Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190020 | AES63513.2 | 90.467 | 535 | 48 | 3 | 1 | 533 | 1 | 534 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190020 | G7IPP0 | 90.467 | 535 | 48 | 3 | 1 | 533 | 1 | 534 | 0.0 | 836 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008110 | Msa0190020 | 0.818374 | 2.026989e-52 | -8.615850e-47 |
| Msa0090400 | Msa0190020 | 0.801920 | 7.169883e-49 | -8.615850e-47 |
| Msa0137880 | Msa0190020 | 0.801089 | 1.061399e-48 | -8.615850e-47 |
| Msa0149370 | Msa0190020 | 0.821172 | 4.650605e-53 | -8.615850e-47 |
| Msa0190020 | Msa0307770 | 0.883933 | 2.947377e-71 | -8.615850e-47 |
| Msa0190020 | Msa0520890 | 0.807865 | 4.102934e-50 | -8.615850e-47 |
| Msa0190020 | Msa0689520 | 0.813468 | 2.520833e-51 | -8.615850e-47 |
| Msa0190020 | Msa0907910 | 0.884483 | 1.845883e-71 | -8.615850e-47 |
| Msa0190020 | Msa1223470 | 0.813317 | 2.721170e-51 | -8.615850e-47 |
| Msa0190020 | Msa1369550 | 0.812173 | 4.842631e-51 | -8.615850e-47 |
| Msa0190020 | Msa1430920 | 0.877909 | 4.305612e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190020 | MtrunA17_Chr2g0279591 | 90.467 | 535 | 48 | 3 | 1 | 533 | 1 | 534 | 0.0 | 836 |
| Msa0190020 | MtrunA17_Chr4g0049941 | 51.845 | 542 | 199 | 15 | 1 | 533 | 1 | 489 | 1.06e-153 | 448 |
| Msa0190020 | MtrunA17_Chr5g0427371 | 46.715 | 137 | 73 | 0 | 1 | 137 | 1 | 137 | 4.77e-36 | 137 |
| Msa0190020 | MtrunA17_Chr5g0427371 | 45.070 | 71 | 29 | 3 | 242 | 309 | 186 | 249 | 3.58e-13 | 70.9 |
| Msa0190020 | MtrunA17_Chr3g0132971 | 44.030 | 134 | 72 | 1 | 4 | 134 | 3 | 136 | 7.54e-31 | 119 |
| Msa0190020 | MtrunA17_Chr3g0132971 | 48.529 | 68 | 27 | 2 | 243 | 309 | 148 | 208 | 1.29e-16 | 79.3 |
| Msa0190020 | MtrunA17_Chr3g0126501 | 25.965 | 285 | 158 | 4 | 1 | 285 | 1 | 232 | 4.79e-24 | 106 |
| Msa0190020 | MtrunA17_Chr6g0476751 | 26.786 | 280 | 149 | 6 | 5 | 284 | 4 | 227 | 5.74e-24 | 106 |
| Msa0190020 | MtrunA17_Chr3g0132181 | 29.670 | 273 | 172 | 6 | 16 | 282 | 29 | 287 | 6.95e-24 | 106 |
| Msa0190020 | MtrunA17_Chr2g0286511 | 26.978 | 278 | 149 | 6 | 5 | 279 | 4 | 230 | 6.21e-20 | 94.0 |
| Msa0190020 | MtrunA17_Chr4g0066631 | 34.932 | 146 | 93 | 2 | 5 | 149 | 4 | 148 | 1.74e-17 | 86.3 |
| Msa0190020 | MtrunA17_Chr5g0447431 | 34.146 | 123 | 80 | 1 | 4 | 126 | 3 | 124 | 1.80e-16 | 82.8 |
| Msa0190020 | MtrunA17_Chr8g0367601 | 38.356 | 73 | 41 | 1 | 237 | 309 | 140 | 208 | 3.62e-13 | 69.7 |
| Msa0190020 | MtrunA17_Chr8g0367601 | 34.677 | 124 | 77 | 3 | 13 | 132 | 13 | 136 | 4.67e-12 | 66.2 |
| Msa0190020 | MtrunA17_Chr3g0120851 | 31.667 | 120 | 81 | 1 | 4 | 123 | 3 | 121 | 9.30e-13 | 70.9 |
| Msa0190020 | MtrunA17_Chr1g0178901 | 31.783 | 129 | 86 | 2 | 5 | 132 | 4 | 131 | 1.23e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190020 | AT5G64360.5 | 36.262 | 535 | 241 | 13 | 8 | 531 | 17 | 462 | 1.66e-90 | 285 |
| Msa0190020 | AT5G64360.7 | 36.262 | 535 | 241 | 13 | 8 | 531 | 17 | 462 | 1.66e-90 | 285 |
| Msa0190020 | AT5G64360.6 | 36.262 | 535 | 241 | 13 | 8 | 531 | 17 | 462 | 1.66e-90 | 285 |
| Msa0190020 | AT5G64360.3 | 36.262 | 535 | 241 | 13 | 8 | 531 | 17 | 462 | 1.66e-90 | 285 |
| Msa0190020 | AT5G64360.2 | 36.262 | 535 | 241 | 13 | 8 | 531 | 17 | 462 | 1.66e-90 | 285 |
| Msa0190020 | AT5G64360.4 | 36.262 | 535 | 241 | 13 | 8 | 531 | 17 | 462 | 1.66e-90 | 285 |
| Msa0190020 | AT5G64360.1 | 34.906 | 530 | 213 | 13 | 8 | 531 | 17 | 420 | 7.52e-86 | 272 |
| Msa0190020 | AT5G09540.1 | 48.120 | 133 | 66 | 2 | 5 | 134 | 10 | 142 | 1.90e-33 | 129 |
| Msa0190020 | AT5G09540.1 | 43.617 | 94 | 40 | 3 | 240 | 332 | 168 | 249 | 1.18e-19 | 89.7 |
| Msa0190020 | AT1G62970.1 | 47.727 | 132 | 64 | 2 | 8 | 134 | 17 | 148 | 1.59e-32 | 133 |
| Msa0190020 | AT1G62970.1 | 33.588 | 131 | 68 | 5 | 219 | 345 | 620 | 735 | 8.77e-17 | 84.3 |
| Msa0190020 | AT2G01710.1 | 48.529 | 136 | 65 | 2 | 5 | 135 | 7 | 142 | 8.86e-32 | 125 |
| Msa0190020 | AT2G01710.1 | 49.296 | 71 | 28 | 2 | 242 | 311 | 165 | 228 | 3.90e-18 | 85.9 |
| Msa0190020 | AT2G01710.2 | 48.529 | 136 | 65 | 2 | 5 | 135 | 51 | 186 | 5.72e-31 | 124 |
| Msa0190020 | AT2G01710.2 | 49.296 | 71 | 28 | 2 | 242 | 311 | 209 | 272 | 7.23e-18 | 85.9 |
| Msa0190020 | AT5G37380.8 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G37380.4 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G37380.7 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G37380.2 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G37380.6 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G37380.1 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G37380.5 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G37380.3 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G37380.9 | 28.428 | 299 | 171 | 6 | 5 | 282 | 4 | 280 | 1.65e-30 | 124 |
| Msa0190020 | AT5G53150.5 | 26.619 | 278 | 154 | 7 | 5 | 276 | 4 | 237 | 1.23e-22 | 102 |
| Msa0190020 | AT5G53150.4 | 26.619 | 278 | 154 | 7 | 5 | 276 | 4 | 237 | 1.24e-22 | 102 |
| Msa0190020 | AT5G53150.1 | 26.619 | 278 | 154 | 7 | 5 | 276 | 4 | 237 | 1.24e-22 | 102 |
| Msa0190020 | AT5G53150.3 | 26.619 | 278 | 154 | 7 | 5 | 276 | 4 | 237 | 1.29e-22 | 102 |
| Msa0190020 | AT5G53150.6 | 26.619 | 278 | 154 | 7 | 5 | 276 | 4 | 237 | 1.29e-22 | 102 |
| Msa0190020 | AT5G53150.2 | 26.619 | 278 | 154 | 7 | 5 | 276 | 4 | 237 | 1.29e-22 | 102 |
| Msa0190020 | AT3G06340.2 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.27e-18 | 89.7 |
| Msa0190020 | AT3G06340.4 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.27e-18 | 89.7 |
| Msa0190020 | AT3G06340.3 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.27e-18 | 89.7 |
| Msa0190020 | AT3G06340.1 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.27e-18 | 89.7 |
| Msa0190020 | AT1G62970.2 | 35.398 | 113 | 55 | 4 | 236 | 345 | 483 | 580 | 8.24e-17 | 84.3 |
| Msa0190020 | AT4G19570.1 | 30.380 | 158 | 104 | 2 | 4 | 156 | 3 | 159 | 6.00e-16 | 81.3 |
| Msa0190020 | AT2G05230.1 | 34.146 | 123 | 80 | 1 | 6 | 128 | 5 | 126 | 6.70e-15 | 78.2 |
| Msa0190020 | AT2G05250.1 | 34.146 | 123 | 80 | 1 | 6 | 128 | 5 | 126 | 6.70e-15 | 78.2 |
| Msa0190020 | AT2G25560.1 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 9.21e-15 | 77.8 |
| Msa0190020 | AT3G04980.2 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 2.78e-14 | 76.6 |
| Msa0190020 | AT3G04980.3 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 2.78e-14 | 76.6 |
| Msa0190020 | AT4G19580.1 | 34.188 | 117 | 76 | 1 | 5 | 121 | 4 | 119 | 1.80e-13 | 72.0 |
| Msa0190020 | AT3G04980.1 | 35.455 | 110 | 70 | 1 | 20 | 129 | 1 | 109 | 2.73e-13 | 73.6 |
| Msa0190020 | AT4G19590.3 | 32.812 | 128 | 84 | 2 | 5 | 131 | 4 | 130 | 2.25e-12 | 68.9 |
| Msa0190020 | AT4G19590.2 | 32.812 | 128 | 84 | 2 | 5 | 131 | 4 | 130 | 2.60e-12 | 68.9 |
| Msa0190020 | AT4G19590.1 | 32.479 | 117 | 77 | 2 | 16 | 131 | 4 | 119 | 6.34e-11 | 64.3 |
Find 189 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAGAGGTGCTGGAAATT+TGG | 0.166054 | 2_1:-5464884 | Msa0190020:CDS |
| AAACTGACGGTCAAACTTTC+TGG | 0.186075 | 2_1:-5465554 | Msa0190020:CDS |
| CTTATGAGGATTTGAGAAAA+TGG | 0.235667 | 2_1:+5465914 | None:intergenic |
| AGGCCCAGGCCGGAGTCTGC+TGG | 0.259644 | 2_1:-5465591 | Msa0190020:CDS |
| CATTGGTTGACCTAGGGTTT+TGG | 0.291648 | 2_1:+5465688 | None:intergenic |
| AGGAGAGGTGCTGGAAATTT+GGG | 0.299385 | 2_1:-5464883 | Msa0190020:CDS |
| TCATGATCATAATAACTAAA+AGG | 0.301913 | 2_1:+5465231 | None:intergenic |
| TGCTGGAAATTTGGGTAAGT+TGG | 0.320594 | 2_1:-5464875 | Msa0190020:CDS |
| TCCTCATCAATCACCCTAAC+AGG | 0.328433 | 2_1:+5465663 | None:intergenic |
| AAGCAAACGGGTTACGGTTC+GGG | 0.334461 | 2_1:+5465976 | None:intergenic |
| GCAGACTCCGGCCTGGGCCT+AGG | 0.344007 | 2_1:+5465594 | None:intergenic |
| CGCCCGTTCCTTCGCCATTC+GGG | 0.353379 | 2_1:-5466183 | Msa0190020:CDS |
| GGTGGTTGTGGTTGCGGCGG+TGG | 0.354538 | 2_1:+5465846 | None:intergenic |
| GTCAATGCTGGTGAGTCTAC+TGG | 0.357599 | 2_1:-5465618 | Msa0190020:CDS |
| GGTCAACCAATGAACCTGTT+AGG | 0.359838 | 2_1:-5465677 | Msa0190020:CDS |
| GCGCCCGTTCCTTCGCCATT+CGG | 0.370967 | 2_1:-5466184 | Msa0190020:CDS |
| AGCCCCAGCAGACTCCGGCC+TGG | 0.373358 | 2_1:+5465587 | None:intergenic |
| CAGGGGAACGTGAACGGGAC+AGG | 0.374674 | 2_1:-5464796 | Msa0190020:CDS |
| AATCACCCTAACAGGTTCAT+TGG | 0.383228 | 2_1:+5465671 | None:intergenic |
| GGTGGTGGTGGTTGTGGTTG+CGG | 0.384861 | 2_1:+5465840 | None:intergenic |
| TGCTGTGGATGTGGTGGTGG+TGG | 0.386613 | 2_1:+5465825 | None:intergenic |
| GGCCCAGGCCGGAGTCTGCT+GGG | 0.387098 | 2_1:-5465590 | Msa0190020:CDS |
| GCCCCAGCAGACTCCGGCCT+GGG | 0.390143 | 2_1:+5465588 | None:intergenic |
| TCTCTCTTGTTCACGATGCT+TGG | 0.391599 | 2_1:-5465938 | Msa0190020:CDS |
| GGTTGTGGTTGCGGCGGTGG+TGG | 0.399199 | 2_1:+5465849 | None:intergenic |
| TGTGGTTGCGGCGGTGGTGG+TGG | 0.399655 | 2_1:+5465852 | None:intergenic |
| TCATACAAAGCTTTCTTATG+AGG | 0.399685 | 2_1:+5465900 | None:intergenic |
| TTCTTCTTCGCACCATTCAT+AGG | 0.404699 | 2_1:+5465267 | None:intergenic |
| AAGAGAAGAAGAGGGGCTTT+CGG | 0.409020 | 2_1:-5465102 | Msa0190020:CDS |
| TCTGCAACAACATTAAGAAT+TGG | 0.411978 | 2_1:+5464706 | None:intergenic |
| TGCCCGAATGGCGAAGGAAC+GGG | 0.412075 | 2_1:+5466181 | None:intergenic |
| TTCTGCTAGTGGAGTGAGAC+AGG | 0.412907 | 2_1:-5464815 | Msa0190020:CDS |
| TCAACATTTGACACCATTGC+AGG | 0.413719 | 2_1:+5464940 | None:intergenic |
| TGTGGATGTGGTGGTGGTGG+TGG | 0.414191 | 2_1:+5465828 | None:intergenic |
| GGGGCTTTCGGTGGTGGTGG+TGG | 0.416918 | 2_1:-5465090 | Msa0190020:CDS |
| TAAGCAAACGGGTTACGGTT+CGG | 0.421723 | 2_1:+5465975 | None:intergenic |
| AGGATAATATTGAAGGGATT+GGG | 0.422331 | 2_1:-5464765 | Msa0190020:CDS |
| AAATGCTGTGGTTGCGGTTG+TGG | 0.425742 | 2_1:+5465771 | None:intergenic |
| CAGCATAAGCAAACGGGTTA+CGG | 0.426424 | 2_1:+5465970 | None:intergenic |
| TAAGAATTGGCAAGCTACTA+AGG | 0.428199 | 2_1:+5464719 | None:intergenic |
| ACGGCCTGTCCTTACTGTTA+TGG | 0.430147 | 2_1:-5465531 | Msa0190020:CDS |
| AGTCTACTGGGCCTAGGCCC+AGG | 0.432183 | 2_1:-5465605 | Msa0190020:CDS |
| CCTACCCATCCTACTCCCTT+TGG | 0.432200 | 2_1:+5465134 | None:intergenic |
| GGATATCAATGGGTCTTCTT+CGG | 0.433579 | 2_1:-5465322 | Msa0190020:CDS |
| TTCTTTGATTCTAGCTTCAC+CGG | 0.434187 | 2_1:+5466094 | None:intergenic |
| TGAGACAGGGGAACGTGAAC+GGG | 0.436741 | 2_1:-5464801 | Msa0190020:CDS |
| AGTTCAGTGGCTTCGAATCT+CGG | 0.439160 | 2_1:+5466146 | None:intergenic |
| GGAGACCAATTGAGAGGCCT+AGG | 0.439545 | 2_1:-5465056 | Msa0190020:CDS |
| GAGGATAATATTGAAGGGAT+TGG | 0.440885 | 2_1:-5464766 | Msa0190020:CDS |
| GTTCAGTGGCTTCGAATCTC+GGG | 0.442981 | 2_1:+5466147 | None:intergenic |
| CGGGCACCACCGGAGGTGAC+TGG | 0.443466 | 2_1:-5465426 | Msa0190020:CDS |
| GAAGGAGGAAGAGAAGAAGA+GGG | 0.444043 | 2_1:-5465110 | Msa0190020:CDS |
| TTGTTTCATTGCCCTATGAA+TGG | 0.444185 | 2_1:-5465279 | Msa0190020:CDS |
| CTGGTGAGTCTACTGGGCCT+AGG | 0.451838 | 2_1:-5465611 | Msa0190020:CDS |
| GTAGGATGGGTAGGAGAAGG+AGG | 0.454601 | 2_1:-5465125 | Msa0190020:CDS |
| CCCCTCCTAGGCCTCTCAAT+TGG | 0.455567 | 2_1:+5465051 | None:intergenic |
| AGAAGAGGGGCTTTCGGTGG+TGG | 0.455780 | 2_1:-5465096 | Msa0190020:CDS |
| GCATGAGCAGCATAAGCAAA+CGG | 0.469281 | 2_1:+5465963 | None:intergenic |
| ACGGGTTACGGTTCGGGTCA+AGG | 0.470734 | 2_1:+5465982 | None:intergenic |
| GGAGTAGGATGGGTAGGAGA+AGG | 0.475139 | 2_1:-5465128 | Msa0190020:CDS |
| TCCGGTGTCAGAATTGTAAG+AGG | 0.475899 | 2_1:-5465470 | Msa0190020:CDS |
| AGTTTGACCGTCAGTTTCAC+CGG | 0.476193 | 2_1:+5465560 | None:intergenic |
| GGTGATTGGCGGGGTACCAA+AGG | 0.477928 | 2_1:-5465150 | Msa0190020:CDS |
| GGTGGTAAAGGAAATTGAAT+AGG | 0.479480 | 2_1:+5465792 | None:intergenic |
| GGTTTGAGAAGGAGAGGTGC+TGG | 0.480995 | 2_1:-5464892 | Msa0190020:CDS |
| TGATACCTGTGCAGCGTTCG+CGG | 0.484855 | 2_1:-5465211 | Msa0190020:CDS |
| GTGCAATCAACGTAAACCTT+AGG | 0.485929 | 2_1:+5465495 | None:intergenic |
| CCGTCTTCTCCAGTCACCTC+CGG | 0.487601 | 2_1:+5465417 | None:intergenic |
| ACGCGCGCTGAGGAGTTTGT+TGG | 0.488952 | 2_1:+5466217 | None:intergenic |
| AGAGGGGCTTTCGGTGGTGG+TGG | 0.490281 | 2_1:-5465093 | Msa0190020:CDS |
| CATGAGCAGCATAAGCAAAC+GGG | 0.491884 | 2_1:+5465964 | None:intergenic |
| GAGTCTGCTGGGGCTAAGCC+CGG | 0.494733 | 2_1:-5465579 | Msa0190020:CDS |
| TGTTGCTGTGGATGTGGTGG+TGG | 0.498810 | 2_1:+5465822 | None:intergenic |
| AGAAGGAGGAAGAGAAGAAG+AGG | 0.499015 | 2_1:-5465111 | Msa0190020:CDS |
| CAATTGAGAGGCCTAGGAGG+GGG | 0.504720 | 2_1:-5465050 | Msa0190020:CDS |
| TGGCATGTTTGAGTATCCTA+AGG | 0.510841 | 2_1:-5465511 | Msa0190020:CDS |
| TCAATGCTGGTGAGTCTACT+GGG | 0.514127 | 2_1:-5465617 | Msa0190020:CDS |
| TACTGGGCCTAGGCCCAGGC+CGG | 0.518600 | 2_1:-5465601 | Msa0190020:CDS |
| GACGGTGACGAGGGAGAGGT+TGG | 0.518695 | 2_1:-5465399 | Msa0190020:CDS |
| CAGGTTCATTGGTTGACCTA+GGG | 0.520104 | 2_1:+5465682 | None:intergenic |
| TGCGGTTGTTGCTGTGGATG+TGG | 0.520536 | 2_1:+5465816 | None:intergenic |
| GTGGTGGTGGTGATGTTGAA+AGG | 0.520802 | 2_1:-5465077 | Msa0190020:CDS |
| TCTTCTTCGCACCATTCATA+GGG | 0.520934 | 2_1:+5465268 | None:intergenic |
| AAGCTCCGCGAACGCTGCAC+AGG | 0.521459 | 2_1:+5465206 | None:intergenic |
| GTCGGATTCTTGTGCCCGAA+TGG | 0.522206 | 2_1:+5466169 | None:intergenic |
| GTCAACCAATGAACCTGTTA+GGG | 0.524013 | 2_1:-5465676 | Msa0190020:CDS |
| GGCTTAGCCCCAGCAGACTC+CGG | 0.527248 | 2_1:+5465582 | None:intergenic |
| ATGATAGCAGTGATGGTGAT+TGG | 0.532126 | 2_1:-5465164 | Msa0190020:CDS |
| AGTGGTAGTACGGGCACCAC+CGG | 0.535051 | 2_1:-5465436 | Msa0190020:CDS |
| CTGTGGTGGGTGGTTTGAGA+AGG | 0.537878 | 2_1:-5464903 | Msa0190020:CDS |
| GTGATTGGCGGGGTACCAAA+GGG | 0.538758 | 2_1:-5465149 | Msa0190020:CDS |
| TGCTACTTCTGTGCCTGCAA+TGG | 0.539629 | 2_1:-5464953 | Msa0190020:CDS |
| GTGGAAGAAGCTTCTGCTAG+TGG | 0.544361 | 2_1:-5464826 | Msa0190020:CDS |
| AAAGGAAATTGAATAGGTTG+CGG | 0.545323 | 2_1:+5465798 | None:intergenic |
| GTGGGTGGTTTGAGAAGGAG+AGG | 0.546300 | 2_1:-5464898 | Msa0190020:CDS |
| GGTAAGAAGGCTGTGGTGGG+TGG | 0.548348 | 2_1:-5464913 | Msa0190020:CDS |
| GTGAGACAGGGGAACGTGAA+CGG | 0.549407 | 2_1:-5464802 | Msa0190020:CDS |
| ATAGCGAAGGATTTGAAGAA+TGG | 0.549445 | 2_1:+5466055 | None:intergenic |
| AAATTCCCACTAAACCCTAA+AGG | 0.552901 | 2_1:+5465348 | None:intergenic |
| CGTGTAAGTCACGCGCGCTG+AGG | 0.553465 | 2_1:+5466207 | None:intergenic |
| GACCAATTGAGAGGCCTAGG+AGG | 0.554781 | 2_1:-5465053 | Msa0190020:CDS |
| ACAGGTTCATTGGTTGACCT+AGG | 0.556407 | 2_1:+5465681 | None:intergenic |
| AATGCCGAGGATAATATTGA+AGG | 0.557483 | 2_1:-5464772 | Msa0190020:CDS |
| TTCTTGTGCCCGAATGGCGA+AGG | 0.557741 | 2_1:+5466175 | None:intergenic |
| GCGAAGAAGAATGCTCGGAA+GGG | 0.558035 | 2_1:-5465255 | Msa0190020:CDS |
| ACCAATTGAGAGGCCTAGGA+GGG | 0.558221 | 2_1:-5465052 | Msa0190020:CDS |
| TAGCAGTGATGGTGATTGGC+GGG | 0.559217 | 2_1:-5465160 | Msa0190020:CDS |
| TGCAAGACGGCGATATTGAT+CGG | 0.559726 | 2_1:+5466010 | None:intergenic |
| TTGATGAGGAACAAAACAAT+GGG | 0.559786 | 2_1:-5465650 | Msa0190020:CDS |
| AGAAGACGGTGACGAGGGAG+AGG | 0.562730 | 2_1:-5465403 | Msa0190020:CDS |
| CGAAGAAGAATGCTCGGAAG+GGG | 0.563521 | 2_1:-5465254 | Msa0190020:CDS |
| TCAAACATGCCATAACAGTA+AGG | 0.564616 | 2_1:+5465522 | None:intergenic |
| AGGGGAACGTGAACGGGACA+GGG | 0.565414 | 2_1:-5464795 | Msa0190020:CDS |
| TCAATGGGTCTTCTTCGGAA+TGG | 0.566181 | 2_1:-5465317 | Msa0190020:CDS |
| GGTGACGAGGGAGAGGTTGG+TGG | 0.566487 | 2_1:-5465396 | Msa0190020:CDS |
| TAATGTTGTTGCAGATGACA+AGG | 0.568155 | 2_1:-5464698 | Msa0190020:CDS |
| GCCCAGGCCGGAGTCTGCTG+GGG | 0.569311 | 2_1:-5465589 | Msa0190020:CDS |
| CAATGAAACAAAGCAGACAT+AGG | 0.570623 | 2_1:+5465291 | None:intergenic |
| GTGCCCGAATGGCGAAGGAA+CGG | 0.570710 | 2_1:+5466180 | None:intergenic |
| AGCTGGTAAGAAGGCTGTGG+TGG | 0.571053 | 2_1:-5464917 | Msa0190020:CDS |
| GGTTGCGGTTGTGGTGGTAA+AGG | 0.574236 | 2_1:+5465780 | None:intergenic |
| TGCGAAGAAGAATGCTCGGA+AGG | 0.575964 | 2_1:-5465256 | Msa0190020:CDS |
| TGCTGTGGTTGCGGTTGTGG+TGG | 0.579718 | 2_1:+5465774 | None:intergenic |
| GAGAATGACAATGGTGGTGG+TGG | 0.580037 | 2_1:-5465006 | Msa0190020:CDS |
| AATCCCTTCAATATTATCCT+CGG | 0.583636 | 2_1:+5464768 | None:intergenic |
| GGATGAAAATGCTGTGGTTG+CGG | 0.583652 | 2_1:+5465765 | None:intergenic |
| GACTGGAGAAGACGGTGACG+AGG | 0.583753 | 2_1:-5465409 | Msa0190020:CDS |
| CCAAAGGGAGTAGGATGGGT+AGG | 0.584383 | 2_1:-5465134 | Msa0190020:CDS |
| GGTGGTGGTTGTGGTTGCGG+CGG | 0.586913 | 2_1:+5465843 | None:intergenic |
| GGTACCAAAGGGAGTAGGAT+GGG | 0.588927 | 2_1:-5465138 | Msa0190020:CDS |
| AAATGTTGAAGCTGGTAAGA+AGG | 0.589973 | 2_1:-5464926 | Msa0190020:CDS |
| AAGGAGGAAGAGAAGAAGAG+GGG | 0.592224 | 2_1:-5465109 | Msa0190020:CDS |
| ATGCCGAGGATAATATTGAA+GGG | 0.593077 | 2_1:-5464771 | Msa0190020:CDS |
| CCGGAGGTGACTGGAGAAGA+CGG | 0.593141 | 2_1:-5465417 | Msa0190020:CDS |
| ATAGGTTGCGGTTGTTGCTG+TGG | 0.593211 | 2_1:+5465810 | None:intergenic |
| GGGTAAGTTGGATTTGAATG+TGG | 0.594650 | 2_1:-5464863 | Msa0190020:CDS |
| ATTGATGAGGAACAAAACAA+TGG | 0.595375 | 2_1:-5465651 | Msa0190020:CDS |
| AGCCACTGAACTTCTTCTTG+CGG | 0.598213 | 2_1:-5466135 | Msa0190020:CDS |
| TCTGCTAGTGGAGTGAGACA+GGG | 0.598631 | 2_1:-5464814 | Msa0190020:CDS |
| GGGTACCAAAGGGAGTAGGA+TGG | 0.600804 | 2_1:-5465139 | Msa0190020:CDS |
| CCCTCTTACAATTCTGACAC+CGG | 0.604834 | 2_1:+5465469 | None:intergenic |
| CCGGTGTCAGAATTGTAAGA+GGG | 0.604978 | 2_1:-5465469 | Msa0190020:CDS |
| CCAATTGAGAGGCCTAGGAG+GGG | 0.606765 | 2_1:-5465051 | Msa0190020:CDS |
| GGGCCGAGTCATGTCAATGC+TGG | 0.607739 | 2_1:-5465630 | Msa0190020:CDS |
| CTCAGCGCGCGTGACTTACA+CGG | 0.610260 | 2_1:-5466206 | Msa0190020:CDS |
| AATTGAGAGGCCTAGGAGGG+GGG | 0.610392 | 2_1:-5465049 | Msa0190020:CDS |
| TTGACTTGAACAGAAGGAGG+AGG | 0.615506 | 2_1:+5465744 | None:intergenic |
| CAATATTCTGAGTATAGCGA+AGG | 0.617357 | 2_1:+5466042 | None:intergenic |
| TTGTCGTTGACTTGAACAGA+AGG | 0.617497 | 2_1:+5465738 | None:intergenic |
| ATGGTGTCAAATGTTGAAGC+TGG | 0.617929 | 2_1:-5464934 | Msa0190020:CDS |
| GTTTGACCGTCAGTTTCACC+GGG | 0.617980 | 2_1:+5465561 | None:intergenic |
| GCTAAGCCCGGTGAAACTGA+CGG | 0.618764 | 2_1:-5465567 | Msa0190020:CDS |
| TCACCAGCATTGACATGACT+CGG | 0.621622 | 2_1:+5465627 | None:intergenic |
| TCGTTGACTTGAACAGAAGG+AGG | 0.624401 | 2_1:+5465741 | None:intergenic |
| TTTACGTTGATTGCACACTC+CGG | 0.627775 | 2_1:-5465488 | Msa0190020:CDS |
| GGCGGGGTACCAAAGGGAGT+AGG | 0.631128 | 2_1:-5465143 | Msa0190020:CDS |
| GTTATCGACACTCTCTTAGC+CGG | 0.631145 | 2_1:-5466113 | Msa0190020:CDS |
| TGACAATGTGGTTGATGATG+AGG | 0.631213 | 2_1:-5464983 | Msa0190020:CDS |
| GCTGGTAAGAAGGCTGTGGT+GGG | 0.632182 | 2_1:-5464916 | Msa0190020:CDS |
| TCTTCTCCAGTCACCTCCGG+TGG | 0.632382 | 2_1:+5465420 | None:intergenic |
| TGAATGGATGGAAGCAACAG+AGG | 0.633889 | 2_1:-5466266 | Msa0190020:CDS |
| AGTGGCTTCGAATCTCGGGT+CGG | 0.636739 | 2_1:+5466151 | None:intergenic |
| GGTAGTACGGGCACCACCGG+AGG | 0.640935 | 2_1:-5465433 | Msa0190020:CDS |
| ATAGCAGTGATGGTGATTGG+CGG | 0.641839 | 2_1:-5465161 | Msa0190020:CDS |
| CATGCCATAACAGTAAGGAC+AGG | 0.644058 | 2_1:+5465527 | None:intergenic |
| ATGGTGCGAAGAAGAATGCT+CGG | 0.644458 | 2_1:-5465260 | Msa0190020:CDS |
| TTGAAAGGAGACCAATTGAG+AGG | 0.647944 | 2_1:-5465062 | Msa0190020:CDS |
| GATGATGATGATAGCAGTGA+TGG | 0.649786 | 2_1:-5465171 | Msa0190020:CDS |
| AGAAGAAGAGGGGCTTTCGG+TGG | 0.650803 | 2_1:-5465099 | Msa0190020:CDS |
| GCTGAGAATGACAATGGTGG+TGG | 0.654227 | 2_1:-5465009 | Msa0190020:CDS |
| TGACGGTCAAACTTTCTGGA+CGG | 0.654449 | 2_1:-5465550 | Msa0190020:CDS |
| CTGCTAGTGGAGTGAGACAG+GGG | 0.659459 | 2_1:-5464813 | Msa0190020:CDS |
| GGTCAAGGAGGATTGCAAGA+CGG | 0.660142 | 2_1:+5465997 | None:intergenic |
| ACTGGAGAAGACGGTGACGA+GGG | 0.666817 | 2_1:-5465408 | Msa0190020:CDS |
| TGTGGAGTTCAGCAATGAGG+TGG | 0.670708 | 2_1:-5464845 | Msa0190020:CDS |
| AACCGCAAGAAGAAGTTCAG+TGG | 0.670841 | 2_1:+5466133 | None:intergenic |
| GGTTGTTGCTGTGGATGTGG+TGG | 0.676015 | 2_1:+5465819 | None:intergenic |
| CGGTGTCAGAATTGTAAGAG+GGG | 0.678004 | 2_1:-5465468 | Msa0190020:CDS |
| GGTTACGGTTCGGGTCAAGG+AGG | 0.679710 | 2_1:+5465985 | None:intergenic |
| TGAAGCTGGTAAGAAGGCTG+TGG | 0.683764 | 2_1:-5464920 | Msa0190020:CDS |
| GGAGGAGGATGAAAATGCTG+TGG | 0.684139 | 2_1:+5465759 | None:intergenic |
| AGCAGTGATGGTGATTGGCG+GGG | 0.685255 | 2_1:-5465159 | Msa0190020:CDS |
| ACAGAGGTGAAGCTGAACGA+TGG | 0.691288 | 2_1:-5466250 | Msa0190020:CDS |
| TGGTGGTGGTGGTGACAATG+TGG | 0.696568 | 2_1:-5464995 | Msa0190020:CDS |
| ACCTGTTAGGGTGATTGATG+AGG | 0.704254 | 2_1:-5465664 | Msa0190020:CDS |
| GGTAATGCTGAGAATGACAA+TGG | 0.707753 | 2_1:-5465015 | Msa0190020:CDS |
| GAATGTGGAGTTCAGCAATG+AGG | 0.710179 | 2_1:-5464848 | Msa0190020:CDS |
| GAACGGGACAGGGAATGCCG+AGG | 0.720567 | 2_1:-5464785 | Msa0190020:CDS |
| AATGCTGAGAATGACAATGG+TGG | 0.774129 | 2_1:-5465012 | Msa0190020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATGATCATAATAACTAAA+AGG | + | chr2_1:5465719-5465738 | None:intergenic | 20.0% |
| !! | TCATGATCATAATAACTAAA+AGG | + | chr2_1:5465719-5465738 | None:intergenic | 20.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | - | chr2_1:5465615-5465634 | Msa0190020:CDS | 25.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | - | chr2_1:5465615-5465634 | Msa0190020:CDS | 25.0% |
| CTTATGAGGATTTGAGAAAA+TGG | + | chr2_1:5465036-5465055 | None:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | + | chr2_1:5465050-5465069 | None:intergenic | 30.0% | |
| AAAGGAAATTGAATAGGTTG+CGG | + | chr2_1:5465152-5465171 | None:intergenic | 30.0% | |
| ATTGATGAGGAACAAAACAA+TGG | - | chr2_1:5465296-5465315 | Msa0190020:CDS | 30.0% | |
| TTGATGAGGAACAAAACAAT+GGG | - | chr2_1:5465297-5465316 | Msa0190020:CDS | 30.0% | |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | - | chr2_1:5465594-5465613 | Msa0190020:CDS | 30.0% |
| !! | GGGAATTTTAAGGATATCAA+TGG | - | chr2_1:5465614-5465633 | Msa0190020:CDS | 30.0% |
| AATCCCTTCAATATTATCCT+CGG | + | chr2_1:5466182-5466201 | None:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | - | chr2_1:5466182-5466201 | Msa0190020:CDS | 30.0% | |
| TCTGCAACAACATTAAGAAT+TGG | + | chr2_1:5466244-5466263 | None:intergenic | 30.0% | |
| CTTATGAGGATTTGAGAAAA+TGG | + | chr2_1:5465036-5465055 | None:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | + | chr2_1:5465050-5465069 | None:intergenic | 30.0% | |
| AAAGGAAATTGAATAGGTTG+CGG | + | chr2_1:5465152-5465171 | None:intergenic | 30.0% | |
| ATTGATGAGGAACAAAACAA+TGG | - | chr2_1:5465296-5465315 | Msa0190020:CDS | 30.0% | |
| TTGATGAGGAACAAAACAAT+GGG | - | chr2_1:5465297-5465316 | Msa0190020:CDS | 30.0% | |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | - | chr2_1:5465594-5465613 | Msa0190020:CDS | 30.0% |
| !! | GGGAATTTTAAGGATATCAA+TGG | - | chr2_1:5465614-5465633 | Msa0190020:CDS | 30.0% |
| AATCCCTTCAATATTATCCT+CGG | + | chr2_1:5466182-5466201 | None:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | - | chr2_1:5466182-5466201 | Msa0190020:CDS | 30.0% | |
| TCTGCAACAACATTAAGAAT+TGG | + | chr2_1:5466244-5466263 | None:intergenic | 30.0% | |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | + | chr2_1:5464856-5464875 | None:intergenic | 35.0% |
| ATAGCGAAGGATTTGAAGAA+TGG | + | chr2_1:5464895-5464914 | None:intergenic | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | + | chr2_1:5464908-5464927 | None:intergenic | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | + | chr2_1:5465158-5465177 | None:intergenic | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | - | chr2_1:5465249-5465268 | Msa0190020:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | + | chr2_1:5465428-5465447 | None:intergenic | 35.0% | |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | - | chr2_1:5465570-5465589 | Msa0190020:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | - | chr2_1:5465593-5465612 | Msa0190020:CDS | 35.0% |
| AAATTCCCACTAAACCCTAA+AGG | + | chr2_1:5465602-5465621 | None:intergenic | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | - | chr2_1:5465604-5465623 | Msa0190020:CDS | 35.0% |
| CAATGAAACAAAGCAGACAT+AGG | + | chr2_1:5465659-5465678 | None:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | - | chr2_1:5465668-5465687 | Msa0190020:CDS | 35.0% | |
| AAATGTTGAAGCTGGTAAGA+AGG | - | chr2_1:5466021-5466040 | Msa0190020:CDS | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | - | chr2_1:5466175-5466194 | Msa0190020:CDS | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | - | chr2_1:5466176-5466195 | Msa0190020:CDS | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | - | chr2_1:5466181-5466200 | Msa0190020:CDS | 35.0% | |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | - | chr2_1:5466194-5466213 | Msa0190020:CDS | 35.0% |
| TAAGAATTGGCAAGCTACTA+AGG | + | chr2_1:5466231-5466250 | None:intergenic | 35.0% | |
| TAATGTTGTTGCAGATGACA+AGG | - | chr2_1:5466249-5466268 | Msa0190020:CDS | 35.0% | |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | + | chr2_1:5464856-5464875 | None:intergenic | 35.0% |
| ATAGCGAAGGATTTGAAGAA+TGG | + | chr2_1:5464895-5464914 | None:intergenic | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | + | chr2_1:5464908-5464927 | None:intergenic | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | + | chr2_1:5465158-5465177 | None:intergenic | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | - | chr2_1:5465249-5465268 | Msa0190020:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | + | chr2_1:5465428-5465447 | None:intergenic | 35.0% | |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | - | chr2_1:5465570-5465589 | Msa0190020:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | - | chr2_1:5465593-5465612 | Msa0190020:CDS | 35.0% |
| AAATTCCCACTAAACCCTAA+AGG | + | chr2_1:5465602-5465621 | None:intergenic | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | - | chr2_1:5465604-5465623 | Msa0190020:CDS | 35.0% |
| CAATGAAACAAAGCAGACAT+AGG | + | chr2_1:5465659-5465678 | None:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | - | chr2_1:5465668-5465687 | Msa0190020:CDS | 35.0% | |
| AAATGTTGAAGCTGGTAAGA+AGG | - | chr2_1:5466021-5466040 | Msa0190020:CDS | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | - | chr2_1:5466175-5466194 | Msa0190020:CDS | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | - | chr2_1:5466176-5466195 | Msa0190020:CDS | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | - | chr2_1:5466181-5466200 | Msa0190020:CDS | 35.0% | |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | - | chr2_1:5466194-5466213 | Msa0190020:CDS | 35.0% |
| TAAGAATTGGCAAGCTACTA+AGG | + | chr2_1:5466231-5466250 | None:intergenic | 35.0% | |
| TAATGTTGTTGCAGATGACA+AGG | - | chr2_1:5466249-5466268 | Msa0190020:CDS | 35.0% | |
| !! | TTGTCGTTGACTTGAACAGA+AGG | + | chr2_1:5465212-5465231 | None:intergenic | 40.0% |
| GTCAACCAATGAACCTGTTA+GGG | - | chr2_1:5465271-5465290 | Msa0190020:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | + | chr2_1:5465279-5465298 | None:intergenic | 40.0% | |
| AAACTGACGGTCAAACTTTC+TGG | - | chr2_1:5465393-5465412 | Msa0190020:CDS | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | - | chr2_1:5465436-5465455 | Msa0190020:CDS | 40.0% | |
| GTGCAATCAACGTAAACCTT+AGG | + | chr2_1:5465455-5465474 | None:intergenic | 40.0% | |
| ! | TTTACGTTGATTGCACACTC+CGG | - | chr2_1:5465459-5465478 | Msa0190020:CDS | 40.0% |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | - | chr2_1:5465501-5465520 | Msa0190020:CDS | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | - | chr2_1:5465502-5465521 | Msa0190020:CDS | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | - | chr2_1:5465569-5465588 | Msa0190020:CDS | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | - | chr2_1:5465584-5465603 | Msa0190020:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | - | chr2_1:5465585-5465604 | Msa0190020:CDS | 40.0% |
| GGATATCAATGGGTCTTCTT+CGG | - | chr2_1:5465625-5465644 | Msa0190020:CDS | 40.0% | |
| TCTTCTTCGCACCATTCATA+GGG | + | chr2_1:5465682-5465701 | None:intergenic | 40.0% | |
| TTCTTCTTCGCACCATTCAT+AGG | + | chr2_1:5465683-5465702 | None:intergenic | 40.0% | |
| ! | GATGATGATGATAGCAGTGA+TGG | - | chr2_1:5465776-5465795 | Msa0190020:CDS | 40.0% |
| ! | ATGATAGCAGTGATGGTGAT+TGG | - | chr2_1:5465783-5465802 | Msa0190020:CDS | 40.0% |
| TTGAAAGGAGACCAATTGAG+AGG | - | chr2_1:5465885-5465904 | Msa0190020:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | - | chr2_1:5465932-5465951 | Msa0190020:CDS | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | - | chr2_1:5465935-5465954 | Msa0190020:CDS | 40.0% | |
| !! | TGACAATGTGGTTGATGATG+AGG | - | chr2_1:5465964-5465983 | Msa0190020:CDS | 40.0% |
| TCAACATTTGACACCATTGC+AGG | + | chr2_1:5466010-5466029 | None:intergenic | 40.0% | |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | - | chr2_1:5466013-5466032 | Msa0190020:CDS | 40.0% |
| TGCTGGAAATTTGGGTAAGT+TGG | - | chr2_1:5466072-5466091 | Msa0190020:CDS | 40.0% | |
| ! | GGGTAAGTTGGATTTGAATG+TGG | - | chr2_1:5466084-5466103 | Msa0190020:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | - | chr2_1:5466193-5466212 | Msa0190020:CDS | 40.0% |
| !! | TTGTCGTTGACTTGAACAGA+AGG | + | chr2_1:5465212-5465231 | None:intergenic | 40.0% |
| GTCAACCAATGAACCTGTTA+GGG | - | chr2_1:5465271-5465290 | Msa0190020:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | + | chr2_1:5465279-5465298 | None:intergenic | 40.0% | |
| AAACTGACGGTCAAACTTTC+TGG | - | chr2_1:5465393-5465412 | Msa0190020:CDS | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | - | chr2_1:5465436-5465455 | Msa0190020:CDS | 40.0% | |
| GTGCAATCAACGTAAACCTT+AGG | + | chr2_1:5465455-5465474 | None:intergenic | 40.0% | |
| ! | TTTACGTTGATTGCACACTC+CGG | - | chr2_1:5465459-5465478 | Msa0190020:CDS | 40.0% |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | - | chr2_1:5465501-5465520 | Msa0190020:CDS | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | - | chr2_1:5465502-5465521 | Msa0190020:CDS | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | - | chr2_1:5465569-5465588 | Msa0190020:CDS | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | - | chr2_1:5465584-5465603 | Msa0190020:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | - | chr2_1:5465585-5465604 | Msa0190020:CDS | 40.0% |
| GGATATCAATGGGTCTTCTT+CGG | - | chr2_1:5465625-5465644 | Msa0190020:CDS | 40.0% | |
| TCTTCTTCGCACCATTCATA+GGG | + | chr2_1:5465682-5465701 | None:intergenic | 40.0% | |
| TTCTTCTTCGCACCATTCAT+AGG | + | chr2_1:5465683-5465702 | None:intergenic | 40.0% | |
| ! | GATGATGATGATAGCAGTGA+TGG | - | chr2_1:5465776-5465795 | Msa0190020:CDS | 40.0% |
| ! | ATGATAGCAGTGATGGTGAT+TGG | - | chr2_1:5465783-5465802 | Msa0190020:CDS | 40.0% |
| TTGAAAGGAGACCAATTGAG+AGG | - | chr2_1:5465885-5465904 | Msa0190020:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | - | chr2_1:5465932-5465951 | Msa0190020:CDS | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | - | chr2_1:5465935-5465954 | Msa0190020:CDS | 40.0% | |
| !! | TGACAATGTGGTTGATGATG+AGG | - | chr2_1:5465964-5465983 | Msa0190020:CDS | 40.0% |
| TCAACATTTGACACCATTGC+AGG | + | chr2_1:5466010-5466029 | None:intergenic | 40.0% | |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | - | chr2_1:5466013-5466032 | Msa0190020:CDS | 40.0% |
| TGCTGGAAATTTGGGTAAGT+TGG | - | chr2_1:5466072-5466091 | Msa0190020:CDS | 40.0% | |
| ! | GGGTAAGTTGGATTTGAATG+TGG | - | chr2_1:5466084-5466103 | Msa0190020:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | - | chr2_1:5466193-5466212 | Msa0190020:CDS | 40.0% |
| AGTTCAGTGGCTTCGAATCT+CGG | + | chr2_1:5464804-5464823 | None:intergenic | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | - | chr2_1:5464812-5464831 | Msa0190020:CDS | 45.0% | |
| AACCGCAAGAAGAAGTTCAG+TGG | + | chr2_1:5464817-5464836 | None:intergenic | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | - | chr2_1:5464834-5464853 | Msa0190020:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | + | chr2_1:5464940-5464959 | None:intergenic | 45.0% | |
| !! | TAAGCAAACGGGTTACGGTT+CGG | + | chr2_1:5464975-5464994 | None:intergenic | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | + | chr2_1:5464980-5464999 | None:intergenic | 45.0% |
| CATGAGCAGCATAAGCAAAC+GGG | + | chr2_1:5464986-5465005 | None:intergenic | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | + | chr2_1:5464987-5465006 | None:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | - | chr2_1:5465009-5465028 | Msa0190020:CDS | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | + | chr2_1:5465185-5465204 | None:intergenic | 45.0% | |
| ! | TTGACTTGAACAGAAGGAGG+AGG | + | chr2_1:5465206-5465225 | None:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | + | chr2_1:5465209-5465228 | None:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | + | chr2_1:5465262-5465281 | None:intergenic | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | + | chr2_1:5465268-5465287 | None:intergenic | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | + | chr2_1:5465269-5465288 | None:intergenic | 45.0% |
| GGTCAACCAATGAACCTGTT+AGG | - | chr2_1:5465270-5465289 | Msa0190020:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | - | chr2_1:5465283-5465302 | Msa0190020:CDS | 45.0% | |
| TCCTCATCAATCACCCTAAC+AGG | + | chr2_1:5465287-5465306 | None:intergenic | 45.0% | |
| !! | TCACCAGCATTGACATGACT+CGG | + | chr2_1:5465323-5465342 | None:intergenic | 45.0% |
| TCAATGCTGGTGAGTCTACT+GGG | - | chr2_1:5465330-5465349 | Msa0190020:CDS | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | + | chr2_1:5465390-5465409 | None:intergenic | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | - | chr2_1:5465397-5465416 | Msa0190020:CDS | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | + | chr2_1:5465423-5465442 | None:intergenic | 45.0% | |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | - | chr2_1:5465477-5465496 | Msa0190020:CDS | 45.0% |
| CCCTCTTACAATTCTGACAC+CGG | + | chr2_1:5465481-5465500 | None:intergenic | 45.0% | |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | - | chr2_1:5465478-5465497 | Msa0190020:CDS | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | - | chr2_1:5465479-5465498 | Msa0190020:CDS | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | - | chr2_1:5465493-5465512 | Msa0190020:CDS | 45.0% |
| TCAATGGGTCTTCTTCGGAA+TGG | - | chr2_1:5465630-5465649 | Msa0190020:CDS | 45.0% | |
| ATGGTGCGAAGAAGAATGCT+CGG | - | chr2_1:5465687-5465706 | Msa0190020:CDS | 45.0% | |
| ! | ATAGCAGTGATGGTGATTGG+CGG | - | chr2_1:5465786-5465805 | Msa0190020:CDS | 45.0% |
| AGAAGGAGGAAGAGAAGAAG+AGG | - | chr2_1:5465836-5465855 | Msa0190020:CDS | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | - | chr2_1:5465837-5465856 | Msa0190020:CDS | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | - | chr2_1:5465838-5465857 | Msa0190020:CDS | 45.0% | |
| AAGAGAAGAAGAGGGGCTTT+CGG | - | chr2_1:5465845-5465864 | Msa0190020:CDS | 45.0% | |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | - | chr2_1:5466063-5466082 | Msa0190020:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | - | chr2_1:5466064-5466083 | Msa0190020:CDS | 45.0% |
| GAATGTGGAGTTCAGCAATG+AGG | - | chr2_1:5466099-5466118 | Msa0190020:CDS | 45.0% | |
| AGTTCAGTGGCTTCGAATCT+CGG | + | chr2_1:5464804-5464823 | None:intergenic | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | - | chr2_1:5464812-5464831 | Msa0190020:CDS | 45.0% | |
| AACCGCAAGAAGAAGTTCAG+TGG | + | chr2_1:5464817-5464836 | None:intergenic | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | - | chr2_1:5464834-5464853 | Msa0190020:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | + | chr2_1:5464940-5464959 | None:intergenic | 45.0% | |
| !! | TAAGCAAACGGGTTACGGTT+CGG | + | chr2_1:5464975-5464994 | None:intergenic | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | + | chr2_1:5464980-5464999 | None:intergenic | 45.0% |
| CATGAGCAGCATAAGCAAAC+GGG | + | chr2_1:5464986-5465005 | None:intergenic | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | + | chr2_1:5464987-5465006 | None:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | - | chr2_1:5465009-5465028 | Msa0190020:CDS | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | + | chr2_1:5465185-5465204 | None:intergenic | 45.0% | |
| ! | TTGACTTGAACAGAAGGAGG+AGG | + | chr2_1:5465206-5465225 | None:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | + | chr2_1:5465209-5465228 | None:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | + | chr2_1:5465262-5465281 | None:intergenic | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | + | chr2_1:5465268-5465287 | None:intergenic | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | + | chr2_1:5465269-5465288 | None:intergenic | 45.0% |
| GGTCAACCAATGAACCTGTT+AGG | - | chr2_1:5465270-5465289 | Msa0190020:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | - | chr2_1:5465283-5465302 | Msa0190020:CDS | 45.0% | |
| TCCTCATCAATCACCCTAAC+AGG | + | chr2_1:5465287-5465306 | None:intergenic | 45.0% | |
| !! | TCACCAGCATTGACATGACT+CGG | + | chr2_1:5465323-5465342 | None:intergenic | 45.0% |
| TCAATGCTGGTGAGTCTACT+GGG | - | chr2_1:5465330-5465349 | Msa0190020:CDS | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | + | chr2_1:5465390-5465409 | None:intergenic | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | - | chr2_1:5465397-5465416 | Msa0190020:CDS | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | + | chr2_1:5465423-5465442 | None:intergenic | 45.0% | |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | - | chr2_1:5465477-5465496 | Msa0190020:CDS | 45.0% |
| CCCTCTTACAATTCTGACAC+CGG | + | chr2_1:5465481-5465500 | None:intergenic | 45.0% | |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | - | chr2_1:5465478-5465497 | Msa0190020:CDS | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | - | chr2_1:5465479-5465498 | Msa0190020:CDS | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | - | chr2_1:5465493-5465512 | Msa0190020:CDS | 45.0% |
| TCAATGGGTCTTCTTCGGAA+TGG | - | chr2_1:5465630-5465649 | Msa0190020:CDS | 45.0% | |
| ATGGTGCGAAGAAGAATGCT+CGG | - | chr2_1:5465687-5465706 | Msa0190020:CDS | 45.0% | |
| ! | ATAGCAGTGATGGTGATTGG+CGG | - | chr2_1:5465786-5465805 | Msa0190020:CDS | 45.0% |
| AGAAGGAGGAAGAGAAGAAG+AGG | - | chr2_1:5465836-5465855 | Msa0190020:CDS | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | - | chr2_1:5465837-5465856 | Msa0190020:CDS | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | - | chr2_1:5465838-5465857 | Msa0190020:CDS | 45.0% | |
| AAGAGAAGAAGAGGGGCTTT+CGG | - | chr2_1:5465845-5465864 | Msa0190020:CDS | 45.0% | |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | - | chr2_1:5466063-5466082 | Msa0190020:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | - | chr2_1:5466064-5466083 | Msa0190020:CDS | 45.0% |
| GAATGTGGAGTTCAGCAATG+AGG | - | chr2_1:5466099-5466118 | Msa0190020:CDS | 45.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | - | chr2_1:5464697-5464716 | Msa0190020:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | + | chr2_1:5464803-5464822 | None:intergenic | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | + | chr2_1:5464953-5464972 | None:intergenic | 50.0% | |
| !! | AAGCAAACGGGTTACGGTTC+GGG | + | chr2_1:5464974-5464993 | None:intergenic | 50.0% |
| ATAGGTTGCGGTTGTTGCTG+TGG | + | chr2_1:5465140-5465159 | None:intergenic | 50.0% | |
| AAATGCTGTGGTTGCGGTTG+TGG | + | chr2_1:5465179-5465198 | None:intergenic | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | + | chr2_1:5465191-5465210 | None:intergenic | 50.0% | |
| GTCAATGCTGGTGAGTCTAC+TGG | - | chr2_1:5465329-5465348 | Msa0190020:CDS | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | + | chr2_1:5465389-5465408 | None:intergenic | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | - | chr2_1:5465416-5465435 | Msa0190020:CDS | 50.0% | |
| TGCGAAGAAGAATGCTCGGA+AGG | - | chr2_1:5465691-5465710 | Msa0190020:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | - | chr2_1:5465692-5465711 | Msa0190020:CDS | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | - | chr2_1:5465693-5465712 | Msa0190020:CDS | 50.0% | |
| ! | TAGCAGTGATGGTGATTGGC+GGG | - | chr2_1:5465787-5465806 | Msa0190020:CDS | 50.0% |
| GGTACCAAAGGGAGTAGGAT+GGG | - | chr2_1:5465809-5465828 | Msa0190020:CDS | 50.0% | |
| !! | GTGGTGGTGGTGATGTTGAA+AGG | - | chr2_1:5465870-5465889 | Msa0190020:CDS | 50.0% |
| ACCAATTGAGAGGCCTAGGA+GGG | - | chr2_1:5465895-5465914 | Msa0190020:CDS | 50.0% | |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | + | chr2_1:5465911-5465930 | None:intergenic | 50.0% |
| AGGAGGGGGGTTCAACAAAA+TGG | - | chr2_1:5465911-5465930 | Msa0190020:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | - | chr2_1:5465938-5465957 | Msa0190020:CDS | 50.0% | |
| !! | GAGAATGACAATGGTGGTGG+TGG | - | chr2_1:5465941-5465960 | Msa0190020:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | - | chr2_1:5465994-5466013 | Msa0190020:CDS | 50.0% |
| TGAAGCTGGTAAGAAGGCTG+TGG | - | chr2_1:5466027-5466046 | Msa0190020:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | - | chr2_1:5466102-5466121 | Msa0190020:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | - | chr2_1:5466121-5466140 | Msa0190020:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | - | chr2_1:5466132-5466151 | Msa0190020:CDS | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | - | chr2_1:5466133-5466152 | Msa0190020:CDS | 50.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | - | chr2_1:5464697-5464716 | Msa0190020:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | + | chr2_1:5464803-5464822 | None:intergenic | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | + | chr2_1:5464953-5464972 | None:intergenic | 50.0% | |
| !! | AAGCAAACGGGTTACGGTTC+GGG | + | chr2_1:5464974-5464993 | None:intergenic | 50.0% |
| ATAGGTTGCGGTTGTTGCTG+TGG | + | chr2_1:5465140-5465159 | None:intergenic | 50.0% | |
| AAATGCTGTGGTTGCGGTTG+TGG | + | chr2_1:5465179-5465198 | None:intergenic | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | + | chr2_1:5465191-5465210 | None:intergenic | 50.0% | |
| GTCAATGCTGGTGAGTCTAC+TGG | - | chr2_1:5465329-5465348 | Msa0190020:CDS | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | + | chr2_1:5465389-5465408 | None:intergenic | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | - | chr2_1:5465416-5465435 | Msa0190020:CDS | 50.0% | |
| TGCGAAGAAGAATGCTCGGA+AGG | - | chr2_1:5465691-5465710 | Msa0190020:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | - | chr2_1:5465692-5465711 | Msa0190020:CDS | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | - | chr2_1:5465693-5465712 | Msa0190020:CDS | 50.0% | |
| ! | TAGCAGTGATGGTGATTGGC+GGG | - | chr2_1:5465787-5465806 | Msa0190020:CDS | 50.0% |
| GGTACCAAAGGGAGTAGGAT+GGG | - | chr2_1:5465809-5465828 | Msa0190020:CDS | 50.0% | |
| !! | GTGGTGGTGGTGATGTTGAA+AGG | - | chr2_1:5465870-5465889 | Msa0190020:CDS | 50.0% |
| ACCAATTGAGAGGCCTAGGA+GGG | - | chr2_1:5465895-5465914 | Msa0190020:CDS | 50.0% | |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | + | chr2_1:5465911-5465930 | None:intergenic | 50.0% |
| AGGAGGGGGGTTCAACAAAA+TGG | - | chr2_1:5465911-5465930 | Msa0190020:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | - | chr2_1:5465938-5465957 | Msa0190020:CDS | 50.0% | |
| !! | GAGAATGACAATGGTGGTGG+TGG | - | chr2_1:5465941-5465960 | Msa0190020:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | - | chr2_1:5465994-5466013 | Msa0190020:CDS | 50.0% |
| TGAAGCTGGTAAGAAGGCTG+TGG | - | chr2_1:5466027-5466046 | Msa0190020:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | - | chr2_1:5466102-5466121 | Msa0190020:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | - | chr2_1:5466121-5466140 | Msa0190020:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | - | chr2_1:5466132-5466151 | Msa0190020:CDS | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | - | chr2_1:5466133-5466152 | Msa0190020:CDS | 50.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | + | chr2_1:5464775-5464794 | None:intergenic | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | + | chr2_1:5464781-5464800 | None:intergenic | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | + | chr2_1:5464799-5464818 | None:intergenic | 55.0% | |
| TGTTGCTGTGGATGTGGTGG+TGG | + | chr2_1:5465128-5465147 | None:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | + | chr2_1:5465131-5465150 | None:intergenic | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | + | chr2_1:5465134-5465153 | None:intergenic | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | + | chr2_1:5465170-5465189 | None:intergenic | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | - | chr2_1:5465380-5465399 | Msa0190020:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | - | chr2_1:5465539-5465558 | Msa0190020:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | - | chr2_1:5465736-5465755 | Msa0190020:CDS | 55.0% | |
| ! | AGCAGTGATGGTGATTGGCG+GGG | - | chr2_1:5465788-5465807 | Msa0190020:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | - | chr2_1:5465798-5465817 | Msa0190020:CDS | 55.0% |
| GGGTACCAAAGGGAGTAGGA+TGG | - | chr2_1:5465808-5465827 | Msa0190020:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | + | chr2_1:5465816-5465835 | None:intergenic | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | - | chr2_1:5465813-5465832 | Msa0190020:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | - | chr2_1:5465819-5465838 | Msa0190020:CDS | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | - | chr2_1:5465822-5465841 | Msa0190020:CDS | 55.0% | |
| AGAAGAAGAGGGGCTTTCGG+TGG | - | chr2_1:5465848-5465867 | Msa0190020:CDS | 55.0% | |
| GGAGACCAATTGAGAGGCCT+AGG | - | chr2_1:5465891-5465910 | Msa0190020:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | - | chr2_1:5465894-5465913 | Msa0190020:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | - | chr2_1:5465896-5465915 | Msa0190020:CDS | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | - | chr2_1:5465897-5465916 | Msa0190020:CDS | 55.0% | |
| AATTGAGAGGCCTAGGAGGG+GGG | - | chr2_1:5465898-5465917 | Msa0190020:CDS | 55.0% | |
| !! | TGGTGGTGGTGGTGACAATG+TGG | - | chr2_1:5465952-5465971 | Msa0190020:CDS | 55.0% |
| AGCTGGTAAGAAGGCTGTGG+TGG | - | chr2_1:5466030-5466049 | Msa0190020:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | - | chr2_1:5466031-5466050 | Msa0190020:CDS | 55.0% | |
| !! | CTGTGGTGGGTGGTTTGAGA+AGG | - | chr2_1:5466044-5466063 | Msa0190020:CDS | 55.0% |
| GTGGGTGGTTTGAGAAGGAG+AGG | - | chr2_1:5466049-5466068 | Msa0190020:CDS | 55.0% | |
| ! | GGTTTGAGAAGGAGAGGTGC+TGG | - | chr2_1:5466055-5466074 | Msa0190020:CDS | 55.0% |
| CTGCTAGTGGAGTGAGACAG+GGG | - | chr2_1:5466134-5466153 | Msa0190020:CDS | 55.0% | |
| GTGAGACAGGGGAACGTGAA+CGG | - | chr2_1:5466145-5466164 | Msa0190020:CDS | 55.0% | |
| TGAGACAGGGGAACGTGAAC+GGG | - | chr2_1:5466146-5466165 | Msa0190020:CDS | 55.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | + | chr2_1:5464775-5464794 | None:intergenic | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | + | chr2_1:5464781-5464800 | None:intergenic | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | + | chr2_1:5464799-5464818 | None:intergenic | 55.0% | |
| TGTTGCTGTGGATGTGGTGG+TGG | + | chr2_1:5465128-5465147 | None:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | + | chr2_1:5465131-5465150 | None:intergenic | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | + | chr2_1:5465134-5465153 | None:intergenic | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | + | chr2_1:5465170-5465189 | None:intergenic | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | - | chr2_1:5465380-5465399 | Msa0190020:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | - | chr2_1:5465539-5465558 | Msa0190020:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | - | chr2_1:5465736-5465755 | Msa0190020:CDS | 55.0% | |
| ! | AGCAGTGATGGTGATTGGCG+GGG | - | chr2_1:5465788-5465807 | Msa0190020:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | - | chr2_1:5465798-5465817 | Msa0190020:CDS | 55.0% |
| GGGTACCAAAGGGAGTAGGA+TGG | - | chr2_1:5465808-5465827 | Msa0190020:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | + | chr2_1:5465816-5465835 | None:intergenic | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | - | chr2_1:5465813-5465832 | Msa0190020:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | - | chr2_1:5465819-5465838 | Msa0190020:CDS | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | - | chr2_1:5465822-5465841 | Msa0190020:CDS | 55.0% | |
| AGAAGAAGAGGGGCTTTCGG+TGG | - | chr2_1:5465848-5465867 | Msa0190020:CDS | 55.0% | |
| GGAGACCAATTGAGAGGCCT+AGG | - | chr2_1:5465891-5465910 | Msa0190020:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | - | chr2_1:5465894-5465913 | Msa0190020:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | - | chr2_1:5465896-5465915 | Msa0190020:CDS | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | - | chr2_1:5465897-5465916 | Msa0190020:CDS | 55.0% | |
| AATTGAGAGGCCTAGGAGGG+GGG | - | chr2_1:5465898-5465917 | Msa0190020:CDS | 55.0% | |
| !! | TGGTGGTGGTGGTGACAATG+TGG | - | chr2_1:5465952-5465971 | Msa0190020:CDS | 55.0% |
| AGCTGGTAAGAAGGCTGTGG+TGG | - | chr2_1:5466030-5466049 | Msa0190020:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | - | chr2_1:5466031-5466050 | Msa0190020:CDS | 55.0% | |
| !! | CTGTGGTGGGTGGTTTGAGA+AGG | - | chr2_1:5466044-5466063 | Msa0190020:CDS | 55.0% |
| GTGGGTGGTTTGAGAAGGAG+AGG | - | chr2_1:5466049-5466068 | Msa0190020:CDS | 55.0% | |
| ! | GGTTTGAGAAGGAGAGGTGC+TGG | - | chr2_1:5466055-5466074 | Msa0190020:CDS | 55.0% |
| CTGCTAGTGGAGTGAGACAG+GGG | - | chr2_1:5466134-5466153 | Msa0190020:CDS | 55.0% | |
| GTGAGACAGGGGAACGTGAA+CGG | - | chr2_1:5466145-5466164 | Msa0190020:CDS | 55.0% | |
| TGAGACAGGGGAACGTGAAC+GGG | - | chr2_1:5466146-5466165 | Msa0190020:CDS | 55.0% | |
| ACGCGCGCTGAGGAGTTTGT+TGG | + | chr2_1:5464733-5464752 | None:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | - | chr2_1:5464741-5464760 | Msa0190020:CDS | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | + | chr2_1:5464769-5464788 | None:intergenic | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | + | chr2_1:5464770-5464789 | None:intergenic | 60.0% | |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | + | chr2_1:5464965-5464984 | None:intergenic | 60.0% |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | + | chr2_1:5464968-5464987 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTTGTGGTTG+CGG | + | chr2_1:5465110-5465129 | None:intergenic | 60.0% |
| !! | TGTGGTGGTGGTGGTGGTTG+TGG | + | chr2_1:5465116-5465135 | None:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | + | chr2_1:5465122-5465141 | None:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | + | chr2_1:5465125-5465144 | None:intergenic | 60.0% |
| TGCTGTGGTTGCGGTTGTGG+TGG | + | chr2_1:5465176-5465195 | None:intergenic | 60.0% | |
| GGGCCGAGTCATGTCAATGC+TGG | - | chr2_1:5465317-5465336 | Msa0190020:CDS | 60.0% | |
| CTGGTGAGTCTACTGGGCCT+AGG | - | chr2_1:5465336-5465355 | Msa0190020:CDS | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | - | chr2_1:5465511-5465530 | Msa0190020:CDS | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | + | chr2_1:5465530-5465549 | None:intergenic | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | + | chr2_1:5465533-5465552 | None:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | - | chr2_1:5465530-5465549 | Msa0190020:CDS | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | - | chr2_1:5465538-5465557 | Msa0190020:CDS | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | - | chr2_1:5465544-5465563 | Msa0190020:CDS | 60.0% | |
| ! | GGTGATTGGCGGGGTACCAA+AGG | - | chr2_1:5465797-5465816 | Msa0190020:CDS | 60.0% |
| AGAAGAGGGGCTTTCGGTGG+TGG | - | chr2_1:5465851-5465870 | Msa0190020:CDS | 60.0% | |
| CCCCTCCTAGGCCTCTCAAT+TGG | + | chr2_1:5465899-5465918 | None:intergenic | 60.0% | |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | - | chr2_1:5466034-5466053 | Msa0190020:CDS | 60.0% |
| AGGGGAACGTGAACGGGACA+GGG | - | chr2_1:5466152-5466171 | Msa0190020:CDS | 60.0% | |
| ACGCGCGCTGAGGAGTTTGT+TGG | + | chr2_1:5464733-5464752 | None:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | - | chr2_1:5464741-5464760 | Msa0190020:CDS | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | + | chr2_1:5464769-5464788 | None:intergenic | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | + | chr2_1:5464770-5464789 | None:intergenic | 60.0% | |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | + | chr2_1:5464965-5464984 | None:intergenic | 60.0% |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | + | chr2_1:5464968-5464987 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTTGTGGTTG+CGG | + | chr2_1:5465110-5465129 | None:intergenic | 60.0% |
| !! | TGTGGTGGTGGTGGTGGTTG+TGG | + | chr2_1:5465116-5465135 | None:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | + | chr2_1:5465122-5465141 | None:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | + | chr2_1:5465125-5465144 | None:intergenic | 60.0% |
| TGCTGTGGTTGCGGTTGTGG+TGG | + | chr2_1:5465176-5465195 | None:intergenic | 60.0% | |
| GGGCCGAGTCATGTCAATGC+TGG | - | chr2_1:5465317-5465336 | Msa0190020:CDS | 60.0% | |
| CTGGTGAGTCTACTGGGCCT+AGG | - | chr2_1:5465336-5465355 | Msa0190020:CDS | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | - | chr2_1:5465511-5465530 | Msa0190020:CDS | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | + | chr2_1:5465530-5465549 | None:intergenic | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | + | chr2_1:5465533-5465552 | None:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | - | chr2_1:5465530-5465549 | Msa0190020:CDS | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | - | chr2_1:5465538-5465557 | Msa0190020:CDS | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | - | chr2_1:5465544-5465563 | Msa0190020:CDS | 60.0% | |
| ! | GGTGATTGGCGGGGTACCAA+AGG | - | chr2_1:5465797-5465816 | Msa0190020:CDS | 60.0% |
| AGAAGAGGGGCTTTCGGTGG+TGG | - | chr2_1:5465851-5465870 | Msa0190020:CDS | 60.0% | |
| CCCCTCCTAGGCCTCTCAAT+TGG | + | chr2_1:5465899-5465918 | None:intergenic | 60.0% | |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | - | chr2_1:5466034-5466053 | Msa0190020:CDS | 60.0% |
| AGGGGAACGTGAACGGGACA+GGG | - | chr2_1:5466152-5466171 | Msa0190020:CDS | 60.0% | |
| CGTGTAAGTCACGCGCGCTG+AGG | + | chr2_1:5464743-5464762 | None:intergenic | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | - | chr2_1:5464763-5464782 | Msa0190020:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | - | chr2_1:5464764-5464783 | Msa0190020:CDS | 65.0% | |
| ! | GGTGGTGGTTGTGGTTGCGG+CGG | + | chr2_1:5465107-5465126 | None:intergenic | 65.0% |
| AGTCTACTGGGCCTAGGCCC+AGG | - | chr2_1:5465342-5465361 | Msa0190020:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | + | chr2_1:5465368-5465387 | None:intergenic | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | - | chr2_1:5465368-5465387 | Msa0190020:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | - | chr2_1:5465548-5465567 | Msa0190020:CDS | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | - | chr2_1:5465551-5465570 | Msa0190020:CDS | 65.0% | |
| AAGCTCCGCGAACGCTGCAC+AGG | + | chr2_1:5465744-5465763 | None:intergenic | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | - | chr2_1:5465804-5465823 | Msa0190020:CDS | 65.0% |
| ! | AGAGGGGCTTTCGGTGGTGG+TGG | - | chr2_1:5465854-5465873 | Msa0190020:CDS | 65.0% |
| CAGGGGAACGTGAACGGGAC+AGG | - | chr2_1:5466151-5466170 | Msa0190020:CDS | 65.0% | |
| GAACGGGACAGGGAATGCCG+AGG | - | chr2_1:5466162-5466181 | Msa0190020:CDS | 65.0% | |
| CGTGTAAGTCACGCGCGCTG+AGG | + | chr2_1:5464743-5464762 | None:intergenic | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | - | chr2_1:5464763-5464782 | Msa0190020:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | - | chr2_1:5464764-5464783 | Msa0190020:CDS | 65.0% | |
| ! | GGTGGTGGTTGTGGTTGCGG+CGG | + | chr2_1:5465107-5465126 | None:intergenic | 65.0% |
| AGTCTACTGGGCCTAGGCCC+AGG | - | chr2_1:5465342-5465361 | Msa0190020:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | + | chr2_1:5465368-5465387 | None:intergenic | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | - | chr2_1:5465368-5465387 | Msa0190020:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | - | chr2_1:5465548-5465567 | Msa0190020:CDS | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | - | chr2_1:5465551-5465570 | Msa0190020:CDS | 65.0% | |
| AAGCTCCGCGAACGCTGCAC+AGG | + | chr2_1:5465744-5465763 | None:intergenic | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | - | chr2_1:5465804-5465823 | Msa0190020:CDS | 65.0% |
| ! | AGAGGGGCTTTCGGTGGTGG+TGG | - | chr2_1:5465854-5465873 | Msa0190020:CDS | 65.0% |
| CAGGGGAACGTGAACGGGAC+AGG | - | chr2_1:5466151-5466170 | Msa0190020:CDS | 65.0% | |
| GAACGGGACAGGGAATGCCG+AGG | - | chr2_1:5466162-5466181 | Msa0190020:CDS | 65.0% | |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | + | chr2_1:5465098-5465117 | None:intergenic | 70.0% |
| GGTTGTGGTTGCGGCGGTGG+TGG | + | chr2_1:5465101-5465120 | None:intergenic | 70.0% | |
| GGTGGTTGTGGTTGCGGCGG+TGG | + | chr2_1:5465104-5465123 | None:intergenic | 70.0% | |
| TACTGGGCCTAGGCCCAGGC+CGG | - | chr2_1:5465346-5465365 | Msa0190020:CDS | 70.0% | |
| GGTAGTACGGGCACCACCGG+AGG | - | chr2_1:5465514-5465533 | Msa0190020:CDS | 70.0% | |
| !! | GGGGCTTTCGGTGGTGGTGG+TGG | - | chr2_1:5465857-5465876 | Msa0190020:CDS | 70.0% |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | + | chr2_1:5465098-5465117 | None:intergenic | 70.0% |
| GGTTGTGGTTGCGGCGGTGG+TGG | + | chr2_1:5465101-5465120 | None:intergenic | 70.0% | |
| GGTGGTTGTGGTTGCGGCGG+TGG | + | chr2_1:5465104-5465123 | None:intergenic | 70.0% | |
| TACTGGGCCTAGGCCCAGGC+CGG | - | chr2_1:5465346-5465365 | Msa0190020:CDS | 70.0% | |
| GGTAGTACGGGCACCACCGG+AGG | - | chr2_1:5465514-5465533 | Msa0190020:CDS | 70.0% | |
| !! | GGGGCTTTCGGTGGTGGTGG+TGG | - | chr2_1:5465857-5465876 | Msa0190020:CDS | 70.0% |
| GCAGACTCCGGCCTGGGCCT+AGG | + | chr2_1:5465356-5465375 | None:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | - | chr2_1:5465356-5465375 | Msa0190020:CDS | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | - | chr2_1:5465357-5465376 | Msa0190020:CDS | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | - | chr2_1:5465358-5465377 | Msa0190020:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | + | chr2_1:5465362-5465381 | None:intergenic | 75.0% | |
| AGCCCCAGCAGACTCCGGCC+TGG | + | chr2_1:5465363-5465382 | None:intergenic | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | - | chr2_1:5465521-5465540 | Msa0190020:CDS | 75.0% | |
| GCAGACTCCGGCCTGGGCCT+AGG | + | chr2_1:5465356-5465375 | None:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | - | chr2_1:5465356-5465375 | Msa0190020:CDS | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | - | chr2_1:5465357-5465376 | Msa0190020:CDS | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | - | chr2_1:5465358-5465377 | Msa0190020:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | + | chr2_1:5465362-5465381 | None:intergenic | 75.0% | |
| AGCCCCAGCAGACTCCGGCC+TGG | + | chr2_1:5465363-5465382 | None:intergenic | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | - | chr2_1:5465521-5465540 | Msa0190020:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 5464684 | 5466285 | 5464684 | ID=Msa0190020;Name=Msa0190020 |
| chr2_1 | mRNA | 5464684 | 5466285 | 5464684 | ID=Msa0190020-mRNA-1;Parent=Msa0190020;Name=Msa0190020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|-1|0|1|-1|1|1|0|533 |
| chr2_1 | exon | 5464684 | 5466285 | 5464684 | ID=Msa0190020-mRNA-1:exon:2447;Parent=Msa0190020-mRNA-1 |
| chr2_1 | CDS | 5464684 | 5466285 | 5464684 | ID=Msa0190020-mRNA-1:cds;Parent=Msa0190020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
