | 35.0% |
| ATTTCACCAAACAACCATCA+AGG | - | tig0018449:15622-15641 | None:intergenic | 35.0% | |
| GGTGAAATGAGGTATGTTAT+CGG | + | tig0018449:15634-15653 | Msa1366370:exon | 35.0% | |
| ! | GGAGTTAGTGAACTTTTTGA+AGG | + | tig0018449:15655-15674 | Msa1366370:CDS | 35.0% |
| !! | CATATGTGGTGATTTTTCGA+TGG | + | tig0018449:15775-15794 | Msa1366370:CDS | 35.0% |
| TCAAACTACCAGATTCAATC+TGG | - | tig0018449:15838-15857 | None:intergenic | 35.0% | |
| ! | AGTTTGAGTTTGAATGAGTC+TGG | + | tig0018449:15851-15870 | Msa1366370:CDS | 35.0% |
| ! | ATAGAGTCTACTTGTTGCTT+TGG | + | tig0018449:16023-16042 | Msa1366370:intron | 35.0% |
| TACACGTACTAAGAAAACAG+TGG | + | tig0018449:16330-16349 | Msa1366370:intron | 35.0% | |
| GTACTTTGTAATCCAGAGTT+TGG | + | tig0018449:16412-16431 | Msa1366370:intron | 35.0% | |
| GAAAACACAAGTTCAAATCC+TGG | - | tig0018449:16474-16493 | None:intergenic | 35.0% | |
| ACAGAGATGTCGAATAATTC+AGG | - | tig0018449:16496-16515 | None:intergenic | 35.0% | |
| GATTAGAGATCTAGAGATCT+AGG | + | tig0018449:16786-16805 | Msa1366370:intron | 35.0% | |
| ! | GGAAGATTAGTTAAAGCAAC+TGG | + | tig0018449:17396-17415 | Msa1366370:CDS | 35.0% |
| ATTAGTTAAAGCAACTGGTG+AGG | + | tig0018449:17401-17420 | Msa1366370:CDS | 35.0% | |
| CTATCAGAGACTATCTGTTA+TGG | - | tig0018449:17634-17653 | None:intergenic | 35.0% | |
| AGAAAAGCCTTAAATTCCCT+TGG | + | tig0018449:17712-17731 | Msa1366370:intron | 35.0% | |
| CACAAATCCAAGGGAATTTA+AGG | - | tig0018449:17722-17741 | None:intergenic | 35.0% | |
| CAATGCATCTAGAAATCTGA+GGG | - | tig0018449:17809-17828 | None:intergenic | 35.0% | |
| AGTCGAAACTTGGCATATAA+TGG | - | tig0018449:17870-17889 | None:intergenic | 35.0% | |
| ! | AACTGATGCACTAGTATTGA+TGG | - | tig0018449:17930-17949 | None:intergenic | 35.0% |
| ! | TGAAAACTTAAGGGTATGTG+TGG | + | tig0018449:18146-18165 | Msa1366370:intron | 35.0% |
| TGAAAACTTAAGGGTCTGTA+TGG | + | tig0018449:18312-18331 | Msa1366370:intron | 35.0% | |
| ATCTCTATAAATCATGGCAC+AGG | - | tig0018449:18430-18449 | None:intergenic | 35.0% | |
| TATTGTTTCAGGGAATTGCA+AGG | + | tig0018449:18527-18546 | Msa1366370:intron | 35.0% | |
| ATAAAATTGACCGTGGAGTT+CGG | + | tig0018449:18614-18633 | Msa1366370:CDS | 35.0% | |
| TCTCTCTCTCTATCTGATAG+TGG | + | tig0018449:14737-14756 | Msa1366370:five_prime_UTR | 40.0% | |
| GGAGTAACATAGCATAGCAT+TGG | + | tig0018449:14773-14792 | Msa1366370:five_prime_UTR | 40.0% | |
| ! | CATAGCATAGCATTGGAATG+TGG | + | tig0018449:14780-14799 | Msa1366370:five_prime_UTR | 40.0% |
| CAAGGTCCATAAAAAGAGGT+TGG | - | tig0018449:14842-14861 | None:intergenic | 40.0% | |
| CAGACAAGGTCCATAAAAAG+AGG | - | tig0018449:14846-14865 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAAAAAGGGG+GGG | - | tig0018449:14956-14975 | None:intergenic | 40.0% | |
| GCGTGTGAAATCATTAGATC+TGG | - | tig0018449:15001-15020 | None:intergenic | 40.0% | |
| TCAACTTTAGCTGCTGTAGA+TGG | + | tig0018449:15278-15297 | Msa1366370:intron | 40.0% | |
| GTCCATGTTGTTGTAGTTTG+TGG | + | tig0018449:15490-15509 | Msa1366370:intron | 40.0% | |
| CACCACAAACTACAACAACA+TGG | - | tig0018449:15495-15514 | None:intergenic | 40.0% | |
| ! | CATGTTGTTGTAGTTTGTGG+TGG | + | tig0018449:15493-15512 | Msa1366370:intron | 40.0% |
| ! | ATTGTTGTTGTGAGGATTGC+AGG | + | tig0018449:15534-15553 | Msa1366370:five_prime_UTR | 40.0% |
| CTATAGTGAGTGAAAGCTGT+AGG | + | tig0018449:15582-15601 | Msa1366370:five_prime_UTR | 40.0% | |
| ! | GATGGTTGTTTGGTGAAATG+AGG | + | tig0018449:15623-15642 | Msa1366370:five_prime_UTR | 40.0% |
| !! | ACTTTTTGAAGGCCTGCTTT+CGG | + | tig0018449:15666-15685 | Msa1366370:CDS | 40.0% |
| ! | AGTTCAAGCCAATAACTTGC+TGG | + | tig0018449:15802-15821 | Msa1366370:CDS | 40.0% |
| CTGATCTTCCAGCAAGTTAT+TGG | - | tig0018449:15813-15832 | None:intergenic | 40.0% | |
| ATGGTATGCTCGTAGTCAAT+TGG | - | tig0018449:16281-16300 | None:intergenic | 40.0% | |
| ! | TACTTTTCTTGGGAACCTGA+GGG | - | tig0018449:16395-16414 | None:intergenic | 40.0% |
| TGGCCGAGATAAGTAAAGTT+TGG | + | tig0018449:16432-16451 | Msa1366370:intron | 40.0% | |
| GACATCTCTGTTGTCAATAG+CGG | + | tig0018449:16505-16524 | Msa1366370:intron | 40.0% | |
| GTCGAACATAGTTGTCAAAG+CGG | - | tig0018449:17013-17032 | None:intergenic | 40.0% | |
| GATTGAGCTAAGTGGTTGAT+GGG | - | tig0018449:17047-17066 | None:intergenic | 40.0% | |
| TGATTGAGCTAAGTGGTTGA+TGG | - | tig0018449:17048-17067 | None:intergenic | 40.0% | |
| ! | GTCAGTTGATGTAATTCGCA+AGG | + | tig0018449:17218-17237 | Msa1366370:CDS | 40.0% |
| ! | TAGCAAATCTTGGTGATTCC+AGG | + | tig0018449:17364-17383 | Msa1366370:CDS | 40.0% |
| ! | AGCAAATCTTGGTGATTCCA+GGG | + | tig0018449:17365-17384 | Msa1366370:CDS | 40.0% |
| !! | GTGCTCTGTTGATAATTGCA+TGG | - | tig0018449:17433-17452 | None:intergenic | 40.0% |
| CATAATGTTTGGCGTGTGAA+GGG | + | tig0018449:17528-17547 | Msa1366370:CDS | 40.0% | |
| CCAATGCATCTAGAAATCTG+AGG | - | tig0018449:17810-17829 | None:intergenic | 40.0% | |
| ! | CCTCAGATTTCTAGATGCAT+TGG | + | tig0018449:17807-17826 | Msa1366370:intron | 40.0% |
| ! | TTCCCTGGTATTTCTGTTAG+AGG | + | tig0018449:18715-18734 | Msa1366370:CDS | 40.0% |
| CTCCTCTAACAGAAATACCA+GGG | - | tig0018449:18720-18739 | None:intergenic | 40.0% | |
| CAATCTGTCTGAAAGAACTG+TGG | + | tig0018449:18924-18943 | Msa1366370:three_prime_UTR | 40.0% | |
| ! | CATAGCATTGGAATGTGGTG+TGG | + | tig0018449:14785-14804 | Msa1366370:five_prime_UTR | 45.0% |
| CTAAGCAGAGGTTCACCAAT+GGG | - | tig0018449:14813-14832 | None:intergenic | 45.0% | |
| ! | CTGGCTCCAACCTCTTTTTA+TGG | + | tig0018449:14833-14852 | Msa1366370:five_prime_UTR | 45.0% |
| CTTTAGCTGCTGTAGATGGA+TGG | + | tig0018449:15282-15301 | Msa1366370:intron | 45.0% | |
| GATGCTGGAGGTAAACAAGA+TGG | + | tig0018449:15722-15741 | Msa1366370:CDS | 45.0% | |
| GATCAGAGCCAGATTGAATC+TGG | + | tig0018449:15827-15846 | Msa1366370:CDS | 45.0% | |
| TTGAATGAGTCTGGCCCTTA+TGG | + | tig0018449:15860-15879 | Msa1366370:CDS | 45.0% | |
| CGCCAACAAAGGTTCCATAA+GGG | - | tig0018449:15877-15896 | None:intergenic | 45.0% | |
| ACGCCAACAAAGGTTCCATA+AGG | - | tig0018449:15878-15897 | None:intergenic | 45.0% | |
| ACCTTTGTTGGCGTCTATGA+TGG | + | tig0018449:15884-15903 | Msa1366370:CDS | 45.0% | |
| TCCATCATAGACGCCAACAA+AGG | - | tig0018449:15888-15907 | None:intergenic | 45.0% | |
| ! | GAGTTCGAGTTTCAGCTCAA+TGG | + | tig0018449:16243-16262 | Msa1366370:intron | 45.0% |
| TCGAGTTTCAGCTCAATGGT+TGG | + | tig0018449:16247-16266 | Msa1366370:intron | 45.0% | |
| !!! | GCATTTTGGTCTTAACCCTC+AGG | + | tig0018449:16377-16396 | Msa1366370:intron | 45.0% |
| ! | GTACTTTTCTTGGGAACCTG+AGG | - | tig0018449:16396-16415 | None:intergenic | 45.0% |
| TACTTATCTCGGCCAAACTC+TGG | - | tig0018449:16427-16446 | None:intergenic | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | + | tig0018449:16515-16534 | Msa1366370:intron | 45.0% | |
| TAGTTGTCAAAGCGGAAACG+CGG | - | tig0018449:17005-17024 | None:intergenic | 45.0% | |
| GCATTCCAAGCAACAGAAGA+GGG | + | tig0018449:17240-17259 | Msa1366370:CDS | 45.0% | |
| CATTCCAAGCAACAGAAGAG+GGG | + | tig0018449:17241-17260 | Msa1366370:CDS | 45.0% | |
| TAAACCCCTCTTCTGTTGCT+TGG | - | tig0018449:17248-17267 | None:intergenic | 45.0% | |
| AGAAGAGGGGTTTATGTCAC+TGG | + | tig0018449:17254-17273 | Msa1366370:CDS | 45.0% | |
| GCTGCAATTTGCGGTGAAAT+TGG | - | tig0018449:17294-17313 | None:intergenic | 45.0% | |
| TAATCTTCCCAAAACAGCCC+TGG | - | tig0018449:17385-17404 | None:intergenic | 45.0% | |
| GCATAATGTTTGGCGTGTGA+AGG | + | tig0018449:17527-17546 | Msa1366370:CDS | 45.0% | |
| ACACAAGCGCACAAATCCAA+GGG | - | tig0018449:17731-17750 | None:intergenic | 45.0% | |
| AACACAAGCGCACAAATCCA+AGG | - | tig0018449:17732-17751 | None:intergenic | 45.0% | |
| !! | CTCAGTATTGGCCTCTTGAA+CGG | - | tig0018449:17900-17919 | None:intergenic | 45.0% |
| !! | GATGGTTCTGAGCTCAGTAT+TGG | - | tig0018449:17912-17931 | None:intergenic | 45.0% |
| !! | TATTTGCATCTGATGGGCTC+TGG | + | tig0018449:17973-17992 | Msa1366370:CDS | 45.0% |
| !! | ATTTGCATCTGATGGGCTCT+GGG | + | tig0018449:17974-17993 | Msa1366370:CDS | 45.0% |
| AATGAGTATCTTACAGCGCG+AGG | - | tig0018449:18044-18063 | None:intergenic | 45.0% | |
| !! | TTGCAAGTATCGGTCATGCT+TGG | + | tig0018449:18183-18202 | Msa1366370:intron | 45.0% |
| !! | TGCAAGTATCGGTCATGCTT+GGG | + | tig0018449:18184-18203 | Msa1366370:intron | 45.0% |
| TGTTTCAGGGAATTGCAAGG+AGG | + | tig0018449:18530-18549 | Msa1366370:intron | 45.0% | |
| CCTCCTCTAACAGAAATACC+AGG | - | tig0018449:18721-18740 | None:intergenic | 45.0% | |
| ! | CCTGGTATTTCTGTTAGAGG+AGG | + | tig0018449:18718-18737 | Msa1366370:CDS | 45.0% |
| ! | GGTATTTCTGTTAGAGGAGG+TGG | + | tig0018449:18721-18740 | Msa1366370:CDS | 45.0% |
| TAGCATCCCTCACAACACAT+TGG | + | tig0018449:18747-18766 | Msa1366370:CDS | 45.0% | |
| ! | AAGGTGCCAATGTGTTGTGA+GGG | - | tig0018449:18756-18775 | None:intergenic | 45.0% |
| !! | AAAGGTGCCAATGTGTTGTG+AGG | - | tig0018449:18757-18776 | None:intergenic | 45.0% |
| !! | AATATATATAAATTCATATT+TGG | - | tig0018449:17151-17170 | None:intergenic | 5.0% |
| GCTAAGCAGAGGTTCACCAA+TGG | - | tig0018449:14814-14833 | None:intergenic | 50.0% | |
| TTGGTGAACCTCTGCTTAGC+TGG | + | tig0018449:14814-14833 | Msa1366370:five_prime_UTR | 50.0% | |
| AAGAAGGAGTGAGGCAGACA+AGG | - | tig0018449:14860-14879 | None:intergenic | 50.0% | |
| CTTGTGAAATGGGAATGGGC+AGG | - | tig0018449:14888-14907 | None:intergenic | 50.0% | |
| GGCCCTTATGGAACCTTTGT+TGG | + | tig0018449:15872-15891 | Msa1366370:CDS | 50.0% | |
| !! | GTTGGCGTCTATGATGGACA+TGG | + | tig0018449:15890-15909 | Msa1366370:CDS | 50.0% |
| TTGATAAACCGCGACGTCTC+AGG | - | tig0018449:15920-15939 | None:intergenic | 50.0% | |
| CTGTTGGAGCATAGATAGCG+AGG | + | tig0018449:16213-16232 | Msa1366370:intron | 50.0% | |
| !! | GGTCAAAGATTGGTCTAGCC+AGG | + | tig0018449:16453-16472 | Msa1366370:intron | 50.0% |
| GGTCAATGCGGGCAAAAAGT+GGG | + | tig0018449:16635-16654 | Msa1366370:intron | 50.0% | |
| GGCATTCCAAGCAACAGAAG+AGG | + | tig0018449:17239-17258 | Msa1366370:CDS | 50.0% | |
| TCACCGCAAATTGCAGCAGT+TGG | + | tig0018449:17297-17316 | Msa1366370:CDS | 50.0% | |
| CACCGCAAATTGCAGCAGTT+GGG | + | tig0018449:17298-17317 | Msa1366370:CDS | 50.0% | |
| GACCCAACTGCTGCAATTTG+CGG | - | tig0018449:17303-17322 | None:intergenic | 50.0% | |
| ! | GTTGGGTCTTGCTGTCTTGT+TGG | + | tig0018449:17315-17334 | Msa1366370:CDS | 50.0% |
| ! | TGGTGATTCCAGGGCTGTTT+TGG | + | tig0018449:17374-17393 | Msa1366370:CDS | 50.0% |
| !! | GGTGATTCCAGGGCTGTTTT+GGG | + | tig0018449:17375-17394 | Msa1366370:CDS | 50.0% |
| !! | AAGTATCGGTCATGCTTGGG+TGG | + | tig0018449:18187-18206 | Msa1366370:intron | 50.0% |
| TCAGGGAATTGCAAGGAGGA+TGG | + | tig0018449:18534-18553 | Msa1366370:intron | 50.0% | |
| GAATGTGGTGTGGAGCCCAT+TGG | + | tig0018449:14795-14814 | Msa1366370:five_prime_UTR | 55.0% | |
| CAGGCAAGGAAGAAGGAGTG+AGG | - | tig0018449:14869-14888 | None:intergenic | 55.0% | |
| GAATGGGCAGGCAAGGAAGA+AGG | - | tig0018449:14876-14895 | None:intergenic | 55.0% | |
| GAAATGGGAATGGGCAGGCA+AGG | - | tig0018449:14883-14902 | None:intergenic | 55.0% | |
| TTTGAAGGCCTGCTTTCGGC+CGG | + | tig0018449:15670-15689 | Msa1366370:CDS | 55.0% | |
| GACTCAGGGCAGCACATATG+TGG | + | tig0018449:15761-15780 | Msa1366370:CDS | 55.0% | |
| !! | GGCGTCTATGATGGACATGG+AGG | + | tig0018449:15893-15912 | Msa1366370:CDS | 55.0% |
| ! | CTTTTGCCTAACGCGCGACT+CGG | - | tig0018449:16592-16611 | None:intergenic | 55.0% |
| AGTCGCGCGTTAGGCAAAAG+CGG | + | tig0018449:16592-16611 | Msa1366370:intron | 55.0% | |
| TAGGCAAAAGCGGGTCAACG+CGG | + | tig0018449:16602-16621 | Msa1366370:intron | 55.0% | |
| GGGCAAAAAGCGGGTCAATG+CGG | + | tig0018449:16623-16642 | Msa1366370:intron | 55.0% | |
| GGCAAAAAGCGGGTCAATGC+GGG | + | tig0018449:16624-16643 | Msa1366370:intron | 55.0% | |
| GGGTCAATGCGGGCAAAAAG+TGG | + | tig0018449:16634-16653 | Msa1366370:intron | 55.0% | |
| GGGCAAAAAGTGGGTCAACG+CGG | + | tig0018449:16644-16663 | Msa1366370:intron | 55.0% | |
| GGCAAAAAGTGGGTCAACGC+GGG | + | tig0018449:16645-16664 | Msa1366370:intron | 55.0% | |
| ! | TACCGCGCCGCGTCAATTTT+TGG | + | tig0018449:16964-16983 | Msa1366370:intron | 55.0% |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | + | tig0018449:16965-16984 | Msa1366370:intron | 55.0% |
| GGCCACCCCAAAAATTGACG+CGG | - | tig0018449:16974-16993 | None:intergenic | 55.0% | |
| !! | TGTCACTGGTTTCGCAGCTG+TGG | + | tig0018449:17268-17287 | Msa1366370:CDS | 55.0% |
| CGGCTGAGGAAGTCGAAACT+TGG | - | tig0018449:17880-17899 | None:intergenic | 55.0% | |
| GACTTCCTCAGCCGTTCAAG+AGG | + | tig0018449:17886-17905 | Msa1366370:CDS | 55.0% | |
| ! | ATTGGCCTCTTGAACGGCTG+AGG | - | tig0018449:17894-17913 | None:intergenic | 55.0% |
| GGAAATGTCGCCGAACTCCA+CGG | - | tig0018449:18627-18646 | None:intergenic | 55.0% | |
| ! | GCAAGCACTGTGAAGTTCCC+TGG | + | tig0018449:18700-18719 | Msa1366370:CDS | 55.0% |
| GGTTGGAGCCAGCTAAGCAG+AGG | - | tig0018449:14825-14844 | None:intergenic | 60.0% | |
| TTGAAGGCCTGCTTTCGGCC+GGG | + | tig0018449:15671-15690 | Msa1366370:CDS | 60.0% | |
| CGCGCATATCCATCCGAACC+CGG | - | tig0018449:15692-15711 | None:intergenic | 60.0% | |
| CGCACAACGTCAGATGCTGG+AGG | + | tig0018449:15710-15729 | Msa1366370:CDS | 60.0% | |
| ATGGAGGTCCTGAGACGTCG+CGG | + | tig0018449:15909-15928 | Msa1366370:CDS | 60.0% | |
| GTCGCGCGTTAGGCAAAAGC+GGG | + | tig0018449:16593-16612 | Msa1366370:intron | 60.0% | |
| AGGCAAAAGCGGGTCAACGC+GGG | + | tig0018449:16603-16622 | Msa1366370:intron | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | + | tig0018449:16613-16632 | Msa1366370:intron | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | + | tig0018449:16614-16633 | Msa1366370:intron | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | + | tig0018449:16613-16632 | Msa1366370:intron | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | + | tig0018449:16614-16633 | Msa1366370:intron | 60.0% | |
| ! | GCGGGCGCTTTTACATGACG+CGG | - | tig0018449:16932-16951 | None:intergenic | 60.0% |
| AATTGACGCGGCGCGGTAAG+CGG | - | tig0018449:16962-16981 | None:intergenic | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | - | tig0018449:16969-16988 | None:intergenic | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | + | tig0018449:16966-16985 | Msa1366370:intron | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | + | tig0018449:16969-16988 | Msa1366370:intron | 60.0% |
| ATCCGAACCCGGCCGAAAGC+AGG | - | tig0018449:15681-15700 | None:intergenic | 65.0% | |
| TGCTTTCGGCCGGGTTCGGA+TGG | + | tig0018449:15680-15699 | Msa1366370:CDS | 65.0% | |
| GCGCGCACAACGTCAGATGC+TGG | + | tig0018449:15707-15726 | Msa1366370:CDS | 65.0% | |
| ATTGACGCGGCGCGGTAAGC+GGG | - | tig0018449:16961-16980 | None:intergenic | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | - | tig0018449:17000-17019 | None:intergenic | 65.0% | |
| GGCCTGCTTTCGGCCGGGTT+CGG | + | tig0018449:15676-15695 | Msa1366370:CDS | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | + | tig0018449:16526-16545 | Msa1366370:intron | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | - | tig0018449:16572-16591 | None:intergenic | 70.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | + | tig0018449:16583-16602 | Msa1366370:intron | 70.0% | |
| ! | AACGCGGCGCGATCGCGGCG+CGG | + | tig0018449:16531-16550 | Msa1366370:intron | 80.0% |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | - | tig0018449:16950-16969 | None:intergenic | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | - | tig0018449:16951-16970 | None:intergenic | 80.0% |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | - | tig0018449:16995-17014 | None:intergenic | 80.0% |
| ! | GGCGCGATCGCGGCGCGGAG+CGG | + | tig0018449:16536-16555 | Msa1366370:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018449 | gene | 14728 | 19009 | 14728 | ID=Msa1366370;Name=Msa1366370 |
| tig0018449 | mRNA | 14728 | 19009 | 14728 | ID=Msa1366370-mRNA-1;Parent=Msa1366370;Name=Msa1366370-mRNA-1;_AED=0.17;_eAED=0.17;_QI=482|1|1|1|0.75|0.6|5|202|397 |
| tig0018449 | exon | 14728 | 15068 | 14728 | ID=Msa1366370-mRNA-1:exon:15106;Parent=Msa1366370-mRNA-1 |
| tig0018449 | exon | 15506 | 15965 | 15506 | ID=Msa1366370-mRNA-1:exon:15107;Parent=Msa1366370-mRNA-1 |
| tig0018449 | exon | 17193 | 17560 | 17193 | ID=Msa1366370-mRNA-1:exon:15108;Parent=Msa1366370-mRNA-1 |
| tig0018449 | exon | 17813 | 18049 | 17813 | ID=Msa1366370-mRNA-1:exon:15109;Parent=Msa1366370-mRNA-1 |
| tig0018449 | exon | 18538 | 19009 | 18538 | ID=Msa1366370-mRNA-1:exon:15110;Parent=Msa1366370-mRNA-1 |
| tig0018449 | five_prime_UTR | 14728 | 15068 | 14728 | ID=Msa1366370-mRNA-1:five_prime_utr;Parent=Msa1366370-mRNA-1 |
| tig0018449 | five_prime_UTR | 15506 | 15646 | 15506 | ID=Msa1366370-mRNA-1:five_prime_utr;Parent=Msa1366370-mRNA-1 |
| tig0018449 | CDS | 15647 | 15965 | 15647 | ID=Msa1366370-mRNA-1:cds;Parent=Msa1366370-mRNA-1 |
| tig0018449 | CDS | 17193 | 17560 | 17193 | ID=Msa1366370-mRNA-1:cds;Parent=Msa1366370-mRNA-1 |
| tig0018449 | CDS | 17813 | 18049 | 17813 | ID=Msa1366370-mRNA-1:cds;Parent=Msa1366370-mRNA-1 |
| tig0018449 | CDS | 18538 | 18807 | 18538 | ID=Msa1366370-mRNA-1:cds;Parent=Msa1366370-mRNA-1 |
| tig0018449 | three_prime_UTR | 18808 | 19009 | 18808 | ID=Msa1366370-mRNA-1:three_prime_utr;Parent=Msa1366370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
