Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186190 | XP_013462064.1 | 98.357 | 487 | 8 | 0 | 1 | 487 | 1 | 487 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186190 | sp|Q94AA4|PFKA3_ARATH | 81.211 | 479 | 86 | 3 | 1 | 479 | 1 | 475 | 0.0 | 817 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186190 | A0A072V223 | 98.357 | 487 | 8 | 0 | 1 | 487 | 1 | 487 | 0.0 | 993 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0186190 | Msa0383930 | 0.807551 | 4.782642e-50 | -8.615850e-47 |
| Msa0186190 | Msa0384590 | 0.800547 | 1.369462e-48 | -8.615850e-47 |
| Msa0186190 | Msa0478130 | 0.906838 | 9.668956e-81 | -8.615850e-47 |
| Msa0186190 | Msa0478190 | 0.883902 | 3.027316e-71 | -8.615850e-47 |
| Msa0186190 | Msa0522290 | 0.961849 | 3.512365e-120 | -8.615850e-47 |
| Msa0186190 | Msa1197720 | 0.836617 | 8.427397e-57 | -8.615850e-47 |
| Msa0186190 | Msa1251410 | 0.802185 | 6.326077e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186190 | MtrunA17_Chr3g0140611 | 98.357 | 487 | 8 | 0 | 1 | 487 | 1 | 487 | 0.0 | 993 |
| Msa0186190 | MtrunA17_Chr6g0487421 | 81.838 | 468 | 85 | 0 | 8 | 475 | 4 | 471 | 0.0 | 813 |
| Msa0186190 | MtrunA17_Chr8g0389631 | 81.978 | 455 | 81 | 1 | 4 | 457 | 3 | 457 | 0.0 | 793 |
| Msa0186190 | MtrunA17_Chr2g0330871 | 76.169 | 449 | 105 | 2 | 19 | 466 | 18 | 465 | 0.0 | 716 |
| Msa0186190 | MtrunA17_Chr1g0196891 | 72.383 | 449 | 123 | 1 | 16 | 464 | 82 | 529 | 0.0 | 699 |
| Msa0186190 | MtrunA17_Chr4g0076591 | 50.457 | 438 | 189 | 6 | 21 | 455 | 27 | 439 | 7.83e-152 | 440 |
| Msa0186190 | MtrunA17_Chr8g0367681 | 53.704 | 378 | 167 | 4 | 79 | 454 | 158 | 529 | 1.71e-134 | 399 |
| Msa0186190 | MtrunA17_Chr5g0412481 | 52.116 | 378 | 173 | 4 | 79 | 454 | 162 | 533 | 5.34e-132 | 392 |
| Msa0186190 | MtrunA17_Chr4g0030501 | 64.815 | 54 | 19 | 0 | 356 | 409 | 8 | 61 | 1.35e-17 | 77.8 |
| Msa0186190 | MtrunA17_Chr2g0289271 | 26.842 | 190 | 132 | 3 | 97 | 279 | 98 | 287 | 1.31e-11 | 67.0 |
| Msa0186190 | MtrunA17_Chr4g0075371 | 27.083 | 192 | 129 | 3 | 97 | 279 | 102 | 291 | 1.83e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186190 | AT4G26270.1 | 81.211 | 479 | 86 | 3 | 1 | 479 | 1 | 475 | 0.0 | 817 |
| Msa0186190 | AT5G56630.1 | 81.013 | 474 | 86 | 4 | 1 | 474 | 1 | 470 | 0.0 | 793 |
| Msa0186190 | AT4G29220.1 | 82.571 | 459 | 77 | 2 | 1 | 458 | 1 | 457 | 0.0 | 792 |
| Msa0186190 | AT4G32840.1 | 81.798 | 456 | 80 | 1 | 1 | 456 | 1 | 453 | 0.0 | 789 |
| Msa0186190 | AT5G61580.1 | 75.854 | 439 | 106 | 0 | 16 | 454 | 66 | 504 | 0.0 | 720 |
| Msa0186190 | AT5G61580.2 | 75.854 | 439 | 105 | 1 | 16 | 454 | 66 | 503 | 0.0 | 715 |
| Msa0186190 | AT5G47810.1 | 55.263 | 418 | 184 | 2 | 39 | 453 | 21 | 438 | 2.35e-167 | 480 |
| Msa0186190 | AT2G22480.1 | 53.968 | 378 | 166 | 4 | 79 | 454 | 166 | 537 | 3.64e-138 | 409 |
| Msa0186190 | AT4G04040.1 | 27.670 | 206 | 141 | 4 | 82 | 279 | 86 | 291 | 1.54e-12 | 70.1 |
| Msa0186190 | AT1G12000.1 | 27.083 | 192 | 129 | 3 | 97 | 279 | 100 | 289 | 3.33e-11 | 65.9 |
Find 141 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCCACCAAATACAATTT+TGG | 0.181586 | 2_1:+902919 | None:intergenic |
| TACTTCAAGATGTTGGTTTA+TGG | 0.202635 | 2_1:-904429 | Msa0186190:CDS |
| TTCAACATGTGCTGCATTAA+TGG | 0.206437 | 2_1:+904897 | None:intergenic |
| CTTTATTTGATGAACATCTT+TGG | 0.232102 | 2_1:+903133 | None:intergenic |
| TTGTATTCCAAAATTGTATT+TGG | 0.240105 | 2_1:-902926 | Msa0186190:three_prime_UTR |
| TTTATGAATTTATTACAAAA+AGG | 0.275122 | 2_1:-904561 | Msa0186190:CDS |
| GAATCGTTCCTCCACGCTTA+TGG | 0.286336 | 2_1:+907073 | None:intergenic |
| TTTATTTGATGAACATCTTT+GGG | 0.300163 | 2_1:+903134 | None:intergenic |
| TACCGGGATGTCATTATCTA+TGG | 0.300219 | 2_1:+905101 | None:intergenic |
| CTTACTCAGCTGATTAAGTT+TGG | 0.303852 | 2_1:-902715 | Msa0186190:three_prime_UTR |
| TGGATGTCATTGACCACTTT+AGG | 0.304572 | 2_1:+907093 | None:intergenic |
| TTGGTTCAGGTTTATATCAT+TGG | 0.329391 | 2_1:-906833 | Msa0186190:intron |
| TGTTTCCAGAAGCATCCTTC+TGG | 0.336049 | 2_1:+904455 | None:intergenic |
| CAGGCAGTACTTTGTGCATA+TGG | 0.344963 | 2_1:-908480 | Msa0186190:CDS |
| CTTGCTCAGAGTGCAGTTCA+TGG | 0.350658 | 2_1:-903628 | Msa0186190:CDS |
| ACCCTTCCCTTCAAGGTAGA+AGG | 0.353106 | 2_1:+904588 | None:intergenic |
| GGTGCAATGGCTGGGTATAC+TGG | 0.356523 | 2_1:-903607 | Msa0186190:CDS |
| CACAACGTTGTTCATCTTCT+CGG | 0.359054 | 2_1:+903217 | None:intergenic |
| AAGCGTGGAGGAACGATTCT+TGG | 0.367428 | 2_1:-907069 | Msa0186190:CDS |
| GGATTAGATCGAAGTGGATT+AGG | 0.375412 | 2_1:+908623 | None:intergenic |
| GCCATTGTTCTTAAATATAT+AGG | 0.384279 | 2_1:-903805 | Msa0186190:intron |
| AAAGTCCACCCTTCCCTTCA+AGG | 0.386654 | 2_1:+904581 | None:intergenic |
| ATCTAGTAACTTACGTTGAA+TGG | 0.388848 | 2_1:+903544 | None:intergenic |
| TCCCTTCTAACAACTGAGTC+AGG | 0.397166 | 2_1:+903096 | None:intergenic |
| TCCCTGACTCAGTTGTTAGA+AGG | 0.398852 | 2_1:-903098 | Msa0186190:CDS |
| TGTGGTCTTTCTTACATGTA+TGG | 0.400190 | 2_1:-907689 | Msa0186190:CDS |
| CATTGGTGTTGTAAAGCTAA+TGG | 0.401351 | 2_1:-904854 | Msa0186190:CDS |
| CGTCGAAAATGAACACCTCT+TGG | 0.402495 | 2_1:+907913 | None:intergenic |
| CCTGATTAATTCCCCGATCC+TGG | 0.409242 | 2_1:+907001 | None:intergenic |
| TTCATATAATGAAGTTTCAT+AGG | 0.409709 | 2_1:-902815 | Msa0186190:three_prime_UTR |
| TAGGTTATCGACAGGTCCTT+TGG | 0.411323 | 2_1:-904952 | Msa0186190:CDS |
| CTAAAACTCTTGTAGAGATA+AGG | 0.411411 | 2_1:+902611 | None:intergenic |
| ATTCCCACTCAGTTGATAGA+AGG | 0.412182 | 2_1:-903030 | Msa0186190:three_prime_UTR |
| AGTTGACAGCATCCAGGATC+GGG | 0.419001 | 2_1:-907013 | Msa0186190:CDS |
| CCGACGTGTCAAGGTGGGTC+TGG | 0.421637 | 2_1:+909035 | None:intergenic |
| TATTCCAAAATTGTATTTGG+TGG | 0.424483 | 2_1:-902923 | Msa0186190:three_prime_UTR |
| TTTACACAGGGTGGTTATAG+AGG | 0.429359 | 2_1:-907147 | Msa0186190:intron |
| GCAGTTCATGGTGCAATGGC+TGG | 0.433123 | 2_1:-903616 | Msa0186190:CDS |
| CCAGGATCGGGGAATTAATC+AGG | 0.433988 | 2_1:-907001 | Msa0186190:intron |
| GGGTATACTGGATTCACTGC+TGG | 0.434313 | 2_1:-903595 | Msa0186190:CDS |
| TAGGTTGTTGTTCACAAAGA+TGG | 0.437604 | 2_1:-907937 | Msa0186190:CDS |
| GAGTCACCCTTCTACCTTGA+AGG | 0.442197 | 2_1:-904595 | Msa0186190:CDS |
| GAGATTGAGTTGTGTGTTCA+AGG | 0.444965 | 2_1:-902638 | Msa0186190:three_prime_UTR |
| CAGATCCAACTTACATGATC+CGG | 0.445131 | 2_1:-903693 | Msa0186190:CDS |
| AATGAAAGAAATAAGAAGAA+AGG | 0.446797 | 2_1:+908926 | None:intergenic |
| ACATGTGGTGGTCTCTGCCC+TGG | 0.450770 | 2_1:-907740 | Msa0186190:CDS |
| CTGGCCTCAACACTGTCATA+AGG | 0.454068 | 2_1:-907721 | Msa0186190:CDS |
| ATGGACCAGAAGGATGCTTC+TGG | 0.455785 | 2_1:-904460 | Msa0186190:CDS |
| GGTGTGTCTAATTAAAGTAC+TGG | 0.459268 | 2_1:-902839 | Msa0186190:three_prime_UTR |
| GATTCTTTAGAGTAAAGAAA+TGG | 0.464742 | 2_1:-908836 | Msa0186190:exon |
| TGGCCTCAACACTGTCATAA+GGG | 0.467515 | 2_1:-907720 | Msa0186190:CDS |
| GTTTATATCATTGGAGGAGA+TGG | 0.470046 | 2_1:-906824 | Msa0186190:CDS |
| GAAGGGAGCAATTGCAATGT+TGG | 0.471533 | 2_1:-903080 | Msa0186190:CDS |
| CTCTGCCGACGTGTCAAGGT+GGG | 0.473413 | 2_1:+909030 | None:intergenic |
| AACAAGCTACTTCAAGATGT+TGG | 0.473799 | 2_1:-904436 | Msa0186190:CDS |
| TCTGCTCTGCCGACGTGTCA+AGG | 0.473921 | 2_1:+909026 | None:intergenic |
| GGATGACACCGTTCCTCAAA+AGG | 0.474449 | 2_1:-908459 | Msa0186190:intron |
| CTTATGACAGTGTTGAGGCC+AGG | 0.477976 | 2_1:+907722 | None:intergenic |
| TTCACTGCTGGACTTGTGAA+TGG | 0.485445 | 2_1:-903583 | Msa0186190:CDS |
| AGCGTGGAGGAACGATTCTT+GGG | 0.486903 | 2_1:-907068 | Msa0186190:CDS |
| ACGTGCAGGACCTCGGCAAA+AGG | 0.487268 | 2_1:-907893 | Msa0186190:intron |
| TACTTAACAACCGAGTAAGC+TGG | 0.487814 | 2_1:+908602 | None:intergenic |
| GCTGAAAGAAAGTGGACATA+TGG | 0.488751 | 2_1:-904539 | Msa0186190:CDS |
| GGTCTGAAAGTAGCAATTGC+TGG | 0.489039 | 2_1:-905135 | Msa0186190:CDS |
| TCAAGGTAGAAGGGTGACTC+TGG | 0.491308 | 2_1:+904598 | None:intergenic |
| TAAGAAGAAAGGAAAGAGAG+TGG | 0.492010 | 2_1:+908937 | None:intergenic |
| CATTACTTTAACTCCTAAAG+TGG | 0.494917 | 2_1:-907106 | Msa0186190:CDS |
| AAGCTAATGGGTCGTTATAG+TGG | 0.497189 | 2_1:-904841 | Msa0186190:intron |
| TCGATCTAATCCAGCTTACT+CGG | 0.498259 | 2_1:-908612 | Msa0186190:CDS |
| GTTCAGGTTTATATCATTGG+AGG | 0.500202 | 2_1:-906830 | Msa0186190:intron |
| GTCGAAAATGAACACCTCTT+GGG | 0.504803 | 2_1:+907914 | None:intergenic |
| TTATGACAGTGTTGAGGCCA+GGG | 0.506099 | 2_1:+907723 | None:intergenic |
| AAAATCGTCCATGGCGACGC+TGG | 0.506999 | 2_1:-908787 | Msa0186190:CDS |
| TCAAGAAATAAAATTAGATA+AGG | 0.522244 | 2_1:-902951 | Msa0186190:three_prime_UTR |
| ATGCATTGCTTGGAATTGCC+CGG | 0.523008 | 2_1:+903674 | None:intergenic |
| ATTGGTGTTGTAAAGCTAAT+GGG | 0.524626 | 2_1:-904853 | Msa0186190:CDS |
| TATGGTGTCGACAAAGTCCT+TGG | 0.526674 | 2_1:-907671 | Msa0186190:CDS |
| TGTTTGATTAGGTTATCGAC+AGG | 0.526843 | 2_1:-904960 | Msa0186190:intron |
| ACACTGTCTGATGCATTGCT+TGG | 0.537565 | 2_1:+903664 | None:intergenic |
| ATGGATATCTCATAAGATCA+AGG | 0.539762 | 2_1:-904410 | Msa0186190:intron |
| CCCTGACTCAGTTGTTAGAA+GGG | 0.543143 | 2_1:-903097 | Msa0186190:CDS |
| ACCCTTCTACCTTGAAGGGA+AGG | 0.543653 | 2_1:-904590 | Msa0186190:CDS |
| AGGAGCTGCTGTGATTTATG+AGG | 0.550657 | 2_1:-906792 | Msa0186190:intron |
| CCCTTCCCTTCAAGGTAGAA+GGG | 0.551850 | 2_1:+904589 | None:intergenic |
| TAGTTGACAGCATCCAGGAT+CGG | 0.553341 | 2_1:-907014 | Msa0186190:CDS |
| ATTGCCCGGATCATGTAAGT+TGG | 0.554329 | 2_1:+903688 | None:intergenic |
| CAAGATAGTTGACAGCATCC+AGG | 0.555399 | 2_1:-907019 | Msa0186190:CDS |
| TTCCCACTCAGTTGATAGAA+GGG | 0.555630 | 2_1:-903029 | Msa0186190:three_prime_UTR |
| ACGATTCTTGGGACATCCCG+AGG | 0.556156 | 2_1:-907057 | Msa0186190:CDS |
| ATAGTTATAGCTGAGGGAGC+AGG | 0.560671 | 2_1:-904514 | Msa0186190:CDS |
| AGATCCAACTTACATGATCC+GGG | 0.560914 | 2_1:-903692 | Msa0186190:CDS |
| AACCATAGATAATGACATCC+CGG | 0.563261 | 2_1:-905103 | Msa0186190:intron |
| CATGCAAGACATGGACCAGA+AGG | 0.565078 | 2_1:-904470 | Msa0186190:CDS |
| CACTTTAGGAGTTAAAGTAA+TGG | 0.565776 | 2_1:+907107 | None:intergenic |
| CGATTCTTGGGACATCCCGA+GGG | 0.578094 | 2_1:-907056 | Msa0186190:CDS |
| GTATGTAACCAGCGTCGCCA+TGG | 0.578458 | 2_1:+908779 | None:intergenic |
| TACAGAAAGCATGCAAGACA+TGG | 0.580338 | 2_1:-904479 | Msa0186190:CDS |
| AGTCACCCTTCTACCTTGAA+GGG | 0.585876 | 2_1:-904594 | Msa0186190:CDS |
| CAGTTCATGGTGCAATGGCT+GGG | 0.590436 | 2_1:-903615 | Msa0186190:CDS |
| GTGGGTCTGGACCGTTCGTG+TGG | 0.590502 | 2_1:+909048 | None:intergenic |
| ACCTATATATTTAAGAACAA+TGG | 0.594094 | 2_1:+903804 | None:intergenic |
| GCTTGTATTGTCACATGTGG+TGG | 0.594598 | 2_1:-907752 | Msa0186190:CDS |
| CCCTTCTACCTTGAAGGGAA+GGG | 0.594930 | 2_1:-904589 | Msa0186190:CDS |
| TTCTACCTTGAAGGGAAGGG+TGG | 0.595567 | 2_1:-904586 | Msa0186190:CDS |
| TTGTGATTACTGACAGAATG+TGG | 0.596485 | 2_1:-903199 | Msa0186190:CDS |
| GCTCTGCCGACGTGTCAAGG+TGG | 0.602525 | 2_1:+909029 | None:intergenic |
| TCCCCTTCTATCAACTGAGT+GGG | 0.604482 | 2_1:+903027 | None:intergenic |
| AGGAAGATTTGGAACGTAGT+CGG | 0.608157 | 2_1:+908735 | None:intergenic |
| GTCAATGACATCCATAAGCG+TGG | 0.610080 | 2_1:-907084 | Msa0186190:CDS |
| CCTCCATCTCTCCACACGAA+CGG | 0.611839 | 2_1:-909059 | None:intergenic |
| TTCTTGGGACATCCCGAGGG+GGG | 0.614995 | 2_1:-907053 | Msa0186190:CDS |
| GAAAGTGTTGAGAATGGCAT+TGG | 0.625093 | 2_1:-904871 | Msa0186190:CDS |
| TTTCCCTTATGACAGTGTTG+AGG | 0.626794 | 2_1:+907717 | None:intergenic |
| AGCCACTCACATCTATGCCA+AGG | 0.627188 | 2_1:+907654 | None:intergenic |
| GAGTGCAGTTCATGGTGCAA+TGG | 0.628896 | 2_1:-903620 | Msa0186190:CDS |
| ATTCTTGGGACATCCCGAGG+GGG | 0.629130 | 2_1:-907054 | Msa0186190:CDS |
| TCACAGATGAAAATCGTCCA+TGG | 0.630554 | 2_1:-908796 | Msa0186190:CDS |
| ATTGCTTGTATTGTCACATG+TGG | 0.630601 | 2_1:-907755 | Msa0186190:CDS |
| ATGGTCATAGTTATAGCTGA+GGG | 0.632087 | 2_1:-904520 | Msa0186190:CDS |
| TACTCTTGCTAGTAGAGATG+TGG | 0.632402 | 2_1:-904635 | Msa0186190:CDS |
| CCCTTCTAACAACTGAGTCA+GGG | 0.632890 | 2_1:+903097 | None:intergenic |
| AACTGCGGTATCAAAACCAA+AGG | 0.633694 | 2_1:+904936 | None:intergenic |
| GTCCCCTTCTATCAACTGAG+TGG | 0.636892 | 2_1:+903026 | None:intergenic |
| TATGGTCATAGTTATAGCTG+AGG | 0.638112 | 2_1:-904521 | Msa0186190:CDS |
| AGCTGATTAAGTTTGGCACA+AGG | 0.638717 | 2_1:-902708 | Msa0186190:three_prime_UTR |
| GGAACGTAGTCGGAGAGATG+AGG | 0.638776 | 2_1:+908745 | None:intergenic |
| GAAGCTGAAAGTGTTGAGAA+TGG | 0.642124 | 2_1:-904877 | Msa0186190:CDS |
| TCCCACTCAGTTGATAGAAG+GGG | 0.643504 | 2_1:-903028 | Msa0186190:three_prime_UTR |
| GTAAGAGACTGCTTGTGTGA+AGG | 0.648800 | 2_1:+902733 | None:intergenic |
| TAAGCTGGATTAGATCGAAG+TGG | 0.651196 | 2_1:+908617 | None:intergenic |
| GTTGACAGCATCCAGGATCG+GGG | 0.664069 | 2_1:-907012 | Msa0186190:CDS |
| GTTCACAAAGATGGCCCAAG+AGG | 0.667902 | 2_1:-907928 | Msa0186190:CDS |
| GATTCTTGGGACATCCCGAG+GGG | 0.672975 | 2_1:-907055 | Msa0186190:CDS |
| TGCAACTGTCACTGTCAGCG+AGG | 0.681592 | 2_1:+902974 | None:intergenic |
| GGAGGAGATGGAACACAGCG+AGG | 0.687653 | 2_1:-906812 | Msa0186190:CDS |
| ACGTTGAGCCTCCTCAACTG+CGG | 0.700198 | 2_1:+904921 | None:intergenic |
| TGTGATTACTGACAGAATGT+GGG | 0.717274 | 2_1:-903198 | Msa0186190:CDS |
| CCAGACCCACCTTGACACGT+CGG | 0.721162 | 2_1:-909035 | Msa0186190:five_prime_UTR |
| GTCATAAGGGAAATTGTGTG+TGG | 0.728717 | 2_1:-907707 | Msa0186190:CDS |
| AATGACATCCATAAGCGTGG+AGG | 0.732879 | 2_1:-907081 | Msa0186190:CDS |
| ATACAGGAAGTTAGACAGCG+AGG | 0.746448 | 2_1:-905156 | Msa0186190:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATTTAAATATTACAA+AGG | - | chr2_1:906129-906148 | Msa0186190:intron | 10.0% |
| !! | TTTATGAATTTATTACAAAA+AGG | - | chr2_1:907057-907076 | Msa0186190:CDS | 10.0% |
| !! | GTAAATAAATATAAAAAAAC+TGG | + | chr2_1:907670-907689 | None:intergenic | 10.0% |
| !! | ATCTTAGAAAAATAAAAAAT+TGG | + | chr2_1:908326-908345 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_1:905726-905745 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_1:905726-905745 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_1:905726-905745 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_1:905726-905745 | None:intergenic | 100.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_1:905733-905752 | None:intergenic | 100.0% |
| ! | CCGGGGGGGGGGGGGGGGGG+GGG | + | chr2_1:905734-905753 | None:intergenic | 100.0% |
| ! | CCCCCCCCCCCCCCCCCCCC+CGG | - | chr2_1:905726-905745 | Msa0186190:intron | 100.0% |
| !!! | TACTATTTTTTCTTTGTTTT+TGG | + | chr2_1:902746-902765 | None:intergenic | 15.0% |
| !!! | TCATTTTTGTAAATTATTCT+TGG | - | chr2_1:904120-904139 | Msa0186190:intron | 15.0% |
| !!! | CATTTTTGTAAATTATTCTT+GGG | - | chr2_1:904121-904140 | Msa0186190:intron | 15.0% |
| !!! | ATTTTTGTAAATTATTCTTG+GGG | - | chr2_1:904122-904141 | Msa0186190:intron | 15.0% |
| !! | TAATAGAATATTCCTTTATT+TGG | - | chr2_1:904871-904890 | Msa0186190:CDS | 15.0% |
| !! | TCCTAAAAATTAAAAAGAAA+CGG | + | chr2_1:905947-905966 | None:intergenic | 15.0% |
| !! | AATGAAATAATAAATGTTTC+GGG | + | chr2_1:906044-906063 | None:intergenic | 15.0% |
| !! | GAATGAAATAATAAATGTTT+CGG | + | chr2_1:906045-906064 | None:intergenic | 15.0% |
| !! | ATTTAAATATTACAAAGGAA+CGG | - | chr2_1:906134-906153 | Msa0186190:intron | 15.0% |
| !!! | TTATGCTATATAATTTGTTT+AGG | + | chr2_1:907305-907324 | None:intergenic | 15.0% |
| !! | TAAAAAAACTAATCCAAATA+GGG | + | chr2_1:907429-907448 | None:intergenic | 15.0% |
| !! | ATAAAAATTAAGATGTAGAA+TGG | - | chr2_1:907466-907485 | Msa0186190:intron | 15.0% |
| !! | AAGTTGAATGTTTATTAAAA+GGG | + | chr2_1:907756-907775 | None:intergenic | 15.0% |
| !! | TCAAGAAATAAAATTAGATA+AGG | - | chr2_1:908667-908686 | Msa0186190:intron | 15.0% |
| !!! | GAAACGTTTGATTATTTTTT+CGG | + | chr2_1:902621-902640 | None:intergenic | 20.0% |
| !! | AATGAAAGAAATAAGAAGAA+AGG | + | chr2_1:902695-902714 | None:intergenic | 20.0% |
| !! | CAAATGTAACTGAAAAAATT+GGG | + | chr2_1:902928-902947 | None:intergenic | 20.0% |
| !!! | TTTAAAGTAACAAACATGAA+TGG | + | chr2_1:903382-903401 | None:intergenic | 20.0% |
| !!! | CTGAATGTTTGTTATTATTA+CGG | - | chr2_1:903566-903585 | Msa0186190:CDS | 20.0% |
| !! | ATAATAATGTGTACTAAAGT+TGG | + | chr2_1:904167-904186 | None:intergenic | 20.0% |
| !! | TTGAAAAGAAGAAAAAACAA+GGG | + | chr2_1:905585-905604 | None:intergenic | 20.0% |
| !! | TTTGAAAAGAAGAAAAAACA+AGG | + | chr2_1:905586-905605 | None:intergenic | 20.0% |
| !!! | TCCGTTTCTTTTTAATTTTT+AGG | - | chr2_1:905943-905962 | Msa0186190:intron | 20.0% |
| !! | ATGAAATAATAAATGTTTCG+GGG | + | chr2_1:906043-906062 | None:intergenic | 20.0% |
| !! | CAAAATAGAAAACATATGTA+CGG | + | chr2_1:906363-906382 | None:intergenic | 20.0% |
| !!! | AATATTTTAGTCATTACGTT+TGG | + | chr2_1:906877-906896 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCGTGTTGTAA+TGG | - | chr2_1:906926-906945 | Msa0186190:intron | 20.0% |
| !!! | TATATAATTTGTTTAGGAAG+AGG | + | chr2_1:907299-907318 | None:intergenic | 20.0% |
| !! | AAAAAAACTAATCCAAATAG+GGG | + | chr2_1:907428-907447 | None:intergenic | 20.0% |
| !! | CTAAAAAAACTAATCCAAAT+AGG | + | chr2_1:907430-907449 | None:intergenic | 20.0% |
| !!! | CAAGTTGAATGTTTATTAAA+AGG | + | chr2_1:907757-907776 | None:intergenic | 20.0% |
| !! | ACCTATATATTTAAGAACAA+TGG | + | chr2_1:907817-907836 | None:intergenic | 20.0% |
| !! | TGTTATTGATATATATCAAG+TGG | - | chr2_1:908149-908168 | Msa0186190:intron | 20.0% |
| !! | ATAAAAAATTGGATGCAAAT+AGG | + | chr2_1:908315-908334 | None:intergenic | 20.0% |
| !! | TTTATTTGATGAACATCTTT+GGG | + | chr2_1:908487-908506 | None:intergenic | 20.0% |
| !!! | AAATACAATTTTGGAATACA+AGG | + | chr2_1:908693-908712 | None:intergenic | 20.0% |
| !! | TTGTATTCCAAAATTGTATT+TGG | - | chr2_1:908692-908711 | Msa0186190:intron | 20.0% |
| !!! | AGGCTTATTTTTGTAAAATT+TGG | - | chr2_1:908756-908775 | Msa0186190:CDS | 20.0% |
| !!! | GGCTTATTTTTGTAAAATTT+GGG | - | chr2_1:908757-908776 | Msa0186190:CDS | 20.0% |
| !!! | GCTTATTTTTGTAAAATTTG+GGG | - | chr2_1:908758-908777 | Msa0186190:CDS | 20.0% |
| !! | TTCATATAATGAAGTTTCAT+AGG | - | chr2_1:908803-908822 | Msa0186190:CDS | 20.0% |
| !!! | ATTACAGACATTTTATGAAA+TGG | + | chr2_1:908853-908872 | None:intergenic | 20.0% |
| !!! | GATTCTTTAGAGTAAAGAAA+TGG | - | chr2_1:902782-902801 | Msa0186190:three_prime_UTR | 25.0% |
| ! | GCAAATGTAACTGAAAAAAT+TGG | + | chr2_1:902929-902948 | None:intergenic | 25.0% |
| !! | TTTGGAATAACTAACACATT+TGG | + | chr2_1:903092-903111 | None:intergenic | 25.0% |
| ! | AAAAGCAGAAAATCAACATT+TGG | + | chr2_1:903110-903129 | None:intergenic | 25.0% |
| ! | AATGAAGAAAATGAACAAAC+AGG | + | chr2_1:903215-903234 | None:intergenic | 25.0% |
| ! | TACCTATACAACAATTTACT+AGG | + | chr2_1:903822-903841 | None:intergenic | 25.0% |
| !!! | CTCTTTTAACTTATTCTCAT+TGG | - | chr2_1:903992-904011 | Msa0186190:intron | 25.0% |
| ! | ACACATTATTATATGTTCTC+TGG | - | chr2_1:904175-904194 | Msa0186190:intron | 25.0% |
| !!! | TTCAATTACTTTTGTCCATT+TGG | + | chr2_1:904273-904292 | None:intergenic | 25.0% |
| ! | TAAAATTAGATATAGCTCAG+TGG | + | chr2_1:904455-904474 | None:intergenic | 25.0% |
| !! | AGCTATATCTAATTTTACAC+AGG | - | chr2_1:904458-904477 | Msa0186190:CDS | 25.0% |
| !! | GCTATATCTAATTTTACACA+GGG | - | chr2_1:904459-904478 | Msa0186190:CDS | 25.0% |
| !! | TTGGAAACTTTTGTAGAATA+TGG | + | chr2_1:904664-904683 | None:intergenic | 25.0% |
| !! | ATATCAATGTTAACTTGAGT+AGG | - | chr2_1:904726-904745 | Msa0186190:intron | 25.0% |
| !! | GTTCTCCAAATTAATTTTGA+GGG | - | chr2_1:905059-905078 | Msa0186190:intron | 25.0% |
| !! | TTCTCCAAATTAATTTTGAG+GGG | - | chr2_1:905060-905079 | Msa0186190:intron | 25.0% |
| ! | CATTTAAATAAGTTACTGAC+AGG | - | chr2_1:905363-905382 | Msa0186190:intron | 25.0% |
| !!! | CCATTCAAATTTCACTTTTA+CGG | + | chr2_1:905798-905817 | None:intergenic | 25.0% |
| !! | TGTATATGATTTTCACTTGA+AGG | + | chr2_1:905837-905856 | None:intergenic | 25.0% |
| ! | GTAGATATATAACAAGGAAA+CGG | + | chr2_1:905881-905900 | None:intergenic | 25.0% |
| ! | ACTTCAGTAGATATATAACA+AGG | + | chr2_1:905887-905906 | None:intergenic | 25.0% |
| !! | TGAACATAATCGTGAATTTT+TGG | - | chr2_1:905910-905929 | Msa0186190:intron | 25.0% |
| !!! | ACAAAATTTGTTGATCATCT+TGG | + | chr2_1:905983-906002 | None:intergenic | 25.0% |
| ! | AAATATTGAAAAGGAACAGT+GGG | - | chr2_1:906200-906219 | Msa0186190:intron | 25.0% |
| !! | ATGTCATTATCTATGGTTTT+TGG | + | chr2_1:906513-906532 | None:intergenic | 25.0% |
| !!! | GATTAGTTTTTTTAGCAGAT+GGG | - | chr2_1:907435-907454 | Msa0186190:intron | 25.0% |
| !! | TATTTAGTATCTTCTGAAAG+TGG | + | chr2_1:907570-907589 | None:intergenic | 25.0% |
| ! | CACAAAAAATACTACATACA+TGG | - | chr2_1:907610-907629 | Msa0186190:intron | 25.0% |
| ! | GCCATTGTTCTTAAATATAT+AGG | - | chr2_1:907813-907832 | Msa0186190:intron | 25.0% |
| ! | ATACAACGAATAGATCAAAA+TGG | + | chr2_1:907864-907883 | None:intergenic | 25.0% |
| ! | AAAACGAACTTGATTTATAC+AGG | + | chr2_1:908249-908268 | None:intergenic | 25.0% |
| !! | CTTTATTTGATGAACATCTT+TGG | + | chr2_1:908488-908507 | None:intergenic | 25.0% |
| ! | TATTCCAAAATTGTATTTGG+TGG | - | chr2_1:908695-908714 | Msa0186190:intron | 25.0% |
| GAGAAAAATACAGGAAGATT+TGG | + | chr2_1:902897-902916 | None:intergenic | 30.0% | |
| !!! | TTTCTGCTTTTTGTGATTTC+AGG | - | chr2_1:903119-903138 | Msa0186190:CDS | 30.0% |
| !! | ATATAGAACCTTTTGAGGAA+CGG | + | chr2_1:903170-903189 | None:intergenic | 30.0% |
| ! | AACAGATATAGAACCTTTTG+AGG | + | chr2_1:903175-903194 | None:intergenic | 30.0% |
| ! | TAGTTGATGTTTGATAGATC+AGG | + | chr2_1:903280-903299 | None:intergenic | 30.0% |
| GTAAGAAGACTTTATACTGA+CGG | - | chr2_1:903471-903490 | Msa0186190:intron | 30.0% | |
| CATCAGTTAGTAATCAATCA+AGG | + | chr2_1:903513-903532 | None:intergenic | 30.0% | |
| TTTACTGAAATCAGAGAAAG+AGG | - | chr2_1:903596-903615 | Msa0186190:CDS | 30.0% | |
| ! | TTGTTTGTACACGTGTTATT+AGG | - | chr2_1:903760-903779 | Msa0186190:intron | 30.0% |
| GACCTAGTAAATTGTTGTAT+AGG | - | chr2_1:903817-903836 | Msa0186190:CDS | 30.0% | |
| ! | CATTACATTATTTGTTGCTC+TGG | - | chr2_1:904016-904035 | Msa0186190:intron | 30.0% |
| ATTATATGTTCTCTGGTTAC+TGG | - | chr2_1:904182-904201 | Msa0186190:intron | 30.0% | |
| TTCACAAATGGAAAAGGATA+TGG | + | chr2_1:904242-904261 | None:intergenic | 30.0% | |
| ! | TATCCTTTTCCATTTGTGAA+AGG | - | chr2_1:904242-904261 | Msa0186190:intron | 30.0% |
| ! | GAGTGAACTAAACAAACTTT+TGG | - | chr2_1:904342-904361 | Msa0186190:intron | 30.0% |
| !!! | CACTTTACTTTTTGTCACAT+CGG | - | chr2_1:904389-904408 | Msa0186190:intron | 30.0% |
| AGTTGCATTTCTTGATTCAT+TGG | - | chr2_1:904424-904443 | Msa0186190:CDS | 30.0% | |
| ! | ATATCTAATTTTACACAGGG+TGG | - | chr2_1:904462-904481 | Msa0186190:CDS | 30.0% |
| ! | CACTTTAGGAGTTAAAGTAA+TGG | + | chr2_1:904514-904533 | None:intergenic | 30.0% |
| CATTACTTTAACTCCTAAAG+TGG | - | chr2_1:904512-904531 | Msa0186190:CDS | 30.0% | |
| TTTCCAATGATACTGAATGA+TGG | - | chr2_1:904677-904696 | Msa0186190:intron | 30.0% | |
| ATTCCATCATTCAGTATCAT+TGG | + | chr2_1:904683-904702 | None:intergenic | 30.0% | |
| !! | ATTTTCACTGTTTGGGTTAT+TGG | - | chr2_1:904766-904785 | Msa0186190:intron | 30.0% |
| ! | TTGGTTCAGGTTTATATCAT+TGG | - | chr2_1:904785-904804 | Msa0186190:intron | 30.0% |
| !!! | TATGCTCTTATTTTCCTTAC+TGG | + | chr2_1:904900-904919 | None:intergenic | 30.0% |
| TCTTCACAATACAAGTGATT+AGG | - | chr2_1:905037-905056 | Msa0186190:intron | 30.0% | |
| ! | GGTTCTCCAAATTAATTTTG+AGG | - | chr2_1:905058-905077 | Msa0186190:intron | 30.0% |
| GTTACCCCTCAAAATTAATT+TGG | + | chr2_1:905067-905086 | None:intergenic | 30.0% | |
| TTAGCTGAGATACAGAAAAA+GGG | + | chr2_1:905255-905274 | None:intergenic | 30.0% | |
| ! | CTTTAGCTCAAATTTGGAAA+AGG | + | chr2_1:905408-905427 | None:intergenic | 30.0% |
| ! | CAACAACTTTAGCTCAAATT+TGG | + | chr2_1:905414-905433 | None:intergenic | 30.0% |
| CAAATTTGAGCTAAAGTTGT+TGG | - | chr2_1:905412-905431 | Msa0186190:intron | 30.0% | |
| !! | GTATTTTGAGCTAAAGTTGT+TGG | - | chr2_1:905473-905492 | Msa0186190:intron | 30.0% |
| AAGAAGAAAAAACAAGGGAA+GGG | + | chr2_1:905580-905599 | None:intergenic | 30.0% | |
| AAAGAAGAAAAAACAAGGGA+AGG | + | chr2_1:905581-905600 | None:intergenic | 30.0% | |
| TTTGGAAATAAGAAAGAACC+GGG | + | chr2_1:905752-905771 | None:intergenic | 30.0% | |
| GTTTGGAAATAAGAAAGAAC+CGG | + | chr2_1:905753-905772 | None:intergenic | 30.0% | |
| CCGTAAAAGTGAAATTTGAA+TGG | - | chr2_1:905795-905814 | Msa0186190:intron | 30.0% | |
| ATATATAACAAGGAAACGGA+AGG | + | chr2_1:905877-905896 | None:intergenic | 30.0% | |
| AATTAAAAAGAAACGGAGAG+TGG | + | chr2_1:905940-905959 | None:intergenic | 30.0% | |
| ! | TTTCGGGGTATTATAAGAAA+GGG | + | chr2_1:906028-906047 | None:intergenic | 30.0% |
| TTCTCTTTGCAATAAATCAC+TGG | - | chr2_1:906072-906091 | Msa0186190:intron | 30.0% | |
| TCTCTTTGCAATAAATCACT+GGG | - | chr2_1:906073-906092 | Msa0186190:intron | 30.0% | |
| TAAATATTACAAAGGAACGG+AGG | - | chr2_1:906137-906156 | Msa0186190:intron | 30.0% | |
| !!! | AACCGAGGAACATTATTTTT+TGG | - | chr2_1:906170-906189 | Msa0186190:intron | 30.0% |
| TGCCAAAAAATAATGTTCCT+CGG | + | chr2_1:906175-906194 | None:intergenic | 30.0% | |
| GGCAAATGCAAATATTGAAA+AGG | - | chr2_1:906191-906210 | Msa0186190:intron | 30.0% | |
| CAAATATTGAAAAGGAACAG+TGG | - | chr2_1:906199-906218 | Msa0186190:intron | 30.0% | |
| ACTACATTAGTGCAATATGT+TGG | - | chr2_1:906231-906250 | Msa0186190:intron | 30.0% | |
| !! | CAATATGTTGGTTTCCAAAA+AGG | - | chr2_1:906243-906262 | Msa0186190:intron | 30.0% |
| ! | AACTATACAAACCACCTTTT+TGG | + | chr2_1:906260-906279 | None:intergenic | 30.0% |
| ! | AAAAGGTGGTTTGTATAGTT+CGG | - | chr2_1:906260-906279 | Msa0186190:intron | 30.0% |
| ! | TTCTTGGCATCTTTTTAACA+TGG | - | chr2_1:906407-906426 | Msa0186190:intron | 30.0% |
| ! | TCTTGGCATCTTTTTAACAT+GGG | - | chr2_1:906408-906427 | Msa0186190:intron | 30.0% |
| ! | TAAGCATTCTGAGCATATTT+TGG | - | chr2_1:906434-906453 | Msa0186190:intron | 30.0% |
| !!! | GCATATTTTGGTTATCATAC+AGG | - | chr2_1:906446-906465 | Msa0186190:intron | 30.0% |
| ! | TAACCTTGTCATTTGAGTTA+CGG | - | chr2_1:906579-906598 | Msa0186190:intron | 30.0% |
| ! | CGTTTTTCTTCTGTTTGATT+AGG | - | chr2_1:906647-906666 | Msa0186190:intron | 30.0% |
| !! | ATTGGTGTTGTAAAGCTAAT+GGG | - | chr2_1:906765-906784 | Msa0186190:intron | 30.0% |
| ! | TTTTAGTCATTACGTTTGGA+TGG | + | chr2_1:906873-906892 | None:intergenic | 30.0% |
| !! | TACTTCAAGATGTTGGTTTA+TGG | - | chr2_1:907189-907208 | Msa0186190:intron | 30.0% |
| ATGGATATCTCATAAGATCA+AGG | - | chr2_1:907208-907227 | Msa0186190:intron | 30.0% | |
| TTAACTAGTTAACCTGTAGT+TGG | + | chr2_1:907379-907398 | None:intergenic | 30.0% | |
| !!! | GGATTAGTTTTTTTAGCAGA+TGG | - | chr2_1:907434-907453 | Msa0186190:intron | 30.0% |
| !!! | AGTATTTTTTGTGCATTGAG+TGG | + | chr2_1:907603-907622 | None:intergenic | 30.0% |
| TGCAACTATGATAATCTACA+GGG | + | chr2_1:907639-907658 | None:intergenic | 30.0% | |
| ATGCAACTATGATAATCTAC+AGG | + | chr2_1:907640-907659 | None:intergenic | 30.0% | |
| AATTGACTGTTCTTGATAGA+TGG | + | chr2_1:907718-907737 | None:intergenic | 30.0% | |
| !! | AACATTCAACTTGCTGAAAT+AGG | - | chr2_1:907764-907783 | Msa0186190:CDS | 30.0% |
| ! | GAAATAGGATCATTTTGCAA+AGG | - | chr2_1:907779-907798 | Msa0186190:CDS | 30.0% |
| ! | TTTTGCAAAGGAGAATAAGA+TGG | - | chr2_1:907791-907810 | Msa0186190:intron | 30.0% |
| TATGGCTAGATTTCTTAACT+GGG | - | chr2_1:907894-907913 | Msa0186190:CDS | 30.0% | |
| ATCTAGTAACTTACGTTGAA+TGG | + | chr2_1:908077-908096 | None:intergenic | 30.0% | |
| TGCACAATAACAAATGCTTA+AGG | - | chr2_1:908287-908306 | Msa0186190:intron | 30.0% | |
| ! | AACTCCACCAAATACAATTT+TGG | + | chr2_1:908702-908721 | None:intergenic | 30.0% |
| CTAAAACTCTTGTAGAGATA+AGG | + | chr2_1:909010-909029 | None:intergenic | 30.0% | |
| TAAGAAGAAAGGAAAGAGAG+TGG | + | chr2_1:902684-902703 | None:intergenic | 35.0% | |
| GAGAAGAGAGAGAAAAATAC+AGG | + | chr2_1:902906-902925 | None:intergenic | 35.0% | |
| ACATGAATGGTTGTGATTTG+CGG | + | chr2_1:903369-903388 | None:intergenic | 35.0% | |
| ACTTTATTGTCCCTTTCCAT+AGG | - | chr2_1:903662-903681 | Msa0186190:CDS | 35.0% | |
| TGAACAACAACCTATGGAAA+GGG | + | chr2_1:903675-903694 | None:intergenic | 35.0% | |
| TCTTTGTGAACAACAACCTA+TGG | + | chr2_1:903681-903700 | None:intergenic | 35.0% | |
| ! | TAGGTTGTTGTTCACAAAGA+TGG | - | chr2_1:903681-903700 | Msa0186190:CDS | 35.0% |
| ATTGCTTGTATTGTCACATG+TGG | - | chr2_1:903863-903882 | Msa0186190:intron | 35.0% | |
| TGTGGTCTTTCTTACATGTA+TGG | - | chr2_1:903929-903948 | Msa0186190:intron | 35.0% | |
| ! | AGTACATCTTTGTTTGTCTC+TGG | - | chr2_1:904087-904106 | Msa0186190:intron | 35.0% |
| ATGCCTTTCACAAATGGAAA+AGG | + | chr2_1:904248-904267 | None:intergenic | 35.0% | |
| CGATGTGACAAAAAGTAAAG+TGG | + | chr2_1:904391-904410 | None:intergenic | 35.0% | |
| AGTAGGTTATTGTCATGACA+TGG | - | chr2_1:904743-904762 | Msa0186190:intron | 35.0% | |
| ! | TGACATGGATTTTCACTGTT+TGG | - | chr2_1:904758-904777 | Msa0186190:intron | 35.0% |
| ! | GACATGGATTTTCACTGTTT+GGG | - | chr2_1:904759-904778 | Msa0186190:intron | 35.0% |
| ! | GTTCAGGTTTATATCATTGG+AGG | - | chr2_1:904788-904807 | Msa0186190:intron | 35.0% |
| GTTTATATCATTGGAGGAGA+TGG | - | chr2_1:904794-904813 | Msa0186190:intron | 35.0% | |
| CCTTACTGGAATCCAAATAA+AGG | + | chr2_1:904886-904905 | None:intergenic | 35.0% | |
| ! | CCTTTATTTGGATTCCAGTA+AGG | - | chr2_1:904883-904902 | Msa0186190:CDS | 35.0% |
| !! | TTAATTTTGAGGGGTAACCT+TGG | - | chr2_1:905069-905088 | Msa0186190:intron | 35.0% |
| CTTAGCTGAGATACAGAAAA+AGG | + | chr2_1:905256-905275 | None:intergenic | 35.0% | |
| GTTGGTTAACTAATGTCTTC+TGG | - | chr2_1:905430-905449 | Msa0186190:intron | 35.0% | |
| !! | AACTAATGTCTTCTGGAATG+TGG | - | chr2_1:905437-905456 | Msa0186190:intron | 35.0% |
| GTTGGTTAACTAATGTCTTC+TGG | - | chr2_1:905430-905449 | Msa0186190:intron | 35.0% | |
| !! | AACTAATGTCTTCTGGAATG+TGG | - | chr2_1:905437-905456 | Msa0186190:intron | 35.0% |
| ! | TGCAAATGATGATAGTGTAG+TGG | - | chr2_1:905609-905628 | Msa0186190:intron | 35.0% |
| GTTAGTTAACCAATGTCTTC+TGG | - | chr2_1:905637-905656 | Msa0186190:intron | 35.0% | |
| AAACAGTTTCCAGAAGACAT+TGG | + | chr2_1:905649-905668 | None:intergenic | 35.0% | |
| TTGGAAATAAGAAAGAACCG+GGG | + | chr2_1:905751-905770 | None:intergenic | 35.0% | |
| ! | ATGATTTTCACTTGAAGGCA+TGG | + | chr2_1:905832-905851 | None:intergenic | 35.0% |
| ! | GTTTCGGGGTATTATAAGAA+AGG | + | chr2_1:906029-906048 | None:intergenic | 35.0% |
| CTCTTTGCAATAAATCACTG+GGG | - | chr2_1:906074-906093 | Msa0186190:intron | 35.0% | |
| TCTTTGCAATAAATCACTGG+GGG | - | chr2_1:906075-906094 | Msa0186190:intron | 35.0% | |
| GGAGGAATTAAAAATAACCG+AGG | - | chr2_1:906155-906174 | Msa0186190:intron | 35.0% | |
| !! | TATGTTGGTTTCCAAAAAGG+TGG | - | chr2_1:906246-906265 | Msa0186190:intron | 35.0% |
| ! | TAGGTCAAGCTTTATGTTCA+AGG | - | chr2_1:906303-906322 | Msa0186190:intron | 35.0% |
| TTTATGTTCAAGGAACAGCT+GGG | - | chr2_1:906313-906332 | Msa0186190:intron | 35.0% | |
| !! | GATTGACTTGTTATCGTTCT+TGG | - | chr2_1:906391-906410 | Msa0186190:intron | 35.0% |
| AACCATAGATAATGACATCC+CGG | - | chr2_1:906515-906534 | Msa0186190:intron | 35.0% | |
| AAATGACAAGGTTAGAGTTC+TGG | + | chr2_1:906573-906592 | None:intergenic | 35.0% | |
| TAACCGTAACTCAAATGACA+AGG | + | chr2_1:906585-906604 | None:intergenic | 35.0% | |
| TGTTTGATTAGGTTATCGAC+AGG | - | chr2_1:906658-906677 | Msa0186190:intron | 35.0% | |
| TTCAACATGTGCTGCATTAA+TGG | + | chr2_1:906724-906743 | None:intergenic | 35.0% | |
| !! | CATTGGTGTTGTAAAGCTAA+TGG | - | chr2_1:906764-906783 | Msa0186190:intron | 35.0% |
| AGTAGGGTTCAATTAAACTC+AGG | + | chr2_1:906846-906865 | None:intergenic | 35.0% | |
| !! | GTAATGGATACTATAACTGC+AGG | - | chr2_1:906942-906961 | Msa0186190:intron | 35.0% |
| ACAAAAAGGCTGAAAGAAAG+TGG | - | chr2_1:907071-907090 | Msa0186190:CDS | 35.0% | |
| TATGGTCATAGTTATAGCTG+AGG | - | chr2_1:907097-907116 | Msa0186190:CDS | 35.0% | |
| ATGGTCATAGTTATAGCTGA+GGG | - | chr2_1:907098-907117 | Msa0186190:CDS | 35.0% | |
| AACAAGCTACTTCAAGATGT+TGG | - | chr2_1:907182-907201 | Msa0186190:intron | 35.0% | |
| GTTGTTTGCATATATCTACG+AGG | - | chr2_1:907326-907345 | Msa0186190:intron | 35.0% | |
| TACGAGGAATTAAGAACTCA+AGG | - | chr2_1:907342-907361 | Msa0186190:intron | 35.0% | |
| GATTCATTGATACCCCTATT+TGG | - | chr2_1:907413-907432 | Msa0186190:intron | 35.0% | |
| CGAATAGATCAAAATGGAAG+AGG | + | chr2_1:907858-907877 | None:intergenic | 35.0% | |
| CGTTGTATCTTAGACTACTA+TGG | - | chr2_1:907876-907895 | Msa0186190:intron | 35.0% | |
| CTATGGCTAGATTTCTTAAC+TGG | - | chr2_1:907893-907912 | Msa0186190:intron | 35.0% | |
| TCAGATTATAAAACTGTGCG+AGG | + | chr2_1:908102-908121 | None:intergenic | 35.0% | |
| ATATGCTACTGTTGTTGAGA+TGG | - | chr2_1:908211-908230 | Msa0186190:intron | 35.0% | |
| TTGTGATTACTGACAGAATG+TGG | - | chr2_1:908419-908438 | Msa0186190:intron | 35.0% | |
| TGTGATTACTGACAGAATGT+GGG | - | chr2_1:908420-908439 | Msa0186190:intron | 35.0% | |
| ! | TCTTTGGGTTTCAAAAAGCT+TGG | + | chr2_1:908472-908491 | None:intergenic | 35.0% |
| ! | GAAGTTTTGCTGGAATGATT+AGG | - | chr2_1:908736-908755 | Msa0186190:CDS | 35.0% |
| GGTGTGTCTAATTAAAGTAC+TGG | - | chr2_1:908779-908798 | Msa0186190:CDS | 35.0% | |
| CTTACTCAGCTGATTAAGTT+TGG | - | chr2_1:908903-908922 | Msa0186190:five_prime_UTR | 35.0% | |
| TCACAGATGAAAATCGTCCA+TGG | - | chr2_1:902822-902841 | Msa0186190:three_prime_UTR | 40.0% | |
| ! | AGGAAGATTTGGAACGTAGT+CGG | + | chr2_1:902886-902905 | None:intergenic | 40.0% |
| ! | GGATTAGATCGAAGTGGATT+AGG | + | chr2_1:902998-903017 | None:intergenic | 40.0% |
| ! | TAAGCTGGATTAGATCGAAG+TGG | + | chr2_1:903004-903023 | None:intergenic | 40.0% |
| TCGATCTAATCCAGCTTACT+CGG | - | chr2_1:903006-903025 | Msa0186190:three_prime_UTR | 40.0% | |
| TACTTAACAACCGAGTAAGC+TGG | + | chr2_1:903019-903038 | None:intergenic | 40.0% | |
| ATGCATAGTAAACACGATCG+AGG | + | chr2_1:903245-903264 | None:intergenic | 40.0% | |
| GTGAACAACAACCTATGGAA+AGG | + | chr2_1:903676-903695 | None:intergenic | 40.0% | |
| GTCGAAAATGAACACCTCTT+GGG | + | chr2_1:903707-903726 | None:intergenic | 40.0% | |
| TTTCCCTTATGACAGTGTTG+AGG | + | chr2_1:903904-903923 | None:intergenic | 40.0% | |
| GTCATAAGGGAAATTGTGTG+TGG | - | chr2_1:903911-903930 | Msa0186190:intron | 40.0% | |
| TTTGCACAAGTTTGGAAACC+TGG | - | chr2_1:904215-904234 | Msa0186190:intron | 40.0% | |
| AATGGAAAAGGATATGGTCC+AGG | + | chr2_1:904236-904255 | None:intergenic | 40.0% | |
| TTGGTCATGCCTTTCACAAA+TGG | + | chr2_1:904254-904273 | None:intergenic | 40.0% | |
| ! | TTGTGAAAGGCATGACCAAA+TGG | - | chr2_1:904255-904274 | Msa0186190:intron | 40.0% |
| TTTACACAGGGTGGTTATAG+AGG | - | chr2_1:904471-904490 | Msa0186190:CDS | 40.0% | |
| TGGATGTCATTGACCACTTT+AGG | + | chr2_1:904528-904547 | None:intergenic | 40.0% | |
| !! | ACTGTTTGGGTTATTGGTTC+AGG | - | chr2_1:904772-904791 | Msa0186190:intron | 40.0% |
| CTGCTGTGATTTATGAGGTA+TGG | - | chr2_1:904831-904850 | Msa0186190:intron | 40.0% | |
| TATGAGGTATGGTGATTCAG+AGG | - | chr2_1:904842-904861 | Msa0186190:CDS | 40.0% | |
| !!! | TTACCCTGTTTTTACACGAG+AGG | + | chr2_1:905156-905175 | None:intergenic | 40.0% |
| TCTCGTGTAAAAACAGGGTA+AGG | - | chr2_1:905155-905174 | Msa0186190:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr2_1:905181-905200 | Msa0186190:intron | 40.0% | |
| AGAAAAAACAAGGGAAGGGT+GGG | + | chr2_1:905576-905595 | None:intergenic | 40.0% | |
| AAGAAAAAACAAGGGAAGGG+TGG | + | chr2_1:905577-905596 | None:intergenic | 40.0% | |
| TGGAAATAAGAAAGAACCGG+GGG | + | chr2_1:905750-905769 | None:intergenic | 40.0% | |
| !! | CGGAAGGCATTTGAAGTTTA+AGG | + | chr2_1:905861-905880 | None:intergenic | 40.0% |
| CATAAAGCTTGACCTATCAG+AGG | + | chr2_1:906299-906318 | None:intergenic | 40.0% | |
| CTTTATGTTCAAGGAACAGC+TGG | - | chr2_1:906312-906331 | Msa0186190:intron | 40.0% | |
| TACCGGGATGTCATTATCTA+TGG | + | chr2_1:906520-906539 | None:intergenic | 40.0% | |
| ACATAGAGATTGAGCATACC+GGG | + | chr2_1:906536-906555 | None:intergenic | 40.0% | |
| GACATAGAGATTGAGCATAC+CGG | + | chr2_1:906537-906556 | None:intergenic | 40.0% | |
| TACGGTTACATCTGATGAGT+CGG | - | chr2_1:906597-906616 | Msa0186190:intron | 40.0% | |
| AACTGCGGTATCAAAACCAA+AGG | + | chr2_1:906685-906704 | None:intergenic | 40.0% | |
| !! | GAAGCTGAAAGTGTTGAGAA+TGG | - | chr2_1:906741-906760 | Msa0186190:intron | 40.0% |
| !! | GAAAGTGTTGAGAATGGCAT+TGG | - | chr2_1:906747-906766 | Msa0186190:intron | 40.0% |
| ! | AAGCTAATGGGTCGTTATAG+TGG | - | chr2_1:906777-906796 | Msa0186190:intron | 40.0% |
| TAGTCATTACGTTTGGATGG+AGG | + | chr2_1:906870-906889 | None:intergenic | 40.0% | |
| TACTCTTGCTAGTAGAGATG+TGG | - | chr2_1:906983-907002 | Msa0186190:intron | 40.0% | |
| GCTGAAAGAAAGTGGACATA+TGG | - | chr2_1:907079-907098 | Msa0186190:CDS | 40.0% | |
| ! | TACAGAAAGCATGCAAGACA+TGG | - | chr2_1:907139-907158 | Msa0186190:CDS | 40.0% |
| GAGGAATTAAGAACTCAAGG+AGG | - | chr2_1:907345-907364 | Msa0186190:intron | 40.0% | |
| CAGATCCAACTTACATGATC+CGG | - | chr2_1:907925-907944 | Msa0186190:CDS | 40.0% | |
| AGATCCAACTTACATGATCC+GGG | - | chr2_1:907926-907945 | Msa0186190:CDS | 40.0% | |
| CACAACGTTGTTCATCTTCT+CGG | + | chr2_1:908404-908423 | None:intergenic | 40.0% | |
| !! | ATTCCCACTCAGTTGATAGA+AGG | - | chr2_1:908588-908607 | Msa0186190:intron | 40.0% |
| !! | TTCCCACTCAGTTGATAGAA+GGG | - | chr2_1:908589-908608 | Msa0186190:intron | 40.0% |
| ! | GTGACATGATGAAGTTTTGC+TGG | - | chr2_1:908726-908745 | Msa0186190:intron | 40.0% |
| AGCTGATTAAGTTTGGCACA+AGG | - | chr2_1:908910-908929 | Msa0186190:five_prime_UTR | 40.0% | |
| ! | GAGATTGAGTTGTGTGTTCA+AGG | - | chr2_1:908980-908999 | Msa0186190:five_prime_UTR | 40.0% |
| CAGGCAGTACTTTGTGCATA+TGG | - | chr2_1:903138-903157 | Msa0186190:CDS | 45.0% | |
| CGTCGAAAATGAACACCTCT+TGG | + | chr2_1:903708-903727 | None:intergenic | 45.0% | |
| ! | AGCGAAATAACCTTTTGCCG+AGG | + | chr2_1:903738-903757 | None:intergenic | 45.0% |
| GCTTGTATTGTCACATGTGG+TGG | - | chr2_1:903866-903885 | Msa0186190:intron | 45.0% | |
| ! | TTATGACAGTGTTGAGGCCA+GGG | + | chr2_1:903898-903917 | None:intergenic | 45.0% |
| TGGCCTCAACACTGTCATAA+GGG | - | chr2_1:903898-903917 | Msa0186190:intron | 45.0% | |
| !! | TATGGTGTCGACAAAGTCCT+TGG | - | chr2_1:903947-903966 | Msa0186190:intron | 45.0% |
| GTCAATGACATCCATAAGCG+TGG | - | chr2_1:904534-904553 | Msa0186190:CDS | 45.0% | |
| AATGACATCCATAAGCGTGG+AGG | - | chr2_1:904537-904556 | Msa0186190:CDS | 45.0% | |
| CAAGATAGTTGACAGCATCC+AGG | - | chr2_1:904599-904618 | Msa0186190:CDS | 45.0% | |
| TAGTTGACAGCATCCAGGAT+CGG | - | chr2_1:904604-904623 | Msa0186190:CDS | 45.0% | |
| AGGAGCTGCTGTGATTTATG+AGG | - | chr2_1:904826-904845 | Msa0186190:intron | 45.0% | |
| GTTGTTGTCATGTGACCGTA+AGG | - | chr2_1:905105-905124 | Msa0186190:CDS | 45.0% | |
| GATTTGAACCCGTGACCTTA+CGG | + | chr2_1:905123-905142 | None:intergenic | 45.0% | |
| ACAGCCTCTCGTGTAAAAAC+AGG | - | chr2_1:905149-905168 | Msa0186190:CDS | 45.0% | |
| CAGCCTCTCGTGTAAAAACA+GGG | - | chr2_1:905150-905169 | Msa0186190:CDS | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr2_1:905177-905196 | Msa0186190:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr2_1:905180-905199 | Msa0186190:intron | 45.0% | |
| GATACAGAAAAAGGGCAACC+CGG | + | chr2_1:905247-905266 | None:intergenic | 45.0% | |
| TCAGTGCTATCTCTGTGTGA+GGG | + | chr2_1:905320-905339 | None:intergenic | 45.0% | |
| ATCAGTGCTATCTCTGTGTG+AGG | + | chr2_1:905321-905340 | None:intergenic | 45.0% | |
| AAAAAACAAGGGAAGGGTGG+GGG | + | chr2_1:905574-905593 | None:intergenic | 45.0% | |
| GAAAAAACAAGGGAAGGGTG+GGG | + | chr2_1:905575-905594 | None:intergenic | 45.0% | |
| AAATAAGAAAGAACCGGGGG+GGG | + | chr2_1:905747-905766 | None:intergenic | 45.0% | |
| GAAATAAGAAAGAACCGGGG+GGG | + | chr2_1:905748-905767 | None:intergenic | 45.0% | |
| GGAAATAAGAAAGAACCGGG+GGG | + | chr2_1:905749-905768 | None:intergenic | 45.0% | |
| CTATCATCGCTTGCACTGTT+TGG | + | chr2_1:905770-905789 | None:intergenic | 45.0% | |
| ACTACCTCAGTACCTCTGAT+AGG | - | chr2_1:906284-906303 | Msa0186190:intron | 45.0% | |
| !! | TTGACCTATCAGAGGTACTG+AGG | + | chr2_1:906291-906310 | None:intergenic | 45.0% |
| ATACAGGAAGTTAGACAGCG+AGG | - | chr2_1:906462-906481 | Msa0186190:intron | 45.0% | |
| GGTCTGAAAGTAGCAATTGC+TGG | - | chr2_1:906483-906502 | Msa0186190:intron | 45.0% | |
| TAGGTTATCGACAGGTCCTT+TGG | - | chr2_1:906666-906685 | Msa0186190:intron | 45.0% | |
| !!! | TGGTTTTGATACCGCAGTTG+AGG | - | chr2_1:906686-906705 | Msa0186190:intron | 45.0% |
| ! | TTTTGATACCGCAGTTGAGG+AGG | - | chr2_1:906689-906708 | Msa0186190:intron | 45.0% |
| ACGTTTGGATGGAGGAAGTA+GGG | + | chr2_1:906862-906881 | None:intergenic | 45.0% | |
| TACGTTTGGATGGAGGAAGT+AGG | + | chr2_1:906863-906882 | None:intergenic | 45.0% | |
| AGTCACCCTTCTACCTTGAA+GGG | - | chr2_1:907024-907043 | Msa0186190:CDS | 45.0% | |
| ATAGTTATAGCTGAGGGAGC+AGG | - | chr2_1:907104-907123 | Msa0186190:CDS | 45.0% | |
| !! | TGTTTCCAGAAGCATCCTTC+TGG | + | chr2_1:907166-907185 | None:intergenic | 45.0% |
| ! | CGGATCATGTAAGTTGGATC+TGG | + | chr2_1:907927-907946 | None:intergenic | 45.0% |
| ATTGCCCGGATCATGTAAGT+TGG | + | chr2_1:907933-907952 | None:intergenic | 45.0% | |
| ATGCATTGCTTGGAATTGCC+CGG | + | chr2_1:907947-907966 | None:intergenic | 45.0% | |
| ACACTGTCTGATGCATTGCT+TGG | + | chr2_1:907957-907976 | None:intergenic | 45.0% | |
| TTCACTGCTGGACTTGTGAA+TGG | - | chr2_1:908035-908054 | Msa0186190:intron | 45.0% | |
| CATCTTCTCGGTGATTCTCT+GGG | + | chr2_1:908392-908411 | None:intergenic | 45.0% | |
| TCATCTTCTCGGTGATTCTC+TGG | + | chr2_1:908393-908412 | None:intergenic | 45.0% | |
| TGGGTTTCAAAAAGCTTGGC+TGG | + | chr2_1:908468-908487 | None:intergenic | 45.0% | |
| TCCCTGACTCAGTTGTTAGA+AGG | - | chr2_1:908520-908539 | Msa0186190:intron | 45.0% | |
| CCCTTCTAACAACTGAGTCA+GGG | + | chr2_1:908524-908543 | None:intergenic | 45.0% | |
| CCCTGACTCAGTTGTTAGAA+GGG | - | chr2_1:908521-908540 | Msa0186190:intron | 45.0% | |
| TCCCTTCTAACAACTGAGTC+AGG | + | chr2_1:908525-908544 | None:intergenic | 45.0% | |
| GAAGGGAGCAATTGCAATGT+TGG | - | chr2_1:908538-908557 | Msa0186190:intron | 45.0% | |
| !! | TCCCACTCAGTTGATAGAAG+GGG | - | chr2_1:908590-908609 | Msa0186190:intron | 45.0% |
| TCCCCTTCTATCAACTGAGT+GGG | + | chr2_1:908594-908613 | None:intergenic | 45.0% | |
| GTAAGAGACTGCTTGTGTGA+AGG | + | chr2_1:908888-908907 | None:intergenic | 45.0% | |
| GGATGACACCGTTCCTCAAA+AGG | - | chr2_1:903159-903178 | Msa0186190:CDS | 50.0% | |
| GTTCACAAAGATGGCCCAAG+AGG | - | chr2_1:903690-903709 | Msa0186190:CDS | 50.0% | |
| ! | GGTGTTCATTTTCGACGTGC+AGG | - | chr2_1:903711-903730 | Msa0186190:intron | 50.0% |
| ! | ATTTTCGACGTGCAGGACCT+CGG | - | chr2_1:903718-903737 | Msa0186190:intron | 50.0% |
| ! | CTTATGACAGTGTTGAGGCC+AGG | + | chr2_1:903899-903918 | None:intergenic | 50.0% |
| CTGGCCTCAACACTGTCATA+AGG | - | chr2_1:903897-903916 | Msa0186190:intron | 50.0% | |
| GTCCTTGGCATAGATGTGAG+TGG | - | chr2_1:903962-903981 | Msa0186190:intron | 50.0% | |
| AGCCACTCACATCTATGCCA+AGG | + | chr2_1:903967-903986 | None:intergenic | 50.0% | |
| TGCACAGTCTGATGTGTGCT+AGG | - | chr2_1:904041-904060 | Msa0186190:intron | 50.0% | |
| CAGTCTGATGTGTGCTAGGA+AGG | - | chr2_1:904045-904064 | Msa0186190:intron | 50.0% | |
| GCGTGCTCTTTGCACAAGTT+TGG | - | chr2_1:904207-904226 | Msa0186190:intron | 50.0% | |
| GAATCGTTCCTCCACGCTTA+TGG | + | chr2_1:904548-904567 | None:intergenic | 50.0% | |
| AAGCGTGGAGGAACGATTCT+TGG | - | chr2_1:904549-904568 | Msa0186190:CDS | 50.0% | |
| AGCGTGGAGGAACGATTCTT+GGG | - | chr2_1:904550-904569 | Msa0186190:CDS | 50.0% | |
| AGTTGACAGCATCCAGGATC+GGG | - | chr2_1:904605-904624 | Msa0186190:CDS | 50.0% | |
| CCTGATTAATTCCCCGATCC+TGG | + | chr2_1:904620-904639 | None:intergenic | 50.0% | |
| CCAGGATCGGGGAATTAATC+AGG | - | chr2_1:904617-904636 | Msa0186190:CDS | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr2_1:905089-905108 | None:intergenic | 50.0% | |
| GTCATGTGACCGTAAGGTCA+CGG | - | chr2_1:905111-905130 | Msa0186190:CDS | 50.0% | |
| TCATGTGACCGTAAGGTCAC+GGG | - | chr2_1:905112-905131 | Msa0186190:CDS | 50.0% | |
| AAGGTCACGGGTTCAAATCC+TGG | - | chr2_1:905124-905143 | Msa0186190:CDS | 50.0% | |
| ! | TTACACGAGAGGCTGTTTCC+AGG | + | chr2_1:905145-905164 | None:intergenic | 50.0% |
| CTAAAGCTCCCGCATATGCA+GGG | + | chr2_1:905220-905239 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | + | chr2_1:905221-905240 | None:intergenic | 50.0% | |
| AATAAGAAAGAACCGGGGGG+GGG | + | chr2_1:905746-905765 | None:intergenic | 50.0% | |
| TCAAGGTAGAAGGGTGACTC+TGG | + | chr2_1:907023-907042 | None:intergenic | 50.0% | |
| GAGTCACCCTTCTACCTTGA+AGG | - | chr2_1:907023-907042 | Msa0186190:CDS | 50.0% | |
| ACCCTTCTACCTTGAAGGGA+AGG | - | chr2_1:907028-907047 | Msa0186190:CDS | 50.0% | |
| CCCTTCCCTTCAAGGTAGAA+GGG | + | chr2_1:907032-907051 | None:intergenic | 50.0% | |
| CCCTTCTACCTTGAAGGGAA+GGG | - | chr2_1:907029-907048 | Msa0186190:CDS | 50.0% | |
| ACCCTTCCCTTCAAGGTAGA+AGG | + | chr2_1:907033-907052 | None:intergenic | 50.0% | |
| TTCTACCTTGAAGGGAAGGG+TGG | - | chr2_1:907032-907051 | Msa0186190:CDS | 50.0% | |
| AAAGTCCACCCTTCCCTTCA+AGG | + | chr2_1:907040-907059 | None:intergenic | 50.0% | |
| CATGCAAGACATGGACCAGA+AGG | - | chr2_1:907148-907167 | Msa0186190:intron | 50.0% | |
| ATGGACCAGAAGGATGCTTC+TGG | - | chr2_1:907158-907177 | Msa0186190:intron | 50.0% | |
| GTGCATTGAGTGGTATGCAG+AGG | + | chr2_1:907593-907612 | None:intergenic | 50.0% | |
| CTTGCTCAGAGTGCAGTTCA+TGG | - | chr2_1:907990-908009 | Msa0186190:intron | 50.0% | |
| GAGTGCAGTTCATGGTGCAA+TGG | - | chr2_1:907998-908017 | Msa0186190:intron | 50.0% | |
| CAGTTCATGGTGCAATGGCT+GGG | - | chr2_1:908003-908022 | Msa0186190:intron | 50.0% | |
| GGGTATACTGGATTCACTGC+TGG | - | chr2_1:908023-908042 | Msa0186190:intron | 50.0% | |
| GTCCCCTTCTATCAACTGAG+TGG | + | chr2_1:908595-908614 | None:intergenic | 50.0% | |
| AAAATCGTCCATGGCGACGC+TGG | - | chr2_1:902831-902850 | Msa0186190:three_prime_UTR | 55.0% | |
| GTATGTAACCAGCGTCGCCA+TGG | + | chr2_1:902842-902861 | None:intergenic | 55.0% | |
| GGAACGTAGTCGGAGAGATG+AGG | + | chr2_1:902876-902895 | None:intergenic | 55.0% | |
| ACGATTCTTGGGACATCCCG+AGG | - | chr2_1:904561-904580 | Msa0186190:CDS | 55.0% | |
| CGATTCTTGGGACATCCCGA+GGG | - | chr2_1:904562-904581 | Msa0186190:CDS | 55.0% | |
| GATTCTTGGGACATCCCGAG+GGG | - | chr2_1:904563-904582 | Msa0186190:CDS | 55.0% | |
| ATTCTTGGGACATCCCGAGG+GGG | - | chr2_1:904564-904583 | Msa0186190:CDS | 55.0% | |
| GTTGACAGCATCCAGGATCG+GGG | - | chr2_1:904606-904625 | Msa0186190:CDS | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr2_1:905225-905244 | Msa0186190:intron | 55.0% |
| GGGCAGCGAACATGACAATG+CGG | + | chr2_1:905709-905728 | None:intergenic | 55.0% | |
| ATAAGAAAGAACCGGGGGGG+GGG | + | chr2_1:905745-905764 | None:intergenic | 55.0% | |
| ACGTTGAGCCTCCTCAACTG+CGG | + | chr2_1:906700-906719 | None:intergenic | 55.0% | |
| GAGGAGCTCTCACCAACTAC+AGG | - | chr2_1:907364-907383 | Msa0186190:intron | 55.0% | |
| GCAGTTCATGGTGCAATGGC+TGG | - | chr2_1:908002-908021 | Msa0186190:intron | 55.0% | |
| GGTGCAATGGCTGGGTATAC+TGG | - | chr2_1:908011-908030 | Msa0186190:intron | 55.0% | |
| TGCAACTGTCACTGTCAGCG+AGG | + | chr2_1:908647-908666 | None:intergenic | 55.0% | |
| CCAGACCCACCTTGACACGT+CGG | - | chr2_1:902583-902602 | Msa0186190:three_prime_UTR | 60.0% | |
| CTCTGCCGACGTGTCAAGGT+GGG | + | chr2_1:902591-902610 | None:intergenic | 60.0% | |
| TCTGCTCTGCCGACGTGTCA+AGG | + | chr2_1:902595-902614 | None:intergenic | 60.0% | |
| ACGTGCAGGACCTCGGCAAA+AGG | - | chr2_1:903725-903744 | Msa0186190:intron | 60.0% | |
| ACATGTGGTGGTCTCTGCCC+TGG | - | chr2_1:903878-903897 | Msa0186190:intron | 60.0% | |
| TTCTTGGGACATCCCGAGGG+GGG | - | chr2_1:904565-904584 | Msa0186190:CDS | 60.0% | |
| TGCCAGTATCATGCCCCCCT+CGG | + | chr2_1:904581-904600 | None:intergenic | 60.0% | |
| GGAGGAGATGGAACACAGCG+AGG | - | chr2_1:904806-904825 | Msa0186190:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr2_1:905078-905097 | Msa0186190:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr2_1:905193-905212 | Msa0186190:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr2_1:905208-905227 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr2_1:905209-905228 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr2_1:905208-905227 | Msa0186190:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr2_1:905209-905228 | Msa0186190:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr2_1:905226-905245 | Msa0186190:intron | 60.0% |
| TAAGAAAGAACCGGGGGGGG+GGG | + | chr2_1:905744-905763 | None:intergenic | 60.0% | |
| GTGGGTCTGGACCGTTCGTG+TGG | + | chr2_1:902573-902592 | None:intergenic | 65.0% | |
| CCGACGTGTCAAGGTGGGTC+TGG | + | chr2_1:902586-902605 | None:intergenic | 65.0% | |
| GCTCTGCCGACGTGTCAAGG+TGG | + | chr2_1:902592-902611 | None:intergenic | 65.0% | |
| ! | TCCCGAGGGGGGCATGATAC+TGG | - | chr2_1:904576-904595 | Msa0186190:CDS | 65.0% |
| GCCAGTATCATGCCCCCCTC+GGG | + | chr2_1:904580-904599 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr2_1:905195-905214 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr2_1:905210-905229 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr2_1:905214-905233 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr2_1:905215-905234 | None:intergenic | 65.0% | |
| AAGAAAGAACCGGGGGGGGG+GGG | + | chr2_1:905743-905762 | None:intergenic | 65.0% | |
| AGAAAGAACCGGGGGGGGGG+GGG | + | chr2_1:905742-905761 | None:intergenic | 70.0% | |
| AAAGAACCGGGGGGGGGGGG+GGG | + | chr2_1:905740-905759 | None:intergenic | 75.0% | |
| GAAAGAACCGGGGGGGGGGG+GGG | + | chr2_1:905741-905760 | None:intergenic | 75.0% | |
| ! | AAGAACCGGGGGGGGGGGGG+GGG | + | chr2_1:905739-905758 | None:intergenic | 80.0% |
| ! | AGAACCGGGGGGGGGGGGGG+GGG | + | chr2_1:905738-905757 | None:intergenic | 85.0% |
| ! | AACCGGGGGGGGGGGGGGGG+GGG | + | chr2_1:905736-905755 | None:intergenic | 90.0% |
| ! | GAACCGGGGGGGGGGGGGGG+GGG | + | chr2_1:905737-905756 | None:intergenic | 90.0% |
| ! | ACCGGGGGGGGGGGGGGGGG+GGG | + | chr2_1:905735-905754 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 902567 | 909073 | 902567 | ID=Msa0186190;Name=Msa0186190 |
| chr2_1 | mRNA | 902567 | 909073 | 902567 | ID=Msa0186190-mRNA-1;Parent=Msa0186190;Name=Msa0186190-mRNA-1;_AED=0.12;_eAED=0.12;_QI=234|1|1|1|1|1|13|491|487 |
| chr2_1 | exon | 902567 | 903246 | 902567 | ID=Msa0186190-mRNA-1:exon:346;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 903558 | 903712 | 903558 | ID=Msa0186190-mRNA-1:exon:345;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 903806 | 903854 | 903806 | ID=Msa0186190-mRNA-1:exon:344;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 904411 | 904676 | 904411 | ID=Msa0186190-mRNA-1:exon:343;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 904842 | 904971 | 904842 | ID=Msa0186190-mRNA-1:exon:342;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 905104 | 905172 | 905104 | ID=Msa0186190-mRNA-1:exon:341;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 906793 | 906846 | 906793 | ID=Msa0186190-mRNA-1:exon:340;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 907002 | 907160 | 907002 | ID=Msa0186190-mRNA-1:exon:339;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 907664 | 907801 | 907664 | ID=Msa0186190-mRNA-1:exon:338;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 907894 | 907956 | 907894 | ID=Msa0186190-mRNA-1:exon:337;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 908460 | 908499 | 908460 | ID=Msa0186190-mRNA-1:exon:336;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 908605 | 908651 | 908605 | ID=Msa0186190-mRNA-1:exon:335;Parent=Msa0186190-mRNA-1 |
| chr2_1 | exon | 908735 | 909073 | 908735 | ID=Msa0186190-mRNA-1:exon:334;Parent=Msa0186190-mRNA-1 |
| chr2_1 | five_prime_UTR | 908840 | 909073 | 908840 | ID=Msa0186190-mRNA-1:five_prime_utr;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 908735 | 908839 | 908735 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 908605 | 908651 | 908605 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 908460 | 908499 | 908460 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 907894 | 907956 | 907894 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 907664 | 907801 | 907664 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 907002 | 907160 | 907002 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 906793 | 906846 | 906793 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 905104 | 905172 | 905104 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 904842 | 904971 | 904842 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 904411 | 904676 | 904411 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 903806 | 903854 | 903806 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 903558 | 903712 | 903558 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | CDS | 903058 | 903246 | 903058 | ID=Msa0186190-mRNA-1:cds;Parent=Msa0186190-mRNA-1 |
| chr2_1 | three_prime_UTR | 902567 | 903057 | 902567 | ID=Msa0186190-mRNA-1:three_prime_utr;Parent=Msa0186190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
