Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522290 | XP_013462064.1 | 98.266 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1057 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522290 | sp|Q94AA4|PFKA3_ARATH | 81.211 | 479 | 86 | 3 | 1 | 479 | 1 | 475 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522290 | A0A072V223 | 98.266 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1057 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0186190 | Msa0522290 | 0.961849 | 3.512365e-120 | -8.615850e-47 |
| Msa0384590 | Msa0522290 | 0.800089 | 1.697376e-48 | -8.615850e-47 |
| Msa0478130 | Msa0522290 | 0.874000 | 9.502428e-68 | -8.615850e-47 |
| Msa0478190 | Msa0522290 | 0.850824 | 1.322911e-60 | -8.615850e-47 |
| Msa0522290 | Msa0958830 | 0.802769 | 4.794512e-49 | -8.615850e-47 |
| Msa0522290 | Msa0970040 | 0.802130 | 6.490462e-49 | -8.615850e-47 |
| Msa0522290 | Msa1146980 | 0.804724 | 1.883137e-49 | -8.615850e-47 |
| Msa0522290 | Msa1197720 | 0.831199 | 1.911168e-55 | -8.615850e-47 |
| Msa0522290 | Msa1452560 | -0.800493 | 1.404213e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522290 | MtrunA17_Chr3g0140611 | 98.266 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1057 |
| Msa0522290 | MtrunA17_Chr6g0487421 | 81.838 | 468 | 85 | 0 | 8 | 475 | 4 | 471 | 0.0 | 814 |
| Msa0522290 | MtrunA17_Chr8g0389631 | 81.978 | 455 | 81 | 1 | 4 | 457 | 3 | 457 | 0.0 | 794 |
| Msa0522290 | MtrunA17_Chr2g0330871 | 76.169 | 449 | 105 | 2 | 19 | 466 | 18 | 465 | 0.0 | 717 |
| Msa0522290 | MtrunA17_Chr1g0196891 | 72.383 | 449 | 123 | 1 | 16 | 464 | 82 | 529 | 0.0 | 700 |
| Msa0522290 | MtrunA17_Chr4g0076591 | 50.457 | 438 | 189 | 6 | 21 | 455 | 27 | 439 | 1.67e-151 | 440 |
| Msa0522290 | MtrunA17_Chr8g0367681 | 53.704 | 378 | 167 | 4 | 79 | 454 | 158 | 529 | 2.14e-134 | 400 |
| Msa0522290 | MtrunA17_Chr5g0412481 | 51.979 | 379 | 174 | 4 | 78 | 454 | 161 | 533 | 1.03e-131 | 393 |
| Msa0522290 | MtrunA17_Chr4g0030501 | 64.815 | 54 | 19 | 0 | 356 | 409 | 8 | 61 | 1.04e-17 | 78.2 |
| Msa0522290 | MtrunA17_Chr2g0289271 | 26.842 | 190 | 132 | 3 | 97 | 279 | 98 | 287 | 1.51e-11 | 67.0 |
| Msa0522290 | MtrunA17_Chr4g0075371 | 27.083 | 192 | 129 | 3 | 97 | 279 | 102 | 291 | 1.91e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522290 | AT4G26270.1 | 81.211 | 479 | 86 | 3 | 1 | 479 | 1 | 475 | 0.0 | 818 |
| Msa0522290 | AT5G56630.1 | 81.013 | 474 | 86 | 4 | 1 | 474 | 1 | 470 | 0.0 | 795 |
| Msa0522290 | AT4G29220.1 | 82.571 | 459 | 77 | 2 | 1 | 458 | 1 | 457 | 0.0 | 792 |
| Msa0522290 | AT4G32840.1 | 81.798 | 456 | 80 | 1 | 1 | 456 | 1 | 453 | 0.0 | 790 |
| Msa0522290 | AT5G61580.1 | 75.854 | 439 | 106 | 0 | 16 | 454 | 66 | 504 | 0.0 | 721 |
| Msa0522290 | AT5G61580.2 | 75.854 | 439 | 105 | 1 | 16 | 454 | 66 | 503 | 0.0 | 716 |
| Msa0522290 | AT5G47810.1 | 55.263 | 418 | 184 | 2 | 39 | 453 | 21 | 438 | 3.83e-167 | 480 |
| Msa0522290 | AT2G22480.1 | 53.968 | 378 | 166 | 4 | 79 | 454 | 166 | 537 | 4.13e-138 | 410 |
| Msa0522290 | AT4G04040.1 | 27.670 | 206 | 141 | 4 | 82 | 279 | 86 | 291 | 2.36e-12 | 69.7 |
| Msa0522290 | AT1G12000.1 | 27.083 | 192 | 129 | 3 | 97 | 279 | 100 | 289 | 4.32e-11 | 65.9 |
Find 141 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCCACCAAATACAATTT+TGG | 0.181586 | 3_4:-75357180 | None:intergenic |
| TACTTCAAGATGTTGGTTTA+TGG | 0.202635 | 3_4:+75355668 | Msa0522290:CDS |
| TTCAACATGTGCTGCATTAA+TGG | 0.206437 | 3_4:-75355200 | None:intergenic |
| CTTTATTTGATGAACATCTT+TGG | 0.232102 | 3_4:-75356965 | None:intergenic |
| TTGTATTCCAAAATTGTATT+TGG | 0.240105 | 3_4:+75357173 | Msa0522290:three_prime_UTR |
| TTTATGAATTTATTACAAAA+AGG | 0.275122 | 3_4:+75355536 | Msa0522290:CDS |
| GAATCGTTCCTCCACGCTTA+TGG | 0.286336 | 3_4:-75353019 | None:intergenic |
| TTTATTTGATGAACATCTTT+GGG | 0.300163 | 3_4:-75356964 | None:intergenic |
| TACCGGGATGTCATTATCTA+TGG | 0.300219 | 3_4:-75354996 | None:intergenic |
| CTTACTCAGCTGATTAAGTT+TGG | 0.303852 | 3_4:+75357384 | Msa0522290:three_prime_UTR |
| TGGATGTCATTGACCACTTT+AGG | 0.304572 | 3_4:-75352999 | None:intergenic |
| TTGGTTCAGGTTTATATCAT+TGG | 0.329391 | 3_4:+75353259 | Msa0522290:intron |
| TGTTTCCAGAAGCATCCTTC+TGG | 0.336049 | 3_4:-75355642 | None:intergenic |
| CAGGCAGTACTTTGTGCATA+TGG | 0.344963 | 3_4:+75351612 | Msa0522290:intron |
| CTTGCTCAGAGTGCAGTTCA+TGG | 0.350658 | 3_4:+75356470 | Msa0522290:CDS |
| ACCCTTCCCTTCAAGGTAGA+AGG | 0.353106 | 3_4:-75355509 | None:intergenic |
| GGTGCAATGGCTGGGTATAC+TGG | 0.356523 | 3_4:+75356491 | Msa0522290:CDS |
| CACAACGTTGTTCATCTTCT+CGG | 0.359054 | 3_4:-75356881 | None:intergenic |
| AAGCGTGGAGGAACGATTCT+TGG | 0.367428 | 3_4:+75353023 | Msa0522290:CDS |
| GGATTAGATCGAAGTGGATT+AGG | 0.375412 | 3_4:-75351469 | None:intergenic |
| GCCATTGTTCTTAAATATAT+AGG | 0.384279 | 3_4:+75356293 | Msa0522290:CDS |
| AAAGTCCACCCTTCCCTTCA+AGG | 0.386654 | 3_4:-75355516 | None:intergenic |
| ATCTAGTAACTTACGTTGAA+TGG | 0.388848 | 3_4:-75356554 | None:intergenic |
| TCCCTTCTAACAACTGAGTC+AGG | 0.397166 | 3_4:-75357002 | None:intergenic |
| TCCCTGACTCAGTTGTTAGA+AGG | 0.398852 | 3_4:+75357000 | Msa0522290:CDS |
| TGTGGTCTTTCTTACATGTA+TGG | 0.400190 | 3_4:+75352403 | Msa0522290:CDS |
| CATTGGTGTTGTAAAGCTAA+TGG | 0.401351 | 3_4:+75355243 | Msa0522290:CDS |
| CGTCGAAAATGAACACCTCT+TGG | 0.402495 | 3_4:-75352179 | None:intergenic |
| CCTGATTAATTCCCCGATCC+TGG | 0.409242 | 3_4:-75353091 | None:intergenic |
| TTCATATAATGAAGTTTCAT+AGG | 0.409709 | 3_4:+75357284 | Msa0522290:three_prime_UTR |
| TAGGTTATCGACAGGTCCTT+TGG | 0.411323 | 3_4:+75355145 | Msa0522290:intron |
| CTAAAACTCTTGTAGAGATA+AGG | 0.411411 | 3_4:-75357488 | None:intergenic |
| ATTCCCACTCAGTTGATAGA+AGG | 0.412182 | 3_4:+75357069 | Msa0522290:CDS |
| AGTTGACAGCATCCAGGATC+GGG | 0.419001 | 3_4:+75353079 | Msa0522290:CDS |
| CCGACGTGTCAAGGTGGGTC+TGG | 0.421637 | 3_4:-75351056 | None:intergenic |
| TATTCCAAAATTGTATTTGG+TGG | 0.424483 | 3_4:+75357176 | Msa0522290:three_prime_UTR |
| TTTACACAGGGTGGTTATAG+AGG | 0.429359 | 3_4:+75352945 | Msa0522290:intron |
| GCAGTTCATGGTGCAATGGC+TGG | 0.433123 | 3_4:+75356482 | Msa0522290:CDS |
| CCAGGATCGGGGAATTAATC+AGG | 0.433988 | 3_4:+75353091 | Msa0522290:CDS |
| GGGTATACTGGATTCACTGC+TGG | 0.434313 | 3_4:+75356503 | Msa0522290:CDS |
| TAGGTTGTTGTTCACAAAGA+TGG | 0.437604 | 3_4:+75352155 | Msa0522290:intron |
| GAGTCACCCTTCTACCTTGA+AGG | 0.442197 | 3_4:+75355502 | Msa0522290:CDS |
| GAGATTGAGTTGTGTGTTCA+AGG | 0.444965 | 3_4:+75357461 | Msa0522290:three_prime_UTR |
| CAGATCCAACTTACATGATC+CGG | 0.445131 | 3_4:+75356405 | Msa0522290:intron |
| AATGAAAGAAATAAGAAGAA+AGG | 0.446797 | 3_4:-75351165 | None:intergenic |
| ACATGTGGTGGTCTCTGCCC+TGG | 0.450770 | 3_4:+75352352 | Msa0522290:CDS |
| CTGGCCTCAACACTGTCATA+AGG | 0.454068 | 3_4:+75352371 | Msa0522290:CDS |
| ATGGACCAGAAGGATGCTTC+TGG | 0.455785 | 3_4:+75355637 | Msa0522290:CDS |
| GGTGTGTCTAATTAAAGTAC+TGG | 0.459268 | 3_4:+75357260 | Msa0522290:three_prime_UTR |
| GATTCTTTAGAGTAAAGAAA+TGG | 0.464742 | 3_4:+75351255 | Msa0522290:exon |
| TGGCCTCAACACTGTCATAA+GGG | 0.467515 | 3_4:+75352372 | Msa0522290:CDS |
| GTTTATATCATTGGAGGAGA+TGG | 0.470046 | 3_4:+75353268 | Msa0522290:CDS |
| GAAGGGAGCAATTGCAATGT+TGG | 0.471533 | 3_4:+75357018 | Msa0522290:CDS |
| CTCTGCCGACGTGTCAAGGT+GGG | 0.473413 | 3_4:-75351061 | None:intergenic |
| AACAAGCTACTTCAAGATGT+TGG | 0.473799 | 3_4:+75355661 | Msa0522290:CDS |
| TCTGCTCTGCCGACGTGTCA+AGG | 0.473921 | 3_4:-75351065 | None:intergenic |
| GGATGACACCGTTCCTCAAA+AGG | 0.474449 | 3_4:+75351633 | Msa0522290:CDS |
| CTTATGACAGTGTTGAGGCC+AGG | 0.477976 | 3_4:-75352370 | None:intergenic |
| TTCACTGCTGGACTTGTGAA+TGG | 0.485445 | 3_4:+75356515 | Msa0522290:CDS |
| AGCGTGGAGGAACGATTCTT+GGG | 0.486903 | 3_4:+75353024 | Msa0522290:CDS |
| ACGTGCAGGACCTCGGCAAA+AGG | 0.487268 | 3_4:+75352199 | Msa0522290:CDS |
| TACTTAACAACCGAGTAAGC+TGG | 0.487814 | 3_4:-75351490 | None:intergenic |
| GCTGAAAGAAAGTGGACATA+TGG | 0.488751 | 3_4:+75355558 | Msa0522290:CDS |
| GGTCTGAAAGTAGCAATTGC+TGG | 0.489039 | 3_4:+75354962 | Msa0522290:CDS |
| TCAAGGTAGAAGGGTGACTC+TGG | 0.491308 | 3_4:-75355499 | None:intergenic |
| TAAGAAGAAAGGAAAGAGAG+TGG | 0.492010 | 3_4:-75351154 | None:intergenic |
| CATTACTTTAACTCCTAAAG+TGG | 0.494917 | 3_4:+75352986 | Msa0522290:CDS |
| AAGCTAATGGGTCGTTATAG+TGG | 0.497189 | 3_4:+75355256 | Msa0522290:CDS |
| TCGATCTAATCCAGCTTACT+CGG | 0.498259 | 3_4:+75351480 | Msa0522290:CDS |
| GTTCAGGTTTATATCATTGG+AGG | 0.500202 | 3_4:+75353262 | Msa0522290:intron |
| GTCGAAAATGAACACCTCTT+GGG | 0.504803 | 3_4:-75352178 | None:intergenic |
| TTATGACAGTGTTGAGGCCA+GGG | 0.506099 | 3_4:-75352369 | None:intergenic |
| AAAATCGTCCATGGCGACGC+TGG | 0.506999 | 3_4:+75351304 | Msa0522290:CDS |
| TCAAGAAATAAAATTAGATA+AGG | 0.522244 | 3_4:+75357148 | Msa0522290:exon |
| ATGCATTGCTTGGAATTGCC+CGG | 0.523008 | 3_4:-75356424 | None:intergenic |
| ATTGGTGTTGTAAAGCTAAT+GGG | 0.524626 | 3_4:+75355244 | Msa0522290:CDS |
| TATGGTGTCGACAAAGTCCT+TGG | 0.526674 | 3_4:+75352421 | Msa0522290:CDS |
| TGTTTGATTAGGTTATCGAC+AGG | 0.526843 | 3_4:+75355137 | Msa0522290:intron |
| ACACTGTCTGATGCATTGCT+TGG | 0.537565 | 3_4:-75356434 | None:intergenic |
| ATGGATATCTCATAAGATCA+AGG | 0.539762 | 3_4:+75355687 | Msa0522290:CDS |
| CCCTGACTCAGTTGTTAGAA+GGG | 0.543143 | 3_4:+75357001 | Msa0522290:CDS |
| ACCCTTCTACCTTGAAGGGA+AGG | 0.543653 | 3_4:+75355507 | Msa0522290:CDS |
| AGGAGCTGCTGTGATTTATG+AGG | 0.550657 | 3_4:+75353300 | Msa0522290:CDS |
| CCCTTCCCTTCAAGGTAGAA+GGG | 0.551850 | 3_4:-75355508 | None:intergenic |
| TAGTTGACAGCATCCAGGAT+CGG | 0.553341 | 3_4:+75353078 | Msa0522290:CDS |
| ATTGCCCGGATCATGTAAGT+TGG | 0.554329 | 3_4:-75356410 | None:intergenic |
| CAAGATAGTTGACAGCATCC+AGG | 0.555399 | 3_4:+75353073 | Msa0522290:CDS |
| TTCCCACTCAGTTGATAGAA+GGG | 0.555630 | 3_4:+75357070 | Msa0522290:CDS |
| ACGATTCTTGGGACATCCCG+AGG | 0.556156 | 3_4:+75353035 | Msa0522290:CDS |
| ATAGTTATAGCTGAGGGAGC+AGG | 0.560671 | 3_4:+75355583 | Msa0522290:CDS |
| AGATCCAACTTACATGATCC+GGG | 0.560914 | 3_4:+75356406 | Msa0522290:intron |
| AACCATAGATAATGACATCC+CGG | 0.563261 | 3_4:+75354994 | Msa0522290:CDS |
| CATGCAAGACATGGACCAGA+AGG | 0.565078 | 3_4:+75355627 | Msa0522290:CDS |
| CACTTTAGGAGTTAAAGTAA+TGG | 0.565776 | 3_4:-75352985 | None:intergenic |
| CGATTCTTGGGACATCCCGA+GGG | 0.578094 | 3_4:+75353036 | Msa0522290:CDS |
| GTATGTAACCAGCGTCGCCA+TGG | 0.578458 | 3_4:-75351312 | None:intergenic |
| TACAGAAAGCATGCAAGACA+TGG | 0.580338 | 3_4:+75355618 | Msa0522290:CDS |
| AGTCACCCTTCTACCTTGAA+GGG | 0.585876 | 3_4:+75355503 | Msa0522290:CDS |
| CAGTTCATGGTGCAATGGCT+GGG | 0.590436 | 3_4:+75356483 | Msa0522290:CDS |
| GTGGGTCTGGACCGTTCGTG+TGG | 0.590502 | 3_4:-75351043 | None:intergenic |
| ACCTATATATTTAAGAACAA+TGG | 0.594094 | 3_4:-75356294 | None:intergenic |
| GCTTGTATTGTCACATGTGG+TGG | 0.594598 | 3_4:+75352340 | Msa0522290:CDS |
| CCCTTCTACCTTGAAGGGAA+GGG | 0.594930 | 3_4:+75355508 | Msa0522290:CDS |
| TTCTACCTTGAAGGGAAGGG+TGG | 0.595567 | 3_4:+75355511 | Msa0522290:CDS |
| TTGTGATTACTGACAGAATG+TGG | 0.596485 | 3_4:+75356899 | Msa0522290:CDS |
| GCTCTGCCGACGTGTCAAGG+TGG | 0.602525 | 3_4:-75351062 | None:intergenic |
| TCCCCTTCTATCAACTGAGT+GGG | 0.604482 | 3_4:-75357072 | None:intergenic |
| AGGAAGATTTGGAACGTAGT+CGG | 0.608157 | 3_4:-75351356 | None:intergenic |
| GTCAATGACATCCATAAGCG+TGG | 0.610080 | 3_4:+75353008 | Msa0522290:CDS |
| CCTCCATCTCTCCACACGAA+CGG | 0.611839 | 3_4:+75351032 | None:intergenic |
| TTCTTGGGACATCCCGAGGG+GGG | 0.614995 | 3_4:+75353039 | Msa0522290:CDS |
| GAAAGTGTTGAGAATGGCAT+TGG | 0.625093 | 3_4:+75355226 | Msa0522290:CDS |
| TTTCCCTTATGACAGTGTTG+AGG | 0.626794 | 3_4:-75352375 | None:intergenic |
| AGCCACTCACATCTATGCCA+AGG | 0.627188 | 3_4:-75352438 | None:intergenic |
| GAGTGCAGTTCATGGTGCAA+TGG | 0.628896 | 3_4:+75356478 | Msa0522290:CDS |
| ATTCTTGGGACATCCCGAGG+GGG | 0.629130 | 3_4:+75353038 | Msa0522290:CDS |
| TCACAGATGAAAATCGTCCA+TGG | 0.630554 | 3_4:+75351295 | Msa0522290:CDS |
| ATTGCTTGTATTGTCACATG+TGG | 0.630601 | 3_4:+75352337 | Msa0522290:CDS |
| ATGGTCATAGTTATAGCTGA+GGG | 0.632087 | 3_4:+75355577 | Msa0522290:CDS |
| CCCTTCTAACAACTGAGTCA+GGG | 0.632890 | 3_4:-75357001 | None:intergenic |
| AACTGCGGTATCAAAACCAA+AGG | 0.633694 | 3_4:-75355161 | None:intergenic |
| GTCCCCTTCTATCAACTGAG+TGG | 0.636892 | 3_4:-75357073 | None:intergenic |
| TATGGTCATAGTTATAGCTG+AGG | 0.638112 | 3_4:+75355576 | Msa0522290:CDS |
| AGCTGATTAAGTTTGGCACA+AGG | 0.638717 | 3_4:+75357391 | Msa0522290:three_prime_UTR |
| GGAACGTAGTCGGAGAGATG+AGG | 0.638776 | 3_4:-75351346 | None:intergenic |
| GAAGCTGAAAGTGTTGAGAA+TGG | 0.642124 | 3_4:+75355220 | Msa0522290:CDS |
| TCCCACTCAGTTGATAGAAG+GGG | 0.643504 | 3_4:+75357071 | Msa0522290:CDS |
| GTAAGAGACTGCTTGTGTGA+AGG | 0.648800 | 3_4:-75357366 | None:intergenic |
| TAAGCTGGATTAGATCGAAG+TGG | 0.651196 | 3_4:-75351475 | None:intergenic |
| GTTGACAGCATCCAGGATCG+GGG | 0.664069 | 3_4:+75353080 | Msa0522290:CDS |
| TACACTTGCTAGTAGAGATG+TGG | 0.667049 | 3_4:+75355462 | Msa0522290:CDS |
| GTTCACAAAGATGGCCCAAG+AGG | 0.667902 | 3_4:+75352164 | Msa0522290:CDS |
| GATTCTTGGGACATCCCGAG+GGG | 0.672975 | 3_4:+75353037 | Msa0522290:CDS |
| TGCAACTGTCACTGTCAGCG+AGG | 0.681592 | 3_4:-75357125 | None:intergenic |
| GGAGGAGATGGAACACAGCG+AGG | 0.687653 | 3_4:+75353280 | Msa0522290:CDS |
| ACGTTGAGCCTCCTCAACTG+CGG | 0.700198 | 3_4:-75355176 | None:intergenic |
| TGTGATTACTGACAGAATGT+GGG | 0.717274 | 3_4:+75356900 | Msa0522290:CDS |
| CCAGACCCACCTTGACACGT+CGG | 0.721162 | 3_4:+75351056 | Msa0522290:five_prime_UTR |
| GTCATAAGGGAAATTGTGTG+TGG | 0.728717 | 3_4:+75352385 | Msa0522290:CDS |
| AATGACATCCATAAGCGTGG+AGG | 0.732879 | 3_4:+75353011 | Msa0522290:CDS |
| ATACAGGAAGTTAGACAGCG+AGG | 0.746448 | 3_4:+75354941 | Msa0522290:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATTTAAATATTACAA+AGG | + | chr3_4:75354608-75354627 | Msa0522290:intron | 10.0% |
| !! | TTTATGAATTTATTACAAAA+AGG | + | chr3_4:75355536-75355555 | Msa0522290:CDS | 10.0% |
| !! | GTAAATAAATATAAAAAAAC+TGG | - | chr3_4:75356150-75356169 | None:intergenic | 10.0% |
| !! | ATCTTAGAAAAATAAAAAAT+TGG | - | chr3_4:75356806-75356825 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354203-75354222 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354203-75354222 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354203-75354222 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354203-75354222 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354203-75354222 | None:intergenic | 100.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354211-75354230 | None:intergenic | 100.0% |
| ! | CCGGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354212-75354231 | None:intergenic | 100.0% |
| ! | CCCCCCCCCCCCCCCCCCCC+CGG | + | chr3_4:75354203-75354222 | Msa0522290:intron | 100.0% |
| ! | CCCGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354213-75354232 | None:intergenic | 100.0% |
| ! | CCCCCCCCCCCCCCCCCCCC+GGG | + | chr3_4:75354203-75354222 | Msa0522290:intron | 100.0% |
| !!! | TACTATTTTTTCTTTGTTTT+TGG | - | chr3_4:75351219-75351238 | None:intergenic | 15.0% |
| !!! | TCATTTTTGTAAATTATTCT+TGG | + | chr3_4:75352594-75352613 | Msa0522290:intron | 15.0% |
| !!! | CATTTTTGTAAATTATTCTT+GGG | + | chr3_4:75352595-75352614 | Msa0522290:intron | 15.0% |
| !!! | ATTTTTGTAAATTATTCTTG+GGG | + | chr3_4:75352596-75352615 | Msa0522290:intron | 15.0% |
| !! | TAATAGAATATTCCTTTATT+TGG | + | chr3_4:75353345-75353364 | Msa0522290:intron | 15.0% |
| !! | TCCTAAAAATTAAAAAGAAA+CGG | - | chr3_4:75354426-75354445 | None:intergenic | 15.0% |
| !! | AATGAAATAATAAATGTTTC+GGG | - | chr3_4:75354523-75354542 | None:intergenic | 15.0% |
| !! | GAATGAAATAATAAATGTTT+CGG | - | chr3_4:75354524-75354543 | None:intergenic | 15.0% |
| !! | ATTTAAATATTACAAAGGAA+CGG | + | chr3_4:75354613-75354632 | Msa0522290:intron | 15.0% |
| !!! | TTATGCTATATAATTTGTTT+AGG | - | chr3_4:75355785-75355804 | None:intergenic | 15.0% |
| !! | TAAAAAAACTAATCCAAATA+GGG | - | chr3_4:75355909-75355928 | None:intergenic | 15.0% |
| !! | ATAAAAATTAAGATGTAGAA+TGG | + | chr3_4:75355946-75355965 | Msa0522290:intron | 15.0% |
| !! | AAGTTGAATGTTTATTAAAA+GGG | - | chr3_4:75356236-75356255 | None:intergenic | 15.0% |
| !! | TCAAGAAATAAAATTAGATA+AGG | + | chr3_4:75357148-75357167 | Msa0522290:exon | 15.0% |
| !!! | GAAACGTTTGATTATTTTTT+CGG | - | chr3_4:75351094-75351113 | None:intergenic | 20.0% |
| !! | AATGAAAGAAATAAGAAGAA+AGG | - | chr3_4:75351168-75351187 | None:intergenic | 20.0% |
| !! | CAAATGTAACTGAAAAAATT+GGG | - | chr3_4:75351402-75351421 | None:intergenic | 20.0% |
| !!! | TTTAAAGTAACAAACATGAA+TGG | - | chr3_4:75351856-75351875 | None:intergenic | 20.0% |
| !!! | CTGAATGTTTGTTATTATTA+CGG | + | chr3_4:75352040-75352059 | Msa0522290:intron | 20.0% |
| !! | ATAATAATGTGTACTAAAGT+TGG | - | chr3_4:75352641-75352660 | None:intergenic | 20.0% |
| !!! | TCCGTTTCTTTTTAATTTTT+AGG | + | chr3_4:75354422-75354441 | Msa0522290:intron | 20.0% |
| !! | ATGAAATAATAAATGTTTCG+GGG | - | chr3_4:75354522-75354541 | None:intergenic | 20.0% |
| !! | CAAAATAGAAAACATATGTA+CGG | - | chr3_4:75354842-75354861 | None:intergenic | 20.0% |
| !!! | AATATTTTAGTCATTACGTT+TGG | - | chr3_4:75355356-75355375 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCGTGTTGTAA+TGG | + | chr3_4:75355405-75355424 | Msa0522290:intron | 20.0% |
| !!! | TATATAATTTGTTTAGGAAG+AGG | - | chr3_4:75355779-75355798 | None:intergenic | 20.0% |
| !! | AAAAAAACTAATCCAAATAG+GGG | - | chr3_4:75355908-75355927 | None:intergenic | 20.0% |
| !! | CTAAAAAAACTAATCCAAAT+AGG | - | chr3_4:75355910-75355929 | None:intergenic | 20.0% |
| !!! | CAAGTTGAATGTTTATTAAA+AGG | - | chr3_4:75356237-75356256 | None:intergenic | 20.0% |
| !! | ACCTATATATTTAAGAACAA+TGG | - | chr3_4:75356297-75356316 | None:intergenic | 20.0% |
| !! | TGTTATTGATATATATCAAG+TGG | + | chr3_4:75356629-75356648 | Msa0522290:intron | 20.0% |
| !! | ATAAAAAATTGGATGCAAAT+AGG | - | chr3_4:75356795-75356814 | None:intergenic | 20.0% |
| !! | TTTATTTGATGAACATCTTT+GGG | - | chr3_4:75356967-75356986 | None:intergenic | 20.0% |
| !!! | AAATACAATTTTGGAATACA+AGG | - | chr3_4:75357174-75357193 | None:intergenic | 20.0% |
| !! | TTGTATTCCAAAATTGTATT+TGG | + | chr3_4:75357173-75357192 | Msa0522290:three_prime_UTR | 20.0% |
| !!! | AGGCTTATTTTTGTAAAATT+TGG | + | chr3_4:75357237-75357256 | Msa0522290:three_prime_UTR | 20.0% |
| !!! | GGCTTATTTTTGTAAAATTT+GGG | + | chr3_4:75357238-75357257 | Msa0522290:three_prime_UTR | 20.0% |
| !!! | GCTTATTTTTGTAAAATTTG+GGG | + | chr3_4:75357239-75357258 | Msa0522290:three_prime_UTR | 20.0% |
| !! | TTCATATAATGAAGTTTCAT+AGG | + | chr3_4:75357284-75357303 | Msa0522290:three_prime_UTR | 20.0% |
| !!! | ATTACAGACATTTTATGAAA+TGG | - | chr3_4:75357334-75357353 | None:intergenic | 20.0% |
| !!! | GATTCTTTAGAGTAAAGAAA+TGG | + | chr3_4:75351255-75351274 | Msa0522290:exon | 25.0% |
| ! | GCAAATGTAACTGAAAAAAT+TGG | - | chr3_4:75351403-75351422 | None:intergenic | 25.0% |
| !! | TTTGGAATAACTAACACATT+TGG | - | chr3_4:75351566-75351585 | None:intergenic | 25.0% |
| ! | AAAAGCAGAAAATCAACATT+TGG | - | chr3_4:75351584-75351603 | None:intergenic | 25.0% |
| ! | AATGAAGAAAATGAACAAAC+AGG | - | chr3_4:75351689-75351708 | None:intergenic | 25.0% |
| ! | TACCTATACAACAATTTACT+AGG | - | chr3_4:75352296-75352315 | None:intergenic | 25.0% |
| !!! | CTCTTTTAACTTATTCTCAT+TGG | + | chr3_4:75352466-75352485 | Msa0522290:intron | 25.0% |
| ! | ACACATTATTATATGTTCTC+TGG | + | chr3_4:75352649-75352668 | Msa0522290:intron | 25.0% |
| !!! | TTCAATTACTTTTGTCCATT+TGG | - | chr3_4:75352747-75352766 | None:intergenic | 25.0% |
| ! | TAAAATTAGATATAGCTCAG+TGG | - | chr3_4:75352929-75352948 | None:intergenic | 25.0% |
| !! | AGCTATATCTAATTTTACAC+AGG | + | chr3_4:75352932-75352951 | Msa0522290:intron | 25.0% |
| !! | GCTATATCTAATTTTACACA+GGG | + | chr3_4:75352933-75352952 | Msa0522290:intron | 25.0% |
| !! | TTGGAAACTTTTGTAGAATA+TGG | - | chr3_4:75353138-75353157 | None:intergenic | 25.0% |
| !! | ATATCAATGTTAACTTGAGT+AGG | + | chr3_4:75353200-75353219 | Msa0522290:intron | 25.0% |
| !! | GTTCTCCAAATTAATTTTGA+GGG | + | chr3_4:75353533-75353552 | Msa0522290:intron | 25.0% |
| !! | TTCTCCAAATTAATTTTGAG+GGG | + | chr3_4:75353534-75353553 | Msa0522290:intron | 25.0% |
| ! | CATTTAAATAAGTTACTGAC+AGG | + | chr3_4:75353837-75353856 | Msa0522290:intron | 25.0% |
| !! | TAATTTTGAGCTAAAGTTGT+TGG | + | chr3_4:75353948-75353967 | Msa0522290:intron | 25.0% |
| ! | TTGAAAAGAAGGAAAAACAA+GGG | - | chr3_4:75354060-75354079 | None:intergenic | 25.0% |
| ! | TTTGAAAAGAAGGAAAAACA+AGG | - | chr3_4:75354061-75354080 | None:intergenic | 25.0% |
| !!! | CCATTCAAATTTCACTTTTA+CGG | - | chr3_4:75354277-75354296 | None:intergenic | 25.0% |
| !! | TGTATATGATTTTCACTTGA+AGG | - | chr3_4:75354316-75354335 | None:intergenic | 25.0% |
| ! | GTAGATATATAACAAGGAAA+CGG | - | chr3_4:75354360-75354379 | None:intergenic | 25.0% |
| ! | ACTTCAGTAGATATATAACA+AGG | - | chr3_4:75354366-75354385 | None:intergenic | 25.0% |
| !! | TGAACATAATCGTGAATTTT+TGG | + | chr3_4:75354389-75354408 | Msa0522290:intron | 25.0% |
| !!! | ACAAAATTTGTTGATCATCT+TGG | - | chr3_4:75354462-75354481 | None:intergenic | 25.0% |
| ! | AAATATTGAAAAGGAACAGT+GGG | + | chr3_4:75354679-75354698 | Msa0522290:intron | 25.0% |
| !! | ATGTCATTATCTATGGTTTT+TGG | - | chr3_4:75354992-75355011 | None:intergenic | 25.0% |
| !!! | GATTAGTTTTTTTAGCAGAT+GGG | + | chr3_4:75355915-75355934 | Msa0522290:intron | 25.0% |
| !! | TATTTAGTATCTTCTGAAAG+TGG | - | chr3_4:75356050-75356069 | None:intergenic | 25.0% |
| ! | CACAAAAAATACTACATACA+TGG | + | chr3_4:75356090-75356109 | Msa0522290:intron | 25.0% |
| ! | GCCATTGTTCTTAAATATAT+AGG | + | chr3_4:75356293-75356312 | Msa0522290:CDS | 25.0% |
| ! | ATACAACGAATAGATCAAAA+TGG | - | chr3_4:75356344-75356363 | None:intergenic | 25.0% |
| ! | AAAACGAACTTGATTTATAC+AGG | - | chr3_4:75356729-75356748 | None:intergenic | 25.0% |
| !! | CTTTATTTGATGAACATCTT+TGG | - | chr3_4:75356968-75356987 | None:intergenic | 25.0% |
| ! | TATTCCAAAATTGTATTTGG+TGG | + | chr3_4:75357176-75357195 | Msa0522290:three_prime_UTR | 25.0% |
| GAGAAAAATACAGGAAGATT+TGG | - | chr3_4:75351370-75351389 | None:intergenic | 30.0% | |
| AGAAAGAGAGAGAAAAATAC+AGG | - | chr3_4:75351379-75351398 | None:intergenic | 30.0% | |
| !!! | TTTCTGCTTTTTGTGATTTC+AGG | + | chr3_4:75351593-75351612 | Msa0522290:intron | 30.0% |
| !! | ATATAGAACCTTTTGAGGAA+CGG | - | chr3_4:75351644-75351663 | None:intergenic | 30.0% |
| ! | AACAGATATAGAACCTTTTG+AGG | - | chr3_4:75351649-75351668 | None:intergenic | 30.0% |
| ! | TAGTTGATGTTTGATAGATC+AGG | - | chr3_4:75351754-75351773 | None:intergenic | 30.0% |
| GTAAGAAGACTTTATACTGA+CGG | + | chr3_4:75351945-75351964 | Msa0522290:intron | 30.0% | |
| CATCAGTTAGTAATCAATCA+AGG | - | chr3_4:75351987-75352006 | None:intergenic | 30.0% | |
| TTTACTGAAATCAGAGAAAG+AGG | + | chr3_4:75352070-75352089 | Msa0522290:intron | 30.0% | |
| ! | TTGTTTGTACACGTGTTATT+AGG | + | chr3_4:75352234-75352253 | Msa0522290:intron | 30.0% |
| GACCTAGTAAATTGTTGTAT+AGG | + | chr3_4:75352291-75352310 | Msa0522290:intron | 30.0% | |
| ! | CATTACATTATTTGTTGCTC+TGG | + | chr3_4:75352490-75352509 | Msa0522290:intron | 30.0% |
| ATTATATGTTCTCTGGTTAC+TGG | + | chr3_4:75352656-75352675 | Msa0522290:intron | 30.0% | |
| TTCACAAATGGAAAAGGATA+TGG | - | chr3_4:75352716-75352735 | None:intergenic | 30.0% | |
| ! | TATCCTTTTCCATTTGTGAA+AGG | + | chr3_4:75352716-75352735 | Msa0522290:intron | 30.0% |
| ! | GAGTGAACTAAACAAACTTT+TGG | + | chr3_4:75352816-75352835 | Msa0522290:intron | 30.0% |
| !!! | CACTTTACTTTTTGTCACAT+CGG | + | chr3_4:75352863-75352882 | Msa0522290:intron | 30.0% |
| AGTTGCATTTCTTGATTCAT+TGG | + | chr3_4:75352898-75352917 | Msa0522290:intron | 30.0% | |
| ! | ATATCTAATTTTACACAGGG+TGG | + | chr3_4:75352936-75352955 | Msa0522290:intron | 30.0% |
| ! | CACTTTAGGAGTTAAAGTAA+TGG | - | chr3_4:75352988-75353007 | None:intergenic | 30.0% |
| CATTACTTTAACTCCTAAAG+TGG | + | chr3_4:75352986-75353005 | Msa0522290:CDS | 30.0% | |
| TTTCCAATGATACTGAATGA+TGG | + | chr3_4:75353151-75353170 | Msa0522290:intron | 30.0% | |
| ATTCCATCATTCAGTATCAT+TGG | - | chr3_4:75353157-75353176 | None:intergenic | 30.0% | |
| !! | ATTTTCACTGTTTGGGTTAT+TGG | + | chr3_4:75353240-75353259 | Msa0522290:intron | 30.0% |
| ! | TTGGTTCAGGTTTATATCAT+TGG | + | chr3_4:75353259-75353278 | Msa0522290:intron | 30.0% |
| !!! | TATGCTCTTATTTTCCTTAC+TGG | - | chr3_4:75353374-75353393 | None:intergenic | 30.0% |
| TCTTCACAATACAAGTGATT+AGG | + | chr3_4:75353511-75353530 | Msa0522290:intron | 30.0% | |
| ! | GGTTCTCCAAATTAATTTTG+AGG | + | chr3_4:75353532-75353551 | Msa0522290:intron | 30.0% |
| GTTACCCCTCAAAATTAATT+TGG | - | chr3_4:75353541-75353560 | None:intergenic | 30.0% | |
| TTAGCTGAGATACAGAAAAA+GGG | - | chr3_4:75353729-75353748 | None:intergenic | 30.0% | |
| ! | CTTTAGCTCAAATTTGGAAA+AGG | - | chr3_4:75353882-75353901 | None:intergenic | 30.0% |
| ! | CAACAACTTTAGCTCAAATT+TGG | - | chr3_4:75353888-75353907 | None:intergenic | 30.0% |
| CAAATTTGAGCTAAAGTTGT+TGG | + | chr3_4:75353886-75353905 | Msa0522290:intron | 30.0% | |
| ATTTGCACTGTTTGAAAAGA+AGG | - | chr3_4:75354071-75354090 | None:intergenic | 30.0% | |
| TTTGGAAATAAGAAAGAACC+CGG | - | chr3_4:75354231-75354250 | None:intergenic | 30.0% | |
| CCGTAAAAGTGAAATTTGAA+TGG | + | chr3_4:75354274-75354293 | Msa0522290:intron | 30.0% | |
| ATATATAACAAGGAAACGGA+AGG | - | chr3_4:75354356-75354375 | None:intergenic | 30.0% | |
| AATTAAAAAGAAACGGAGAG+TGG | - | chr3_4:75354419-75354438 | None:intergenic | 30.0% | |
| ! | TTTCGGGGTATTATAAGAAA+GGG | - | chr3_4:75354507-75354526 | None:intergenic | 30.0% |
| TTCTCTTTGCAATAAATCAC+TGG | + | chr3_4:75354551-75354570 | Msa0522290:intron | 30.0% | |
| TCTCTTTGCAATAAATCACT+GGG | + | chr3_4:75354552-75354571 | Msa0522290:intron | 30.0% | |
| TAAATATTACAAAGGAACGG+AGG | + | chr3_4:75354616-75354635 | Msa0522290:intron | 30.0% | |
| !!! | AACCGAGGAACATTATTTTT+TGG | + | chr3_4:75354649-75354668 | Msa0522290:intron | 30.0% |
| TGCCAAAAAATAATGTTCCT+CGG | - | chr3_4:75354654-75354673 | None:intergenic | 30.0% | |
| GGCAAATGCAAATATTGAAA+AGG | + | chr3_4:75354670-75354689 | Msa0522290:intron | 30.0% | |
| CAAATATTGAAAAGGAACAG+TGG | + | chr3_4:75354678-75354697 | Msa0522290:intron | 30.0% | |
| ACTACATTAGTGCAATATGT+TGG | + | chr3_4:75354710-75354729 | Msa0522290:intron | 30.0% | |
| !! | CAATATGTTGGTTTCCAAAA+AGG | + | chr3_4:75354722-75354741 | Msa0522290:intron | 30.0% |
| ! | AACTATACAAACCACCTTTT+TGG | - | chr3_4:75354739-75354758 | None:intergenic | 30.0% |
| ! | AAAAGGTGGTTTGTATAGTT+CGG | + | chr3_4:75354739-75354758 | Msa0522290:intron | 30.0% |
| ! | TTCTTGGCATCTTTTTAACA+TGG | + | chr3_4:75354886-75354905 | Msa0522290:intron | 30.0% |
| ! | TCTTGGCATCTTTTTAACAT+GGG | + | chr3_4:75354887-75354906 | Msa0522290:intron | 30.0% |
| ! | TAAGCATTCTGAGCATATTT+TGG | + | chr3_4:75354913-75354932 | Msa0522290:intron | 30.0% |
| !!! | GCATATTTTGGTTATCATAC+AGG | + | chr3_4:75354925-75354944 | Msa0522290:intron | 30.0% |
| ! | TAACCTTGTCATTTGAGTTA+CGG | + | chr3_4:75355058-75355077 | Msa0522290:intron | 30.0% |
| ! | CGTTTTTCTTCTGTTTGATT+AGG | + | chr3_4:75355126-75355145 | Msa0522290:intron | 30.0% |
| !! | ATTGGTGTTGTAAAGCTAAT+GGG | + | chr3_4:75355244-75355263 | Msa0522290:CDS | 30.0% |
| ! | TTTTAGTCATTACGTTTGGA+TGG | - | chr3_4:75355352-75355371 | None:intergenic | 30.0% |
| !! | TACTTCAAGATGTTGGTTTA+TGG | + | chr3_4:75355668-75355687 | Msa0522290:CDS | 30.0% |
| ATGGATATCTCATAAGATCA+AGG | + | chr3_4:75355687-75355706 | Msa0522290:CDS | 30.0% | |
| TTAACTAGTTAACCTGTAGT+TGG | - | chr3_4:75355859-75355878 | None:intergenic | 30.0% | |
| !!! | GGATTAGTTTTTTTAGCAGA+TGG | + | chr3_4:75355914-75355933 | Msa0522290:intron | 30.0% |
| !!! | AGTATTTTTTGTGCATTGAG+TGG | - | chr3_4:75356083-75356102 | None:intergenic | 30.0% |
| TGCAACTATGATAATCTACA+GGG | - | chr3_4:75356119-75356138 | None:intergenic | 30.0% | |
| ATGCAACTATGATAATCTAC+AGG | - | chr3_4:75356120-75356139 | None:intergenic | 30.0% | |
| AATTGACTGTTCTTGATAGA+TGG | - | chr3_4:75356198-75356217 | None:intergenic | 30.0% | |
| !! | AACATTCAACTTGCTGAAAT+AGG | + | chr3_4:75356244-75356263 | Msa0522290:intron | 30.0% |
| ! | GAAATAGGATCATTTTGCAA+AGG | + | chr3_4:75356259-75356278 | Msa0522290:intron | 30.0% |
| ! | TTTTGCAAAGGAGAATAAGA+TGG | + | chr3_4:75356271-75356290 | Msa0522290:CDS | 30.0% |
| TATGGCTAGATTTCTTAACT+GGG | + | chr3_4:75356374-75356393 | Msa0522290:intron | 30.0% | |
| ATCTAGTAACTTACGTTGAA+TGG | - | chr3_4:75356557-75356576 | None:intergenic | 30.0% | |
| TGCACAATAACAAATGCTTA+AGG | + | chr3_4:75356767-75356786 | Msa0522290:intron | 30.0% | |
| ! | AACTCCACCAAATACAATTT+TGG | - | chr3_4:75357183-75357202 | None:intergenic | 30.0% |
| CTAAAACTCTTGTAGAGATA+AGG | - | chr3_4:75357491-75357510 | None:intergenic | 30.0% | |
| TAAGAAGAAAGGAAAGAGAG+TGG | - | chr3_4:75351157-75351176 | None:intergenic | 35.0% | |
| ACATGAATGGTTGTGATTTG+CGG | - | chr3_4:75351843-75351862 | None:intergenic | 35.0% | |
| ACTTTATTGTCCCTTTCCAT+AGG | + | chr3_4:75352136-75352155 | Msa0522290:intron | 35.0% | |
| TGAACAACAACCTATGGAAA+GGG | - | chr3_4:75352149-75352168 | None:intergenic | 35.0% | |
| TCTTTGTGAACAACAACCTA+TGG | - | chr3_4:75352155-75352174 | None:intergenic | 35.0% | |
| ! | TAGGTTGTTGTTCACAAAGA+TGG | + | chr3_4:75352155-75352174 | Msa0522290:intron | 35.0% |
| ATTGCTTGTATTGTCACATG+TGG | + | chr3_4:75352337-75352356 | Msa0522290:CDS | 35.0% | |
| TGTGGTCTTTCTTACATGTA+TGG | + | chr3_4:75352403-75352422 | Msa0522290:CDS | 35.0% | |
| ! | AGTACATCTTTGTTTGTCTC+TGG | + | chr3_4:75352561-75352580 | Msa0522290:intron | 35.0% |
| ATGCCTTTCACAAATGGAAA+AGG | - | chr3_4:75352722-75352741 | None:intergenic | 35.0% | |
| CGATGTGACAAAAAGTAAAG+TGG | - | chr3_4:75352865-75352884 | None:intergenic | 35.0% | |
| AGTAGGTTATTGTCATGACA+TGG | + | chr3_4:75353217-75353236 | Msa0522290:intron | 35.0% | |
| ! | TGACATGGATTTTCACTGTT+TGG | + | chr3_4:75353232-75353251 | Msa0522290:intron | 35.0% |
| ! | GACATGGATTTTCACTGTTT+GGG | + | chr3_4:75353233-75353252 | Msa0522290:intron | 35.0% |
| ! | GTTCAGGTTTATATCATTGG+AGG | + | chr3_4:75353262-75353281 | Msa0522290:intron | 35.0% |
| GTTTATATCATTGGAGGAGA+TGG | + | chr3_4:75353268-75353287 | Msa0522290:CDS | 35.0% | |
| CCTTACTGGAATCCAAATAA+AGG | - | chr3_4:75353360-75353379 | None:intergenic | 35.0% | |
| ! | CCTTTATTTGGATTCCAGTA+AGG | + | chr3_4:75353357-75353376 | Msa0522290:intron | 35.0% |
| !! | TTAATTTTGAGGGGTAACCT+TGG | + | chr3_4:75353543-75353562 | Msa0522290:intron | 35.0% |
| CTTAGCTGAGATACAGAAAA+AGG | - | chr3_4:75353730-75353749 | None:intergenic | 35.0% | |
| GTTGGTTAACTAATGTCTTC+TGG | + | chr3_4:75353904-75353923 | Msa0522290:intron | 35.0% | |
| !! | AACTAATGTCTTCTGGAATG+TGG | + | chr3_4:75353911-75353930 | Msa0522290:intron | 35.0% |
| GTTGGTTAACTAATGTCTTC+TGG | + | chr3_4:75353904-75353923 | Msa0522290:intron | 35.0% | |
| !! | AACTAATGTCTTCTGGAATG+TGG | + | chr3_4:75353911-75353930 | Msa0522290:intron | 35.0% |
| AAGAAGGAAAAACAAGGGAA+GGG | - | chr3_4:75354055-75354074 | None:intergenic | 35.0% | |
| AAAGAAGGAAAAACAAGGGA+AGG | - | chr3_4:75354056-75354075 | None:intergenic | 35.0% | |
| ! | TGCAAATGATGATAGTGTAG+TGG | + | chr3_4:75354084-75354103 | Msa0522290:intron | 35.0% |
| GTTAGTTAACCAATGTCTTC+TGG | + | chr3_4:75354112-75354131 | Msa0522290:intron | 35.0% | |
| AAACAGTTTCCAGAAGACAT+TGG | - | chr3_4:75354124-75354143 | None:intergenic | 35.0% | |
| TTGGAAATAAGAAAGAACCC+GGG | - | chr3_4:75354230-75354249 | None:intergenic | 35.0% | |
| ! | ATGATTTTCACTTGAAGGCA+TGG | - | chr3_4:75354311-75354330 | None:intergenic | 35.0% |
| ! | GTTTCGGGGTATTATAAGAA+AGG | - | chr3_4:75354508-75354527 | None:intergenic | 35.0% |
| CTCTTTGCAATAAATCACTG+GGG | + | chr3_4:75354553-75354572 | Msa0522290:intron | 35.0% | |
| TCTTTGCAATAAATCACTGG+GGG | + | chr3_4:75354554-75354573 | Msa0522290:intron | 35.0% | |
| GGAGGAATTAAAAATAACCG+AGG | + | chr3_4:75354634-75354653 | Msa0522290:intron | 35.0% | |
| !! | TATGTTGGTTTCCAAAAAGG+TGG | + | chr3_4:75354725-75354744 | Msa0522290:intron | 35.0% |
| ! | TAGGTCAAGCTTTATGTTCA+AGG | + | chr3_4:75354782-75354801 | Msa0522290:intron | 35.0% |
| TTTATGTTCAAGGAACAGCT+GGG | + | chr3_4:75354792-75354811 | Msa0522290:intron | 35.0% | |
| !! | GATTGACTTGTTATCGTTCT+TGG | + | chr3_4:75354870-75354889 | Msa0522290:intron | 35.0% |
| AACCATAGATAATGACATCC+CGG | + | chr3_4:75354994-75355013 | Msa0522290:CDS | 35.0% | |
| AAATGACAAGGTTAGAGTTC+TGG | - | chr3_4:75355052-75355071 | None:intergenic | 35.0% | |
| TAACCGTAACTCAAATGACA+AGG | - | chr3_4:75355064-75355083 | None:intergenic | 35.0% | |
| TGTTTGATTAGGTTATCGAC+AGG | + | chr3_4:75355137-75355156 | Msa0522290:intron | 35.0% | |
| TTCAACATGTGCTGCATTAA+TGG | - | chr3_4:75355203-75355222 | None:intergenic | 35.0% | |
| !! | CATTGGTGTTGTAAAGCTAA+TGG | + | chr3_4:75355243-75355262 | Msa0522290:CDS | 35.0% |
| AGTAGGGTTCAATTAAACTC+AGG | - | chr3_4:75355325-75355344 | None:intergenic | 35.0% | |
| !! | GTAATGGATACTATAACTGC+AGG | + | chr3_4:75355421-75355440 | Msa0522290:intron | 35.0% |
| ACAAAAAGGCTGAAAGAAAG+TGG | + | chr3_4:75355550-75355569 | Msa0522290:CDS | 35.0% | |
| TATGGTCATAGTTATAGCTG+AGG | + | chr3_4:75355576-75355595 | Msa0522290:CDS | 35.0% | |
| ATGGTCATAGTTATAGCTGA+GGG | + | chr3_4:75355577-75355596 | Msa0522290:CDS | 35.0% | |
| AACAAGCTACTTCAAGATGT+TGG | + | chr3_4:75355661-75355680 | Msa0522290:CDS | 35.0% | |
| GTTGTTTGCATATATCTACG+AGG | + | chr3_4:75355806-75355825 | Msa0522290:intron | 35.0% | |
| TACGAGGAATTAAGAACTCA+AGG | + | chr3_4:75355822-75355841 | Msa0522290:intron | 35.0% | |
| GATTCATTGATACCCCTATT+TGG | + | chr3_4:75355893-75355912 | Msa0522290:intron | 35.0% | |
| CGAATAGATCAAAATGGAAG+AGG | - | chr3_4:75356338-75356357 | None:intergenic | 35.0% | |
| CGTTGTATCTTAGACTACTA+TGG | + | chr3_4:75356356-75356375 | Msa0522290:intron | 35.0% | |
| CTATGGCTAGATTTCTTAAC+TGG | + | chr3_4:75356373-75356392 | Msa0522290:intron | 35.0% | |
| TCAGATTATAAAACTGTGCG+AGG | - | chr3_4:75356582-75356601 | None:intergenic | 35.0% | |
| ATATGCTACTGTTGTTGAGA+TGG | + | chr3_4:75356691-75356710 | Msa0522290:intron | 35.0% | |
| TTGTGATTACTGACAGAATG+TGG | + | chr3_4:75356899-75356918 | Msa0522290:CDS | 35.0% | |
| TGTGATTACTGACAGAATGT+GGG | + | chr3_4:75356900-75356919 | Msa0522290:CDS | 35.0% | |
| ! | TCTTTGGGTTTCAAAAAGCT+TGG | - | chr3_4:75356952-75356971 | None:intergenic | 35.0% |
| ! | GAAGTTTTGCTGGAATGATT+AGG | + | chr3_4:75357217-75357236 | Msa0522290:three_prime_UTR | 35.0% |
| GGTGTGTCTAATTAAAGTAC+TGG | + | chr3_4:75357260-75357279 | Msa0522290:three_prime_UTR | 35.0% | |
| CTTACTCAGCTGATTAAGTT+TGG | + | chr3_4:75357384-75357403 | Msa0522290:three_prime_UTR | 35.0% | |
| TCACAGATGAAAATCGTCCA+TGG | + | chr3_4:75351295-75351314 | Msa0522290:CDS | 40.0% | |
| ! | AGGAAGATTTGGAACGTAGT+CGG | - | chr3_4:75351359-75351378 | None:intergenic | 40.0% |
| ! | GGATTAGATCGAAGTGGATT+AGG | - | chr3_4:75351472-75351491 | None:intergenic | 40.0% |
| ! | TAAGCTGGATTAGATCGAAG+TGG | - | chr3_4:75351478-75351497 | None:intergenic | 40.0% |
| TCGATCTAATCCAGCTTACT+CGG | + | chr3_4:75351480-75351499 | Msa0522290:CDS | 40.0% | |
| TACTTAACAACCGAGTAAGC+TGG | - | chr3_4:75351493-75351512 | None:intergenic | 40.0% | |
| ATGCATAGTAAACACGATCG+AGG | - | chr3_4:75351719-75351738 | None:intergenic | 40.0% | |
| GTGAACAACAACCTATGGAA+AGG | - | chr3_4:75352150-75352169 | None:intergenic | 40.0% | |
| GTCGAAAATGAACACCTCTT+GGG | - | chr3_4:75352181-75352200 | None:intergenic | 40.0% | |
| TTTCCCTTATGACAGTGTTG+AGG | - | chr3_4:75352378-75352397 | None:intergenic | 40.0% | |
| GTCATAAGGGAAATTGTGTG+TGG | + | chr3_4:75352385-75352404 | Msa0522290:CDS | 40.0% | |
| TTTGCACAAGTTTGGAAACC+TGG | + | chr3_4:75352689-75352708 | Msa0522290:intron | 40.0% | |
| AATGGAAAAGGATATGGTCC+AGG | - | chr3_4:75352710-75352729 | None:intergenic | 40.0% | |
| TTGGTCATGCCTTTCACAAA+TGG | - | chr3_4:75352728-75352747 | None:intergenic | 40.0% | |
| ! | TTGTGAAAGGCATGACCAAA+TGG | + | chr3_4:75352729-75352748 | Msa0522290:intron | 40.0% |
| TTTACACAGGGTGGTTATAG+AGG | + | chr3_4:75352945-75352964 | Msa0522290:intron | 40.0% | |
| TGGATGTCATTGACCACTTT+AGG | - | chr3_4:75353002-75353021 | None:intergenic | 40.0% | |
| !! | ACTGTTTGGGTTATTGGTTC+AGG | + | chr3_4:75353246-75353265 | Msa0522290:intron | 40.0% |
| CTGCTGTGATTTATGAGGTA+TGG | + | chr3_4:75353305-75353324 | Msa0522290:intron | 40.0% | |
| TATGAGGTATGGTGATTCAG+AGG | + | chr3_4:75353316-75353335 | Msa0522290:intron | 40.0% | |
| !!! | TTACCCTGTTTTTACACGAG+AGG | - | chr3_4:75353630-75353649 | None:intergenic | 40.0% |
| TCTCGTGTAAAAACAGGGTA+AGG | + | chr3_4:75353629-75353648 | Msa0522290:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr3_4:75353655-75353674 | Msa0522290:intron | 40.0% | |
| TGGAAATAAGAAAGAACCCG+GGG | - | chr3_4:75354229-75354248 | None:intergenic | 40.0% | |
| !! | CGGAAGGCATTTGAAGTTTA+AGG | - | chr3_4:75354340-75354359 | None:intergenic | 40.0% |
| CATAAAGCTTGACCTATCAG+AGG | - | chr3_4:75354778-75354797 | None:intergenic | 40.0% | |
| CTTTATGTTCAAGGAACAGC+TGG | + | chr3_4:75354791-75354810 | Msa0522290:intron | 40.0% | |
| TACCGGGATGTCATTATCTA+TGG | - | chr3_4:75354999-75355018 | None:intergenic | 40.0% | |
| ACATAGAGATTGAGCATACC+GGG | - | chr3_4:75355015-75355034 | None:intergenic | 40.0% | |
| GACATAGAGATTGAGCATAC+CGG | - | chr3_4:75355016-75355035 | None:intergenic | 40.0% | |
| TACGGTTACATCTGATGAGT+CGG | + | chr3_4:75355076-75355095 | Msa0522290:intron | 40.0% | |
| AACTGCGGTATCAAAACCAA+AGG | - | chr3_4:75355164-75355183 | None:intergenic | 40.0% | |
| !! | GAAGCTGAAAGTGTTGAGAA+TGG | + | chr3_4:75355220-75355239 | Msa0522290:CDS | 40.0% |
| !! | GAAAGTGTTGAGAATGGCAT+TGG | + | chr3_4:75355226-75355245 | Msa0522290:CDS | 40.0% |
| ! | AAGCTAATGGGTCGTTATAG+TGG | + | chr3_4:75355256-75355275 | Msa0522290:CDS | 40.0% |
| TAGTCATTACGTTTGGATGG+AGG | - | chr3_4:75355349-75355368 | None:intergenic | 40.0% | |
| ! | TACACTTGCTAGTAGAGATG+TGG | + | chr3_4:75355462-75355481 | Msa0522290:CDS | 40.0% |
| GCTGAAAGAAAGTGGACATA+TGG | + | chr3_4:75355558-75355577 | Msa0522290:CDS | 40.0% | |
| ! | TACAGAAAGCATGCAAGACA+TGG | + | chr3_4:75355618-75355637 | Msa0522290:CDS | 40.0% |
| GAGGAATTAAGAACTCAAGG+AGG | + | chr3_4:75355825-75355844 | Msa0522290:intron | 40.0% | |
| CAGATCCAACTTACATGATC+CGG | + | chr3_4:75356405-75356424 | Msa0522290:intron | 40.0% | |
| AGATCCAACTTACATGATCC+GGG | + | chr3_4:75356406-75356425 | Msa0522290:intron | 40.0% | |
| CACAACGTTGTTCATCTTCT+CGG | - | chr3_4:75356884-75356903 | None:intergenic | 40.0% | |
| !! | ATTCCCACTCAGTTGATAGA+AGG | + | chr3_4:75357069-75357088 | Msa0522290:CDS | 40.0% |
| !! | TTCCCACTCAGTTGATAGAA+GGG | + | chr3_4:75357070-75357089 | Msa0522290:CDS | 40.0% |
| ! | GTGACATGATGAAGTTTTGC+TGG | + | chr3_4:75357207-75357226 | Msa0522290:three_prime_UTR | 40.0% |
| AGCTGATTAAGTTTGGCACA+AGG | + | chr3_4:75357391-75357410 | Msa0522290:three_prime_UTR | 40.0% | |
| ! | GAGATTGAGTTGTGTGTTCA+AGG | + | chr3_4:75357461-75357480 | Msa0522290:three_prime_UTR | 40.0% |
| CAGGCAGTACTTTGTGCATA+TGG | + | chr3_4:75351612-75351631 | Msa0522290:intron | 45.0% | |
| CGTCGAAAATGAACACCTCT+TGG | - | chr3_4:75352182-75352201 | None:intergenic | 45.0% | |
| ! | AGCGAAATAACCTTTTGCCG+AGG | - | chr3_4:75352212-75352231 | None:intergenic | 45.0% |
| GCTTGTATTGTCACATGTGG+TGG | + | chr3_4:75352340-75352359 | Msa0522290:CDS | 45.0% | |
| ! | TTATGACAGTGTTGAGGCCA+GGG | - | chr3_4:75352372-75352391 | None:intergenic | 45.0% |
| TGGCCTCAACACTGTCATAA+GGG | + | chr3_4:75352372-75352391 | Msa0522290:CDS | 45.0% | |
| !! | TATGGTGTCGACAAAGTCCT+TGG | + | chr3_4:75352421-75352440 | Msa0522290:CDS | 45.0% |
| GTCAATGACATCCATAAGCG+TGG | + | chr3_4:75353008-75353027 | Msa0522290:CDS | 45.0% | |
| AATGACATCCATAAGCGTGG+AGG | + | chr3_4:75353011-75353030 | Msa0522290:CDS | 45.0% | |
| CAAGATAGTTGACAGCATCC+AGG | + | chr3_4:75353073-75353092 | Msa0522290:CDS | 45.0% | |
| TAGTTGACAGCATCCAGGAT+CGG | + | chr3_4:75353078-75353097 | Msa0522290:CDS | 45.0% | |
| AGGAGCTGCTGTGATTTATG+AGG | + | chr3_4:75353300-75353319 | Msa0522290:CDS | 45.0% | |
| GTTGTTGTCATGTGACCGTA+AGG | + | chr3_4:75353579-75353598 | Msa0522290:intron | 45.0% | |
| GATTTGAACCCGTGACCTTA+CGG | - | chr3_4:75353597-75353616 | None:intergenic | 45.0% | |
| ACAGCCTCTCGTGTAAAAAC+AGG | + | chr3_4:75353623-75353642 | Msa0522290:intron | 45.0% | |
| CAGCCTCTCGTGTAAAAACA+GGG | + | chr3_4:75353624-75353643 | Msa0522290:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr3_4:75353651-75353670 | Msa0522290:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr3_4:75353654-75353673 | Msa0522290:intron | 45.0% | |
| GATACAGAAAAAGGGCAACC+CGG | - | chr3_4:75353721-75353740 | None:intergenic | 45.0% | |
| TCAGTGCTATCTCTGTGTGA+GGG | - | chr3_4:75353794-75353813 | None:intergenic | 45.0% | |
| ATCAGTGCTATCTCTGTGTG+AGG | - | chr3_4:75353795-75353814 | None:intergenic | 45.0% | |
| AGGAAAAACAAGGGAAGGGT+GGG | - | chr3_4:75354051-75354070 | None:intergenic | 45.0% | |
| AAGGAAAAACAAGGGAAGGG+TGG | - | chr3_4:75354052-75354071 | None:intergenic | 45.0% | |
| AAATAAGAAAGAACCCGGGG+GGG | - | chr3_4:75354226-75354245 | None:intergenic | 45.0% | |
| GAAATAAGAAAGAACCCGGG+GGG | - | chr3_4:75354227-75354246 | None:intergenic | 45.0% | |
| GGAAATAAGAAAGAACCCGG+GGG | - | chr3_4:75354228-75354247 | None:intergenic | 45.0% | |
| CTATCATCGCTTGCACTGTT+TGG | - | chr3_4:75354249-75354268 | None:intergenic | 45.0% | |
| ACTACCTCAGTACCTCTGAT+AGG | + | chr3_4:75354763-75354782 | Msa0522290:intron | 45.0% | |
| !! | TTGACCTATCAGAGGTACTG+AGG | - | chr3_4:75354770-75354789 | None:intergenic | 45.0% |
| ATACAGGAAGTTAGACAGCG+AGG | + | chr3_4:75354941-75354960 | Msa0522290:intron | 45.0% | |
| GGTCTGAAAGTAGCAATTGC+TGG | + | chr3_4:75354962-75354981 | Msa0522290:CDS | 45.0% | |
| TAGGTTATCGACAGGTCCTT+TGG | + | chr3_4:75355145-75355164 | Msa0522290:intron | 45.0% | |
| !!! | TGGTTTTGATACCGCAGTTG+AGG | + | chr3_4:75355165-75355184 | Msa0522290:CDS | 45.0% |
| ! | TTTTGATACCGCAGTTGAGG+AGG | + | chr3_4:75355168-75355187 | Msa0522290:CDS | 45.0% |
| ACGTTTGGATGGAGGAAGTA+GGG | - | chr3_4:75355341-75355360 | None:intergenic | 45.0% | |
| TACGTTTGGATGGAGGAAGT+AGG | - | chr3_4:75355342-75355361 | None:intergenic | 45.0% | |
| AGTCACCCTTCTACCTTGAA+GGG | + | chr3_4:75355503-75355522 | Msa0522290:CDS | 45.0% | |
| ATAGTTATAGCTGAGGGAGC+AGG | + | chr3_4:75355583-75355602 | Msa0522290:CDS | 45.0% | |
| !! | TGTTTCCAGAAGCATCCTTC+TGG | - | chr3_4:75355645-75355664 | None:intergenic | 45.0% |
| ! | CGGATCATGTAAGTTGGATC+TGG | - | chr3_4:75356407-75356426 | None:intergenic | 45.0% |
| ATTGCCCGGATCATGTAAGT+TGG | - | chr3_4:75356413-75356432 | None:intergenic | 45.0% | |
| ATGCATTGCTTGGAATTGCC+CGG | - | chr3_4:75356427-75356446 | None:intergenic | 45.0% | |
| ACACTGTCTGATGCATTGCT+TGG | - | chr3_4:75356437-75356456 | None:intergenic | 45.0% | |
| TTCACTGCTGGACTTGTGAA+TGG | + | chr3_4:75356515-75356534 | Msa0522290:CDS | 45.0% | |
| CATCTTCTCGGTGATTCTCT+GGG | - | chr3_4:75356872-75356891 | None:intergenic | 45.0% | |
| TCATCTTCTCGGTGATTCTC+TGG | - | chr3_4:75356873-75356892 | None:intergenic | 45.0% | |
| TGGGTTTCAAAAAGCTTGGC+TGG | - | chr3_4:75356948-75356967 | None:intergenic | 45.0% | |
| TCCCTGACTCAGTTGTTAGA+AGG | + | chr3_4:75357000-75357019 | Msa0522290:CDS | 45.0% | |
| CCCTTCTAACAACTGAGTCA+GGG | - | chr3_4:75357004-75357023 | None:intergenic | 45.0% | |
| CCCTGACTCAGTTGTTAGAA+GGG | + | chr3_4:75357001-75357020 | Msa0522290:CDS | 45.0% | |
| TCCCTTCTAACAACTGAGTC+AGG | - | chr3_4:75357005-75357024 | None:intergenic | 45.0% | |
| GAAGGGAGCAATTGCAATGT+TGG | + | chr3_4:75357018-75357037 | Msa0522290:CDS | 45.0% | |
| !! | TCCCACTCAGTTGATAGAAG+GGG | + | chr3_4:75357071-75357090 | Msa0522290:CDS | 45.0% |
| TCCCCTTCTATCAACTGAGT+GGG | - | chr3_4:75357075-75357094 | None:intergenic | 45.0% | |
| GTAAGAGACTGCTTGTGTGA+AGG | - | chr3_4:75357369-75357388 | None:intergenic | 45.0% | |
| GGATGACACCGTTCCTCAAA+AGG | + | chr3_4:75351633-75351652 | Msa0522290:CDS | 50.0% | |
| GTTCACAAAGATGGCCCAAG+AGG | + | chr3_4:75352164-75352183 | Msa0522290:CDS | 50.0% | |
| ! | GGTGTTCATTTTCGACGTGC+AGG | + | chr3_4:75352185-75352204 | Msa0522290:CDS | 50.0% |
| ! | ATTTTCGACGTGCAGGACCT+CGG | + | chr3_4:75352192-75352211 | Msa0522290:CDS | 50.0% |
| ! | CTTATGACAGTGTTGAGGCC+AGG | - | chr3_4:75352373-75352392 | None:intergenic | 50.0% |
| CTGGCCTCAACACTGTCATA+AGG | + | chr3_4:75352371-75352390 | Msa0522290:CDS | 50.0% | |
| GTCCTTGGCATAGATGTGAG+TGG | + | chr3_4:75352436-75352455 | Msa0522290:intron | 50.0% | |
| AGCCACTCACATCTATGCCA+AGG | - | chr3_4:75352441-75352460 | None:intergenic | 50.0% | |
| TGCACAGTCTGATGTGTGCT+AGG | + | chr3_4:75352515-75352534 | Msa0522290:intron | 50.0% | |
| CAGTCTGATGTGTGCTAGGA+AGG | + | chr3_4:75352519-75352538 | Msa0522290:intron | 50.0% | |
| GCGTGCTCTTTGCACAAGTT+TGG | + | chr3_4:75352681-75352700 | Msa0522290:intron | 50.0% | |
| GAATCGTTCCTCCACGCTTA+TGG | - | chr3_4:75353022-75353041 | None:intergenic | 50.0% | |
| AAGCGTGGAGGAACGATTCT+TGG | + | chr3_4:75353023-75353042 | Msa0522290:CDS | 50.0% | |
| AGCGTGGAGGAACGATTCTT+GGG | + | chr3_4:75353024-75353043 | Msa0522290:CDS | 50.0% | |
| AGTTGACAGCATCCAGGATC+GGG | + | chr3_4:75353079-75353098 | Msa0522290:CDS | 50.0% | |
| CCTGATTAATTCCCCGATCC+TGG | - | chr3_4:75353094-75353113 | None:intergenic | 50.0% | |
| CCAGGATCGGGGAATTAATC+AGG | + | chr3_4:75353091-75353110 | Msa0522290:CDS | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr3_4:75353563-75353582 | None:intergenic | 50.0% | |
| GTCATGTGACCGTAAGGTCA+CGG | + | chr3_4:75353585-75353604 | Msa0522290:intron | 50.0% | |
| TCATGTGACCGTAAGGTCAC+GGG | + | chr3_4:75353586-75353605 | Msa0522290:intron | 50.0% | |
| AAGGTCACGGGTTCAAATCC+TGG | + | chr3_4:75353598-75353617 | Msa0522290:intron | 50.0% | |
| ! | TTACACGAGAGGCTGTTTCC+AGG | - | chr3_4:75353619-75353638 | None:intergenic | 50.0% |
| CTAAAGCTCCCGCATATGCA+GGG | - | chr3_4:75353694-75353713 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | - | chr3_4:75353695-75353714 | None:intergenic | 50.0% | |
| GAAAAACAAGGGAAGGGTGG+GGG | - | chr3_4:75354049-75354068 | None:intergenic | 50.0% | |
| GGAAAAACAAGGGAAGGGTG+GGG | - | chr3_4:75354050-75354069 | None:intergenic | 50.0% | |
| GCACAGCGAACATGACAATG+CGG | - | chr3_4:75354184-75354203 | None:intergenic | 50.0% | |
| AATAAGAAAGAACCCGGGGG+GGG | - | chr3_4:75354225-75354244 | None:intergenic | 50.0% | |
| TCAAGGTAGAAGGGTGACTC+TGG | - | chr3_4:75355502-75355521 | None:intergenic | 50.0% | |
| GAGTCACCCTTCTACCTTGA+AGG | + | chr3_4:75355502-75355521 | Msa0522290:CDS | 50.0% | |
| ACCCTTCTACCTTGAAGGGA+AGG | + | chr3_4:75355507-75355526 | Msa0522290:CDS | 50.0% | |
| CCCTTCCCTTCAAGGTAGAA+GGG | - | chr3_4:75355511-75355530 | None:intergenic | 50.0% | |
| CCCTTCTACCTTGAAGGGAA+GGG | + | chr3_4:75355508-75355527 | Msa0522290:CDS | 50.0% | |
| ACCCTTCCCTTCAAGGTAGA+AGG | - | chr3_4:75355512-75355531 | None:intergenic | 50.0% | |
| TTCTACCTTGAAGGGAAGGG+TGG | + | chr3_4:75355511-75355530 | Msa0522290:CDS | 50.0% | |
| AAAGTCCACCCTTCCCTTCA+AGG | - | chr3_4:75355519-75355538 | None:intergenic | 50.0% | |
| CATGCAAGACATGGACCAGA+AGG | + | chr3_4:75355627-75355646 | Msa0522290:CDS | 50.0% | |
| ATGGACCAGAAGGATGCTTC+TGG | + | chr3_4:75355637-75355656 | Msa0522290:CDS | 50.0% | |
| GTGCATTGAGTGGTATGCAG+AGG | - | chr3_4:75356073-75356092 | None:intergenic | 50.0% | |
| CTTGCTCAGAGTGCAGTTCA+TGG | + | chr3_4:75356470-75356489 | Msa0522290:CDS | 50.0% | |
| GAGTGCAGTTCATGGTGCAA+TGG | + | chr3_4:75356478-75356497 | Msa0522290:CDS | 50.0% | |
| CAGTTCATGGTGCAATGGCT+GGG | + | chr3_4:75356483-75356502 | Msa0522290:CDS | 50.0% | |
| GGGTATACTGGATTCACTGC+TGG | + | chr3_4:75356503-75356522 | Msa0522290:CDS | 50.0% | |
| GTCCCCTTCTATCAACTGAG+TGG | - | chr3_4:75357076-75357095 | None:intergenic | 50.0% | |
| AAAATCGTCCATGGCGACGC+TGG | + | chr3_4:75351304-75351323 | Msa0522290:CDS | 55.0% | |
| GTATGTAACCAGCGTCGCCA+TGG | - | chr3_4:75351315-75351334 | None:intergenic | 55.0% | |
| GGAACGTAGTCGGAGAGATG+AGG | - | chr3_4:75351349-75351368 | None:intergenic | 55.0% | |
| ACGATTCTTGGGACATCCCG+AGG | + | chr3_4:75353035-75353054 | Msa0522290:CDS | 55.0% | |
| CGATTCTTGGGACATCCCGA+GGG | + | chr3_4:75353036-75353055 | Msa0522290:CDS | 55.0% | |
| GATTCTTGGGACATCCCGAG+GGG | + | chr3_4:75353037-75353056 | Msa0522290:CDS | 55.0% | |
| ATTCTTGGGACATCCCGAGG+GGG | + | chr3_4:75353038-75353057 | Msa0522290:CDS | 55.0% | |
| GTTGACAGCATCCAGGATCG+GGG | + | chr3_4:75353080-75353099 | Msa0522290:CDS | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr3_4:75353699-75353718 | Msa0522290:intron | 55.0% |
| ATAAGAAAGAACCCGGGGGG+GGG | - | chr3_4:75354224-75354243 | None:intergenic | 55.0% | |
| ACGTTGAGCCTCCTCAACTG+CGG | - | chr3_4:75355179-75355198 | None:intergenic | 55.0% | |
| GAGGAGCTCTCACCAACTAC+AGG | + | chr3_4:75355844-75355863 | Msa0522290:intron | 55.0% | |
| GCAGTTCATGGTGCAATGGC+TGG | + | chr3_4:75356482-75356501 | Msa0522290:CDS | 55.0% | |
| GGTGCAATGGCTGGGTATAC+TGG | + | chr3_4:75356491-75356510 | Msa0522290:CDS | 55.0% | |
| TGCAACTGTCACTGTCAGCG+AGG | - | chr3_4:75357128-75357147 | None:intergenic | 55.0% | |
| CCAGACCCACCTTGACACGT+CGG | + | chr3_4:75351056-75351075 | Msa0522290:five_prime_UTR | 60.0% | |
| CTCTGCCGACGTGTCAAGGT+GGG | - | chr3_4:75351064-75351083 | None:intergenic | 60.0% | |
| TCTGCTCTGCCGACGTGTCA+AGG | - | chr3_4:75351068-75351087 | None:intergenic | 60.0% | |
| ACGTGCAGGACCTCGGCAAA+AGG | + | chr3_4:75352199-75352218 | Msa0522290:CDS | 60.0% | |
| ACATGTGGTGGTCTCTGCCC+TGG | + | chr3_4:75352352-75352371 | Msa0522290:CDS | 60.0% | |
| TTCTTGGGACATCCCGAGGG+GGG | + | chr3_4:75353039-75353058 | Msa0522290:CDS | 60.0% | |
| TGCCAGTATCATGCCCCCCT+CGG | - | chr3_4:75353055-75353074 | None:intergenic | 60.0% | |
| GGAGGAGATGGAACACAGCG+AGG | + | chr3_4:75353280-75353299 | Msa0522290:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr3_4:75353552-75353571 | Msa0522290:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr3_4:75353667-75353686 | Msa0522290:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr3_4:75353682-75353701 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr3_4:75353683-75353702 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr3_4:75353682-75353701 | Msa0522290:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr3_4:75353683-75353702 | Msa0522290:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr3_4:75353700-75353719 | Msa0522290:intron | 60.0% |
| TAAGAAAGAACCCGGGGGGG+GGG | - | chr3_4:75354223-75354242 | None:intergenic | 60.0% | |
| GTGGGTCTGGACCGTTCGTG+TGG | - | chr3_4:75351046-75351065 | None:intergenic | 65.0% | |
| CCGACGTGTCAAGGTGGGTC+TGG | - | chr3_4:75351059-75351078 | None:intergenic | 65.0% | |
| GCTCTGCCGACGTGTCAAGG+TGG | - | chr3_4:75351065-75351084 | None:intergenic | 65.0% | |
| ! | TCCCGAGGGGGGCATGATAC+TGG | + | chr3_4:75353050-75353069 | Msa0522290:CDS | 65.0% |
| GCCAGTATCATGCCCCCCTC+GGG | - | chr3_4:75353054-75353073 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr3_4:75353669-75353688 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr3_4:75353684-75353703 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr3_4:75353688-75353707 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr3_4:75353689-75353708 | None:intergenic | 65.0% | |
| AAGAAAGAACCCGGGGGGGG+GGG | - | chr3_4:75354222-75354241 | None:intergenic | 65.0% | |
| AGAAAGAACCCGGGGGGGGG+GGG | - | chr3_4:75354221-75354240 | None:intergenic | 70.0% | |
| AAAGAACCCGGGGGGGGGGG+GGG | - | chr3_4:75354219-75354238 | None:intergenic | 75.0% | |
| GAAAGAACCCGGGGGGGGGG+GGG | - | chr3_4:75354220-75354239 | None:intergenic | 75.0% | |
| ! | AAGAACCCGGGGGGGGGGGG+GGG | - | chr3_4:75354218-75354237 | None:intergenic | 80.0% |
| ! | AGAACCCGGGGGGGGGGGGG+GGG | - | chr3_4:75354217-75354236 | None:intergenic | 85.0% |
| ! | AACCCGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354215-75354234 | None:intergenic | 90.0% |
| ! | GAACCCGGGGGGGGGGGGGG+GGG | - | chr3_4:75354216-75354235 | None:intergenic | 90.0% |
| ! | ACCCGGGGGGGGGGGGGGGG+GGG | - | chr3_4:75354214-75354233 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 75351040 | 75357554 | 75351040 | ID=Msa0522290;Name=Msa0522290 |
| chr3_4 | mRNA | 75351040 | 75357554 | 75351040 | ID=Msa0522290-mRNA-1;Parent=Msa0522290;Name=Msa0522290-mRNA-1;_AED=0.12;_eAED=0.12;_QI=234|1|1|1|1|1|13|396|519 |
| chr3_4 | exon | 75351040 | 75351378 | 75351040 | ID=Msa0522290-mRNA-1:exon:21542;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75351463 | 75351509 | 75351463 | ID=Msa0522290-mRNA-1:exon:21543;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75351615 | 75351654 | 75351615 | ID=Msa0522290-mRNA-1:exon:21544;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75352158 | 75352220 | 75352158 | ID=Msa0522290-mRNA-1:exon:21545;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75352313 | 75352450 | 75352313 | ID=Msa0522290-mRNA-1:exon:21546;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75352954 | 75353112 | 75352954 | ID=Msa0522290-mRNA-1:exon:21547;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75353268 | 75353321 | 75353268 | ID=Msa0522290-mRNA-1:exon:21548;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75354947 | 75355015 | 75354947 | ID=Msa0522290-mRNA-1:exon:21549;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75355148 | 75355277 | 75355148 | ID=Msa0522290-mRNA-1:exon:21550;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75355443 | 75355708 | 75355443 | ID=Msa0522290-mRNA-1:exon:21551;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75356266 | 75356314 | 75356266 | ID=Msa0522290-mRNA-1:exon:21552;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75356408 | 75356562 | 75356408 | ID=Msa0522290-mRNA-1:exon:21553;Parent=Msa0522290-mRNA-1 |
| chr3_4 | exon | 75356874 | 75357554 | 75356874 | ID=Msa0522290-mRNA-1:exon:21554;Parent=Msa0522290-mRNA-1 |
| chr3_4 | five_prime_UTR | 75351040 | 75351273 | 75351040 | ID=Msa0522290-mRNA-1:five_prime_utr;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75351274 | 75351378 | 75351274 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75351463 | 75351509 | 75351463 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75351615 | 75351654 | 75351615 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75352158 | 75352220 | 75352158 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75352313 | 75352450 | 75352313 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75352954 | 75353112 | 75352954 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75353268 | 75353321 | 75353268 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75354947 | 75355015 | 75354947 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75355148 | 75355277 | 75355148 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75355443 | 75355708 | 75355443 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75356266 | 75356314 | 75356266 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75356408 | 75356562 | 75356408 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | CDS | 75356874 | 75357158 | 75356874 | ID=Msa0522290-mRNA-1:cds;Parent=Msa0522290-mRNA-1 |
| chr3_4 | three_prime_UTR | 75357159 | 75357554 | 75357159 | ID=Msa0522290-mRNA-1:three_prime_utr;Parent=Msa0522290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
