Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184170 | XP_013470212.1 | 100.000 | 587 | 0 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184170 | sp|Q38950|2AAB_ARATH | 91.482 | 587 | 50 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184170 | A0A072W1U6 | 100.000 | 587 | 0 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0184170 | Msa0188700 | 0.800819 | 1.204885e-48 | -8.615850e-47 |
| Msa0184170 | Msa0544730 | 0.807007 | 6.236886e-50 | -8.615850e-47 |
| Msa0184170 | Msa0608270 | 0.820040 | 8.461906e-53 | -8.615850e-47 |
| Msa0184170 | Msa0648830 | 0.815294 | 9.950235e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184170 | MtrunA17_Chr1g0210111 | 100.000 | 587 | 0 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1196 |
| Msa0184170 | MtrunA17_Chr6g0484701 | 89.438 | 587 | 62 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1092 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184170 | AT3G25800.3 | 91.482 | 587 | 50 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1114 |
| Msa0184170 | AT3G25800.1 | 91.482 | 587 | 50 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1114 |
| Msa0184170 | AT1G13320.3 | 89.779 | 587 | 60 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1093 |
| Msa0184170 | AT1G13320.1 | 89.779 | 587 | 60 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1093 |
| Msa0184170 | AT1G25490.1 | 86.059 | 581 | 81 | 0 | 1 | 581 | 1 | 581 | 0.0 | 1050 |
| Msa0184170 | AT3G25800.2 | 92.015 | 526 | 42 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1008 |
| Msa0184170 | AT3G25800.2 | 23.431 | 478 | 319 | 5 | 151 | 586 | 36 | 508 | 4.47e-26 | 112 |
| Msa0184170 | AT1G13320.2 | 91.065 | 526 | 47 | 0 | 1 | 526 | 1 | 526 | 0.0 | 990 |
| Msa0184170 | AT1G13320.2 | 23.431 | 478 | 319 | 5 | 151 | 586 | 36 | 508 | 7.85e-24 | 105 |
| Msa0184170 | AT1G13320.4 | 91.505 | 412 | 35 | 0 | 176 | 587 | 1 | 412 | 0.0 | 785 |
| Msa0184170 | AT1G13320.4 | 21.847 | 444 | 307 | 2 | 66 | 508 | 7 | 411 | 3.36e-24 | 105 |
| Msa0184170 | AT1G13320.4 | 22.277 | 404 | 234 | 7 | 13 | 414 | 70 | 395 | 1.61e-16 | 82.4 |
Find 177 sgRNAs with CRISPR-Local
Find 534 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTATTCTTACAGGTTAT+TGG | 0.164493 | 1_4:-73409880 | Msa0184170:intron |
| TATAGAGTATATACCCTTAT+TGG | 0.198387 | 1_4:-73409776 | Msa0184170:CDS |
| TAATCTTAGTAAGTATATTT+AGG | 0.229096 | 1_4:-73416165 | None:intergenic |
| CCCTAACTGACTTGCCAATA+AGG | 0.244465 | 1_4:+73409762 | None:intergenic |
| TGGGAGAAATTAACTATAAC+TGG | 0.245047 | 1_4:+73414151 | None:intergenic |
| CTTCTTCCTTTCTTCTTTGT+TGG | 0.248515 | 1_4:-73416003 | Msa0184170:five_prime_UTR |
| TCTTTGTTGGTGTGTGTGTT+AGG | 0.253985 | 1_4:-73415990 | Msa0184170:five_prime_UTR |
| GAAAAGAATTATAGAGAAAA+TGG | 0.268708 | 1_4:+73408003 | None:intergenic |
| ACACAGACACATTTACATTA+TGG | 0.279486 | 1_4:+73408184 | None:intergenic |
| TGCACTGGCTTCAGTAATAA+TGG | 0.301392 | 1_4:-73411036 | Msa0184170:CDS |
| CCCTTATTGGCAAGTCAGTT+AGG | 0.317586 | 1_4:-73409763 | Msa0184170:CDS |
| GCTGTTCAGTTATAGCTAAA+TGG | 0.322349 | 1_4:-73408090 | Msa0184170:three_prime_UTR |
| AAATAATACCTGGTAGGTTC+GGG | 0.337984 | 1_4:+73411538 | None:intergenic |
| AGGAATTGAGATCTTGAATA+AGG | 0.343391 | 1_4:+73415918 | None:intergenic |
| AAATGGAATTAATTCCTTAC+GGG | 0.350769 | 1_4:+73415282 | None:intergenic |
| AGATCTGCTGCGACAAATCT+TGG | 0.351776 | 1_4:-73414479 | Msa0184170:CDS |
| ATGGGAATGGCTCCTGTGTT+AGG | 0.353368 | 1_4:-73411017 | Msa0184170:CDS |
| GTGCACTAGGGTAAGCAATA+TGG | 0.357861 | 1_4:+73414573 | None:intergenic |
| TATAAACGGACCTTCACTAA+TGG | 0.361296 | 1_4:+73415034 | None:intergenic |
| ATTAATTCTTTCAGAACTAC+TGG | 0.361507 | 1_4:-73415452 | Msa0184170:intron |
| TTGTTGAATTGCTGCGATTT+AGG | 0.365721 | 1_4:+73415882 | None:intergenic |
| CATGCAGTGGCTACAGGATA+AGG | 0.366050 | 1_4:-73409704 | Msa0184170:intron |
| AAAATAATACCTGGTAGGTT+CGG | 0.369896 | 1_4:+73411537 | None:intergenic |
| GTGGAGTCACTTTGTCGAAT+TGG | 0.371252 | 1_4:-73415097 | Msa0184170:CDS |
| TTCAGAAGGGATAGGAAAAT+AGG | 0.371787 | 1_4:+73410133 | None:intergenic |
| GTGGAGGGCTGTGCTGCTCT+TGG | 0.377407 | 1_4:-73414214 | Msa0184170:CDS |
| AGCCCATTACAGGGGCTAGC+AGG | 0.381150 | 1_4:+73408651 | None:intergenic |
| TCAAATGAGGGAGAGTGATT+TGG | 0.385090 | 1_4:-73415071 | Msa0184170:CDS |
| GTGACTTCAGAGCCCATTAC+AGG | 0.393410 | 1_4:+73408641 | None:intergenic |
| AACTCCGTCTTTGATGCTTC+TGG | 0.395240 | 1_4:+73414551 | None:intergenic |
| TCCACCATTGCACGTGCTCT+TGG | 0.395287 | 1_4:-73415316 | Msa0184170:CDS |
| CAATTGATGTGATTTAGTTC+TGG | 0.396465 | 1_4:-73408042 | Msa0184170:three_prime_UTR |
| CAAGCTTGCTGATGATGTTT+AGG | 0.397651 | 1_4:+73410089 | None:intergenic |
| AAACGTCTAGCTGAAGAGTT+TGG | 0.400227 | 1_4:-73409567 | Msa0184170:CDS |
| TCCCTGCTAGCCCCTGTAAT+GGG | 0.404173 | 1_4:-73408653 | Msa0184170:CDS |
| AAAATGGAATTAATTCCTTA+CGG | 0.406975 | 1_4:+73415281 | None:intergenic |
| TTGTTTGTGAAGAGCGGAAT+TGG | 0.407077 | 1_4:-73411339 | Msa0184170:intron |
| CCTTATTGGCAAGTCAGTTA+GGG | 0.408361 | 1_4:-73409762 | Msa0184170:CDS |
| AGAACTAAACAATATGTCTA+TGG | 0.410063 | 1_4:-73415428 | Msa0184170:exon |
| TGTGTTGCTCCCACCTTTGG+AGG | 0.410385 | 1_4:-73415161 | Msa0184170:CDS |
| ATAAACGGACCTTCACTAAT+GGG | 0.411293 | 1_4:+73415035 | None:intergenic |
| TCAAGATTCTGTCAGATTGT+TGG | 0.412191 | 1_4:-73414239 | Msa0184170:CDS |
| CAAGCTTGATCAAGTGAATC+AGG | 0.415479 | 1_4:-73410074 | Msa0184170:intron |
| CTTTGTTGGTGTGTGTGTTA+GGG | 0.421491 | 1_4:-73415989 | Msa0184170:five_prime_UTR |
| TTTGATGCTTCTGGTGCACT+AGG | 0.422106 | 1_4:+73414560 | None:intergenic |
| ATATGCTGAATCGCAAGATC+TGG | 0.427867 | 1_4:+73411224 | None:intergenic |
| TAGTGTGTTGCTCCCACCTT+TGG | 0.428581 | 1_4:-73415164 | Msa0184170:CDS |
| GCCACGTTGAACTTTATGTT+GGG | 0.432083 | 1_4:+73408462 | None:intergenic |
| AAAGACAATCCGACCATGTC+TGG | 0.433826 | 1_4:-73408297 | Msa0184170:CDS |
| TCTTGCAATGGCCGAAGAGT+TGG | 0.435145 | 1_4:-73415224 | Msa0184170:CDS |
| TGCTGCTCTTGGAAAACTGT+TGG | 0.437682 | 1_4:-73414203 | Msa0184170:CDS |
| GAGAGGAAAGGAAACAAAGT+TGG | 0.439813 | 1_4:-73416118 | Msa0184170:five_prime_UTR |
| CTTGCAATGGCCGAAGAGTT+GGG | 0.440999 | 1_4:-73415223 | Msa0184170:CDS |
| GCACTGGCTTCAGTAATAAT+GGG | 0.441390 | 1_4:-73411035 | Msa0184170:CDS |
| CCTAACTGACTTGCCAATAA+GGG | 0.442114 | 1_4:+73409763 | None:intergenic |
| TAGTAAGTATATTTAGGAAC+GGG | 0.442388 | 1_4:-73416159 | None:intergenic |
| ATTATTTACTGCTACTGCTA+TGG | 0.442814 | 1_4:+73415951 | None:intergenic |
| TCTTTGCATGCAGTGGCTAC+AGG | 0.448480 | 1_4:-73409710 | Msa0184170:CDS |
| CTCCCTGCTAGCCCCTGTAA+TGG | 0.448972 | 1_4:-73408654 | Msa0184170:CDS |
| ACTTAAAATCCGACAAAACT+TGG | 0.450069 | 1_4:+73411247 | None:intergenic |
| AGGATAGGCATTGGAGAGTT+CGG | 0.452760 | 1_4:-73409807 | Msa0184170:CDS |
| AATTGCCTGCAAGGCTTGGT+TGG | 0.456245 | 1_4:+73408232 | None:intergenic |
| GTCAGATTGTTGGCTGTGGA+GGG | 0.457298 | 1_4:-73414229 | Msa0184170:CDS |
| GAGGTACGCATAGCAGCTGC+TGG | 0.457521 | 1_4:-73411278 | Msa0184170:CDS |
| CGAAGCAATCGAACATATGC+AGG | 0.461313 | 1_4:+73411314 | None:intergenic |
| TTTGATGCTGCAACAACAGC+AGG | 0.464743 | 1_4:+73408602 | None:intergenic |
| TGTTGAGTATACTCATTTGA+AGG | 0.465370 | 1_4:-73414441 | Msa0184170:CDS |
| ACAGCATGTCCGTTCTGCAC+TGG | 0.468014 | 1_4:-73411051 | Msa0184170:CDS |
| CTGAAGAGTTTGGTCCTGAG+TGG | 0.470298 | 1_4:-73409557 | Msa0184170:CDS |
| TGTCAGATTGTTGGCTGTGG+AGG | 0.471075 | 1_4:-73414230 | Msa0184170:CDS |
| ATGATGTTTAGGCGCACGTC+AGG | 0.471553 | 1_4:+73410100 | None:intergenic |
| CTGGTCGACGATGGGGAAGA+TGG | 0.472695 | 1_4:+73408425 | None:intergenic |
| AGAGATTGGCAGCAGGTGAA+TGG | 0.476325 | 1_4:-73414628 | Msa0184170:CDS |
| CTCGTCTATAAGCACGGCTA+TGG | 0.479500 | 1_4:+73415387 | None:intergenic |
| GATCTGCTGCGACAAATCTT+GGG | 0.479606 | 1_4:-73414478 | Msa0184170:CDS |
| AATGAAAACTCCCAACTCTT+CGG | 0.481385 | 1_4:+73415213 | None:intergenic |
| TTGGCAAGTCAGTTAGGGGT+TGG | 0.486544 | 1_4:-73409757 | Msa0184170:CDS |
| TGCCACGTTGAACTTTATGT+TGG | 0.493209 | 1_4:+73408461 | None:intergenic |
| TACACACGTGCCACGGGCAA+CGG | 0.494661 | 1_4:-73416094 | Msa0184170:five_prime_UTR |
| CACACACCAACAAAGAAGAA+AGG | 0.498464 | 1_4:+73415997 | None:intergenic |
| TTTGACGATCTTACTCAAGA+TGG | 0.499309 | 1_4:-73414401 | Msa0184170:intron |
| TTCTGTCAGATTGTTGGCTG+TGG | 0.501983 | 1_4:-73414233 | Msa0184170:CDS |
| TCCGCAAGCTCAACAATGGC+TGG | 0.502705 | 1_4:+73409829 | None:intergenic |
| AATATACAGTCAGTTATGTC+AGG | 0.503221 | 1_4:-73414522 | Msa0184170:CDS |
| ATCCTGGGCAGGATAAGTCT+TGG | 0.503464 | 1_4:-73411615 | Msa0184170:intron |
| TTGTTGAGCTTGCGGAGGAT+AGG | 0.505703 | 1_4:-73409822 | Msa0184170:CDS |
| GTCGAATTGGATCTCAAATG+AGG | 0.507613 | 1_4:-73415084 | Msa0184170:CDS |
| GCCCATTACAGGGGCTAGCA+GGG | 0.509411 | 1_4:+73408652 | None:intergenic |
| GACATGATCAATTGCCTGCA+AGG | 0.514252 | 1_4:+73408223 | None:intergenic |
| TGTTCGACTCCACCAACATA+AGG | 0.514810 | 1_4:+73415190 | None:intergenic |
| GCATATTCTTCCTTGTGTGA+AGG | 0.516402 | 1_4:-73411207 | Msa0184170:intron |
| TTTACTGCTACTGCTATGGA+TGG | 0.516900 | 1_4:+73415955 | None:intergenic |
| CTCTCCAAGAGCACGTGCAA+TGG | 0.521419 | 1_4:+73415312 | None:intergenic |
| CGACCATGTCTGGTTGAGCT+AGG | 0.521650 | 1_4:-73408287 | Msa0184170:CDS |
| CTGTAGGCCCCGAACCTACC+AGG | 0.522431 | 1_4:-73411546 | Msa0184170:intron |
| GAATTGAGTTCAACCGCAGT+TGG | 0.526541 | 1_4:+73415347 | None:intergenic |
| ACCAGCCATTGTTGAGCTTG+CGG | 0.529024 | 1_4:-73409830 | Msa0184170:CDS |
| CCAATCCACACTATTTGTAT+CGG | 0.531881 | 1_4:-73408697 | Msa0184170:CDS |
| AGTTGGTTACACACGTGCCA+CGG | 0.532046 | 1_4:-73416101 | Msa0184170:five_prime_UTR |
| TATGCAGCACATCATTCCTC+AGG | 0.533521 | 1_4:-73409532 | Msa0184170:intron |
| CAGGGAGATAGCACGAAGAA+TGG | 0.534585 | 1_4:+73408670 | None:intergenic |
| GGCTTCAGTAATAATGGGAA+TGG | 0.534985 | 1_4:-73411030 | Msa0184170:CDS |
| TCGTCTATAAGCACGGCTAT+GGG | 0.538011 | 1_4:+73415388 | None:intergenic |
| GATCAATTGCCTGCAAGGCT+TGG | 0.538538 | 1_4:+73408228 | None:intergenic |
| CAGGAAATTCATCCTTCAGA+AGG | 0.539378 | 1_4:+73410119 | None:intergenic |
| CATAAAGTTCAACGTGGCAA+AGG | 0.543374 | 1_4:-73408457 | Msa0184170:CDS |
| TCCAAGAGCACGTGCAATGG+TGG | 0.547000 | 1_4:+73415315 | None:intergenic |
| AGCTTGCGGAGGATAGGCAT+TGG | 0.550674 | 1_4:-73409816 | Msa0184170:CDS |
| ATTTAGGTCGGTAAGTATGA+AGG | 0.552324 | 1_4:+73415898 | None:intergenic |
| TCGATTGCTTCGAGATAATG+AGG | 0.553172 | 1_4:-73411303 | Msa0184170:CDS |
| GTCTTGGCGTGTGCGTTACA+TGG | 0.553656 | 1_4:-73411599 | Msa0184170:CDS |
| CTTACAGACTGGTCGACGAT+GGG | 0.553706 | 1_4:+73408417 | None:intergenic |
| TTGATGCTTCTGGTGCACTA+GGG | 0.555376 | 1_4:+73414561 | None:intergenic |
| ATGTCAGGATGACATGCCTA+TGG | 0.556386 | 1_4:-73414507 | Msa0184170:CDS |
| CCGATACAAATAGTGTGGAT+TGG | 0.557157 | 1_4:+73408697 | None:intergenic |
| TTAGTAAGTATATTTAGGAA+CGG | 0.559405 | 1_4:-73416160 | None:intergenic |
| ATTTATACCTTTCCTAACAC+AGG | 0.560194 | 1_4:+73411005 | None:intergenic |
| ATTCATCCTTCAGAAGGGAT+AGG | 0.565148 | 1_4:+73410125 | None:intergenic |
| AGCACGGCTATGGGATAAAG+TGG | 0.566881 | 1_4:+73415397 | None:intergenic |
| AGTTATAGTTAATTTCTCCC+AGG | 0.568214 | 1_4:-73414149 | Msa0184170:intron |
| GCAGCAGATCTTCTAACCAT+AGG | 0.568443 | 1_4:+73414491 | None:intergenic |
| ATAGACCACATGCAGAGACT+CGG | 0.568738 | 1_4:+73414597 | None:intergenic |
| TGGAGAGGAGCGAACCCGTA+AGG | 0.570076 | 1_4:-73415296 | Msa0184170:CDS |
| TTTGAGCTCGTCTATAAGCA+CGG | 0.570354 | 1_4:+73415381 | None:intergenic |
| CTGTTTCAGAGATTGGCAGC+AGG | 0.570585 | 1_4:-73414635 | Msa0184170:intron |
| TAGACCACATGCAGAGACTC+GGG | 0.573420 | 1_4:+73414598 | None:intergenic |
| TTGTTGCAGCATCAAAAGAC+AGG | 0.574328 | 1_4:-73408595 | Msa0184170:intron |
| GTTGGTTACACACGTGCCAC+GGG | 0.575192 | 1_4:-73416100 | Msa0184170:five_prime_UTR |
| TGAATTGCTGCGATTTAGGT+CGG | 0.576663 | 1_4:+73415886 | None:intergenic |
| AGGACAATGAACAAAGATGA+TGG | 0.579747 | 1_4:+73407947 | None:intergenic |
| TCGAATTGGATCTCAAATGA+GGG | 0.581995 | 1_4:-73415083 | Msa0184170:CDS |
| TTTACTTTCACCGTTGCCCG+TGG | 0.584865 | 1_4:+73416084 | None:intergenic |
| AGCAATTAATCGAAGAAGAG+AGG | 0.591491 | 1_4:-73416135 | Msa0184170:five_prime_UTR |
| CTTATTGGCAAGTCAGTTAG+GGG | 0.592752 | 1_4:-73409761 | Msa0184170:CDS |
| TGACTTCAGAGCCCATTACA+GGG | 0.596267 | 1_4:+73408642 | None:intergenic |
| GCTTCGAGATAATGAGGCTG+AGG | 0.597754 | 1_4:-73411297 | Msa0184170:CDS |
| TGAAGAGTTTGGTCCTGAGT+GGG | 0.602256 | 1_4:-73409556 | Msa0184170:CDS |
| TTAATTCTTTCAGAACTACT+GGG | 0.602836 | 1_4:-73415451 | Msa0184170:intron |
| GTCATCCGATACAAATAGTG+TGG | 0.606613 | 1_4:+73408692 | None:intergenic |
| AGGTACGCATAGCAGCTGCT+GGG | 0.607950 | 1_4:-73411277 | Msa0184170:CDS |
| TCACCTAGCTCAACCAGACA+TGG | 0.608152 | 1_4:+73408284 | None:intergenic |
| TGGGTGCTCTTTGCATGCAG+TGG | 0.609251 | 1_4:-73409717 | Msa0184170:CDS |
| TTACTGCTACTGCTATGGAT+GGG | 0.609752 | 1_4:+73415956 | None:intergenic |
| CATTGCACGTGCTCTTGGAG+AGG | 0.613082 | 1_4:-73415311 | Msa0184170:CDS |
| ACTTACAGACTGGTCGACGA+TGG | 0.615901 | 1_4:+73408416 | None:intergenic |
| ATGTGCTGCATAGCCCACTC+AGG | 0.616629 | 1_4:+73409543 | None:intergenic |
| AGGAAATTCATCCTTCAGAA+GGG | 0.618150 | 1_4:+73410120 | None:intergenic |
| ATCCTCCGCAAGCTCAACAA+TGG | 0.620849 | 1_4:+73409825 | None:intergenic |
| AATGGCTCCTGTGTTAGGAA+AGG | 0.625335 | 1_4:-73411012 | Msa0184170:intron |
| TATGAGCTCTGTGAAGCTGT+AGG | 0.636068 | 1_4:-73411562 | Msa0184170:CDS |
| CTGCGTGAGGGATAAAGCTG+TGG | 0.636771 | 1_4:-73415116 | Msa0184170:CDS |
| AGCCATTGTTGAGCTTGCGG+AGG | 0.638145 | 1_4:-73409827 | Msa0184170:CDS |
| AAGATGCACACCTTCACACA+AGG | 0.638206 | 1_4:+73411197 | None:intergenic |
| TGCGGTTGAACTCAATTCGT+AGG | 0.639004 | 1_4:-73415342 | Msa0184170:CDS |
| TGTTGAGGAAACCTGCGTGA+GGG | 0.648564 | 1_4:-73415128 | Msa0184170:CDS |
| TGCACCAGAAGCATCAAAGA+CGG | 0.648876 | 1_4:-73414555 | Msa0184170:CDS |
| ACTGCCCGAGTCTCTGCATG+TGG | 0.650921 | 1_4:-73414602 | Msa0184170:CDS |
| ATATGTGCAACACAATCTTG+TGG | 0.653643 | 1_4:+73414178 | None:intergenic |
| TTAATCGAAGAAGAGAGGAA+AGG | 0.653801 | 1_4:-73416130 | Msa0184170:five_prime_UTR |
| GGGAGAAATTAACTATAACT+GGG | 0.657807 | 1_4:+73414152 | None:intergenic |
| ATGCAATGCATTCTAGAACA+AGG | 0.660580 | 1_4:+73407927 | None:intergenic |
| TTACAGACTGGTCGACGATG+GGG | 0.662319 | 1_4:+73408418 | None:intergenic |
| TGATGAGGTACTTCTTGCAA+TGG | 0.663482 | 1_4:-73415236 | Msa0184170:CDS |
| ATGTCTGGTTGAGCTAGGTG+AGG | 0.665440 | 1_4:-73408282 | Msa0184170:CDS |
| CTAGCTCAACCAGACATGGT+CGG | 0.666338 | 1_4:+73408288 | None:intergenic |
| ACTAAACAATATGTCTATGG+CGG | 0.666538 | 1_4:-73415425 | Msa0184170:exon |
| AATAATACCTGGTAGGTTCG+GGG | 0.671961 | 1_4:+73411539 | None:intergenic |
| CACAGCTTTATCCCTCACGC+AGG | 0.675394 | 1_4:+73415117 | None:intergenic |
| GAAGCAATCGAACATATGCA+GGG | 0.677348 | 1_4:+73411315 | None:intergenic |
| GACTTCAGAGCCCATTACAG+GGG | 0.683036 | 1_4:+73408643 | None:intergenic |
| AATTCAACAACACTTTCGCG+AGG | 0.691641 | 1_4:-73415869 | Msa0184170:intron |
| GAATAATGACGATGATGATG+AGG | 0.701013 | 1_4:-73415251 | Msa0184170:CDS |
| TTACTGAAGCCAGTGCAGAA+CGG | 0.706557 | 1_4:+73411042 | None:intergenic |
| GTGTTGAGGAAACCTGCGTG+AGG | 0.711414 | 1_4:-73415129 | Msa0184170:CDS |
| AAAATGATGATATCCAACTG+CGG | 0.737311 | 1_4:-73415360 | Msa0184170:CDS |
| TCACATTGATGACTTCAGCA+AGG | 0.739000 | 1_4:-73408162 | Msa0184170:three_prime_UTR |
| TCCCAACATAAAGTTCAACG+TGG | 0.775279 | 1_4:-73408463 | Msa0184170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATTATGTATCTTTAT+CGG | - | chr1_4:73410499-73410518 | Msa0184170:intron | 10.0% |
| !!! | TTATCTAATATTATAGTTTT+TGG | + | chr1_4:73410684-73410703 | None:intergenic | 10.0% |
| !! | GATTAAAATCAAATTTATAA+TGG | - | chr1_4:73411611-73411630 | Msa0184170:intron | 10.0% |
| !!! | AGTTTTTTTTAATTTAATCT+TGG | - | chr1_4:73411872-73411891 | Msa0184170:intron | 10.0% |
| !!! | TTTTCATTATTATATCTATA+TGG | + | chr1_4:73411942-73411961 | None:intergenic | 10.0% |
| !!! | TTTAAAATACATTTGATAAA+TGG | + | chr1_4:73412191-73412210 | None:intergenic | 10.0% |
| !! | AAAATTTATATTGAATTTAC+TGG | - | chr1_4:73413693-73413712 | Msa0184170:intron | 10.0% |
| !!! | ATTCTATTATTTCAATATTT+TGG | + | chr1_4:73414944-73414963 | None:intergenic | 10.0% |
| !! | GAATTGATTAATAATTTGAT+TGG | + | chr1_4:73408472-73408491 | None:intergenic | 15.0% |
| !!! | TCTTTTATTATTACTTTACA+TGG | - | chr1_4:73409074-73409093 | Msa0184170:intron | 15.0% |
| !! | ATTCTAGTAATATAACAAAT+GGG | + | chr1_4:73409383-73409402 | None:intergenic | 15.0% |
| !! | TATTCTAGTAATATAACAAA+TGG | + | chr1_4:73409384-73409403 | None:intergenic | 15.0% |
| !!! | TGTAATTCTATTTTTTTACT+TGG | - | chr1_4:73409796-73409815 | Msa0184170:CDS | 15.0% |
| !!! | GTAATTCTATTTTTTTACTT+GGG | - | chr1_4:73409797-73409816 | Msa0184170:CDS | 15.0% |
| !!! | TAATTCTATTTTTTTACTTG+GGG | - | chr1_4:73409798-73409817 | Msa0184170:CDS | 15.0% |
| !! | AGATTTATAATTATGCATAT+TGG | + | chr1_4:73410584-73410603 | None:intergenic | 15.0% |
| !! | AATATGCATAATTATAAATC+TGG | - | chr1_4:73410583-73410602 | Msa0184170:intron | 15.0% |
| !! | ATATGCATAATTATAAATCT+GGG | - | chr1_4:73410584-73410603 | Msa0184170:intron | 15.0% |
| !! | ATGCTAAAAAATATTACTTT+AGG | - | chr1_4:73410845-73410864 | Msa0184170:intron | 15.0% |
| !!! | CTCAAATCATTTTTTTTTTT+TGG | + | chr1_4:73411096-73411115 | None:intergenic | 15.0% |
| !!! | TTATAAAACAAAGTTTGTTA+CGG | - | chr1_4:73411444-73411463 | Msa0184170:intron | 15.0% |
| !! | AATAAATCAGTTAACTTAAA+AGG | - | chr1_4:73411960-73411979 | Msa0184170:intron | 15.0% |
| !!! | TTTTATCAATTGATGTATTT+TGG | - | chr1_4:73411995-73412014 | Msa0184170:intron | 15.0% |
| !!! | TTTATCAATTGATGTATTTT+GGG | - | chr1_4:73411996-73412015 | Msa0184170:intron | 15.0% |
| !! | AAAAGTAAAAACATTTAGTA+AGG | + | chr1_4:73412362-73412381 | None:intergenic | 15.0% |
| !!! | ATTTTCTCATACATATAATA+CGG | - | chr1_4:73412638-73412657 | Msa0184170:intron | 15.0% |
| !! | TAATATTACCATATATATGA+AGG | - | chr1_4:73412915-73412934 | Msa0184170:intron | 15.0% |
| !! | TTATTGTTCTCTAAATTATA+TGG | + | chr1_4:73414722-73414741 | None:intergenic | 15.0% |
| !!! | TCGTTAATTCATTTAAAATA+CGG | + | chr1_4:73414746-73414765 | None:intergenic | 15.0% |
| !!! | TTATTTCAATATTTTGGAAT+AGG | + | chr1_4:73414938-73414957 | None:intergenic | 15.0% |
| !!! | AGTCAAGTAATTTTTTTGTT+TGG | + | chr1_4:73408430-73408449 | None:intergenic | 20.0% |
| !!! | AATACTTCAAACTTTACTTT+TGG | - | chr1_4:73408540-73408559 | Msa0184170:intron | 20.0% |
| !! | AAAATGGAATTAATTCCTTA+CGG | + | chr1_4:73408786-73408805 | None:intergenic | 20.0% |
| !! | TCATTATTCTCAGTTAAAAA+TGG | + | chr1_4:73408802-73408821 | None:intergenic | 20.0% |
| !! | GCAATGAAAAAGAATATAAA+CGG | + | chr1_4:73409047-73409066 | None:intergenic | 20.0% |
| !! | TCACATTAATTTACTTTATC+TGG | - | chr1_4:73409169-73409188 | Msa0184170:intron | 20.0% |
| !! | CCATATAGTAAATATGATAA+GGG | + | chr1_4:73409997-73410016 | None:intergenic | 20.0% |
| !! | TCCATATAGTAAATATGATA+AGG | + | chr1_4:73409998-73410017 | None:intergenic | 20.0% |
| !! | GTAATATAACGTATTAGAAT+GGG | + | chr1_4:73410061-73410080 | None:intergenic | 20.0% |
| !! | AGTAATATAACGTATTAGAA+TGG | + | chr1_4:73410062-73410081 | None:intergenic | 20.0% |
| !! | AAGAAAAAAAAAACTAGCTA+AGG | + | chr1_4:73410142-73410161 | None:intergenic | 20.0% |
| !! | ATATCCATTATCTACTAAAA+TGG | - | chr1_4:73410203-73410222 | Msa0184170:intron | 20.0% |
| !! | ACTTAAATAAATAACTGTGA+TGG | - | chr1_4:73410391-73410410 | Msa0184170:intron | 20.0% |
| !!! | AGGTGGTATTTTTTATAAAA+GGG | + | chr1_4:73410449-73410468 | None:intergenic | 20.0% |
| !!! | AAGGTGGTATTTTTTATAAA+AGG | + | chr1_4:73410450-73410469 | None:intergenic | 20.0% |
| !! | TAAATGAAAAGCAATAGATA+GGG | + | chr1_4:73410538-73410557 | None:intergenic | 20.0% |
| !! | ATAGGCACAAATTAAAAAAA+AGG | - | chr1_4:73410750-73410769 | Msa0184170:intron | 20.0% |
| !! | TAGGCACAAATTAAAAAAAA+GGG | - | chr1_4:73410751-73410770 | Msa0184170:intron | 20.0% |
| !! | TATTTAAACTAAACACGTAT+AGG | - | chr1_4:73410817-73410836 | Msa0184170:intron | 20.0% |
| !! | ATTTGAGAAACTAAGAAAAT+TGG | - | chr1_4:73411109-73411128 | Msa0184170:intron | 20.0% |
| !! | TTTGAGAAACTAAGAAAATT+GGG | - | chr1_4:73411110-73411129 | Msa0184170:intron | 20.0% |
| !!! | ATTATGTAATTGTTTTTGCA+GGG | + | chr1_4:73411425-73411444 | None:intergenic | 20.0% |
| !!! | AATTATGTAATTGTTTTTGC+AGG | + | chr1_4:73411426-73411445 | None:intergenic | 20.0% |
| !!! | GTATTTTAAACATCCAAATA+AGG | - | chr1_4:73412201-73412220 | Msa0184170:intron | 20.0% |
| !!! | TAAAGAAAAAGGATCTTTTT+AGG | + | chr1_4:73412256-73412275 | None:intergenic | 20.0% |
| !! | CTAAAATGATGTAAAGAAAA+AGG | + | chr1_4:73412267-73412286 | None:intergenic | 20.0% |
| !!! | GCAATATACATTTTTTATGA+AGG | + | chr1_4:73413170-73413189 | None:intergenic | 20.0% |
| !!! | TTGAACATTATTTAGTGTTT+TGG | - | chr1_4:73413232-73413251 | Msa0184170:intron | 20.0% |
| !! | AATCTAATTAAATACTGTAC+AGG | + | chr1_4:73413396-73413415 | None:intergenic | 20.0% |
| !! | AATATCTTATCGTTAAATCT+TGG | - | chr1_4:73413466-73413485 | Msa0184170:intron | 20.0% |
| !!! | ATTACTATTTTTGTTTGTGT+AGG | - | chr1_4:73414439-73414458 | Msa0184170:CDS | 20.0% |
| !! | CAAAATAATATTGAGATACA+AGG | + | chr1_4:73414600-73414619 | None:intergenic | 20.0% |
| !!! | CAATTTGTTATATTTATGAC+AGG | + | chr1_4:73415025-73415044 | None:intergenic | 20.0% |
| !!! | TATTTTTTTATATTCAGCCT+TGG | - | chr1_4:73415082-73415101 | Msa0184170:CDS | 20.0% |
| !!! | TTCTATCATAAACCATATTT+TGG | + | chr1_4:73415109-73415128 | None:intergenic | 20.0% |
| !! | TATAGAGAAAATGGTAAAAA+TGG | + | chr1_4:73416055-73416074 | None:intergenic | 20.0% |
| !! | GAAAAGAATTATAGAGAAAA+TGG | + | chr1_4:73416064-73416083 | None:intergenic | 20.0% |
| ! | AAGTTGAAGATGAATTGAAA+AGG | + | chr1_4:73408251-73408270 | None:intergenic | 25.0% |
| ! | ATAATTTGATTGGCGTAATT+AGG | + | chr1_4:73408462-73408481 | None:intergenic | 25.0% |
| ! | ATTAATTCTTTCAGAACTAC+TGG | - | chr1_4:73408612-73408631 | Msa0184170:CDS | 25.0% |
| ! | TTAATTCTTTCAGAACTACT+GGG | - | chr1_4:73408613-73408632 | Msa0184170:CDS | 25.0% |
| ! | AGAACTAAACAATATGTCTA+TGG | - | chr1_4:73408636-73408655 | Msa0184170:CDS | 25.0% |
| ! | AAATGGAATTAATTCCTTAC+GGG | + | chr1_4:73408785-73408804 | None:intergenic | 25.0% |
| !! | ATATTTTATCCCATTAGTGA+AGG | - | chr1_4:73409020-73409039 | Msa0184170:intron | 25.0% |
| !!! | GTTCTGATACTTTTGAAAAA+TGG | - | chr1_4:73409220-73409239 | Msa0184170:intron | 25.0% |
| ! | CAACAAAACAATGTCAAATA+AGG | + | chr1_4:73409293-73409312 | None:intergenic | 25.0% |
| ! | ATATCAAACAGTTTAGACAA+TGG | + | chr1_4:73409740-73409759 | None:intergenic | 25.0% |
| ! | CCCTTATCATATTTACTATA+TGG | - | chr1_4:73409994-73410013 | Msa0184170:intron | 25.0% |
| !! | AGGTTATAAATTGATGGTTT+GGG | + | chr1_4:73410122-73410141 | None:intergenic | 25.0% |
| !! | AAGGTTATAAATTGATGGTT+TGG | + | chr1_4:73410123-73410142 | None:intergenic | 25.0% |
| ! | TAGCTAAGGTTATAAATTGA+TGG | + | chr1_4:73410128-73410147 | None:intergenic | 25.0% |
| ! | AATGGATATATAGCATTCAA+AGG | + | chr1_4:73410192-73410211 | None:intergenic | 25.0% |
| ! | AACTAACATTTCTAAGTTAC+TGG | + | chr1_4:73410311-73410330 | None:intergenic | 25.0% |
| ! | GTTAGTTAATTATGTGCAAT+TGG | - | chr1_4:73410324-73410343 | Msa0184170:intron | 25.0% |
| ! | GAAAGGTTACTGAAAATTTA+AGG | + | chr1_4:73410469-73410488 | None:intergenic | 25.0% |
| ! | ATATTAAAGAAGTGAGAGAA+AGG | + | chr1_4:73410486-73410505 | None:intergenic | 25.0% |
| ! | GTAAATGAAAAGCAATAGAT+AGG | + | chr1_4:73410539-73410558 | None:intergenic | 25.0% |
| ! | TAAATTAATGAAGGAAGAGA+GGG | + | chr1_4:73410561-73410580 | None:intergenic | 25.0% |
| ! | GCATATTGGTAAATTAATGA+AGG | + | chr1_4:73410570-73410589 | None:intergenic | 25.0% |
| ! | AATTTGAGCCTATAATTATG+CGG | + | chr1_4:73410798-73410817 | None:intergenic | 25.0% |
| ! | TTGAGAAACTAAGAAAATTG+GGG | - | chr1_4:73411111-73411130 | Msa0184170:intron | 25.0% |
| ! | GTTAATATCATGGAAAATCT+TGG | + | chr1_4:73411176-73411195 | None:intergenic | 25.0% |
| !! | ATCTTATCATGCTTCATTTT+TGG | - | chr1_4:73411491-73411510 | Msa0184170:intron | 25.0% |
| !! | TTTTGTCATTGGTAAATGTT+TGG | - | chr1_4:73411652-73411671 | Msa0184170:intron | 25.0% |
| ! | TTTGTCATTGGTAAATGTTT+GGG | - | chr1_4:73411653-73411672 | Msa0184170:intron | 25.0% |
| !!! | AATTAGTCAACCTTTTAGTT+TGG | - | chr1_4:73411729-73411748 | Msa0184170:intron | 25.0% |
| ! | AGGATAAATACCAAACTAAA+AGG | + | chr1_4:73411742-73411761 | None:intergenic | 25.0% |
| !!! | AATTCATTCACGTACTTTTT+AGG | + | chr1_4:73411762-73411781 | None:intergenic | 25.0% |
| ! | TACTATAAATTCCAGTGATT+GGG | - | chr1_4:73411895-73411914 | Msa0184170:intron | 25.0% |
| ! | ATCACTTTAATGAACAAAGA+GGG | + | chr1_4:73412060-73412079 | None:intergenic | 25.0% |
| ! | TATCACTTTAATGAACAAAG+AGG | + | chr1_4:73412061-73412080 | None:intergenic | 25.0% |
| ! | ATGACAATATTGTAAACTAG+AGG | - | chr1_4:73412110-73412129 | Msa0184170:intron | 25.0% |
| ! | TTCACCTACTATTTCAATTA+CGG | - | chr1_4:73412550-73412569 | Msa0184170:intron | 25.0% |
| ! | TATACCGTAATTGAAATAGT+AGG | + | chr1_4:73412557-73412576 | None:intergenic | 25.0% |
| ! | ATCAAGAAAGATATATTCAC+CGG | + | chr1_4:73412678-73412697 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTTTGTGAAGAG+CGG | - | chr1_4:73412719-73412738 | Msa0184170:intron | 25.0% |
| !! | TTAAATTGAACAACTTTTGC+AGG | - | chr1_4:73412971-73412990 | Msa0184170:intron | 25.0% |
| ! | TAGCAATCTGTGTATATTTA+TGG | - | chr1_4:73413612-73413631 | Msa0184170:intron | 25.0% |
| ! | TGTTAAATTAATCAGAGGAA+AGG | + | chr1_4:73414079-73414098 | None:intergenic | 25.0% |
| ! | ATTTAAGGACATCAATAAAC+AGG | + | chr1_4:73414109-73414128 | None:intergenic | 25.0% |
| ! | ATTGATCAAACTATTCTTAC+AGG | - | chr1_4:73414177-73414196 | Msa0184170:CDS | 25.0% |
| ! | AAACTATTCTTACAGGTTAT+TGG | - | chr1_4:73414184-73414203 | Msa0184170:CDS | 25.0% |
| ! | TATAGAGTATATACCCTTAT+TGG | - | chr1_4:73414288-73414307 | Msa0184170:intron | 25.0% |
| ! | CACGTGTAAGAAATAAATTA+AGG | + | chr1_4:73414569-73414588 | None:intergenic | 25.0% |
| !! | CTTAATTTATTTCTTACACG+TGG | - | chr1_4:73414567-73414586 | Msa0184170:CDS | 25.0% |
| ! | TTCTTTGATCTCAATAAAGA+CGG | + | chr1_4:73414870-73414889 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAAGATTA+TGG | - | chr1_4:73415114-73415133 | Msa0184170:CDS | 25.0% |
| !! | TTCTTGATTGTATTTTGCAT+AGG | - | chr1_4:73416081-73416100 | Msa0184170:five_prime_UTR | 25.0% |
| ATTATTTACTGCTACTGCTA+TGG | + | chr1_4:73408116-73408135 | None:intergenic | 30.0% | |
| AGGAATTGAGATCTTGAATA+AGG | + | chr1_4:73408149-73408168 | None:intergenic | 30.0% | |
| !! | CTTCAAACTTTACTTTTGGT+TGG | - | chr1_4:73408544-73408563 | Msa0184170:intron | 30.0% |
| !! | TTTACTTTTGGTTGGAACTT+AGG | - | chr1_4:73408552-73408571 | Msa0184170:intron | 30.0% |
| !! | TTACTTTTGGTTGGAACTTA+GGG | - | chr1_4:73408553-73408572 | Msa0184170:intron | 30.0% |
| ACTAAACAATATGTCTATGG+CGG | - | chr1_4:73408639-73408658 | Msa0184170:CDS | 30.0% | |
| AAAATGATGATATCCAACTG+CGG | - | chr1_4:73408704-73408723 | Msa0184170:CDS | 30.0% | |
| CTACCTAAATTGTTTACTGT+TGG | - | chr1_4:73409112-73409131 | Msa0184170:intron | 30.0% | |
| !!! | CATAATTTTGTTGTTCAGTG+CGG | - | chr1_4:73409137-73409156 | Msa0184170:intron | 30.0% |
| TGGAGTTTGATTAATTGATC+TGG | - | chr1_4:73409240-73409259 | Msa0184170:intron | 30.0% | |
| GGAGTTTGATTAATTGATCT+GGG | - | chr1_4:73409241-73409260 | Msa0184170:intron | 30.0% | |
| AATATACAGTCAGTTATGTC+AGG | - | chr1_4:73409542-73409561 | Msa0184170:CDS | 30.0% | |
| TGTTGAGTATACTCATTTGA+AGG | - | chr1_4:73409623-73409642 | Msa0184170:intron | 30.0% | |
| GGGAGAAATTAACTATAACT+GGG | + | chr1_4:73409915-73409934 | None:intergenic | 30.0% | |
| TGGGAGAAATTAACTATAAC+TGG | + | chr1_4:73409916-73409935 | None:intergenic | 30.0% | |
| AGTTATAGTTAATTTCTCCC+AGG | - | chr1_4:73409915-73409934 | Msa0184170:intron | 30.0% | |
| ! | GGGATAAAATTACTTTGAAG+TGG | + | chr1_4:73410102-73410121 | None:intergenic | 30.0% |
| !! | GACACCATTTTAGTAGATAA+TGG | + | chr1_4:73410210-73410229 | None:intergenic | 30.0% |
| AGGTTACTGAAAATTTAAGG+TGG | + | chr1_4:73410466-73410485 | None:intergenic | 30.0% | |
| GTAAATTAATGAAGGAAGAG+AGG | + | chr1_4:73410562-73410581 | None:intergenic | 30.0% | |
| AATTAAAAAAAAGGGCAACC+CGG | - | chr1_4:73410759-73410778 | Msa0184170:intron | 30.0% | |
| ATTTGAGCCTATAATTATGC+GGG | + | chr1_4:73410797-73410816 | None:intergenic | 30.0% | |
| AAGTCAGAAAATAAGAAGAC+AGG | - | chr1_4:73410896-73410915 | Msa0184170:intron | 30.0% | |
| ! | TGTTCAAGTTTCTGTTTAAC+TGG | + | chr1_4:73410922-73410941 | None:intergenic | 30.0% |
| AAACTAAGAAAATTGGGGAA+GGG | - | chr1_4:73411116-73411135 | Msa0184170:intron | 30.0% | |
| AGTGATTGCAGTTAATATCA+TGG | + | chr1_4:73411186-73411205 | None:intergenic | 30.0% | |
| CACACACTATAGTAACATTA+TGG | + | chr1_4:73411270-73411289 | None:intergenic | 30.0% | |
| !!! | TTTTTTACTGATTTGCACAC+TGG | + | chr1_4:73411306-73411325 | None:intergenic | 30.0% |
| TTGCATAACTAAACAGTTCA+AGG | + | chr1_4:73411331-73411350 | None:intergenic | 30.0% | |
| TTGTCATTGGTAAATGTTTG+GGG | - | chr1_4:73411654-73411673 | Msa0184170:intron | 30.0% | |
| ACAATATCACAATTGACTGA+CGG | + | chr1_4:73411826-73411845 | None:intergenic | 30.0% | |
| GATATTGTACAACAAAGCAT+AGG | - | chr1_4:73411838-73411857 | Msa0184170:intron | 30.0% | |
| GTACTATAAATTCCAGTGAT+TGG | - | chr1_4:73411894-73411913 | Msa0184170:intron | 30.0% | |
| ACTATAAATTCCAGTGATTG+GGG | - | chr1_4:73411896-73411915 | Msa0184170:intron | 30.0% | |
| !! | TGAGTTCACTTTTCCTTATT+TGG | + | chr1_4:73412217-73412236 | None:intergenic | 30.0% |
| !!! | AAAAGGATCTTTTTAGGTGA+GGG | + | chr1_4:73412250-73412269 | None:intergenic | 30.0% |
| !!! | AAAAAGGATCTTTTTAGGTG+AGG | + | chr1_4:73412251-73412270 | None:intergenic | 30.0% |
| GAATCATGTCATTAATCGAA+AGG | + | chr1_4:73412424-73412443 | None:intergenic | 30.0% | |
| ! | TGACATGATTCATTTTATCC+TGG | - | chr1_4:73412433-73412452 | Msa0184170:intron | 30.0% |
| ! | GACATGATTCATTTTATCCT+GGG | - | chr1_4:73412434-73412453 | Msa0184170:intron | 30.0% |
| AAAATAATACCTGGTAGGTT+CGG | + | chr1_4:73412530-73412549 | None:intergenic | 30.0% | |
| GTGAAAAAATAATACCTGGT+AGG | + | chr1_4:73412535-73412554 | None:intergenic | 30.0% | |
| GTAGGTGAAAAAATAATACC+TGG | + | chr1_4:73412539-73412558 | None:intergenic | 30.0% | |
| TACATCATATAGCACTATGA+TGG | + | chr1_4:73412585-73412604 | None:intergenic | 30.0% | |
| TCAAGAAAGATATATTCACC+GGG | + | chr1_4:73412677-73412696 | None:intergenic | 30.0% | |
| ACTTAAAATCCGACAAAACT+TGG | + | chr1_4:73412820-73412839 | None:intergenic | 30.0% | |
| ! | GCATCTTTGAGAAAGAAATT+TGG | - | chr1_4:73412883-73412902 | Msa0184170:intron | 30.0% |
| AAAGAGAGCCTTCATATATA+TGG | + | chr1_4:73412926-73412945 | None:intergenic | 30.0% | |
| ATTTATACCTTTCCTAACAC+AGG | + | chr1_4:73413062-73413081 | None:intergenic | 30.0% | |
| TTAATGAGTTACATGGTGAA+AGG | + | chr1_4:73413192-73413211 | None:intergenic | 30.0% | |
| TTACGAGTTAATGAGTTACA+TGG | + | chr1_4:73413199-73413218 | None:intergenic | 30.0% | |
| CTAGTTGTATAGAGTTTCAA+TGG | + | chr1_4:73413313-73413332 | None:intergenic | 30.0% | |
| !! | ATATCCTGTGTCATTTCTAA+AGG | - | chr1_4:73413576-73413595 | Msa0184170:intron | 30.0% |
| ! | TGCTTAGTGTAGTTACTTTA+TGG | - | chr1_4:73413640-73413659 | Msa0184170:intron | 30.0% |
| ! | TTTATGGTATCTTTTGCTTC+TGG | - | chr1_4:73413656-73413675 | Msa0184170:intron | 30.0% |
| ! | TCAGAAAACAAATGCTTTTG+AGG | + | chr1_4:73413825-73413844 | None:intergenic | 30.0% |
| !! | AAGCATTTGTTTTCTGATCA+TGG | - | chr1_4:73413828-73413847 | Msa0184170:intron | 30.0% |
| ATTAATCAGAGGAAAGGAAA+AGG | + | chr1_4:73414073-73414092 | None:intergenic | 30.0% | |
| ! | TTTTGCTGAGTATATATGTG+TGG | + | chr1_4:73414139-73414158 | None:intergenic | 30.0% |
| !!! | TGGATTTTTTGACGACAAAT+TGG | - | chr1_4:73414327-73414346 | Msa0184170:intron | 30.0% |
| !!! | GGATTTTTTGACGACAAATT+GGG | - | chr1_4:73414328-73414347 | Msa0184170:intron | 30.0% |
| ! | TTGCTAGTAAGGTAGATTTT+GGG | - | chr1_4:73414401-73414420 | Msa0184170:intron | 30.0% |
| AATAGAATTATCTGCTTTCG+TGG | - | chr1_4:73414956-73414975 | Msa0184170:intron | 30.0% | |
| AGTTGAAGTCATGTACAAAA+AGG | - | chr1_4:73414996-73415015 | Msa0184170:intron | 30.0% | |
| !!! | ATAAACCATATTTTGGTCCA+AGG | + | chr1_4:73415102-73415121 | None:intergenic | 30.0% |
| GATACAAAGCACATATTTCA+AGG | + | chr1_4:73415265-73415284 | None:intergenic | 30.0% | |
| ATACATGTGAAGTTGCATTT+AGG | + | chr1_4:73415309-73415328 | None:intergenic | 30.0% | |
| ATGTATCATTTCGAACTGTA+TGG | - | chr1_4:73415323-73415342 | Msa0184170:CDS | 30.0% | |
| TTATGTTAATCCTTACCCTA+TGG | + | chr1_4:73415537-73415556 | None:intergenic | 30.0% | |
| GCTGGCATAGAAAAAAAAAA+AGG | + | chr1_4:73415706-73415725 | None:intergenic | 30.0% | |
| ACACAGACACATTTACATTA+TGG | + | chr1_4:73415883-73415902 | None:intergenic | 30.0% | |
| ! | CAATTGATGTGATTTAGTTC+TGG | - | chr1_4:73416022-73416041 | Msa0184170:five_prime_UTR | 30.0% |
| AGCAATTAATCGAAGAAGAG+AGG | - | chr1_4:73407929-73407948 | Msa0184170:three_prime_UTR | 35.0% | |
| TTAATCGAAGAAGAGAGGAA+AGG | - | chr1_4:73407934-73407953 | Msa0184170:three_prime_UTR | 35.0% | |
| CTTCTTCCTTTCTTCTTTGT+TGG | - | chr1_4:73408061-73408080 | Msa0184170:three_prime_UTR | 35.0% | |
| ATTTAGGTCGGTAAGTATGA+AGG | + | chr1_4:73408169-73408188 | None:intergenic | 35.0% | |
| TTGTTGAATTGCTGCGATTT+AGG | + | chr1_4:73408185-73408204 | None:intergenic | 35.0% | |
| ATGCAAGAGTTTAACAACGA+AGG | + | chr1_4:73408379-73408398 | None:intergenic | 35.0% | |
| ! | GAATAATGACGATGATGATG+AGG | - | chr1_4:73408813-73408832 | Msa0184170:intron | 35.0% |
| AATGAAAACTCCCAACTCTT+CGG | + | chr1_4:73408854-73408873 | None:intergenic | 35.0% | |
| ! | GGAGTTTTCATTCCTTATGT+TGG | - | chr1_4:73408862-73408881 | Msa0184170:intron | 35.0% |
| ! | GTTTTCATTCCTTATGTTGG+TGG | - | chr1_4:73408865-73408884 | Msa0184170:intron | 35.0% |
| TCGAATTGGATCTCAAATGA+GGG | - | chr1_4:73408981-73409000 | Msa0184170:intron | 35.0% | |
| ATAAACGGACCTTCACTAAT+GGG | + | chr1_4:73409032-73409051 | None:intergenic | 35.0% | |
| TATAAACGGACCTTCACTAA+TGG | + | chr1_4:73409033-73409052 | None:intergenic | 35.0% | |
| GAGCCAACAGTAAACAATTT+AGG | + | chr1_4:73409118-73409137 | None:intergenic | 35.0% | |
| TATAACAAATGGGAACTACG+AGG | + | chr1_4:73409373-73409392 | None:intergenic | 35.0% | |
| !! | AATCTCTGAAACAGATGTCT+TGG | + | chr1_4:73409423-73409442 | None:intergenic | 35.0% |
| AAGACATCTGTTTCAGAGAT+TGG | - | chr1_4:73409422-73409441 | Msa0184170:intron | 35.0% | |
| TTTGACGATCTTACTCAAGA+TGG | - | chr1_4:73409663-73409682 | Msa0184170:intron | 35.0% | |
| TCAAGATTCTGTCAGATTGT+TGG | - | chr1_4:73409825-73409844 | Msa0184170:CDS | 35.0% | |
| ATATGTGCAACACAATCTTG+TGG | + | chr1_4:73409889-73409908 | None:intergenic | 35.0% | |
| AATTTCTCCCAGGTACATAT+AGG | - | chr1_4:73409925-73409944 | Msa0184170:intron | 35.0% | |
| ATCAACTCCTATATGTACCT+GGG | + | chr1_4:73409935-73409954 | None:intergenic | 35.0% | |
| TATCAACTCCTATATGTACC+TGG | + | chr1_4:73409936-73409955 | None:intergenic | 35.0% | |
| ATTAGAATGGGAAGATCTCT+AGG | + | chr1_4:73410049-73410068 | None:intergenic | 35.0% | |
| GTGTCTAGTGAATTTCCTTT+GGG | - | chr1_4:73410225-73410244 | Msa0184170:intron | 35.0% | |
| AATGGACAAAAATCACCCAA+AGG | + | chr1_4:73410243-73410262 | None:intergenic | 35.0% | |
| TTTGTCCATTCTGAACTAGA+AGG | - | chr1_4:73410253-73410272 | Msa0184170:intron | 35.0% | |
| !! | TTTCTCCTTCTAGTTCAGAA+TGG | + | chr1_4:73410261-73410280 | None:intergenic | 35.0% |
| ATTGCACTATGCTTACAGAT+AGG | - | chr1_4:73410281-73410300 | Msa0184170:intron | 35.0% | |
| AACAGAAACTTGAACATGTG+TGG | - | chr1_4:73410926-73410945 | Msa0184170:intron | 35.0% | |
| TTCCTCAGAAGATGCAATAT+CGG | + | chr1_4:73411023-73411042 | None:intergenic | 35.0% | |
| GAAACTAAGAAAATTGGGGA+AGG | - | chr1_4:73411115-73411134 | Msa0184170:intron | 35.0% | |
| !! | TATGGTGTCACATTACTATC+AGG | + | chr1_4:73411252-73411271 | None:intergenic | 35.0% |
| !! | GTGTGAAGTGTTTTTGTCAT+TGG | - | chr1_4:73411641-73411660 | Msa0184170:intron | 35.0% |
| AAAGAACCAAGTGCATGTTT+GGG | + | chr1_4:73412299-73412318 | None:intergenic | 35.0% | |
| AAATAATACCTGGTAGGTTC+GGG | + | chr1_4:73412529-73412548 | None:intergenic | 35.0% | |
| !! | ATGAAGGCTCTCTTTTGTTT+TGG | - | chr1_4:73412931-73412950 | Msa0184170:intron | 35.0% |
| TGGAAAGTGAGGACTTTAAA+GGG | + | chr1_4:73413420-73413439 | None:intergenic | 35.0% | |
| TAAGATATTTCCCTTGTTGC+AGG | + | chr1_4:73413455-73413474 | None:intergenic | 35.0% | |
| ! | CTTGGTTTAAAGCAGTGTTT+AGG | - | chr1_4:73413484-73413503 | Msa0184170:intron | 35.0% |
| TTAGGTCTTCTAAACTAGCA+AGG | - | chr1_4:73413502-73413521 | Msa0184170:intron | 35.0% | |
| CACAGATTGCTAAGAAAGAA+AGG | + | chr1_4:73413604-73413623 | None:intergenic | 35.0% | |
| !!! | TTTGTGCCACTAGTTTTTCA+CGG | - | chr1_4:73413744-73413763 | Msa0184170:intron | 35.0% |
| GAAAATCCGTGAAAAACTAG+TGG | + | chr1_4:73413753-73413772 | None:intergenic | 35.0% | |
| TTCTACCTTATCTTCAATGC+AGG | - | chr1_4:73413885-73413904 | Msa0184170:intron | 35.0% | |
| TTCAGAAGGGATAGGAAAAT+AGG | + | chr1_4:73413934-73413953 | None:intergenic | 35.0% | |
| ! | TATTTTCCTATCCCTTCTGA+AGG | - | chr1_4:73413933-73413952 | Msa0184170:intron | 35.0% |
| AGGAAATTCATCCTTCAGAA+GGG | + | chr1_4:73413947-73413966 | None:intergenic | 35.0% | |
| !!! | ATCAGGTTGTTCTAGTTTTC+TGG | - | chr1_4:73414007-73414026 | Msa0184170:intron | 35.0% |
| CTGCGTGTTAAATTAATCAG+AGG | + | chr1_4:73414084-73414103 | None:intergenic | 35.0% | |
| TCTTCACTTTCTTGCTAGTA+AGG | - | chr1_4:73414390-73414409 | Msa0184170:intron | 35.0% | |
| ! | CTTGCTAGTAAGGTAGATTT+TGG | - | chr1_4:73414400-73414419 | Msa0184170:intron | 35.0% |
| TAAGGTAATAGATGAACCTG+AGG | + | chr1_4:73414551-73414570 | None:intergenic | 35.0% | |
| ! | TGTATGCTTTTATCTTCCGT+CGG | - | chr1_4:73414628-73414647 | Msa0184170:CDS | 35.0% |
| AAATGAATTAACGAACCTGC+TGG | - | chr1_4:73414752-73414771 | Msa0184170:intron | 35.0% | |
| ATAAAGACGGCAGAAAAAAG+TGG | + | chr1_4:73414857-73414876 | None:intergenic | 35.0% | |
| ! | TTTTCGACTGCAGCTAAATT+AGG | - | chr1_4:73415047-73415066 | Msa0184170:CDS | 35.0% |
| GCAGCTAAATTAGGAAATAC+AGG | - | chr1_4:73415056-73415075 | Msa0184170:CDS | 35.0% | |
| CCAATCCACACTATTTGTAT+CGG | - | chr1_4:73415367-73415386 | Msa0184170:CDS | 35.0% | |
| TTGTTCAAGCTTCTAACTCA+TGG | - | chr1_4:73415557-73415576 | Msa0184170:intron | 35.0% | |
| TTTATGTTGGGAACTCTACA+CGG | + | chr1_4:73415593-73415612 | None:intergenic | 35.0% | |
| AAAGCAAGATACTTACAGAC+TGG | + | chr1_4:73415661-73415680 | None:intergenic | 35.0% | |
| GCTGTTCAGTTATAGCTAAA+TGG | - | chr1_4:73415974-73415993 | Msa0184170:five_prime_UTR | 35.0% | |
| AGGACAATGAACAAAGATGA+TGG | + | chr1_4:73416120-73416139 | None:intergenic | 35.0% | |
| !! | ATGCAATGCATTCTAGAACA+AGG | + | chr1_4:73416140-73416159 | None:intergenic | 35.0% |
| GAGAGGAAAGGAAACAAAGT+TGG | - | chr1_4:73407946-73407965 | Msa0184170:three_prime_UTR | 40.0% | |
| CACACACCAACAAAGAAGAA+AGG | + | chr1_4:73408070-73408089 | None:intergenic | 40.0% | |
| TCTTTGTTGGTGTGTGTGTT+AGG | - | chr1_4:73408074-73408093 | Msa0184170:three_prime_UTR | 40.0% | |
| CTTTGTTGGTGTGTGTGTTA+GGG | - | chr1_4:73408075-73408094 | Msa0184170:three_prime_UTR | 40.0% | |
| TTACTGCTACTGCTATGGAT+GGG | + | chr1_4:73408111-73408130 | None:intergenic | 40.0% | |
| TTTACTGCTACTGCTATGGA+TGG | + | chr1_4:73408112-73408131 | None:intergenic | 40.0% | |
| TGAATTGCTGCGATTTAGGT+CGG | + | chr1_4:73408181-73408200 | None:intergenic | 40.0% | |
| AATTCAACAACACTTTCGCG+AGG | - | chr1_4:73408195-73408214 | Msa0184170:exon | 40.0% | |
| TTTGAGCTCGTCTATAAGCA+CGG | + | chr1_4:73408686-73408705 | None:intergenic | 40.0% | |
| ! | TGATGAGGTACTTCTTGCAA+TGG | - | chr1_4:73408828-73408847 | Msa0184170:intron | 40.0% |
| GTCGAATTGGATCTCAAATG+AGG | - | chr1_4:73408980-73408999 | Msa0184170:intron | 40.0% | |
| TCAAATGAGGGAGAGTGATT+TGG | - | chr1_4:73408993-73409012 | Msa0184170:intron | 40.0% | |
| GGTGTCTAGTGAATTTCCTT+TGG | - | chr1_4:73410224-73410243 | Msa0184170:intron | 40.0% | |
| TATCCACTTTCCGCTTATAG+TGG | + | chr1_4:73410644-73410663 | None:intergenic | 40.0% | |
| ATAAGCGGAAAGTGGATAGT+AGG | - | chr1_4:73410646-73410665 | Msa0184170:intron | 40.0% | |
| TAAGCGGAAAGTGGATAGTA+GGG | - | chr1_4:73410647-73410666 | Msa0184170:intron | 40.0% | |
| TAGAGCTCCCGCATAATTAT+AGG | - | chr1_4:73410787-73410806 | Msa0184170:intron | 40.0% | |
| CATGTGTGGATAAACAGATC+TGG | - | chr1_4:73410940-73410959 | Msa0184170:intron | 40.0% | |
| TTCCAAAACCTGGGATTATC+TGG | + | chr1_4:73410974-73410993 | None:intergenic | 40.0% | |
| TACCGATATTGCATCTTCTG+AGG | - | chr1_4:73411018-73411037 | Msa0184170:CDS | 40.0% | |
| ! | GATATTGCATCTTCTGAGGA+AGG | - | chr1_4:73411022-73411041 | Msa0184170:CDS | 40.0% |
| TGACATGATGAAGACCATGT+AGG | - | chr1_4:73411214-73411233 | Msa0184170:CDS | 40.0% | |
| TCATTGGTAAATGTTTGGGG+TGG | - | chr1_4:73411657-73411676 | Msa0184170:intron | 40.0% | |
| ! | CATTGGTAAATGTTTGGGGT+GGG | - | chr1_4:73411658-73411677 | Msa0184170:intron | 40.0% |
| TAAATTCCAGTGATTGGGGT+AGG | - | chr1_4:73411900-73411919 | Msa0184170:intron | 40.0% | |
| AAATTCCAGTGATTGGGGTA+GGG | - | chr1_4:73411901-73411920 | Msa0184170:intron | 40.0% | |
| CAAAGAACCAAGTGCATGTT+TGG | + | chr1_4:73412300-73412319 | None:intergenic | 40.0% | |
| ! | CAAACATGCACTTGGTTCTT+TGG | - | chr1_4:73412298-73412317 | Msa0184170:intron | 40.0% |
| ! | TGATTCATTTTATCCTGGGC+AGG | - | chr1_4:73412438-73412457 | Msa0184170:intron | 40.0% |
| AATAATACCTGGTAGGTTCG+GGG | + | chr1_4:73412528-73412547 | None:intergenic | 40.0% | |
| GATATATTCACCGGGCTTTA+GGG | + | chr1_4:73412669-73412688 | None:intergenic | 40.0% | |
| AGATATATTCACCGGGCTTT+AGG | + | chr1_4:73412670-73412689 | None:intergenic | 40.0% | |
| TTGTTTGTGAAGAGCGGAAT+TGG | - | chr1_4:73412725-73412744 | Msa0184170:intron | 40.0% | |
| GAAGCAATCGAACATATGCA+GGG | + | chr1_4:73412752-73412771 | None:intergenic | 40.0% | |
| TCGATTGCTTCGAGATAATG+AGG | - | chr1_4:73412761-73412780 | Msa0184170:intron | 40.0% | |
| !! | GGAAAGTGACCAAGTTTTGT+CGG | - | chr1_4:73412808-73412827 | Msa0184170:intron | 40.0% |
| ATATGCTGAATCGCAAGATC+TGG | + | chr1_4:73412843-73412862 | None:intergenic | 40.0% | |
| GCATATTCTTCCTTGTGTGA+AGG | - | chr1_4:73412857-73412876 | Msa0184170:intron | 40.0% | |
| !! | TGCACTGGCTTCAGTAATAA+TGG | - | chr1_4:73413028-73413047 | Msa0184170:intron | 40.0% |
| !! | GCACTGGCTTCAGTAATAAT+GGG | - | chr1_4:73413029-73413048 | Msa0184170:intron | 40.0% |
| ! | GGCTTCAGTAATAATGGGAA+TGG | - | chr1_4:73413034-73413053 | Msa0184170:intron | 40.0% |
| GTGTTTGCAGTATCCATATC+AGG | - | chr1_4:73413120-73413139 | Msa0184170:intron | 40.0% | |
| TTGCAGTATCCATATCAGGA+AGG | - | chr1_4:73413124-73413143 | Msa0184170:intron | 40.0% | |
| CAGATTTCACCTTCCTGATA+TGG | + | chr1_4:73413136-73413155 | None:intergenic | 40.0% | |
| AGGAAGGTGAAATCTGTTGT+TGG | - | chr1_4:73413140-73413159 | Msa0184170:intron | 40.0% | |
| GGAAGGTGAAATCTGTTGTT+GGG | - | chr1_4:73413141-73413160 | Msa0184170:intron | 40.0% | |
| GAAGGTGAAATCTGTTGTTG+GGG | - | chr1_4:73413142-73413161 | Msa0184170:intron | 40.0% | |
| AAGGTGAAATCTGTTGTTGG+GGG | - | chr1_4:73413143-73413162 | Msa0184170:intron | 40.0% | |
| TATGTCTTTCGCAAGTCAGA+AGG | - | chr1_4:73413342-73413361 | Msa0184170:intron | 40.0% | |
| ATGTCTTTCGCAAGTCAGAA+GGG | - | chr1_4:73413343-73413362 | Msa0184170:intron | 40.0% | |
| ! | GGAAAGTGAGGACTTTAAAG+GGG | + | chr1_4:73413419-73413438 | None:intergenic | 40.0% |
| GTGGAAAGTGAGGACTTTAA+AGG | + | chr1_4:73413421-73413440 | None:intergenic | 40.0% | |
| ! | GGAACCTTTAGAAATGACAC+AGG | + | chr1_4:73413583-73413602 | None:intergenic | 40.0% |
| AGCACTTTATTGCACAAACG+AGG | + | chr1_4:73413800-73413819 | None:intergenic | 40.0% | |
| TGCTTCCTGCATTGAAGATA+AGG | + | chr1_4:73413893-73413912 | None:intergenic | 40.0% | |
| ATTCATCCTTCAGAAGGGAT+AGG | + | chr1_4:73413942-73413961 | None:intergenic | 40.0% | |
| CAGGAAATTCATCCTTCAGA+AGG | + | chr1_4:73413948-73413967 | None:intergenic | 40.0% | |
| !! | CAAGCTTGCTGATGATGTTT+AGG | + | chr1_4:73413978-73413997 | None:intergenic | 40.0% |
| CAAGCTTGATCAAGTGAATC+AGG | - | chr1_4:73413990-73414009 | Msa0184170:intron | 40.0% | |
| ATGTGTGGCATGCAGATTTA+AGG | + | chr1_4:73414124-73414143 | None:intergenic | 40.0% | |
| !! | CCTAACTGACTTGCCAATAA+GGG | + | chr1_4:73414304-73414323 | None:intergenic | 40.0% |
| CCTTATTGGCAAGTCAGTTA+GGG | - | chr1_4:73414302-73414321 | Msa0184170:intron | 40.0% | |
| CTTATTGGCAAGTCAGTTAG+GGG | - | chr1_4:73414303-73414322 | Msa0184170:intron | 40.0% | |
| AAACGTCTAGCTGAAGAGTT+TGG | - | chr1_4:73414497-73414516 | Msa0184170:CDS | 40.0% | |
| !! | AATTAGAAGTGTCCTTCCGA+CGG | + | chr1_4:73414647-73414666 | None:intergenic | 40.0% |
| TTCAGCCTTGGACCAAAATA+TGG | - | chr1_4:73415094-73415113 | Msa0184170:CDS | 40.0% | |
| CATTTCGAACTGTATGGAAC+AGG | - | chr1_4:73415329-73415348 | Msa0184170:CDS | 40.0% | |
| CCGATACAAATAGTGTGGAT+TGG | + | chr1_4:73415370-73415389 | None:intergenic | 40.0% | |
| GTCATCCGATACAAATAGTG+TGG | + | chr1_4:73415375-73415394 | None:intergenic | 40.0% | |
| TTGTTGCAGCATCAAAAGAC+AGG | - | chr1_4:73415469-73415488 | Msa0184170:intron | 40.0% | |
| TTATGTTGGGAACTCTACAC+GGG | + | chr1_4:73415592-73415611 | None:intergenic | 40.0% | |
| TCCCAACATAAAGTTCAACG+TGG | - | chr1_4:73415601-73415620 | Msa0184170:intron | 40.0% | |
| GCCACGTTGAACTTTATGTT+GGG | + | chr1_4:73415605-73415624 | None:intergenic | 40.0% | |
| TGCCACGTTGAACTTTATGT+TGG | + | chr1_4:73415606-73415625 | None:intergenic | 40.0% | |
| CATAAAGTTCAACGTGGCAA+AGG | - | chr1_4:73415607-73415626 | Msa0184170:intron | 40.0% | |
| ! | TGTCTTTTCTACCACCTGAA+TGG | + | chr1_4:73415754-73415773 | None:intergenic | 40.0% |
| AAAAATCGCACGTCAACATC+AGG | + | chr1_4:73415810-73415829 | None:intergenic | 40.0% | |
| ! | TCACATTGATGACTTCAGCA+AGG | - | chr1_4:73415902-73415921 | Msa0184170:five_prime_UTR | 40.0% |
| TCGTCTATAAGCACGGCTAT+GGG | + | chr1_4:73408679-73408698 | None:intergenic | 45.0% | |
| GAATTGAGTTCAACCGCAGT+TGG | + | chr1_4:73408720-73408739 | None:intergenic | 45.0% | |
| TGCGGTTGAACTCAATTCGT+AGG | - | chr1_4:73408722-73408741 | Msa0184170:intron | 45.0% | |
| TGTTCGACTCCACCAACATA+AGG | + | chr1_4:73408877-73408896 | None:intergenic | 45.0% | |
| TGCAAAAAGCCTCCAAAGGT+GGG | + | chr1_4:73408915-73408934 | None:intergenic | 45.0% | |
| ACACTGCAAAAAGCCTCCAA+AGG | + | chr1_4:73408919-73408938 | None:intergenic | 45.0% | |
| ! | GTGGAGTCACTTTGTCGAAT+TGG | - | chr1_4:73408967-73408986 | Msa0184170:intron | 45.0% |
| ATAGACCACATGCAGAGACT+CGG | + | chr1_4:73409470-73409489 | None:intergenic | 45.0% | |
| GTGCACTAGGGTAAGCAATA+TGG | + | chr1_4:73409494-73409513 | None:intergenic | 45.0% | |
| TTGATGCTTCTGGTGCACTA+GGG | + | chr1_4:73409506-73409525 | None:intergenic | 45.0% | |
| TTTGATGCTTCTGGTGCACT+AGG | + | chr1_4:73409507-73409526 | None:intergenic | 45.0% | |
| !! | TGCACCAGAAGCATCAAAGA+CGG | - | chr1_4:73409509-73409528 | Msa0184170:intron | 45.0% |
| AACTCCGTCTTTGATGCTTC+TGG | + | chr1_4:73409516-73409535 | None:intergenic | 45.0% | |
| ATGTCAGGATGACATGCCTA+TGG | - | chr1_4:73409557-73409576 | Msa0184170:CDS | 45.0% | |
| GCAGCAGATCTTCTAACCAT+AGG | + | chr1_4:73409576-73409595 | None:intergenic | 45.0% | |
| AGATCTGCTGCGACAAATCT+TGG | - | chr1_4:73409585-73409604 | Msa0184170:CDS | 45.0% | |
| GATCTGCTGCGACAAATCTT+GGG | - | chr1_4:73409586-73409605 | Msa0184170:CDS | 45.0% | |
| ! | TTCTGTCAGATTGTTGGCTG+TGG | - | chr1_4:73409831-73409850 | Msa0184170:CDS | 45.0% |
| TGCTGCTCTTGGAAAACTGT+TGG | - | chr1_4:73409861-73409880 | Msa0184170:CDS | 45.0% | |
| AGCCAACCCAAAGCACAATT+CGG | - | chr1_4:73410349-73410368 | Msa0184170:intron | 45.0% | |
| CCAAAGCCGAATTGTGCTTT+GGG | + | chr1_4:73410358-73410377 | None:intergenic | 45.0% | |
| TCCAAAGCCGAATTGTGCTT+TGG | + | chr1_4:73410359-73410378 | None:intergenic | 45.0% | |
| GACAGCATATCAGCATGGAA+CGG | - | chr1_4:73410606-73410625 | Msa0184170:intron | 45.0% | |
| AATCCCGGAACCACTATAAG+CGG | - | chr1_4:73410631-73410650 | Msa0184170:intron | 45.0% | |
| TTTCCGCTTATAGTGGTTCC+GGG | + | chr1_4:73410637-73410656 | None:intergenic | 45.0% | |
| CTTTCCGCTTATAGTGGTTC+CGG | + | chr1_4:73410638-73410657 | None:intergenic | 45.0% | |
| GAACCACTATAAGCGGAAAG+TGG | - | chr1_4:73410638-73410657 | Msa0184170:intron | 45.0% | |
| GTGGATAAACAGATCTGGAG+AGG | - | chr1_4:73410945-73410964 | Msa0184170:intron | 45.0% | |
| ! | TGCCAGATAATCCCAGGTTT+TGG | - | chr1_4:73410969-73410988 | Msa0184170:intron | 45.0% |
| CGAGCATTCTTCCAAAACCT+GGG | + | chr1_4:73410983-73411002 | None:intergenic | 45.0% | |
| ACGAGCATTCTTCCAAAACC+TGG | + | chr1_4:73410984-73411003 | None:intergenic | 45.0% | |
| ! | ATTGCATCTTCTGAGGAAGG+AGG | - | chr1_4:73411025-73411044 | Msa0184170:CDS | 45.0% |
| ATGGAAAATCTTGGCCCCAA+TGG | + | chr1_4:73411167-73411186 | None:intergenic | 45.0% | |
| ! | GGTGTCACATTACTATCAGG+TGG | + | chr1_4:73411249-73411268 | None:intergenic | 45.0% |
| ! | TAAATGTTTGGGGTGGGAGT+AGG | - | chr1_4:73411664-73411683 | Msa0184170:intron | 45.0% |
| AGGAGGGAGGAGAATATGAA+AGG | - | chr1_4:73411684-73411703 | Msa0184170:intron | 45.0% | |
| TATATCCCTACCCCAATCAC+TGG | + | chr1_4:73411909-73411928 | None:intergenic | 45.0% | |
| CAAGTGCATGTTTGGGAGTT+AGG | + | chr1_4:73412292-73412311 | None:intergenic | 45.0% | |
| CTAACTCCCAAACATGCACT+TGG | - | chr1_4:73412290-73412309 | Msa0184170:intron | 45.0% | |
| TATGAGCTCTGTGAAGCTGT+AGG | - | chr1_4:73412502-73412521 | Msa0184170:intron | 45.0% | |
| TGTGAGCTGAGTTCACTAGT+TGG | - | chr1_4:73412608-73412627 | Msa0184170:intron | 45.0% | |
| GTGAGCTGAGTTCACTAGTT+GGG | - | chr1_4:73412609-73412628 | Msa0184170:intron | 45.0% | |
| CGAAGCAATCGAACATATGC+AGG | + | chr1_4:73412753-73412772 | None:intergenic | 45.0% | |
| AAGATGCACACCTTCACACA+AGG | + | chr1_4:73412870-73412889 | None:intergenic | 45.0% | |
| TTACTGAAGCCAGTGCAGAA+CGG | + | chr1_4:73413025-73413044 | None:intergenic | 45.0% | |
| AATGGCTCCTGTGTTAGGAA+AGG | - | chr1_4:73413052-73413071 | Msa0184170:intron | 45.0% | |
| GTCTACACAACACAAGCAGA+TGG | + | chr1_4:73413291-73413310 | None:intergenic | 45.0% | |
| ! | GAAGGGCATATGTCATACTG+CGG | - | chr1_4:73413360-73413379 | Msa0184170:intron | 45.0% |
| TATTTCCCTTGTTGCAGGCT+GGG | + | chr1_4:73413450-73413469 | None:intergenic | 45.0% | |
| ATATTTCCCTTGTTGCAGGC+TGG | + | chr1_4:73413451-73413470 | None:intergenic | 45.0% | |
| !!! | CTTTTGCTTCTGGCTTTTGC+TGG | - | chr1_4:73413666-73413685 | Msa0184170:intron | 45.0% |
| !! | AGGATAGGCATTGGAGAGTT+CGG | - | chr1_4:73414257-73414276 | Msa0184170:intron | 45.0% |
| CCCTTATTGGCAAGTCAGTT+AGG | - | chr1_4:73414301-73414320 | Msa0184170:intron | 45.0% | |
| !! | CCCTAACTGACTTGCCAATA+AGG | + | chr1_4:73414305-73414324 | None:intergenic | 45.0% |
| TGAAGAGTTTGGTCCTGAGT+GGG | - | chr1_4:73414508-73414527 | Msa0184170:CDS | 45.0% | |
| TATGCAGCACATCATTCCTC+AGG | - | chr1_4:73414532-73414551 | Msa0184170:CDS | 45.0% | |
| ! | TGCTTTTATCTTCCGTCGGA+AGG | - | chr1_4:73414632-73414651 | Msa0184170:intron | 45.0% |
| CATTCCAGTTGAAAACCAGC+AGG | + | chr1_4:73414770-73414789 | None:intergenic | 45.0% | |
| TGTTGCACATGAGCAATCGT+TGG | - | chr1_4:73414802-73414821 | Msa0184170:intron | 45.0% | |
| ACATGAGCAATCGTTGGAAG+TGG | - | chr1_4:73414808-73414827 | Msa0184170:intron | 45.0% | |
| CAATCGTTGGAAGTGGAGTA+GGG | - | chr1_4:73414815-73414834 | Msa0184170:intron | 45.0% | |
| AATCGTTGGAAGTGGAGTAG+GGG | - | chr1_4:73414816-73414835 | Msa0184170:intron | 45.0% | |
| AAGAAACCTGCATTCGCTCT+TGG | - | chr1_4:73414885-73414904 | Msa0184170:intron | 45.0% | |
| AACAAACCAAGAGCGAATGC+AGG | + | chr1_4:73414894-73414913 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1_4:73415163-73415182 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1_4:73415164-73415183 | None:intergenic | 45.0% |
| TAATACAGCGAGTCCTCGAA+GGG | + | chr1_4:73415238-73415257 | None:intergenic | 45.0% | |
| ATAATACAGCGAGTCCTCGA+AGG | + | chr1_4:73415239-73415258 | None:intergenic | 45.0% | |
| GAACTGTATGGAACAGGTTC+TGG | - | chr1_4:73415335-73415354 | Msa0184170:CDS | 45.0% | |
| TGACTTCAGAGCCCATTACA+GGG | + | chr1_4:73415425-73415444 | None:intergenic | 45.0% | |
| TTTGATGCTGCAACAACAGC+AGG | + | chr1_4:73415465-73415484 | None:intergenic | 45.0% | |
| ATCCTTACCCTATGGTGCAA+TGG | + | chr1_4:73415529-73415548 | None:intergenic | 45.0% | |
| GAATGGCAATGGTGTTCACA+GGG | + | chr1_4:73415737-73415756 | None:intergenic | 45.0% | |
| TGAATGGCAATGGTGTTCAC+AGG | + | chr1_4:73415738-73415757 | None:intergenic | 45.0% | |
| TGTGAACACCATTGCCATTC+AGG | - | chr1_4:73415737-73415756 | Msa0184170:intron | 45.0% | |
| TTCTACCACCTGAATGGCAA+TGG | + | chr1_4:73415748-73415767 | None:intergenic | 45.0% | |
| AAAGACAATCCGACCATGTC+TGG | - | chr1_4:73415767-73415786 | Msa0184170:intron | 45.0% | |
| ! | TTTTTCCAACCAAGCCTTGC+AGG | - | chr1_4:73415827-73415846 | Msa0184170:intron | 45.0% |
| GACATGATCAATTGCCTGCA+AGG | + | chr1_4:73415844-73415863 | None:intergenic | 45.0% | |
| !! | TAAAAAAAAAACATTATTAT+AGG | - | chr1_4:73410732-73410751 | Msa0184170:intron | 5.0% |
| AGTTGGTTACACACGTGCCA+CGG | - | chr1_4:73407963-73407982 | Msa0184170:three_prime_UTR | 50.0% | |
| TTTACTTTCACCGTTGCCCG+TGG | + | chr1_4:73407983-73408002 | None:intergenic | 50.0% | |
| AGCACGGCTATGGGATAAAG+TGG | + | chr1_4:73408670-73408689 | None:intergenic | 50.0% | |
| CTCGTCTATAAGCACGGCTA+TGG | + | chr1_4:73408680-73408699 | None:intergenic | 50.0% | |
| TCTTGCAATGGCCGAAGAGT+TGG | - | chr1_4:73408840-73408859 | Msa0184170:intron | 50.0% | |
| CTTGCAATGGCCGAAGAGTT+GGG | - | chr1_4:73408841-73408860 | Msa0184170:intron | 50.0% | |
| ! | TAGTGTGTTGCTCCCACCTT+TGG | - | chr1_4:73408900-73408919 | Msa0184170:intron | 50.0% |
| CTGCAAAAAGCCTCCAAAGG+TGG | + | chr1_4:73408916-73408935 | None:intergenic | 50.0% | |
| ! | GGAGGCTTTTTGCAGTGTTG+AGG | - | chr1_4:73408921-73408940 | Msa0184170:intron | 50.0% |
| TGTTGAGGAAACCTGCGTGA+GGG | - | chr1_4:73408936-73408955 | Msa0184170:intron | 50.0% | |
| CTGTTTCAGAGATTGGCAGC+AGG | - | chr1_4:73409429-73409448 | Msa0184170:intron | 50.0% | |
| AGAGATTGGCAGCAGGTGAA+TGG | - | chr1_4:73409436-73409455 | Msa0184170:intron | 50.0% | |
| TAGACCACATGCAGAGACTC+GGG | + | chr1_4:73409469-73409488 | None:intergenic | 50.0% | |
| ! | TGTCAGATTGTTGGCTGTGG+AGG | - | chr1_4:73409834-73409853 | Msa0184170:CDS | 50.0% |
| ! | GTCAGATTGTTGGCTGTGGA+GGG | - | chr1_4:73409835-73409854 | Msa0184170:CDS | 50.0% |
| ! | AGCCGAATTGTGCTTTGGGT+TGG | + | chr1_4:73410354-73410373 | None:intergenic | 50.0% |
| CCCAAAGCACAATTCGGCTT+TGG | - | chr1_4:73410355-73410374 | Msa0184170:intron | 50.0% | |
| ! | TCTGGGACAGCATATCAGCA+TGG | - | chr1_4:73410601-73410620 | Msa0184170:intron | 50.0% |
| GCTTATAGTGGTTCCGGGAT+TGG | + | chr1_4:73410632-73410651 | None:intergenic | 50.0% | |
| AGAGGATGCCAGATAATCCC+AGG | - | chr1_4:73410963-73410982 | Msa0184170:intron | 50.0% | |
| TGTCCATGCGTTCGTACCAT+TGG | - | chr1_4:73411148-73411167 | Msa0184170:intron | 50.0% | |
| GTCCATGCGTTCGTACCATT+GGG | - | chr1_4:73411149-73411168 | Msa0184170:intron | 50.0% | |
| TCCATGCGTTCGTACCATTG+GGG | - | chr1_4:73411150-73411169 | Msa0184170:intron | 50.0% | |
| ATCCTGGGCAGGATAAGTCT+TGG | - | chr1_4:73412449-73412468 | Msa0184170:intron | 50.0% | |
| !! | ATTCACCGGGCTTTAGGGTT+GGG | + | chr1_4:73412664-73412683 | None:intergenic | 50.0% |
| !! | TATTCACCGGGCTTTAGGGT+TGG | + | chr1_4:73412665-73412684 | None:intergenic | 50.0% |
| GCTTCGAGATAATGAGGCTG+AGG | - | chr1_4:73412767-73412786 | Msa0184170:intron | 50.0% | |
| ATGGGAATGGCTCCTGTGTT+AGG | - | chr1_4:73413047-73413066 | Msa0184170:intron | 50.0% | |
| ATGATGTTTAGGCGCACGTC+AGG | + | chr1_4:73413967-73413986 | None:intergenic | 50.0% | |
| ACCAGCCATTGTTGAGCTTG+CGG | - | chr1_4:73414234-73414253 | Msa0184170:CDS | 50.0% | |
| ATCCTCCGCAAGCTCAACAA+TGG | + | chr1_4:73414242-73414261 | None:intergenic | 50.0% | |
| TTGTTGAGCTTGCGGAGGAT+AGG | - | chr1_4:73414242-73414261 | Msa0184170:CDS | 50.0% | |
| TTGGCAAGTCAGTTAGGGGT+TGG | - | chr1_4:73414307-73414326 | Msa0184170:intron | 50.0% | |
| TCTTTGCATGCAGTGGCTAC+AGG | - | chr1_4:73414354-73414373 | Msa0184170:intron | 50.0% | |
| CATGCAGTGGCTACAGGATA+AGG | - | chr1_4:73414360-73414379 | Msa0184170:intron | 50.0% | |
| CTGAAGAGTTTGGTCCTGAG+TGG | - | chr1_4:73414507-73414526 | Msa0184170:CDS | 50.0% | |
| !!! | CGAACCTGCTGGTTTTCAAC+TGG | - | chr1_4:73414763-73414782 | Msa0184170:intron | 50.0% |
| GCAATCGTTGGAAGTGGAGT+AGG | - | chr1_4:73414814-73414833 | Msa0184170:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1_4:73415159-73415178 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1_4:73415165-73415184 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1_4:73415162-73415181 | Msa0184170:CDS | 50.0% | |
| CAGGGAGATAGCACGAAGAA+TGG | + | chr1_4:73415397-73415416 | None:intergenic | 50.0% | |
| GACTTCAGAGCCCATTACAG+GGG | + | chr1_4:73415424-73415443 | None:intergenic | 50.0% | |
| GTGACTTCAGAGCCCATTAC+AGG | + | chr1_4:73415426-73415445 | None:intergenic | 50.0% | |
| CCCTATGGTGCAATGGCATA+GGG | + | chr1_4:73415522-73415541 | None:intergenic | 50.0% | |
| CCCTATGCCATTGCACCATA+GGG | - | chr1_4:73415519-73415538 | Msa0184170:intron | 50.0% | |
| ACCCTATGGTGCAATGGCAT+AGG | + | chr1_4:73415523-73415542 | None:intergenic | 50.0% | |
| TGCCATTGCACCATAGGGTA+AGG | - | chr1_4:73415524-73415543 | Msa0184170:intron | 50.0% | |
| ! | TTACAGACTGGTCGACGATG+GGG | + | chr1_4:73415649-73415668 | None:intergenic | 50.0% |
| ! | CTTACAGACTGGTCGACGAT+GGG | + | chr1_4:73415650-73415669 | None:intergenic | 50.0% |
| ! | ACTTACAGACTGGTCGACGA+TGG | + | chr1_4:73415651-73415670 | None:intergenic | 50.0% |
| ! | GTTCACAGGGATAAGAGTGC+TGG | + | chr1_4:73415724-73415743 | None:intergenic | 50.0% |
| GAACACCATTGCCATTCAGG+TGG | - | chr1_4:73415740-73415759 | Msa0184170:intron | 50.0% | |
| CTAGCTCAACCAGACATGGT+CGG | + | chr1_4:73415779-73415798 | None:intergenic | 50.0% | |
| TCACCTAGCTCAACCAGACA+TGG | + | chr1_4:73415783-73415802 | None:intergenic | 50.0% | |
| ATGTCTGGTTGAGCTAGGTG+AGG | - | chr1_4:73415782-73415801 | Msa0184170:intron | 50.0% | |
| ! | AATTGCCTGCAAGGCTTGGT+TGG | + | chr1_4:73415835-73415854 | None:intergenic | 50.0% |
| GATCAATTGCCTGCAAGGCT+TGG | + | chr1_4:73415839-73415858 | None:intergenic | 50.0% | |
| GTTGGTTACACACGTGCCAC+GGG | - | chr1_4:73407964-73407983 | Msa0184170:three_prime_UTR | 55.0% | |
| TCCACCATTGCACGTGCTCT+TGG | - | chr1_4:73408748-73408767 | Msa0184170:intron | 55.0% | |
| ! | TCCAAGAGCACGTGCAATGG+TGG | + | chr1_4:73408752-73408771 | None:intergenic | 55.0% |
| ! | CTCTCCAAGAGCACGTGCAA+TGG | + | chr1_4:73408755-73408774 | None:intergenic | 55.0% |
| CATTGCACGTGCTCTTGGAG+AGG | - | chr1_4:73408753-73408772 | Msa0184170:intron | 55.0% | |
| ! | TGTGTTGCTCCCACCTTTGG+AGG | - | chr1_4:73408903-73408922 | Msa0184170:intron | 55.0% |
| GTGTTGAGGAAACCTGCGTG+AGG | - | chr1_4:73408935-73408954 | Msa0184170:intron | 55.0% | |
| ! | CACAGCTTTATCCCTCACGC+AGG | + | chr1_4:73408950-73408969 | None:intergenic | 55.0% |
| CTGCGTGAGGGATAAAGCTG+TGG | - | chr1_4:73408948-73408967 | Msa0184170:intron | 55.0% | |
| ! | ATGCGGGAGCTCTAATGCAC+CGG | + | chr1_4:73410781-73410800 | None:intergenic | 55.0% |
| ! | ATGTTTGGGGTGGGAGTAGG+AGG | - | chr1_4:73411667-73411686 | Msa0184170:intron | 55.0% |
| ! | TGTTTGGGGTGGGAGTAGGA+GGG | - | chr1_4:73411668-73411687 | Msa0184170:intron | 55.0% |
| GTCTTGGCGTGTGCGTTACA+TGG | - | chr1_4:73412465-73412484 | Msa0184170:intron | 55.0% | |
| AGGTACGCATAGCAGCTGCT+GGG | - | chr1_4:73412787-73412806 | Msa0184170:intron | 55.0% | |
| ACAGCATGTCCGTTCTGCAC+TGG | - | chr1_4:73413013-73413032 | Msa0184170:intron | 55.0% | |
| TCCGCAAGCTCAACAATGGC+TGG | + | chr1_4:73414238-73414257 | None:intergenic | 55.0% | |
| AGCCATTGTTGAGCTTGCGG+AGG | - | chr1_4:73414237-73414256 | Msa0184170:CDS | 55.0% | |
| AGCTTGCGGAGGATAGGCAT+TGG | - | chr1_4:73414248-73414267 | Msa0184170:intron | 55.0% | |
| TGGGTGCTCTTTGCATGCAG+TGG | - | chr1_4:73414347-73414366 | Msa0184170:intron | 55.0% | |
| ATGTGCTGCATAGCCCACTC+AGG | + | chr1_4:73414524-73414543 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr1_4:73415151-73415170 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1_4:73415150-73415169 | Msa0184170:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1_4:73415151-73415170 | Msa0184170:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1_4:73415157-73415176 | Msa0184170:CDS | 55.0% | |
| TCCCTGCTAGCCCCTGTAAT+GGG | - | chr1_4:73415411-73415430 | Msa0184170:CDS | 55.0% | |
| GCCCTATGCCATTGCACCAT+AGG | - | chr1_4:73415518-73415537 | Msa0184170:intron | 55.0% | |
| CGACCATGTCTGGTTGAGCT+AGG | - | chr1_4:73415777-73415796 | Msa0184170:intron | 55.0% | |
| TACACACGTGCCACGGGCAA+CGG | - | chr1_4:73407970-73407989 | Msa0184170:three_prime_UTR | 60.0% | |
| TGGAGAGGAGCGAACCCGTA+AGG | - | chr1_4:73408768-73408787 | Msa0184170:intron | 60.0% | |
| ACTGCCCGAGTCTCTGCATG+TGG | - | chr1_4:73409462-73409481 | Msa0184170:intron | 60.0% | |
| CAGCATGGAACGGCCAATCC+CGG | - | chr1_4:73410616-73410635 | Msa0184170:intron | 60.0% | |
| ! | TGCGGGAGCTCTAATGCACC+GGG | + | chr1_4:73410780-73410799 | None:intergenic | 60.0% |
| GCCCCAATGGTACGAACGCA+TGG | + | chr1_4:73411154-73411173 | None:intergenic | 60.0% | |
| GGTGGCAGCTACAGCCTACA+TGG | + | chr1_4:73411231-73411250 | None:intergenic | 60.0% | |
| CGCCAAGACTTATCCTGCCC+AGG | + | chr1_4:73412454-73412473 | None:intergenic | 60.0% | |
| TACGGCCCAACCCTAAAGCC+CGG | - | chr1_4:73412656-73412675 | Msa0184170:intron | 60.0% | |
| GAGGTACGCATAGCAGCTGC+TGG | - | chr1_4:73412786-73412805 | Msa0184170:intron | 60.0% | |
| TGGGAGGACGGTGGAAAGTG+AGG | + | chr1_4:73413431-73413450 | None:intergenic | 60.0% | |
| CTTGTTGCAGGCTGGGAGGA+CGG | + | chr1_4:73413443-73413462 | None:intergenic | 60.0% | |
| GTCCTCCCAGCCTGCAACAA+GGG | - | chr1_4:73413442-73413461 | Msa0184170:intron | 60.0% | |
| TTCCCTTGTTGCAGGCTGGG+AGG | + | chr1_4:73413447-73413466 | None:intergenic | 60.0% | |
| ATGTTCAGCCATCCCCCCCT+TGG | - | chr1_4:73415195-73415214 | Msa0184170:CDS | 60.0% | |
| AGAGAGAGGCCAGAGCCAAG+GGG | + | chr1_4:73415213-73415232 | None:intergenic | 60.0% | |
| CAGAGAGAGGCCAGAGCCAA+GGG | + | chr1_4:73415214-73415233 | None:intergenic | 60.0% | |
| CTCCCTGCTAGCCCCTGTAA+TGG | - | chr1_4:73415410-73415429 | Msa0184170:CDS | 60.0% | |
| ! | GCCCATTACAGGGGCTAGCA+GGG | + | chr1_4:73415415-73415434 | None:intergenic | 60.0% |
| ! | AGCCCATTACAGGGGCTAGC+AGG | + | chr1_4:73415416-73415435 | None:intergenic | 60.0% |
| CTGGTCGACGATGGGGAAGA+TGG | + | chr1_4:73415642-73415661 | None:intergenic | 60.0% | |
| ! | GTGGAGGGCTGTGCTGCTCT+TGG | - | chr1_4:73409850-73409869 | Msa0184170:CDS | 65.0% |
| TTGGGGTGGGAGTAGGAGGG+AGG | - | chr1_4:73411671-73411690 | Msa0184170:intron | 65.0% | |
| CTGTAGGCCCCGAACCTACC+AGG | - | chr1_4:73412518-73412537 | Msa0184170:intron | 65.0% | |
| CGTCCTCCCAGCCTGCAACA+AGG | - | chr1_4:73413441-73413460 | Msa0184170:intron | 65.0% | |
| AGAGAGGCCAGAGCCAAGGG+GGG | + | chr1_4:73415211-73415230 | None:intergenic | 65.0% | |
| GAGAGAGGCCAGAGCCAAGG+GGG | + | chr1_4:73415212-73415231 | None:intergenic | 65.0% | |
| CCAGAGAGAGGCCAGAGCCA+AGG | + | chr1_4:73415215-73415234 | None:intergenic | 65.0% | |
| !! | CCTTGGCTCTGGCCTCTCTC+TGG | - | chr1_4:73415212-73415231 | Msa0184170:CDS | 65.0% |
| GTCCTCGAAGGGCCAGAGAG+AGG | + | chr1_4:73415227-73415246 | None:intergenic | 65.0% | |
| GAAAGACGCACGCGCGCGCA+TGG | + | chr1_4:73408335-73408354 | None:intergenic | 70.0% | |
| GTTGCAGGCTGGGAGGACGG+TGG | + | chr1_4:73413440-73413459 | None:intergenic | 70.0% | |
| AGCCATCCCCCCCTTGGCTC+TGG | - | chr1_4:73415201-73415220 | Msa0184170:CDS | 70.0% | |
| GAGAGGCCAGAGCCAAGGGG+GGG | + | chr1_4:73415210-73415229 | None:intergenic | 70.0% | |
| GGCCTCTCTCTGGCCCTTCG+AGG | - | chr1_4:73415222-73415241 | Msa0184170:CDS | 70.0% | |
| GGCCAGAGCCAAGGGGGGGA+TGG | + | chr1_4:73415206-73415225 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 73407909 | 73416177 | 73407909 | ID=Msa0184170;Name=Msa0184170 |
| chr1_4 | mRNA | 73407909 | 73416177 | 73407909 | ID=Msa0184170-mRNA-1;Parent=Msa0184170;Name=Msa0184170-mRNA-1;_AED=0.09;_eAED=0.09;_QI=331|1|1|1|1|0.92|13|299|587 |
| chr1_4 | exon | 73407909 | 73408327 | 73407909 | ID=Msa0184170-mRNA-1:exon:24991;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73408422 | 73408488 | 73408422 | ID=Msa0184170-mRNA-1:exon:24990;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73408596 | 73408735 | 73408596 | ID=Msa0184170-mRNA-1:exon:24989;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73409533 | 73409625 | 73409533 | ID=Msa0184170-mRNA-1:exon:24988;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73409705 | 73409887 | 73409705 | ID=Msa0184170-mRNA-1:exon:24987;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73410075 | 73410179 | 73410075 | ID=Msa0184170-mRNA-1:exon:24986;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73411013 | 73411093 | 73411013 | ID=Msa0184170-mRNA-1:exon:24985;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73411208 | 73411349 | 73411208 | ID=Msa0184170-mRNA-1:exon:24984;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73411547 | 73411626 | 73411547 | ID=Msa0184170-mRNA-1:exon:24983;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73414150 | 73414262 | 73414150 | ID=Msa0184170-mRNA-1:exon:24982;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73414402 | 73414648 | 73414402 | ID=Msa0184170-mRNA-1:exon:24981;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73415045 | 73415460 | 73415045 | ID=Msa0184170-mRNA-1:exon:24980;Parent=Msa0184170-mRNA-1 |
| chr1_4 | exon | 73415870 | 73416177 | 73415870 | ID=Msa0184170-mRNA-1:exon:24979;Parent=Msa0184170-mRNA-1 |
| chr1_4 | five_prime_UTR | 73415870 | 73416177 | 73415870 | ID=Msa0184170-mRNA-1:five_prime_utr;Parent=Msa0184170-mRNA-1 |
| chr1_4 | five_prime_UTR | 73415438 | 73415460 | 73415438 | ID=Msa0184170-mRNA-1:five_prime_utr;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73415045 | 73415437 | 73415045 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73414402 | 73414648 | 73414402 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73414150 | 73414262 | 73414150 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73411547 | 73411626 | 73411547 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73411208 | 73411349 | 73411208 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73411013 | 73411093 | 73411013 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73410075 | 73410179 | 73410075 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73409705 | 73409887 | 73409705 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73409533 | 73409625 | 73409533 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73408596 | 73408735 | 73408596 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73408422 | 73408488 | 73408422 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | CDS | 73408208 | 73408327 | 73408208 | ID=Msa0184170-mRNA-1:cds;Parent=Msa0184170-mRNA-1 |
| chr1_4 | three_prime_UTR | 73407909 | 73408207 | 73407909 | ID=Msa0184170-mRNA-1:three_prime_utr;Parent=Msa0184170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
