Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0044510 | XP_013470341.1 | 98.992 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0044510 | sp|Q5PNS9|P2C64_ARATH | 73.724 | 392 | 103 | 0 | 1 | 392 | 1 | 392 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044510 | Msa0138090 | 0.984486 | 1.061826e-160 | -8.615850e-47 |
| Msa0044510 | Msa0182520 | 0.820177 | 7.871118e-53 | -8.615850e-47 |
| Msa0044510 | Msa0183330 | 0.936332 | 2.057079e-97 | -8.615850e-47 |
| Msa0044510 | Msa0270590 | 0.807120 | 5.901702e-50 | -8.615850e-47 |
| Msa0044510 | Msa0429980 | 0.841219 | 5.425992e-58 | -8.615850e-47 |
| Msa0044510 | Msa0500640 | 0.814104 | 1.825773e-51 | -8.615850e-47 |
| Msa0044510 | Msa0500660 | 0.840268 | 9.631249e-58 | -8.615850e-47 |
| Msa0044510 | Msa0527130 | 0.838930 | 2.146470e-57 | -8.615850e-47 |
| Msa0044510 | Msa1366370 | 0.997178 | 3.989556e-238 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0044510 | MtrunA17_Chr1g0211251 | 98.992 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 0.0 | 818 |
| Msa0044510 | MtrunA17_Chr7g0250061 | 81.654 | 387 | 71 | 0 | 6 | 392 | 1 | 387 | 0.0 | 644 |
| Msa0044510 | MtrunA17_Chr8g0371321 | 75.258 | 388 | 94 | 1 | 1 | 388 | 1 | 386 | 0.0 | 609 |
| Msa0044510 | MtrunA17_Chr1g0213351 | 68.033 | 366 | 109 | 2 | 12 | 377 | 13 | 370 | 0.0 | 522 |
| Msa0044510 | MtrunA17_Chr7g0263281 | 63.934 | 366 | 128 | 2 | 11 | 376 | 4 | 365 | 1.66e-167 | 473 |
| Msa0044510 | MtrunA17_Chr2g0294291 | 58.621 | 377 | 144 | 4 | 1 | 374 | 1 | 368 | 2.36e-162 | 460 |
| Msa0044510 | MtrunA17_Chr1g0181901 | 56.110 | 401 | 144 | 4 | 8 | 377 | 1 | 400 | 2.61e-154 | 441 |
| Msa0044510 | MtrunA17_Chr1g0175381 | 53.927 | 382 | 157 | 5 | 1 | 375 | 1 | 370 | 1.46e-150 | 431 |
| Msa0044510 | MtrunA17_Chr1g0207571 | 53.743 | 374 | 158 | 3 | 9 | 380 | 2 | 362 | 5.32e-143 | 411 |
| Msa0044510 | MtrunA17_Chr3g0089711 | 45.109 | 368 | 181 | 6 | 1 | 362 | 1 | 353 | 3.50e-103 | 310 |
| Msa0044510 | MtrunA17_Chr3g0089721 | 44.837 | 368 | 182 | 6 | 1 | 362 | 1 | 353 | 1.30e-102 | 308 |
| Msa0044510 | MtrunA17_Chr7g0256751 | 49.221 | 321 | 146 | 6 | 43 | 356 | 38 | 348 | 1.98e-97 | 297 |
| Msa0044510 | MtrunA17_Chr7g0256771 | 47.601 | 271 | 131 | 4 | 39 | 307 | 35 | 296 | 1.06e-80 | 250 |
| Msa0044510 | MtrunA17_Chr3g0089691 | 48.387 | 248 | 121 | 3 | 120 | 362 | 22 | 267 | 2.97e-78 | 243 |
| Msa0044510 | MtrunA17_Chr4g0063111 | 35.843 | 332 | 190 | 7 | 31 | 356 | 33 | 347 | 4.44e-60 | 202 |
| Msa0044510 | MtrunA17_Chr4g0063051 | 34.104 | 346 | 181 | 12 | 35 | 375 | 22 | 325 | 2.33e-50 | 172 |
| Msa0044510 | MtrunA17_Chr7g0238501 | 30.872 | 298 | 177 | 7 | 81 | 359 | 263 | 550 | 4.14e-42 | 155 |
| Msa0044510 | MtrunA17_Chr2g0295991 | 32.967 | 273 | 171 | 4 | 101 | 366 | 220 | 487 | 1.56e-40 | 150 |
| Msa0044510 | MtrunA17_Chr4g0039061 | 31.973 | 294 | 178 | 7 | 80 | 359 | 201 | 486 | 1.40e-39 | 147 |
| Msa0044510 | MtrunA17_Chr7g0256761 | 41.294 | 201 | 95 | 5 | 167 | 362 | 5 | 187 | 3.08e-39 | 139 |
| Msa0044510 | MtrunA17_Chr4g0067301 | 33.977 | 259 | 156 | 5 | 117 | 365 | 245 | 498 | 1.58e-38 | 144 |
| Msa0044510 | MtrunA17_Chr4g0031521 | 28.929 | 280 | 157 | 5 | 117 | 359 | 425 | 699 | 3.89e-32 | 128 |
| Msa0044510 | MtrunA17_Chr4g0054811 | 28.094 | 299 | 156 | 5 | 115 | 359 | 478 | 771 | 8.04e-32 | 127 |
| Msa0044510 | MtrunA17_Chr1g0193691 | 38.202 | 178 | 101 | 3 | 186 | 359 | 715 | 887 | 2.86e-29 | 120 |
| Msa0044510 | MtrunA17_Chr4g0062951 | 35.638 | 188 | 103 | 7 | 115 | 289 | 1 | 183 | 2.83e-27 | 107 |
| Msa0044510 | MtrunA17_Chr5g0430481 | 30.667 | 225 | 114 | 6 | 80 | 303 | 153 | 336 | 3.50e-25 | 105 |
| Msa0044510 | MtrunA17_Chr1g0212961 | 30.579 | 242 | 118 | 8 | 81 | 318 | 126 | 321 | 2.73e-24 | 102 |
| Msa0044510 | MtrunA17_Chr3g0105371 | 28.159 | 277 | 143 | 9 | 80 | 355 | 117 | 338 | 3.42e-24 | 102 |
| Msa0044510 | MtrunA17_Chr3g0105351 | 26.619 | 278 | 146 | 7 | 80 | 355 | 93 | 314 | 1.10e-23 | 100 |
| Msa0044510 | MtrunA17_Chr2g0317021 | 27.640 | 322 | 154 | 11 | 42 | 355 | 82 | 332 | 5.53e-23 | 98.6 |
| Msa0044510 | MtrunA17_Chr4g0050381 | 29.126 | 309 | 150 | 13 | 48 | 353 | 32 | 274 | 1.35e-20 | 90.9 |
| Msa0044510 | MtrunA17_Chr4g0051661 | 28.689 | 244 | 123 | 10 | 81 | 318 | 183 | 381 | 7.21e-20 | 90.5 |
| Msa0044510 | MtrunA17_Chr4g0070871 | 27.667 | 300 | 169 | 10 | 15 | 303 | 185 | 447 | 9.72e-20 | 90.9 |
| Msa0044510 | MtrunA17_Chr3g0115851 | 28.013 | 307 | 156 | 10 | 48 | 353 | 37 | 279 | 1.03e-19 | 88.6 |
| Msa0044510 | MtrunA17_Chr8g0360351 | 26.498 | 317 | 160 | 10 | 42 | 353 | 31 | 279 | 1.48e-19 | 88.2 |
| Msa0044510 | MtrunA17_Chr3g0126511 | 24.691 | 243 | 140 | 6 | 59 | 301 | 107 | 306 | 2.93e-19 | 88.6 |
| Msa0044510 | MtrunA17_Chr1g0150451 | 28.099 | 242 | 128 | 8 | 83 | 320 | 110 | 309 | 3.56e-19 | 87.8 |
| Msa0044510 | MtrunA17_Chr3g0136711 | 26.102 | 295 | 151 | 10 | 83 | 372 | 67 | 299 | 5.62e-19 | 86.7 |
| Msa0044510 | MtrunA17_Chr2g0279151 | 28.674 | 279 | 128 | 12 | 81 | 353 | 65 | 278 | 6.95e-19 | 86.3 |
| Msa0044510 | MtrunA17_Chr7g0223641 | 30.973 | 226 | 111 | 8 | 145 | 358 | 7 | 199 | 1.58e-18 | 83.6 |
| Msa0044510 | MtrunA17_Chr5g0426141 | 28.339 | 307 | 155 | 11 | 48 | 353 | 37 | 279 | 4.46e-18 | 84.0 |
| Msa0044510 | MtrunA17_Chr3g0135961 | 27.152 | 302 | 145 | 12 | 81 | 355 | 286 | 539 | 4.73e-18 | 85.9 |
| Msa0044510 | MtrunA17_Chr3g0138281 | 27.915 | 283 | 143 | 12 | 76 | 353 | 117 | 343 | 6.41e-18 | 84.7 |
| Msa0044510 | MtrunA17_Chr2g0293811 | 26.621 | 293 | 138 | 11 | 80 | 355 | 99 | 331 | 1.38e-17 | 83.6 |
| Msa0044510 | MtrunA17_Chr5g0407161 | 26.502 | 283 | 144 | 10 | 77 | 353 | 119 | 343 | 3.72e-17 | 82.4 |
| Msa0044510 | MtrunA17_Chr1g0158781 | 28.622 | 283 | 164 | 8 | 30 | 312 | 96 | 340 | 5.02e-17 | 82.0 |
| Msa0044510 | MtrunA17_Chr7g0272061 | 32.227 | 211 | 95 | 9 | 161 | 361 | 195 | 367 | 8.24e-17 | 81.3 |
| Msa0044510 | MtrunA17_Chr2g0299981 | 26.800 | 250 | 122 | 7 | 81 | 303 | 267 | 482 | 2.52e-16 | 80.9 |
| Msa0044510 | MtrunA17_Chr3g0112291 | 26.689 | 296 | 153 | 10 | 81 | 355 | 123 | 375 | 3.01e-16 | 79.7 |
| Msa0044510 | MtrunA17_Chr5g0435721 | 26.695 | 236 | 122 | 5 | 81 | 303 | 223 | 420 | 1.76e-15 | 77.8 |
| Msa0044510 | MtrunA17_Chr1g0194191 | 26.400 | 250 | 144 | 9 | 80 | 320 | 117 | 335 | 3.59e-15 | 76.6 |
| Msa0044510 | MtrunA17_Chr1g0150071 | 25.461 | 271 | 122 | 11 | 80 | 303 | 51 | 288 | 3.63e-15 | 76.3 |
| Msa0044510 | MtrunA17_Chr4g0065141 | 25.874 | 286 | 148 | 12 | 80 | 357 | 123 | 352 | 5.81e-15 | 75.9 |
| Msa0044510 | MtrunA17_Chr3g0144111 | 24.503 | 302 | 139 | 9 | 79 | 374 | 25 | 243 | 5.29e-14 | 71.6 |
| Msa0044510 | MtrunA17_Chr1g0171571 | 25.606 | 289 | 155 | 11 | 72 | 355 | 411 | 644 | 7.50e-14 | 73.2 |
| Msa0044510 | MtrunA17_Chr3g0136811 | 25.279 | 269 | 123 | 10 | 80 | 302 | 51 | 287 | 9.35e-14 | 72.0 |
| Msa0044510 | MtrunA17_Chr4g0001761 | 24.058 | 345 | 177 | 10 | 72 | 374 | 46 | 347 | 1.16e-13 | 71.6 |
| Msa0044510 | MtrunA17_Chr1g0150781 | 26.087 | 299 | 152 | 12 | 81 | 355 | 290 | 543 | 1.38e-13 | 72.4 |
| Msa0044510 | MtrunA17_Chr6g0483411 | 25.746 | 268 | 140 | 10 | 84 | 332 | 82 | 309 | 1.60e-13 | 70.9 |
| Msa0044510 | MtrunA17_Chr5g0396731 | 26.280 | 293 | 172 | 10 | 74 | 359 | 99 | 354 | 6.26e-13 | 69.3 |
| Msa0044510 | MtrunA17_Chr8g0342431 | 29.379 | 177 | 105 | 5 | 162 | 336 | 210 | 368 | 1.30e-12 | 68.9 |
| Msa0044510 | MtrunA17_Chr7g0221691 | 28.643 | 199 | 108 | 8 | 162 | 358 | 245 | 411 | 2.66e-12 | 68.2 |
| Msa0044510 | MtrunA17_Chr1g0192421 | 25.987 | 304 | 158 | 14 | 81 | 357 | 89 | 352 | 3.63e-12 | 67.0 |
| Msa0044510 | MtrunA17_Chr3g0127091 | 25.101 | 247 | 149 | 6 | 80 | 307 | 88 | 317 | 4.22e-12 | 67.0 |
| Msa0044510 | MtrunA17_Chr2g0295401 | 26.797 | 306 | 153 | 15 | 81 | 357 | 92 | 355 | 6.90e-12 | 66.2 |
| Msa0044510 | MtrunA17_Chr4g0004971 | 27.208 | 283 | 149 | 14 | 81 | 332 | 78 | 334 | 5.22e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0044510 | AT4G38520.2 | 73.724 | 392 | 103 | 0 | 1 | 392 | 1 | 392 | 0.0 | 623 |
| Msa0044510 | AT4G38520.1 | 73.724 | 392 | 103 | 0 | 1 | 392 | 1 | 392 | 0.0 | 623 |
| Msa0044510 | AT5G66080.1 | 74.346 | 382 | 97 | 1 | 1 | 381 | 1 | 382 | 0.0 | 611 |
| Msa0044510 | AT3G51370.1 | 73.491 | 381 | 96 | 2 | 1 | 381 | 1 | 376 | 0.0 | 600 |
| Msa0044510 | AT3G51370.3 | 73.491 | 381 | 96 | 2 | 1 | 381 | 1 | 376 | 0.0 | 600 |
| Msa0044510 | AT3G12620.2 | 67.200 | 375 | 122 | 1 | 3 | 377 | 5 | 378 | 0.0 | 537 |
| Msa0044510 | AT3G12620.1 | 67.200 | 375 | 122 | 1 | 3 | 377 | 5 | 378 | 0.0 | 537 |
| Msa0044510 | AT3G55050.1 | 64.042 | 381 | 128 | 3 | 8 | 385 | 9 | 383 | 0.0 | 518 |
| Msa0044510 | AT3G55050.2 | 64.042 | 381 | 128 | 3 | 8 | 385 | 9 | 383 | 0.0 | 518 |
| Msa0044510 | AT5G66080.2 | 74.818 | 274 | 69 | 0 | 108 | 381 | 5 | 278 | 1.11e-162 | 458 |
| Msa0044510 | AT3G51370.2 | 70.748 | 294 | 82 | 2 | 88 | 381 | 2 | 291 | 1.96e-158 | 447 |
| Msa0044510 | AT5G02760.1 | 60.976 | 369 | 138 | 4 | 8 | 376 | 1 | 363 | 1.10e-156 | 446 |
| Msa0044510 | AT3G17090.1 | 55.703 | 377 | 142 | 5 | 1 | 363 | 1 | 366 | 5.52e-150 | 430 |
| Msa0044510 | AT4G33920.1 | 52.344 | 384 | 155 | 5 | 1 | 381 | 1 | 359 | 6.31e-142 | 409 |
| Msa0044510 | AT5G06750.3 | 55.780 | 346 | 139 | 4 | 34 | 375 | 43 | 378 | 1.88e-139 | 403 |
| Msa0044510 | AT5G06750.1 | 55.780 | 346 | 139 | 4 | 34 | 375 | 43 | 378 | 1.88e-139 | 403 |
| Msa0044510 | AT3G17090.2 | 52.761 | 326 | 129 | 5 | 1 | 312 | 1 | 315 | 1.52e-118 | 347 |
| Msa0044510 | AT4G33920.2 | 55.000 | 280 | 118 | 3 | 105 | 381 | 2 | 276 | 1.20e-110 | 327 |
| Msa0044510 | AT5G06750.2 | 52.805 | 303 | 131 | 5 | 77 | 375 | 2 | 296 | 4.38e-108 | 320 |
| Msa0044510 | AT4G33920.3 | 55.777 | 251 | 103 | 3 | 134 | 381 | 1 | 246 | 1.64e-100 | 300 |
| Msa0044510 | AT3G16560.1 | 30.341 | 323 | 181 | 8 | 81 | 365 | 175 | 491 | 5.42e-40 | 149 |
| Msa0044510 | AT3G16560.4 | 30.341 | 323 | 181 | 8 | 81 | 365 | 175 | 491 | 5.42e-40 | 149 |
| Msa0044510 | AT3G16560.2 | 30.341 | 323 | 181 | 8 | 81 | 365 | 175 | 491 | 5.42e-40 | 149 |
| Msa0044510 | AT5G02400.1 | 32.258 | 279 | 147 | 6 | 118 | 359 | 396 | 669 | 6.99e-38 | 145 |
| Msa0044510 | AT3G09400.1 | 32.609 | 276 | 143 | 8 | 118 | 359 | 379 | 645 | 1.49e-37 | 144 |
| Msa0044510 | AT1G07630.1 | 29.643 | 280 | 155 | 5 | 117 | 359 | 383 | 657 | 1.12e-35 | 139 |
| Msa0044510 | AT2G28890.1 | 29.930 | 284 | 154 | 6 | 116 | 359 | 371 | 649 | 9.95e-35 | 136 |
| Msa0044510 | AT2G35350.1 | 28.716 | 296 | 160 | 5 | 115 | 364 | 489 | 779 | 2.81e-34 | 135 |
| Msa0044510 | AT3G16560.3 | 30.208 | 288 | 157 | 8 | 81 | 330 | 175 | 456 | 5.45e-32 | 126 |
| Msa0044510 | AT1G07160.1 | 29.537 | 281 | 143 | 7 | 77 | 355 | 149 | 376 | 4.26e-29 | 117 |
| Msa0044510 | AT3G09400.2 | 31.818 | 242 | 122 | 8 | 118 | 325 | 379 | 611 | 3.24e-28 | 117 |
| Msa0044510 | AT2G40180.1 | 28.912 | 294 | 146 | 11 | 73 | 359 | 152 | 389 | 1.07e-27 | 113 |
| Msa0044510 | AT2G46920.3 | 35.106 | 188 | 112 | 4 | 186 | 369 | 667 | 848 | 1.17e-27 | 115 |
| Msa0044510 | AT2G46920.1 | 35.106 | 188 | 112 | 4 | 186 | 369 | 667 | 848 | 1.17e-27 | 115 |
| Msa0044510 | AT2G46920.2 | 35.106 | 188 | 112 | 4 | 186 | 369 | 667 | 848 | 1.17e-27 | 115 |
| Msa0044510 | AT2G46920.4 | 35.106 | 188 | 112 | 4 | 186 | 369 | 667 | 848 | 1.17e-27 | 115 |
| Msa0044510 | AT2G30020.1 | 28.727 | 275 | 140 | 8 | 83 | 355 | 172 | 392 | 7.82e-25 | 105 |
| Msa0044510 | AT1G67820.2 | 29.333 | 225 | 116 | 5 | 80 | 302 | 114 | 297 | 3.04e-23 | 100 |
| Msa0044510 | AT1G67820.1 | 29.333 | 225 | 116 | 5 | 80 | 302 | 150 | 333 | 3.62e-23 | 101 |
| Msa0044510 | AT4G28400.3 | 28.374 | 289 | 153 | 12 | 42 | 324 | 10 | 250 | 4.27e-21 | 92.4 |
| Msa0044510 | AT4G28400.1 | 28.374 | 289 | 153 | 12 | 42 | 324 | 32 | 272 | 6.89e-21 | 92.0 |
| Msa0044510 | AT1G43900.1 | 29.433 | 282 | 133 | 10 | 75 | 353 | 148 | 366 | 8.83e-21 | 93.2 |
| Msa0044510 | AT2G20630.1 | 30.165 | 242 | 119 | 10 | 84 | 319 | 66 | 263 | 9.18e-21 | 91.7 |
| Msa0044510 | AT4G31750.2 | 27.642 | 246 | 131 | 8 | 83 | 323 | 66 | 269 | 1.13e-20 | 92.0 |
| Msa0044510 | AT4G31750.1 | 27.642 | 246 | 131 | 7 | 83 | 323 | 66 | 269 | 1.21e-20 | 92.0 |
| Msa0044510 | AT4G31750.3 | 27.642 | 246 | 131 | 7 | 83 | 323 | 66 | 269 | 1.21e-20 | 92.0 |
| Msa0044510 | AT1G34750.2 | 26.923 | 338 | 173 | 12 | 19 | 355 | 17 | 281 | 1.70e-20 | 91.3 |
| Msa0044510 | AT1G34750.1 | 26.923 | 338 | 173 | 12 | 19 | 355 | 17 | 281 | 1.70e-20 | 91.3 |
| Msa0044510 | AT1G34750.3 | 26.923 | 338 | 173 | 12 | 19 | 355 | 17 | 281 | 1.70e-20 | 91.3 |
| Msa0044510 | AT2G20630.2 | 30.165 | 242 | 119 | 10 | 84 | 319 | 66 | 263 | 1.74e-20 | 91.3 |
| Msa0044510 | AT4G26080.1 | 26.829 | 287 | 162 | 9 | 81 | 355 | 172 | 422 | 2.34e-20 | 92.8 |
| Msa0044510 | AT5G53140.1 | 24.126 | 286 | 169 | 9 | 36 | 319 | 93 | 332 | 1.73e-19 | 90.1 |
| Msa0044510 | AT5G53140.2 | 24.126 | 286 | 169 | 9 | 36 | 319 | 93 | 332 | 1.73e-19 | 90.1 |
| Msa0044510 | AT5G10740.1 | 27.572 | 243 | 128 | 8 | 83 | 320 | 66 | 265 | 1.98e-19 | 89.4 |
| Msa0044510 | AT5G10740.2 | 27.572 | 243 | 128 | 8 | 83 | 320 | 66 | 265 | 1.98e-19 | 89.4 |
| Msa0044510 | AT1G22280.3 | 28.846 | 312 | 153 | 11 | 48 | 353 | 36 | 284 | 2.41e-19 | 87.8 |
| Msa0044510 | AT5G24940.1 | 27.347 | 245 | 130 | 9 | 81 | 320 | 64 | 265 | 6.25e-19 | 88.6 |
| Msa0044510 | AT1G78200.1 | 27.915 | 283 | 153 | 10 | 48 | 324 | 35 | 272 | 6.65e-19 | 86.7 |
| Msa0044510 | AT1G78200.3 | 27.915 | 283 | 153 | 10 | 48 | 324 | 35 | 272 | 6.65e-19 | 86.7 |
| Msa0044510 | AT1G78200.2 | 27.915 | 283 | 153 | 10 | 48 | 324 | 35 | 272 | 6.65e-19 | 86.7 |
| Msa0044510 | AT2G25620.1 | 25.914 | 301 | 156 | 11 | 65 | 355 | 113 | 356 | 7.73e-19 | 87.8 |
| Msa0044510 | AT2G25620.2 | 25.914 | 301 | 156 | 11 | 65 | 355 | 113 | 356 | 7.73e-19 | 87.8 |
| Msa0044510 | AT1G22280.1 | 29.355 | 310 | 148 | 12 | 48 | 353 | 36 | 278 | 9.50e-19 | 86.3 |
| Msa0044510 | AT2G33700.1 | 27.915 | 283 | 135 | 11 | 79 | 353 | 121 | 342 | 3.28e-18 | 85.9 |
| Msa0044510 | AT1G78200.5 | 27.574 | 272 | 146 | 10 | 59 | 324 | 1 | 227 | 5.05e-18 | 83.2 |
| Msa0044510 | AT1G78200.4 | 27.574 | 272 | 146 | 10 | 59 | 324 | 1 | 227 | 5.05e-18 | 83.2 |
| Msa0044510 | AT1G07430.1 | 28.270 | 237 | 118 | 6 | 81 | 303 | 157 | 355 | 7.27e-18 | 85.5 |
| Msa0044510 | AT3G15260.2 | 26.844 | 339 | 171 | 13 | 19 | 353 | 21 | 286 | 3.57e-17 | 81.6 |
| Msa0044510 | AT3G15260.1 | 26.844 | 339 | 171 | 13 | 19 | 353 | 21 | 286 | 3.57e-17 | 81.6 |
| Msa0044510 | AT5G57050.2 | 25.965 | 285 | 168 | 7 | 81 | 355 | 120 | 371 | 1.03e-16 | 81.6 |
| Msa0044510 | AT5G57050.1 | 25.965 | 285 | 168 | 7 | 81 | 355 | 160 | 411 | 1.04e-16 | 81.6 |
| Msa0044510 | AT3G51470.2 | 26.000 | 250 | 137 | 7 | 79 | 320 | 60 | 269 | 1.69e-16 | 80.1 |
| Msa0044510 | AT3G51470.1 | 26.000 | 250 | 137 | 7 | 79 | 320 | 104 | 313 | 1.78e-16 | 80.5 |
| Msa0044510 | AT4G08260.1 | 26.007 | 273 | 117 | 8 | 83 | 355 | 21 | 208 | 2.94e-16 | 77.4 |
| Msa0044510 | AT1G18030.1 | 27.626 | 257 | 133 | 9 | 83 | 320 | 111 | 333 | 3.84e-16 | 79.7 |
| Msa0044510 | AT3G16800.2 | 27.243 | 301 | 150 | 13 | 80 | 355 | 92 | 348 | 4.54e-16 | 79.3 |
| Msa0044510 | AT3G16800.1 | 27.243 | 301 | 150 | 13 | 80 | 355 | 92 | 348 | 4.54e-16 | 79.3 |
| Msa0044510 | AT3G16800.3 | 27.243 | 301 | 150 | 13 | 80 | 355 | 92 | 348 | 4.54e-16 | 79.3 |
| Msa0044510 | AT1G72770.4 | 26.710 | 307 | 154 | 10 | 79 | 355 | 236 | 501 | 5.02e-16 | 80.1 |
| Msa0044510 | AT1G72770.1 | 26.710 | 307 | 154 | 10 | 79 | 355 | 236 | 501 | 5.02e-16 | 80.1 |
| Msa0044510 | AT1G72770.3 | 26.710 | 307 | 154 | 10 | 79 | 355 | 236 | 501 | 5.02e-16 | 80.1 |
| Msa0044510 | AT1G17550.1 | 26.646 | 319 | 156 | 13 | 72 | 355 | 226 | 501 | 5.20e-16 | 80.1 |
| Msa0044510 | AT1G17550.2 | 26.646 | 319 | 156 | 13 | 72 | 355 | 226 | 501 | 5.20e-16 | 80.1 |
| Msa0044510 | AT4G28400.2 | 27.559 | 254 | 133 | 10 | 42 | 291 | 32 | 238 | 2.35e-15 | 75.9 |
| Msa0044510 | AT3G62260.3 | 27.692 | 260 | 145 | 10 | 71 | 319 | 17 | 244 | 2.78e-15 | 76.3 |
| Msa0044510 | AT3G05640.2 | 27.797 | 295 | 155 | 13 | 81 | 355 | 93 | 349 | 3.70e-15 | 76.6 |
| Msa0044510 | AT3G05640.1 | 27.797 | 295 | 155 | 13 | 81 | 355 | 93 | 349 | 3.70e-15 | 76.6 |
| Msa0044510 | AT3G05640.3 | 27.797 | 295 | 155 | 13 | 81 | 355 | 93 | 349 | 3.70e-15 | 76.6 |
| Msa0044510 | AT5G26010.1 | 27.027 | 296 | 161 | 11 | 78 | 355 | 66 | 324 | 5.36e-15 | 75.9 |
| Msa0044510 | AT5G59220.1 | 27.984 | 243 | 122 | 8 | 81 | 310 | 148 | 350 | 5.81e-15 | 76.6 |
| Msa0044510 | AT3G62260.1 | 27.692 | 260 | 145 | 10 | 71 | 319 | 106 | 333 | 7.07e-15 | 75.9 |
| Msa0044510 | AT3G62260.2 | 27.692 | 260 | 145 | 10 | 71 | 319 | 107 | 334 | 8.01e-15 | 75.9 |
| Msa0044510 | AT4G31860.3 | 25.830 | 271 | 121 | 11 | 80 | 303 | 51 | 288 | 1.21e-14 | 74.3 |
| Msa0044510 | AT4G31860.1 | 25.830 | 271 | 121 | 11 | 80 | 303 | 51 | 288 | 1.61e-14 | 74.7 |
| Msa0044510 | AT3G16800.4 | 29.515 | 227 | 110 | 9 | 141 | 355 | 65 | 253 | 1.64e-14 | 73.6 |
| Msa0044510 | AT3G16800.6 | 29.515 | 227 | 110 | 9 | 141 | 355 | 65 | 253 | 1.64e-14 | 73.6 |
| Msa0044510 | AT5G27930.1 | 29.064 | 203 | 97 | 8 | 161 | 354 | 189 | 353 | 6.26e-14 | 73.2 |
| Msa0044510 | AT5G27930.2 | 29.064 | 203 | 97 | 8 | 161 | 354 | 189 | 353 | 6.26e-14 | 73.2 |
| Msa0044510 | AT1G34750.4 | 24.818 | 274 | 152 | 9 | 19 | 291 | 17 | 237 | 2.95e-13 | 69.7 |
| Msa0044510 | AT2G34740.1 | 24.176 | 273 | 144 | 9 | 83 | 353 | 121 | 332 | 4.79e-13 | 70.1 |
| Msa0044510 | AT1G48040.1 | 25.904 | 332 | 162 | 14 | 49 | 357 | 81 | 351 | 7.57e-13 | 69.7 |
| Msa0044510 | AT1G79630.8 | 28.750 | 240 | 98 | 10 | 154 | 365 | 212 | 406 | 4.68e-12 | 67.8 |
| Msa0044510 | AT1G79630.1 | 28.750 | 240 | 98 | 10 | 154 | 365 | 216 | 410 | 4.72e-12 | 67.8 |
| Msa0044510 | AT1G79630.6 | 28.750 | 240 | 98 | 10 | 154 | 365 | 106 | 300 | 5.12e-12 | 67.4 |
| Msa0044510 | AT1G79630.3 | 28.750 | 240 | 98 | 10 | 154 | 365 | 106 | 300 | 5.12e-12 | 67.4 |
| Msa0044510 | AT1G79630.4 | 28.750 | 240 | 98 | 10 | 154 | 365 | 106 | 300 | 5.12e-12 | 67.4 |
| Msa0044510 | AT1G79630.5 | 28.750 | 240 | 98 | 10 | 154 | 365 | 106 | 300 | 5.12e-12 | 67.4 |
| Msa0044510 | AT1G79630.2 | 28.750 | 240 | 98 | 10 | 154 | 365 | 146 | 340 | 7.17e-12 | 67.0 |
| Msa0044510 | AT1G79630.7 | 28.750 | 240 | 98 | 10 | 154 | 365 | 146 | 340 | 7.17e-12 | 67.0 |
| Msa0044510 | AT1G18030.2 | 26.577 | 222 | 115 | 8 | 84 | 291 | 112 | 299 | 1.54e-11 | 65.1 |
| Msa0044510 | AT4G32950.1 | 26.255 | 259 | 151 | 10 | 79 | 325 | 70 | 300 | 4.77e-11 | 63.9 |
| Msa0044510 | AT2G40860.4 | 25.267 | 281 | 149 | 10 | 81 | 355 | 325 | 550 | 8.44e-11 | 63.9 |
Find 128 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTTAATTTAATTTAAT+TGG | 0.103600 | 1_1:+76097388 | Msa0044510:three_prime_UTR |
| TAGATCTGGGTATTTATTTA+TGG | 0.142679 | 1_1:-76094078 | None:intergenic |
| GATCTTACCAAAGAATTTAT+TGG | 0.192729 | 1_1:-76094148 | None:intergenic |
| TGGTGATTCCAGGGCTGTTT+TGG | 0.205002 | 1_1:+76095948 | Msa0044510:CDS |
| CACCAAGATTTGCTATATAA+AGG | 0.237162 | 1_1:-76095930 | None:intergenic |
| TCTTCATCCAATAAATTCTT+TGG | 0.257491 | 1_1:+76094141 | Msa0044510:five_prime_UTR |
| CTGATCTTCCAGCAAGTTAT+TGG | 0.273921 | 1_1:-76094904 | None:intergenic |
| TTCCCTGGTATTTCTGTTAG+AGG | 0.293299 | 1_1:+76097289 | Msa0044510:CDS |
| TTGAATGAGTCTGGCCCTTA+TGG | 0.294051 | 1_1:+76094954 | Msa0044510:CDS |
| CTACTACTTTACTTGTGAAA+TGG | 0.300020 | 1_1:-76093990 | None:intergenic |
| GGCCTGCTTTCGGCCGGGTT+CGG | 0.311713 | 1_1:+76094770 | Msa0044510:CDS |
| TACTCTTAAGATGTTGAAAT+AGG | 0.323585 | 1_1:-76095040 | None:intergenic |
| GGCCCTTATGGAACCTTTGT+TGG | 0.326218 | 1_1:+76094966 | Msa0044510:CDS |
| GCTGCAATTTGCGGTGAAAT+TGG | 0.328123 | 1_1:-76095865 | None:intergenic |
| TTATCTGTTGTAGTAGTAAA+AGG | 0.336468 | 1_1:-76097346 | None:intergenic |
| ATTGTTGTTGTGAGGATTGC+AGG | 0.346192 | 1_1:+76094628 | Msa0044510:five_prime_UTR |
| TAGCAAATCTTGGTGATTCC+AGG | 0.350723 | 1_1:+76095938 | Msa0044510:CDS |
| TAATTTAATTTAATTTAATT+GGG | 0.357456 | 1_1:+76097389 | Msa0044510:three_prime_UTR |
| TACTACTTTACTTGTGAAAT+GGG | 0.361108 | 1_1:-76093989 | None:intergenic |
| ACCAAGATTTGCTATATAAA+GGG | 0.370067 | 1_1:-76095929 | None:intergenic |
| ACAACAATATTTGAATCATC+AGG | 0.370480 | 1_1:-76096072 | None:intergenic |
| TTAATGTCCACTTCATAAAC+AGG | 0.370496 | 1_1:+76097525 | Msa0044510:three_prime_UTR |
| CTTGTTGGTGTTATTTGTAA+TGG | 0.371085 | 1_1:+76095904 | Msa0044510:CDS |
| ATAAAATTGACCGTGGAGTT+CGG | 0.374935 | 1_1:+76097188 | Msa0044510:CDS |
| GTTGGGTCTTGCTGTCTTGT+TGG | 0.378018 | 1_1:+76095889 | Msa0044510:CDS |
| ACCCTTTATATAGCAAATCT+TGG | 0.384018 | 1_1:+76095928 | Msa0044510:CDS |
| GCGTGTGAAATCATTAGATC+TGG | 0.385126 | 1_1:-76094092 | None:intergenic |
| TTTGAAGGCCTGCTTTCGGC+CGG | 0.392079 | 1_1:+76094764 | Msa0044510:CDS |
| GGAAGATTAGTTAAAGCAAC+TGG | 0.395251 | 1_1:+76095970 | Msa0044510:CDS |
| TTTATTATATTTGCATCTGA+TGG | 0.398456 | 1_1:+76096540 | Msa0044510:CDS |
| TATTTGCATCTGATGGGCTC+TGG | 0.400975 | 1_1:+76096547 | Msa0044510:CDS |
| TTGGTGAACCTCTGCTTAGC+TGG | 0.401287 | 1_1:+76093908 | Msa0044510:five_prime_UTR |
| GTAAACAAGATGGACTATTA+TGG | 0.406307 | 1_1:+76094826 | Msa0044510:CDS |
| AGTCGAAACTTGGCATATAA+TGG | 0.416306 | 1_1:-76096441 | None:intergenic |
| AACTGATGCACTAGTATTGA+TGG | 0.417738 | 1_1:-76096501 | None:intergenic |
| TAATTGGGATCTATACTAGT+AGG | 0.418748 | 1_1:+76097404 | Msa0044510:three_prime_UTR |
| TGCTTTCGGCCGGGTTCGGA+TGG | 0.422995 | 1_1:+76094774 | Msa0044510:CDS |
| AGTTTGAGTTTGAATGAGTC+TGG | 0.426624 | 1_1:+76094945 | Msa0044510:CDS |
| TTGATAAACCGCGACGTCTC+AGG | 0.427072 | 1_1:-76095011 | None:intergenic |
| TGAAATCCTTGATGGTTGTT+TGG | 0.428633 | 1_1:+76094707 | Msa0044510:five_prime_UTR |
| GGTGAAATGAGGTATGTTAT+CGG | 0.430907 | 1_1:+76094728 | Msa0044510:exon |
| TTAGATGTTGAAATCCTTGA+TGG | 0.431122 | 1_1:+76094699 | Msa0044510:five_prime_UTR |
| GACCCAACTGCTGCAATTTG+CGG | 0.431869 | 1_1:-76095874 | None:intergenic |
| GGTATTTCTGTTAGAGGAGG+TGG | 0.433488 | 1_1:+76097295 | Msa0044510:CDS |
| TTCAGACAGATTGTTAAAGA+TGG | 0.434159 | 1_1:-76097488 | None:intergenic |
| AGAAGAGGGGTTTATGTCAC+TGG | 0.439976 | 1_1:+76095828 | Msa0044510:CDS |
| TCACCGCAAATTGCAGCAGT+TGG | 0.449592 | 1_1:+76095871 | Msa0044510:CDS |
| ATTTGCATCTGATGGGCTCT+GGG | 0.451624 | 1_1:+76096548 | Msa0044510:CDS |
| GATGGTTCTGAGCTCAGTAT+TGG | 0.453050 | 1_1:-76096483 | None:intergenic |
| GATCAGAGCCAGATTGAATC+TGG | 0.453389 | 1_1:+76094921 | Msa0044510:CDS |
| TAAACCCCTCTTCTGTTGCT+TGG | 0.457911 | 1_1:-76095819 | None:intergenic |
| CACCGCAAATTGCAGCAGTT+GGG | 0.458676 | 1_1:+76095872 | Msa0044510:CDS |
| ATCCGAACCCGGCCGAAAGC+AGG | 0.463029 | 1_1:-76094772 | None:intergenic |
| CTTTACTTGTGAAATGGGAA+TGG | 0.463533 | 1_1:-76093984 | None:intergenic |
| AGTTCAAGCCAATAACTTGC+TGG | 0.463611 | 1_1:+76094896 | Msa0044510:CDS |
| TTGAAGGCCTGCTTTCGGCC+GGG | 0.465199 | 1_1:+76094765 | Msa0044510:CDS |
| CGGCTGAGGAAGTCGAAACT+TGG | 0.465922 | 1_1:-76096451 | None:intergenic |
| TTTACTTGTGAAATGGGAAT+GGG | 0.467549 | 1_1:-76093983 | None:intergenic |
| ACCTTTGTTGGCGTCTATGA+TGG | 0.469469 | 1_1:+76094978 | Msa0044510:CDS |
| ACGCCAACAAAGGTTCCATA+AGG | 0.475151 | 1_1:-76094969 | None:intergenic |
| CCTCAGATTTCTAGATGCAT+TGG | 0.482645 | 1_1:+76096381 | Msa0044510:intron |
| TCAAACTACCAGATTCAATC+TGG | 0.487886 | 1_1:-76094929 | None:intergenic |
| GCGCGCACAACGTCAGATGC+TGG | 0.493872 | 1_1:+76094801 | Msa0044510:CDS |
| TTATTATATTTGCATCTGAT+GGG | 0.499462 | 1_1:+76096541 | Msa0044510:CDS |
| CTAAGCAGAGGTTCACCAAT+GGG | 0.500506 | 1_1:-76093904 | None:intergenic |
| CATGTTGTTGTAGTTTGTGG+TGG | 0.505067 | 1_1:+76094587 | Msa0044510:intron |
| CGCGCATATCCATCCGAACC+CGG | 0.515703 | 1_1:-76094783 | None:intergenic |
| TAATCTTCCCAAAACAGCCC+TGG | 0.516311 | 1_1:-76095956 | None:intergenic |
| CGCCAACAAAGGTTCCATAA+GGG | 0.521754 | 1_1:-76094968 | None:intergenic |
| ATCAATAGAGTCTATAAGAC+AGG | 0.522519 | 1_1:+76096032 | Msa0044510:CDS |
| CTCAGTATTGGCCTCTTGAA+CGG | 0.523336 | 1_1:-76096471 | None:intergenic |
| ACTACTACAACAGATAATGA+TGG | 0.526156 | 1_1:+76097352 | Msa0044510:CDS |
| GAATGGGCAGGCAAGGAAGA+AGG | 0.527492 | 1_1:-76093967 | None:intergenic |
| GCATAATGTTTGGCGTGTGA+AGG | 0.529364 | 1_1:+76096101 | Msa0044510:CDS |
| CTATTATGGTATAAAGACTC+AGG | 0.532513 | 1_1:+76094840 | Msa0044510:CDS |
| CATAATGTTTGGCGTGTGAA+GGG | 0.533025 | 1_1:+76096102 | Msa0044510:CDS |
| GATGGTTGTTTGGTGAAATG+AGG | 0.537890 | 1_1:+76094717 | Msa0044510:five_prime_UTR |
| GCATTCCAAGCAACAGAAGA+GGG | 0.537905 | 1_1:+76095814 | Msa0044510:CDS |
| CCTGGTATTTCTGTTAGAGG+AGG | 0.538502 | 1_1:+76097292 | Msa0044510:CDS |
| GCAAGCACTGTGAAGTTCCC+TGG | 0.540576 | 1_1:+76097274 | Msa0044510:CDS |
| GACTCAGGGCAGCACATATG+TGG | 0.544741 | 1_1:+76094855 | Msa0044510:CDS |
| CCTCCTCTAACAGAAATACC+AGG | 0.545986 | 1_1:-76097292 | None:intergenic |
| AATATAATAAATTGATCTTG+AGG | 0.547024 | 1_1:-76096528 | None:intergenic |
| ATTTCACCAAACAACCATCA+AGG | 0.547233 | 1_1:-76094713 | None:intergenic |
| GACTTCCTCAGCCGTTCAAG+AGG | 0.548513 | 1_1:+76096460 | Msa0044510:CDS |
| ATTGGCCTCTTGAACGGCTG+AGG | 0.549999 | 1_1:-76096465 | None:intergenic |
| GGAGTAACATAGCATAGCAT+TGG | 0.553344 | 1_1:+76093867 | Msa0044510:five_prime_UTR |
| GCACGGGTCACTATACTAGT+TGG | 0.554112 | 1_1:+76093846 | None:intergenic |
| AAGAAGGAGTGAGGCAGACA+AGG | 0.556916 | 1_1:-76093951 | None:intergenic |
| TGTCACTGGTTTCGCAGCTG+TGG | 0.558786 | 1_1:+76095842 | Msa0044510:CDS |
| TCAGGGAATTGCAAGGAGGA+TGG | 0.563559 | 1_1:+76097108 | Msa0044510:intron |
| CTATAGTGAGTGAAAGCTGT+AGG | 0.567762 | 1_1:+76094676 | Msa0044510:five_prime_UTR |
| CGTGTGAAATCATTAGATCT+GGG | 0.567844 | 1_1:-76094091 | None:intergenic |
| TCATCATCATTGTTGTTGTG+AGG | 0.570191 | 1_1:+76094620 | Msa0044510:five_prime_UTR |
| AGCAAATCTTGGTGATTCCA+GGG | 0.574596 | 1_1:+76095939 | Msa0044510:CDS |
| TAATGGTTCTCTATTGAACT+CGG | 0.575111 | 1_1:-76096424 | None:intergenic |
| CAACAATATTTGAATCATCA+GGG | 0.575478 | 1_1:-76096071 | None:intergenic |
| GTCAGTTGATGTAATTCGCA+AGG | 0.576319 | 1_1:+76095792 | Msa0044510:CDS |
| GATGCTGGAGGTAAACAAGA+TGG | 0.576681 | 1_1:+76094816 | Msa0044510:CDS |
| GTGCTCTGTTGATAATTGCA+TGG | 0.581373 | 1_1:-76096004 | None:intergenic |
| CTTGTGAAATGGGAATGGGC+AGG | 0.586442 | 1_1:-76093979 | None:intergenic |
| CAATTACAGTGATATCATCA+TGG | 0.586712 | 1_1:-76097219 | None:intergenic |
| GAAATGGGAATGGGCAGGCA+AGG | 0.588709 | 1_1:-76093974 | None:intergenic |
| TATTGTTTCAGGGAATTGCA+AGG | 0.591708 | 1_1:+76097101 | Msa0044510:intron |
| AATGAGTATCTTACAGCGCG+AGG | 0.594025 | 1_1:-76096615 | None:intergenic |
| GGCATTCCAAGCAACAGAAG+AGG | 0.600647 | 1_1:+76095813 | Msa0044510:CDS |
| ATTAGTTAAAGCAACTGGTG+AGG | 0.614946 | 1_1:+76095975 | Msa0044510:CDS |
| GGAAATGTCGCCGAACTCCA+CGG | 0.621058 | 1_1:-76097198 | None:intergenic |
| GCTAAGCAGAGGTTCACCAA+TGG | 0.624209 | 1_1:-76093905 | None:intergenic |
| GATTTAAATAAAATTGACCG+TGG | 0.627009 | 1_1:+76097181 | Msa0044510:CDS |
| CATAGCATAGCATTGGAATG+TGG | 0.634142 | 1_1:+76093874 | Msa0044510:five_prime_UTR |
| GAATGTGGTGTGGAGCCCAT+TGG | 0.634998 | 1_1:+76093889 | Msa0044510:five_prime_UTR |
| GGTTGGAGCCAGCTAAGCAG+AGG | 0.648792 | 1_1:-76093916 | None:intergenic |
| CAGGCAAGGAAGAAGGAGTG+AGG | 0.652455 | 1_1:-76093960 | None:intergenic |
| TAGCATCCCTCACAACACAT+TGG | 0.653156 | 1_1:+76097321 | Msa0044510:CDS |
| CATTCCAAGCAACAGAAGAG+GGG | 0.653186 | 1_1:+76095815 | Msa0044510:CDS |
| TCCATCATAGACGCCAACAA+AGG | 0.655109 | 1_1:-76094979 | None:intergenic |
| CATAGCATTGGAATGTGGTG+TGG | 0.657707 | 1_1:+76093879 | Msa0044510:five_prime_UTR |
| GTTGGCGTCTATGATGGACA+TGG | 0.658289 | 1_1:+76094984 | Msa0044510:CDS |
| TATTATGGTATAAAGACTCA+GGG | 0.658621 | 1_1:+76094841 | Msa0044510:CDS |
| AAGGTGCCAATGTGTTGTGA+GGG | 0.673166 | 1_1:-76097327 | None:intergenic |
| CTCCTCTAACAGAAATACCA+GGG | 0.674687 | 1_1:-76097291 | None:intergenic |
| AAAGGTGCCAATGTGTTGTG+AGG | 0.683532 | 1_1:-76097328 | None:intergenic |
| ATGGAGGTCCTGAGACGTCG+CGG | 0.688834 | 1_1:+76095003 | Msa0044510:CDS |
| CGCACAACGTCAGATGCTGG+AGG | 0.694925 | 1_1:+76094804 | Msa0044510:CDS |
| CAATCTGTCTGAAAGAACTG+TGG | 0.707917 | 1_1:+76097498 | Msa0044510:three_prime_UTR |
| TGTTTCAGGGAATTGCAAGG+AGG | 0.712929 | 1_1:+76097104 | Msa0044510:intron |
| GGCGTCTATGATGGACATGG+AGG | 0.748970 | 1_1:+76094987 | Msa0044510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTAATTTAATTTAAT+TGG | + | chr1_1:76097388-76097407 | Msa0044510:three_prime_UTR | 0.0% |
| !!! | TAATTTAATTTAATTTAATT+GGG | + | chr1_1:76097389-76097408 | Msa0044510:three_prime_UTR | 0.0% |
| !! | ACATATAAAAAAATCAATTA+TGG | - | chr1_1:76094556-76094575 | None:intergenic | 10.0% |
| !!! | TTTTTAATCTTAACTAATAA+TGG | - | chr1_1:76096676-76096695 | None:intergenic | 10.0% |
| !!! | GATTAAAATCTTGATTTTTA+TGG | + | chr1_1:76094207-76094226 | Msa0044510:intron | 15.0% |
| !! | ATAAACTGAAATATAAACTA+TGG | - | chr1_1:76094517-76094536 | None:intergenic | 15.0% |
| !!! | ATAAATTCATATTTGGTAAT+CGG | - | chr1_1:76095718-76095737 | None:intergenic | 15.0% |
| !! | AGATTGTAAAATTTATTACA+AGG | - | chr1_1:76096357-76096376 | None:intergenic | 15.0% |
| !! | AATATAATAAATTGATCTTG+AGG | - | chr1_1:76096531-76096550 | None:intergenic | 15.0% |
| !! | AAAAGAAGAAGAAGAAAAAA+GGG | - | chr1_1:76094054-76094073 | None:intergenic | 20.0% |
| !! | AAAAAGAAGAAGAAGAAAAA+AGG | - | chr1_1:76094055-76094074 | None:intergenic | 20.0% |
| !! | AGAAAGAAAATTGAGAAAAA+GGG | - | chr1_1:76094173-76094192 | None:intergenic | 20.0% |
| !!! | TTCAGTTCTTTTTAATTGAA+AGG | - | chr1_1:76094338-76094357 | None:intergenic | 20.0% |
| !! | GTTCTCTAATCATAAATAAA+AGG | - | chr1_1:76094453-76094472 | None:intergenic | 20.0% |
| !! | TCTAGAAAGATTCAAAAAAT+AGG | + | chr1_1:76095178-76095197 | Msa0044510:intron | 20.0% |
| !!! | TAAATTCATATTTGGTAATC+GGG | - | chr1_1:76095717-76095736 | None:intergenic | 20.0% |
| !!! | TTGTTTTAAAGCATAATGTT+TGG | + | chr1_1:76096091-76096110 | Msa0044510:CDS | 20.0% |
| !! | ATCGCAAACAATTATAATAT+TGG | + | chr1_1:76096251-76096270 | Msa0044510:intron | 20.0% |
| !! | TTTATTATATTTGCATCTGA+TGG | + | chr1_1:76096540-76096559 | Msa0044510:CDS | 20.0% |
| !! | TTATTATATTTGCATCTGAT+GGG | + | chr1_1:76096541-76096560 | Msa0044510:CDS | 20.0% |
| !!! | TTTTTAGACTGAAAACTTAA+GGG | + | chr1_1:76096711-76096730 | Msa0044510:intron | 20.0% |
| !!! | TTTTTTGACTGAAAACTTAA+GGG | + | chr1_1:76096877-76096896 | Msa0044510:intron | 20.0% |
| !!! | GATCACATATAATTTGTTAT+AGG | + | chr1_1:76097021-76097040 | Msa0044510:intron | 20.0% |
| !!! | ATGTTTTATGTTATTGTTTC+AGG | + | chr1_1:76097090-76097109 | Msa0044510:intron | 20.0% |
| !!! | TGTTTTATGTTATTGTTTCA+GGG | + | chr1_1:76097091-76097110 | Msa0044510:intron | 20.0% |
| !!! | TTAAATTGCATATCTTTTGA+AGG | + | chr1_1:76097451-76097470 | Msa0044510:three_prime_UTR | 20.0% |
| ! | TACTACTTTACTTGTGAAAT+GGG | - | chr1_1:76093992-76094011 | None:intergenic | 25.0% |
| ! | AAAGAAGAAGAAGAAAAAAG+GGG | - | chr1_1:76094053-76094072 | None:intergenic | 25.0% |
| ! | TAGATCTGGGTATTTATTTA+TGG | - | chr1_1:76094081-76094100 | None:intergenic | 25.0% |
| ! | TCTTCATCCAATAAATTCTT+TGG | + | chr1_1:76094141-76094160 | Msa0044510:five_prime_UTR | 25.0% |
| ! | GATCTTACCAAAGAATTTAT+TGG | - | chr1_1:76094151-76094170 | None:intergenic | 25.0% |
| ! | GAGAAAGAAAATTGAGAAAA+AGG | - | chr1_1:76094174-76094193 | None:intergenic | 25.0% |
| ! | CAATGTAAAAATGTCAACAA+TGG | + | chr1_1:76094258-76094277 | Msa0044510:intron | 25.0% |
| !!! | TTTTTTCTCTGACCAATTTT+TGG | - | chr1_1:76094304-76094323 | None:intergenic | 25.0% |
| ! | TATTATGGTATAAAGACTCA+GGG | + | chr1_1:76094841-76094860 | Msa0044510:CDS | 25.0% |
| ! | TACTCTTAAGATGTTGAAAT+AGG | - | chr1_1:76095043-76095062 | None:intergenic | 25.0% |
| !!! | TTTTCTTGGTTCTAAAAGAT+GGG | - | chr1_1:76095151-76095170 | None:intergenic | 25.0% |
| !!! | ATTTTCTTGGTTCTAAAAGA+TGG | - | chr1_1:76095152-76095171 | None:intergenic | 25.0% |
| !! | TTCTAGATAAGTGATTTTCT+TGG | - | chr1_1:76095165-76095184 | None:intergenic | 25.0% |
| ! | ATGAGACAGAAATATTATCT+CGG | - | chr1_1:76095239-76095258 | None:intergenic | 25.0% |
| !! | ATTCTTTTGTTGGTATATAC+TGG | - | chr1_1:76095268-76095287 | None:intergenic | 25.0% |
| !! | TAAGAGAATGATTCTTTTGT+TGG | - | chr1_1:76095278-76095297 | None:intergenic | 25.0% |
| !! | TTTTTGTGGCATTAATTCAA+TGG | - | chr1_1:76095394-76095413 | None:intergenic | 25.0% |
| !!! | TGTATATCTGCTATTTTTTG+TGG | - | chr1_1:76095408-76095427 | None:intergenic | 25.0% |
| !!! | GATTACAAAGTACTTTTCTT+GGG | - | chr1_1:76095499-76095518 | None:intergenic | 25.0% |
| ! | AATGTATTGTCGAATAATTC+AGG | - | chr1_1:76095590-76095609 | None:intergenic | 25.0% |
| !!! | ACCAAGATTTGCTATATAAA+GGG | - | chr1_1:76095932-76095951 | None:intergenic | 25.0% |
| ! | CAACAATATTTGAATCATCA+GGG | - | chr1_1:76096074-76096093 | None:intergenic | 25.0% |
| ! | ACAACAATATTTGAATCATC+AGG | - | chr1_1:76096075-76096094 | None:intergenic | 25.0% |
| !! | CTTTTTAGACTGAAAACTTA+AGG | + | chr1_1:76096710-76096729 | Msa0044510:intron | 25.0% |
| !! | AACGTTTTTATTGCAAGTAT+CGG | + | chr1_1:76096747-76096766 | Msa0044510:intron | 25.0% |
| ! | TGAGTAATCTTGACTAATAA+TGG | - | chr1_1:76096810-76096829 | None:intergenic | 25.0% |
| !!! | CTTTTTTGACTGAAAACTTA+AGG | + | chr1_1:76096876-76096895 | Msa0044510:intron | 25.0% |
| ! | AAAATTTGTGCGGATAATTT+AGG | + | chr1_1:76096973-76096992 | Msa0044510:intron | 25.0% |
| ! | TATGTGATCTCTATAAATCA+TGG | - | chr1_1:76097010-76097029 | None:intergenic | 25.0% |
| ! | GATTTAAATAAAATTGACCG+TGG | + | chr1_1:76097181-76097200 | Msa0044510:CDS | 25.0% |
| ! | TTATCTGTTGTAGTAGTAAA+AGG | - | chr1_1:76097349-76097368 | None:intergenic | 25.0% |
| !!! | ATAAACAGGATTTTTGTTTG+TGG | + | chr1_1:76097539-76097558 | Msa0044510:three_prime_UTR | 25.0% |
| TTTACTTGTGAAATGGGAAT+GGG | - | chr1_1:76093986-76094005 | None:intergenic | 30.0% | |
| CTACTACTTTACTTGTGAAA+TGG | - | chr1_1:76093993-76094012 | None:intergenic | 30.0% | |
| AAGAAGAAGAAGAAAAAAGG+GGG | - | chr1_1:76094052-76094071 | None:intergenic | 30.0% | |
| ATATTGAGCTGACCAAAAAT+TGG | + | chr1_1:76094289-76094308 | Msa0044510:intron | 30.0% | |
| AATTGGTCAGAGAAAAAAGT+TGG | + | chr1_1:76094306-76094325 | Msa0044510:intron | 30.0% | |
| !! | AGAACCCAATTTCTGTTTTT+GGG | + | chr1_1:76094468-76094487 | Msa0044510:intron | 30.0% |
| TTAGATGTTGAAATCCTTGA+TGG | + | chr1_1:76094699-76094718 | Msa0044510:five_prime_UTR | 30.0% | |
| !! | GTAAACAAGATGGACTATTA+TGG | + | chr1_1:76094826-76094845 | Msa0044510:CDS | 30.0% |
| CTATTATGGTATAAAGACTC+AGG | + | chr1_1:76094840-76094859 | Msa0044510:CDS | 30.0% | |
| TCTCTTATCAGATAAACTGT+TGG | + | chr1_1:76095291-76095310 | Msa0044510:intron | 30.0% | |
| ! | CTGTTTAATTGCATGCATTT+TGG | + | chr1_1:76095457-76095476 | Msa0044510:intron | 30.0% |
| !! | GGATTACAAAGTACTTTTCT+TGG | - | chr1_1:76095500-76095519 | None:intergenic | 30.0% |
| TGACCAAACTTTACTTATCT+CGG | - | chr1_1:76095532-76095551 | None:intergenic | 30.0% | |
| AGTAAAGTTTGGTCAAAGAT+TGG | + | chr1_1:76095537-76095556 | Msa0044510:intron | 30.0% | |
| AAACAAATGATTGAGCTAAG+TGG | - | chr1_1:76095629-76095648 | None:intergenic | 30.0% | |
| CTTTCTCTACTTCAAATTTC+AGG | + | chr1_1:76095745-76095764 | Msa0044510:intron | 30.0% | |
| !! | CTTGTTGGTGTTATTTGTAA+TGG | + | chr1_1:76095904-76095923 | Msa0044510:CDS | 30.0% |
| ACCCTTTATATAGCAAATCT+TGG | + | chr1_1:76095928-76095947 | Msa0044510:CDS | 30.0% | |
| !! | CACCAAGATTTGCTATATAA+AGG | - | chr1_1:76095933-76095952 | None:intergenic | 30.0% |
| ATCAATAGAGTCTATAAGAC+AGG | + | chr1_1:76096032-76096051 | Msa0044510:CDS | 30.0% | |
| GTTCTTCATTTCATGAAACT+TGG | + | chr1_1:76096323-76096342 | Msa0044510:intron | 30.0% | |
| ATTTCATGAAACTTGGAAGT+TGG | + | chr1_1:76096330-76096349 | Msa0044510:intron | 30.0% | |
| TTTCATGAAACTTGGAAGTT+GGG | + | chr1_1:76096331-76096350 | Msa0044510:intron | 30.0% | |
| TAATGGTTCTCTATTGAACT+CGG | - | chr1_1:76096427-76096446 | None:intergenic | 30.0% | |
| ! | ATCGTTTTCATTGCAAGTAT+CGG | + | chr1_1:76096925-76096944 | Msa0044510:intron | 30.0% |
| GTTTGTGTACAAAATTTGTG+CGG | + | chr1_1:76096963-76096982 | Msa0044510:intron | 30.0% | |
| GATAAGAGTTTAGTGCAAAA+TGG | + | chr1_1:76097062-76097081 | Msa0044510:intron | 30.0% | |
| CAATTACAGTGATATCATCA+TGG | - | chr1_1:76097222-76097241 | None:intergenic | 30.0% | |
| ACTACTACAACAGATAATGA+TGG | + | chr1_1:76097352-76097371 | Msa0044510:CDS | 30.0% | |
| TAATTGGGATCTATACTAGT+AGG | + | chr1_1:76097404-76097423 | Msa0044510:three_prime_UTR | 30.0% | |
| TTCAGACAGATTGTTAAAGA+TGG | - | chr1_1:76097491-76097510 | None:intergenic | 30.0% | |
| TTAATGTCCACTTCATAAAC+AGG | + | chr1_1:76097525-76097544 | Msa0044510:three_prime_UTR | 30.0% | |
| CAAAAATCCTGTTTATGAAG+TGG | - | chr1_1:76097535-76097554 | None:intergenic | 30.0% | |
| CTTTACTTGTGAAATGGGAA+TGG | - | chr1_1:76093987-76094006 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAAAAAGGG+GGG | - | chr1_1:76094051-76094070 | None:intergenic | 35.0% | |
| CGTGTGAAATCATTAGATCT+GGG | - | chr1_1:76094094-76094113 | None:intergenic | 35.0% | |
| ! | ATACTTCTGTGACTTGTGTT+TGG | + | chr1_1:76094230-76094249 | Msa0044510:intron | 35.0% |
| ! | GAGAACCCAATTTCTGTTTT+TGG | + | chr1_1:76094467-76094486 | Msa0044510:intron | 35.0% |
| GACACCCAAAAACAGAAATT+GGG | - | chr1_1:76094475-76094494 | None:intergenic | 35.0% | |
| TGACACCCAAAAACAGAAAT+TGG | - | chr1_1:76094476-76094495 | None:intergenic | 35.0% | |
| GTTCATGTTGTTGTAGTTTG+TGG | + | chr1_1:76094584-76094603 | Msa0044510:intron | 35.0% | |
| ! | TCATCATCATTGTTGTTGTG+AGG | + | chr1_1:76094620-76094639 | Msa0044510:five_prime_UTR | 35.0% |
| ! | TGAAATCCTTGATGGTTGTT+TGG | + | chr1_1:76094707-76094726 | Msa0044510:five_prime_UTR | 35.0% |
| ATTTCACCAAACAACCATCA+AGG | - | chr1_1:76094716-76094735 | None:intergenic | 35.0% | |
| GGTGAAATGAGGTATGTTAT+CGG | + | chr1_1:76094728-76094747 | Msa0044510:exon | 35.0% | |
| ! | GGAGTTAGTGAACTTTTTGA+AGG | + | chr1_1:76094749-76094768 | Msa0044510:CDS | 35.0% |
| !! | CATATGTGGTGATTTTTCGA+TGG | + | chr1_1:76094869-76094888 | Msa0044510:CDS | 35.0% |
| TCAAACTACCAGATTCAATC+TGG | - | chr1_1:76094932-76094951 | None:intergenic | 35.0% | |
| ! | AGTTTGAGTTTGAATGAGTC+TGG | + | chr1_1:76094945-76094964 | Msa0044510:CDS | 35.0% |
| ! | ATAGAGTCTACTTGTTGCTT+TGG | + | chr1_1:76095117-76095136 | Msa0044510:intron | 35.0% |
| TACACGTACTAAGAAAACAG+TGG | + | chr1_1:76095424-76095443 | Msa0044510:intron | 35.0% | |
| GTACTTTGTAATCCAGAGTT+TGG | + | chr1_1:76095506-76095525 | Msa0044510:intron | 35.0% | |
| GAAAACACAAGTTCAAATCC+TGG | - | chr1_1:76095568-76095587 | None:intergenic | 35.0% | |
| ! | GGAAGATTAGTTAAAGCAAC+TGG | + | chr1_1:76095970-76095989 | Msa0044510:CDS | 35.0% |
| ATTAGTTAAAGCAACTGGTG+AGG | + | chr1_1:76095975-76095994 | Msa0044510:CDS | 35.0% | |
| CTATCAGAGACTATCTGTTA+TGG | - | chr1_1:76096208-76096227 | None:intergenic | 35.0% | |
| AGAAAAGCCTTAAATTCCCT+TGG | + | chr1_1:76096286-76096305 | Msa0044510:intron | 35.0% | |
| CACAAATCCAAGGGAATTTA+AGG | - | chr1_1:76096296-76096315 | None:intergenic | 35.0% | |
| CAATGCATCTAGAAATCTGA+GGG | - | chr1_1:76096383-76096402 | None:intergenic | 35.0% | |
| AGTCGAAACTTGGCATATAA+TGG | - | chr1_1:76096444-76096463 | None:intergenic | 35.0% | |
| ! | AACTGATGCACTAGTATTGA+TGG | - | chr1_1:76096504-76096523 | None:intergenic | 35.0% |
| ! | TGAAAACTTAAGGGTATGTG+TGG | + | chr1_1:76096720-76096739 | Msa0044510:intron | 35.0% |
| TGAAAACTTAAGGGTCTGTA+TGG | + | chr1_1:76096886-76096905 | Msa0044510:intron | 35.0% | |
| ATCTCTATAAATCATGGCAC+AGG | - | chr1_1:76097004-76097023 | None:intergenic | 35.0% | |
| TATTGTTTCAGGGAATTGCA+AGG | + | chr1_1:76097101-76097120 | Msa0044510:intron | 35.0% | |
| ATAAAATTGACCGTGGAGTT+CGG | + | chr1_1:76097188-76097207 | Msa0044510:CDS | 35.0% | |
| GGAGTAACATAGCATAGCAT+TGG | + | chr1_1:76093867-76093886 | Msa0044510:five_prime_UTR | 40.0% | |
| ! | CATAGCATAGCATTGGAATG+TGG | + | chr1_1:76093874-76093893 | Msa0044510:five_prime_UTR | 40.0% |
| CAGACAAGGTCCATAAAAAG+CGG | - | chr1_1:76093940-76093959 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAAAAAGGGG+GGG | - | chr1_1:76094050-76094069 | None:intergenic | 40.0% | |
| GCGTGTGAAATCATTAGATC+TGG | - | chr1_1:76094095-76094114 | None:intergenic | 40.0% | |
| TCAACTTTAGCTGCTGTAGA+TGG | + | chr1_1:76094372-76094391 | Msa0044510:intron | 40.0% | |
| ! | CATGTTGTTGTAGTTTGTGG+TGG | + | chr1_1:76094587-76094606 | Msa0044510:intron | 40.0% |
| ! | ATTGTTGTTGTGAGGATTGC+AGG | + | chr1_1:76094628-76094647 | Msa0044510:five_prime_UTR | 40.0% |
| CTATAGTGAGTGAAAGCTGT+AGG | + | chr1_1:76094676-76094695 | Msa0044510:five_prime_UTR | 40.0% | |
| ! | GATGGTTGTTTGGTGAAATG+AGG | + | chr1_1:76094717-76094736 | Msa0044510:five_prime_UTR | 40.0% |
| !! | ACTTTTTGAAGGCCTGCTTT+CGG | + | chr1_1:76094760-76094779 | Msa0044510:CDS | 40.0% |
| ! | AGTTCAAGCCAATAACTTGC+TGG | + | chr1_1:76094896-76094915 | Msa0044510:CDS | 40.0% |
| CTGATCTTCCAGCAAGTTAT+TGG | - | chr1_1:76094907-76094926 | None:intergenic | 40.0% | |
| ATGGTATGCTCGTAGTCAAT+TGG | - | chr1_1:76095375-76095394 | None:intergenic | 40.0% | |
| ! | TACTTTTCTTGGGAACCTGA+GGG | - | chr1_1:76095489-76095508 | None:intergenic | 40.0% |
| TGGCCGAGATAAGTAAAGTT+TGG | + | chr1_1:76095526-76095545 | Msa0044510:intron | 40.0% | |
| GATTGAGCTAAGTGGTTGAT+GGG | - | chr1_1:76095621-76095640 | None:intergenic | 40.0% | |
| TGATTGAGCTAAGTGGTTGA+TGG | - | chr1_1:76095622-76095641 | None:intergenic | 40.0% | |
| ! | GTCAGTTGATGTAATTCGCA+AGG | + | chr1_1:76095792-76095811 | Msa0044510:CDS | 40.0% |
| ! | TAGCAAATCTTGGTGATTCC+AGG | + | chr1_1:76095938-76095957 | Msa0044510:CDS | 40.0% |
| ! | AGCAAATCTTGGTGATTCCA+GGG | + | chr1_1:76095939-76095958 | Msa0044510:CDS | 40.0% |
| !! | GTGCTCTGTTGATAATTGCA+TGG | - | chr1_1:76096007-76096026 | None:intergenic | 40.0% |
| CATAATGTTTGGCGTGTGAA+GGG | + | chr1_1:76096102-76096121 | Msa0044510:CDS | 40.0% | |
| CCAATGCATCTAGAAATCTG+AGG | - | chr1_1:76096384-76096403 | None:intergenic | 40.0% | |
| ! | CCTCAGATTTCTAGATGCAT+TGG | + | chr1_1:76096381-76096400 | Msa0044510:intron | 40.0% |
| ! | TTCCCTGGTATTTCTGTTAG+AGG | + | chr1_1:76097289-76097308 | Msa0044510:CDS | 40.0% |
| CTCCTCTAACAGAAATACCA+GGG | - | chr1_1:76097294-76097313 | None:intergenic | 40.0% | |
| CAATCTGTCTGAAAGAACTG+TGG | + | chr1_1:76097498-76097517 | Msa0044510:three_prime_UTR | 40.0% | |
| ! | CATAGCATTGGAATGTGGTG+TGG | + | chr1_1:76093879-76093898 | Msa0044510:five_prime_UTR | 45.0% |
| CTAAGCAGAGGTTCACCAAT+GGG | - | chr1_1:76093907-76093926 | None:intergenic | 45.0% | |
| CAAGGTCCATAAAAAGCGGT+TGG | - | chr1_1:76093936-76093955 | None:intergenic | 45.0% | |
| CTTTAGCTGCTGTAGATGGA+TGG | + | chr1_1:76094376-76094395 | Msa0044510:intron | 45.0% | |
| GATGCTGGAGGTAAACAAGA+TGG | + | chr1_1:76094816-76094835 | Msa0044510:CDS | 45.0% | |
| GATCAGAGCCAGATTGAATC+TGG | + | chr1_1:76094921-76094940 | Msa0044510:CDS | 45.0% | |
| TTGAATGAGTCTGGCCCTTA+TGG | + | chr1_1:76094954-76094973 | Msa0044510:CDS | 45.0% | |
| CGCCAACAAAGGTTCCATAA+GGG | - | chr1_1:76094971-76094990 | None:intergenic | 45.0% | |
| ACGCCAACAAAGGTTCCATA+AGG | - | chr1_1:76094972-76094991 | None:intergenic | 45.0% | |
| ACCTTTGTTGGCGTCTATGA+TGG | + | chr1_1:76094978-76094997 | Msa0044510:CDS | 45.0% | |
| TCCATCATAGACGCCAACAA+AGG | - | chr1_1:76094982-76095001 | None:intergenic | 45.0% | |
| ! | GAGTTCGAGTTTCAGCTCAA+TGG | + | chr1_1:76095337-76095356 | Msa0044510:intron | 45.0% |
| TCGAGTTTCAGCTCAATGGT+TGG | + | chr1_1:76095341-76095360 | Msa0044510:intron | 45.0% | |
| !!! | GCATTTTGGTCTTAACCCTC+AGG | + | chr1_1:76095471-76095490 | Msa0044510:intron | 45.0% |
| ! | GTACTTTTCTTGGGAACCTG+AGG | - | chr1_1:76095490-76095509 | None:intergenic | 45.0% |
| TACTTATCTCGGCCAAACTC+TGG | - | chr1_1:76095521-76095540 | None:intergenic | 45.0% | |
| GCATTCCAAGCAACAGAAGA+GGG | + | chr1_1:76095814-76095833 | Msa0044510:CDS | 45.0% | |
| CATTCCAAGCAACAGAAGAG+GGG | + | chr1_1:76095815-76095834 | Msa0044510:CDS | 45.0% | |
| TAAACCCCTCTTCTGTTGCT+TGG | - | chr1_1:76095822-76095841 | None:intergenic | 45.0% | |
| AGAAGAGGGGTTTATGTCAC+TGG | + | chr1_1:76095828-76095847 | Msa0044510:CDS | 45.0% | |
| GCTGCAATTTGCGGTGAAAT+TGG | - | chr1_1:76095868-76095887 | None:intergenic | 45.0% | |
| TAATCTTCCCAAAACAGCCC+TGG | - | chr1_1:76095959-76095978 | None:intergenic | 45.0% | |
| GCATAATGTTTGGCGTGTGA+AGG | + | chr1_1:76096101-76096120 | Msa0044510:CDS | 45.0% | |
| ACACAAGCGCACAAATCCAA+GGG | - | chr1_1:76096305-76096324 | None:intergenic | 45.0% | |
| AACACAAGCGCACAAATCCA+AGG | - | chr1_1:76096306-76096325 | None:intergenic | 45.0% | |
| !! | CTCAGTATTGGCCTCTTGAA+CGG | - | chr1_1:76096474-76096493 | None:intergenic | 45.0% |
| !! | GATGGTTCTGAGCTCAGTAT+TGG | - | chr1_1:76096486-76096505 | None:intergenic | 45.0% |
| !! | TATTTGCATCTGATGGGCTC+TGG | + | chr1_1:76096547-76096566 | Msa0044510:CDS | 45.0% |
| !! | ATTTGCATCTGATGGGCTCT+GGG | + | chr1_1:76096548-76096567 | Msa0044510:CDS | 45.0% |
| AATGAGTATCTTACAGCGCG+AGG | - | chr1_1:76096618-76096637 | None:intergenic | 45.0% | |
| !! | TTGCAAGTATCGGTCATGCT+TGG | + | chr1_1:76096757-76096776 | Msa0044510:intron | 45.0% |
| !! | TGCAAGTATCGGTCATGCTT+GGG | + | chr1_1:76096758-76096777 | Msa0044510:intron | 45.0% |
| TGTTTCAGGGAATTGCAAGG+AGG | + | chr1_1:76097104-76097123 | Msa0044510:intron | 45.0% | |
| CCTCCTCTAACAGAAATACC+AGG | - | chr1_1:76097295-76097314 | None:intergenic | 45.0% | |
| ! | CCTGGTATTTCTGTTAGAGG+AGG | + | chr1_1:76097292-76097311 | Msa0044510:CDS | 45.0% |
| ! | GGTATTTCTGTTAGAGGAGG+TGG | + | chr1_1:76097295-76097314 | Msa0044510:CDS | 45.0% |
| TAGCATCCCTCACAACACAT+TGG | + | chr1_1:76097321-76097340 | Msa0044510:CDS | 45.0% | |
| ! | AAGGTGCCAATGTGTTGTGA+GGG | - | chr1_1:76097330-76097349 | None:intergenic | 45.0% |
| !! | AAAGGTGCCAATGTGTTGTG+AGG | - | chr1_1:76097331-76097350 | None:intergenic | 45.0% |
| !! | AATATATATAAATTCATATT+TGG | - | chr1_1:76095725-76095744 | None:intergenic | 5.0% |
| GCTAAGCAGAGGTTCACCAA+TGG | - | chr1_1:76093908-76093927 | None:intergenic | 50.0% | |
| TTGGTGAACCTCTGCTTAGC+TGG | + | chr1_1:76093908-76093927 | Msa0044510:five_prime_UTR | 50.0% | |
| !!! | CTGGCTCCAACCGCTTTTTA+TGG | + | chr1_1:76093927-76093946 | Msa0044510:five_prime_UTR | 50.0% |
| AAGAAGGAGTGAGGCAGACA+AGG | - | chr1_1:76093954-76093973 | None:intergenic | 50.0% | |
| CTTGTGAAATGGGAATGGGC+AGG | - | chr1_1:76093982-76094001 | None:intergenic | 50.0% | |
| GGCCCTTATGGAACCTTTGT+TGG | + | chr1_1:76094966-76094985 | Msa0044510:CDS | 50.0% | |
| !! | GTTGGCGTCTATGATGGACA+TGG | + | chr1_1:76094984-76095003 | Msa0044510:CDS | 50.0% |
| TTGATAAACCGCGACGTCTC+AGG | - | chr1_1:76095014-76095033 | None:intergenic | 50.0% | |
| CTGTTGGAGCATAGATAGCG+AGG | + | chr1_1:76095307-76095326 | Msa0044510:intron | 50.0% | |
| !! | GGTCAAAGATTGGTCTAGCC+AGG | + | chr1_1:76095547-76095566 | Msa0044510:intron | 50.0% |
| GGCATTCCAAGCAACAGAAG+AGG | + | chr1_1:76095813-76095832 | Msa0044510:CDS | 50.0% | |
| TCACCGCAAATTGCAGCAGT+TGG | + | chr1_1:76095871-76095890 | Msa0044510:CDS | 50.0% | |
| CACCGCAAATTGCAGCAGTT+GGG | + | chr1_1:76095872-76095891 | Msa0044510:CDS | 50.0% | |
| GACCCAACTGCTGCAATTTG+CGG | - | chr1_1:76095877-76095896 | None:intergenic | 50.0% | |
| ! | GTTGGGTCTTGCTGTCTTGT+TGG | + | chr1_1:76095889-76095908 | Msa0044510:CDS | 50.0% |
| ! | TGGTGATTCCAGGGCTGTTT+TGG | + | chr1_1:76095948-76095967 | Msa0044510:CDS | 50.0% |
| !! | GGTGATTCCAGGGCTGTTTT+GGG | + | chr1_1:76095949-76095968 | Msa0044510:CDS | 50.0% |
| !! | AAGTATCGGTCATGCTTGGG+TGG | + | chr1_1:76096761-76096780 | Msa0044510:intron | 50.0% |
| TCAGGGAATTGCAAGGAGGA+TGG | + | chr1_1:76097108-76097127 | Msa0044510:intron | 50.0% | |
| GAATGTGGTGTGGAGCCCAT+TGG | + | chr1_1:76093889-76093908 | Msa0044510:five_prime_UTR | 55.0% | |
| CAGGCAAGGAAGAAGGAGTG+AGG | - | chr1_1:76093963-76093982 | None:intergenic | 55.0% | |
| GAATGGGCAGGCAAGGAAGA+AGG | - | chr1_1:76093970-76093989 | None:intergenic | 55.0% | |
| GAAATGGGAATGGGCAGGCA+AGG | - | chr1_1:76093977-76093996 | None:intergenic | 55.0% | |
| TTTGAAGGCCTGCTTTCGGC+CGG | + | chr1_1:76094764-76094783 | Msa0044510:CDS | 55.0% | |
| GACTCAGGGCAGCACATATG+TGG | + | chr1_1:76094855-76094874 | Msa0044510:CDS | 55.0% | |
| !! | GGCGTCTATGATGGACATGG+AGG | + | chr1_1:76094987-76095006 | Msa0044510:CDS | 55.0% |
| !! | TGTCACTGGTTTCGCAGCTG+TGG | + | chr1_1:76095842-76095861 | Msa0044510:CDS | 55.0% |
| CGGCTGAGGAAGTCGAAACT+TGG | - | chr1_1:76096454-76096473 | None:intergenic | 55.0% | |
| GACTTCCTCAGCCGTTCAAG+AGG | + | chr1_1:76096460-76096479 | Msa0044510:CDS | 55.0% | |
| ! | ATTGGCCTCTTGAACGGCTG+AGG | - | chr1_1:76096468-76096487 | None:intergenic | 55.0% |
| GGAAATGTCGCCGAACTCCA+CGG | - | chr1_1:76097201-76097220 | None:intergenic | 55.0% | |
| ! | GCAAGCACTGTGAAGTTCCC+TGG | + | chr1_1:76097274-76097293 | Msa0044510:CDS | 55.0% |
| GGTTGGAGCCAGCTAAGCAG+AGG | - | chr1_1:76093919-76093938 | None:intergenic | 60.0% | |
| TTGAAGGCCTGCTTTCGGCC+GGG | + | chr1_1:76094765-76094784 | Msa0044510:CDS | 60.0% | |
| CGCGCATATCCATCCGAACC+CGG | - | chr1_1:76094786-76094805 | None:intergenic | 60.0% | |
| CGCACAACGTCAGATGCTGG+AGG | + | chr1_1:76094804-76094823 | Msa0044510:CDS | 60.0% | |
| ATGGAGGTCCTGAGACGTCG+CGG | + | chr1_1:76095003-76095022 | Msa0044510:CDS | 60.0% | |
| ATCCGAACCCGGCCGAAAGC+AGG | - | chr1_1:76094775-76094794 | None:intergenic | 65.0% | |
| TGCTTTCGGCCGGGTTCGGA+TGG | + | chr1_1:76094774-76094793 | Msa0044510:CDS | 65.0% | |
| GCGCGCACAACGTCAGATGC+TGG | + | chr1_1:76094801-76094820 | Msa0044510:CDS | 65.0% | |
| GGCCTGCTTTCGGCCGGGTT+CGG | + | chr1_1:76094770-76094789 | Msa0044510:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 76093850 | 76097583 | 76093850 | ID=Msa0044510;Name=Msa0044510 |
| chr1_1 | mRNA | 76093850 | 76097583 | 76093850 | ID=Msa0044510-mRNA-1;Parent=Msa0044510;Name=Msa0044510-mRNA-1;_AED=0.17;_eAED=0.17;_QI=454|1|1|1|0.75|0.6|5|202|397 |
| chr1_1 | exon | 76093850 | 76094162 | 76093850 | ID=Msa0044510-mRNA-1:exon:25778;Parent=Msa0044510-mRNA-1 |
| chr1_1 | exon | 76094600 | 76095059 | 76094600 | ID=Msa0044510-mRNA-1:exon:25779;Parent=Msa0044510-mRNA-1 |
| chr1_1 | exon | 76095767 | 76096134 | 76095767 | ID=Msa0044510-mRNA-1:exon:25780;Parent=Msa0044510-mRNA-1 |
| chr1_1 | exon | 76096387 | 76096623 | 76096387 | ID=Msa0044510-mRNA-1:exon:25781;Parent=Msa0044510-mRNA-1 |
| chr1_1 | exon | 76097112 | 76097583 | 76097112 | ID=Msa0044510-mRNA-1:exon:25782;Parent=Msa0044510-mRNA-1 |
| chr1_1 | five_prime_UTR | 76093850 | 76094162 | 76093850 | ID=Msa0044510-mRNA-1:five_prime_utr;Parent=Msa0044510-mRNA-1 |
| chr1_1 | five_prime_UTR | 76094600 | 76094740 | 76094600 | ID=Msa0044510-mRNA-1:five_prime_utr;Parent=Msa0044510-mRNA-1 |
| chr1_1 | CDS | 76094741 | 76095059 | 76094741 | ID=Msa0044510-mRNA-1:cds;Parent=Msa0044510-mRNA-1 |
| chr1_1 | CDS | 76095767 | 76096134 | 76095767 | ID=Msa0044510-mRNA-1:cds;Parent=Msa0044510-mRNA-1 |
| chr1_1 | CDS | 76096387 | 76096623 | 76096387 | ID=Msa0044510-mRNA-1:cds;Parent=Msa0044510-mRNA-1 |
| chr1_1 | CDS | 76097112 | 76097381 | 76097112 | ID=Msa0044510-mRNA-1:cds;Parent=Msa0044510-mRNA-1 |
| chr1_1 | three_prime_UTR | 76097382 | 76097583 | 76097382 | ID=Msa0044510-mRNA-1:three_prime_utr;Parent=Msa0044510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
