Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430920 | AES63513.2 | 76.075 | 535 | 56 | 6 | 1 | 464 | 1 | 534 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430920 | G7IPP0 | 76.075 | 535 | 56 | 6 | 1 | 464 | 1 | 534 | 0.0 | 652 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090400 | Msa1430920 | 0.817222 | 3.687790e-52 | -8.615850e-47 |
| Msa0137880 | Msa1430920 | 0.805430 | 1.340110e-49 | -8.615850e-47 |
| Msa0190020 | Msa1430920 | 0.877909 | 4.305612e-69 | -8.615850e-47 |
| Msa0307770 | Msa1430920 | 0.923687 | 1.910896e-89 | -8.615850e-47 |
| Msa1223470 | Msa1430920 | 0.808999 | 2.349710e-50 | -8.615850e-47 |
| Msa0520890 | Msa1430920 | 0.807163 | 5.781506e-50 | -8.615850e-47 |
| Msa0907910 | Msa1430920 | 0.934553 | 3.381135e-96 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430920 | MtrunA17_Chr2g0279591 | 76.075 | 535 | 56 | 6 | 1 | 464 | 1 | 534 | 0.0 | 652 |
| Msa1430920 | MtrunA17_Chr4g0049941 | 47.170 | 265 | 104 | 9 | 208 | 464 | 253 | 489 | 9.02e-51 | 179 |
| Msa1430920 | MtrunA17_Chr4g0049941 | 76.415 | 106 | 23 | 2 | 1 | 104 | 1 | 106 | 1.50e-45 | 165 |
| Msa1430920 | MtrunA17_Chr5g0427371 | 48.000 | 100 | 52 | 0 | 1 | 100 | 1 | 100 | 1.07e-22 | 99.0 |
| Msa1430920 | MtrunA17_Chr3g0132971 | 40.952 | 105 | 58 | 2 | 4 | 104 | 3 | 107 | 6.84e-17 | 79.7 |
| Msa1430920 | MtrunA17_Chr5g0447431 | 34.737 | 95 | 61 | 1 | 4 | 98 | 3 | 96 | 2.06e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430920 | AT5G64360.5 | 36.364 | 264 | 129 | 8 | 208 | 462 | 229 | 462 | 1.58e-28 | 117 |
| Msa1430920 | AT5G64360.5 | 53.191 | 94 | 41 | 2 | 8 | 98 | 17 | 110 | 8.67e-23 | 101 |
| Msa1430920 | AT5G64360.7 | 36.364 | 264 | 129 | 8 | 208 | 462 | 229 | 462 | 1.58e-28 | 117 |
| Msa1430920 | AT5G64360.7 | 53.191 | 94 | 41 | 2 | 8 | 98 | 17 | 110 | 8.67e-23 | 101 |
| Msa1430920 | AT5G64360.6 | 36.364 | 264 | 129 | 8 | 208 | 462 | 229 | 462 | 1.58e-28 | 117 |
| Msa1430920 | AT5G64360.6 | 53.191 | 94 | 41 | 2 | 8 | 98 | 17 | 110 | 8.67e-23 | 101 |
| Msa1430920 | AT5G64360.3 | 36.364 | 264 | 129 | 8 | 208 | 462 | 229 | 462 | 1.58e-28 | 117 |
| Msa1430920 | AT5G64360.3 | 53.191 | 94 | 41 | 2 | 8 | 98 | 17 | 110 | 8.67e-23 | 101 |
| Msa1430920 | AT5G64360.2 | 36.364 | 264 | 129 | 8 | 208 | 462 | 229 | 462 | 1.58e-28 | 117 |
| Msa1430920 | AT5G64360.2 | 53.191 | 94 | 41 | 2 | 8 | 98 | 17 | 110 | 8.67e-23 | 101 |
| Msa1430920 | AT5G64360.4 | 36.364 | 264 | 129 | 8 | 208 | 462 | 229 | 462 | 1.58e-28 | 117 |
| Msa1430920 | AT5G64360.4 | 53.191 | 94 | 41 | 2 | 8 | 98 | 17 | 110 | 8.67e-23 | 101 |
| Msa1430920 | AT5G64360.1 | 53.191 | 94 | 41 | 2 | 8 | 98 | 17 | 110 | 5.58e-23 | 101 |
| Msa1430920 | AT5G64360.1 | 63.636 | 77 | 24 | 2 | 390 | 462 | 344 | 420 | 3.70e-19 | 89.7 |
| Msa1430920 | AT5G09540.1 | 52.577 | 97 | 43 | 2 | 5 | 98 | 10 | 106 | 7.59e-23 | 98.6 |
| Msa1430920 | AT2G01710.1 | 52.525 | 99 | 42 | 2 | 5 | 98 | 7 | 105 | 9.07e-21 | 93.2 |
| Msa1430920 | AT2G01710.2 | 52.525 | 99 | 42 | 2 | 5 | 98 | 51 | 149 | 2.85e-20 | 92.4 |
| Msa1430920 | AT1G62970.1 | 48.958 | 96 | 44 | 2 | 8 | 98 | 17 | 112 | 1.35e-19 | 92.4 |
Find 165 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAGAGGTGCTGGAAATT+TGG | 0.194700 | tig0026773:+29831 | Msa1430920:CDS |
| AGGCCCAGGCCGGAGTCTGC+TGG | 0.259644 | tig0026773:+29125 | Msa1430920:CDS |
| AAGAGAAGAAGAGGGGCTTT+TGG | 0.287237 | tig0026773:+29613 | Msa1430920:CDS |
| CATTGGTTGACCTAGGGTTT+TGG | 0.291648 | tig0026773:-29028 | Msa1430920:intergenic |
| AGGAGAGGTGCTGGAAATTT+GGG | 0.299385 | tig0026773:+29832 | Msa1430920:CDS |
| TCATGATCATAATAACTAAA+AGG | 0.301913 | tig0026773:-29484 | Msa1430920:intergenic |
| TGCTGGAAATTTGGGTAAGT+TGG | 0.320594 | tig0026773:+29840 | Msa1430920:CDS |
| AAGCAAACGGGTTACGGTTC+GGG | 0.334461 | tig0026773:-28738 | Msa1430920:intergenic |
| TTCTTCTTCGCGCCATTCAT+AGG | 0.340125 | tig0026773:-29448 | Msa1430920:intergenic |
| GCAGACTCCGGCCTGGGCCT+AGG | 0.344007 | tig0026773:-29122 | Msa1430920:intergenic |
| CGCCCGTTCCTTCGCCATTC+GGG | 0.353379 | tig0026773:+28531 | Msa1430920:CDS |
| TGGTGTTGTGGTTGCGGCGG+TGG | 0.354385 | tig0026773:-28868 | Msa1430920:intergenic |
| GGTCAACCAATGAACCTGTT+AGG | 0.359838 | tig0026773:+29039 | Msa1430920:CDS |
| GCGCCCGTTCCTTCGCCATT+CGG | 0.370967 | tig0026773:+28530 | Msa1430920:CDS |
| AGCCCCAGCAGACTCCGGCC+TGG | 0.373358 | tig0026773:-29129 | Msa1430920:intergenic |
| ACCTCATCAATCACCCTAAC+AGG | 0.377189 | tig0026773:-29053 | Msa1430920:intergenic |
| AATCACCCTAACAGGTTCAT+TGG | 0.383228 | tig0026773:-29045 | Msa1430920:intergenic |
| TGCTGTGGATGTGGTGGTGG+TGG | 0.386613 | tig0026773:-28891 | Msa1430920:intergenic |
| GGCCCAGGCCGGAGTCTGCT+GGG | 0.387098 | tig0026773:+29126 | Msa1430920:CDS |
| GCCCCAGCAGACTCCGGCCT+GGG | 0.390143 | tig0026773:-29128 | Msa1430920:intergenic |
| TGTTGTGGTTGCGGCGGTGG+TGG | 0.402372 | tig0026773:-28865 | Msa1430920:intergenic |
| TGCCCGAATGGCGAAGGAAC+GGG | 0.412075 | tig0026773:-28533 | Msa1430920:intergenic |
| TGGTGGTGGTGTTGTGGTTG+CGG | 0.412810 | tig0026773:-28874 | Msa1430920:intergenic |
| TTCTGCTAGTGGAGTGAGAC+AGG | 0.412907 | tig0026773:+29900 | Msa1430920:CDS |
| TCAACATTTGACACCATTGC+AGG | 0.413719 | tig0026773:-29775 | Msa1430920:intergenic |
| TGTGGATGTGGTGGTGGTGG+TGG | 0.414191 | tig0026773:-28888 | Msa1430920:intergenic |
| CAGGGGAACGTAAACGGGAC+AGG | 0.419825 | tig0026773:+29919 | Msa1430920:CDS |
| AGGATAATATTGAAGGGATT+GGG | 0.422331 | tig0026773:+29950 | Msa1430920:CDS |
| AAATGCTGTGGTTGCGGTTG+TGG | 0.425742 | tig0026773:-28945 | Msa1430920:intergenic |
| CCTACCCATCCTACTCCCTT+TGG | 0.432200 | tig0026773:-29581 | Msa1430920:intergenic |
| GGATATCAATGGGTCTTCTT+CGG | 0.433579 | tig0026773:+29393 | Msa1430920:CDS |
| TTCTTTGATTCTAGCTTCAC+CGG | 0.434187 | tig0026773:-28620 | Msa1430920:intergenic |
| GTGAGACAGGGGAACGTAAA+CGG | 0.434508 | tig0026773:+29913 | Msa1430920:CDS |
| TGTGGTTGCGGCGGTGGTGG+TGG | 0.435442 | tig0026773:-28862 | Msa1430920:intergenic |
| TCTGCAACAACGTTAAGAAT+TGG | 0.437792 | tig0026773:-30009 | Msa1430920:intergenic |
| AGTTCAGTGGCTTCGAATCT+CGG | 0.439160 | tig0026773:-28568 | Msa1430920:intergenic |
| GGAGACCAATTGAGAGGCCT+AGG | 0.439545 | tig0026773:+29659 | Msa1430920:CDS |
| GAGGATAATATTGAAGGGAT+TGG | 0.440885 | tig0026773:+29949 | Msa1430920:CDS |
| GTTCAGTGGCTTCGAATCTC+GGG | 0.442981 | tig0026773:-28567 | Msa1430920:intergenic |
| CGGGCACCACCGGAGGTGAC+TGG | 0.443466 | tig0026773:+29289 | Msa1430920:CDS |
| GAAGGAGGAAGAGAAGAAGA+GGG | 0.444043 | tig0026773:+29605 | Msa1430920:CDS |
| AGTCTACTGGGCCTAGGCCC+AGG | 0.445027 | tig0026773:+29111 | Msa1430920:CDS |
| TAAGAATTGGCAAGCTACTA+AGG | 0.450903 | tig0026773:-29996 | Msa1430920:intergenic |
| GTAGGATGGGTAGGAGAAGG+AGG | 0.454601 | tig0026773:+29590 | Msa1430920:CDS |
| TGAGACAGGGGAACGTAAAC+GGG | 0.455156 | tig0026773:+29914 | Msa1430920:CDS |
| CCCCTCCTAGGCCTCTCAAT+TGG | 0.455567 | tig0026773:-29664 | Msa1430920:intergenic |
| TTGTTTCATTGCCCTATGAA+TGG | 0.458076 | tig0026773:+29436 | Msa1430920:CDS |
| ACGGGTTACGGTTCGGGTCA+AGG | 0.470734 | tig0026773:-28732 | Msa1430920:intergenic |
| GTCAATGCTGATGAGTCTAC+TGG | 0.470766 | tig0026773:+29098 | Msa1430920:CDS |
| GGAGTAGGATGGGTAGGAGA+AGG | 0.475139 | tig0026773:+29587 | Msa1430920:CDS |
| AGTTTGACCGTCAGTTTCAC+CGG | 0.476193 | tig0026773:-29156 | Msa1430920:intergenic |
| GGTGATTGGCGGGGTACCAA+AGG | 0.477928 | tig0026773:+29565 | Msa1430920:CDS |
| GGTGGTAAAGGAAATTGAAT+AGG | 0.479480 | tig0026773:-28924 | Msa1430920:intergenic |
| TGATACCTGTGCAGCGTTCG+CGG | 0.484855 | tig0026773:+29504 | Msa1430920:CDS |
| CCGTCTTCTCCAGTCACCTC+CGG | 0.487601 | tig0026773:-29298 | Msa1430920:intergenic |
| ACGCGCGCTGAGGAGTTTGT+TGG | 0.488952 | tig0026773:-28497 | Msa1430920:intergenic |
| GAGTCTGCTGGGGCTAAGCC+CGG | 0.494733 | tig0026773:+29137 | Msa1430920:CDS |
| TGTTGCTGTGGATGTGGTGG+TGG | 0.498810 | tig0026773:-28894 | Msa1430920:intergenic |
| AGAAGGAGGAAGAGAAGAAG+AGG | 0.499015 | tig0026773:+29604 | Msa1430920:CDS |
| CTGATGAGTCTACTGGGCCT+AGG | 0.503024 | tig0026773:+29105 | Msa1430920:CDS |
| CAATTGAGAGGCCTAGGAGG+GGG | 0.504720 | tig0026773:+29665 | Msa1430920:CDS |
| CGCGAAGAAGAATGCTCGGA+AGG | 0.506788 | tig0026773:+29459 | Msa1430920:CDS |
| GGTTCGAGAAGGAGAGGTGC+TGG | 0.513952 | tig0026773:+29823 | Msa1430920:CDS |
| TCTTCTTCGCGCCATTCATA+GGG | 0.514484 | tig0026773:-29447 | Msa1430920:intergenic |
| TACTGGGCCTAGGCCCAGGC+CGG | 0.518600 | tig0026773:+29115 | Msa1430920:CDS |
| GACGGTGACGAGGGAGAGGT+TGG | 0.518695 | tig0026773:+29316 | Msa1430920:CDS |
| CAGGTTCATTGGTTGACCTA+GGG | 0.520104 | tig0026773:-29034 | Msa1430920:intergenic |
| TGCGGTTGTTGCTGTGGATG+TGG | 0.520536 | tig0026773:-28900 | Msa1430920:intergenic |
| AAGCTCCGCGAACGCTGCAC+AGG | 0.521459 | tig0026773:-29509 | Msa1430920:intergenic |
| GTCGGATTCTTGTGCCCGAA+TGG | 0.522206 | tig0026773:-28545 | Msa1430920:intergenic |
| GTCAACCAATGAACCTGTTA+GGG | 0.524013 | tig0026773:+29040 | Msa1430920:CDS |
| GGCTTAGCCCCAGCAGACTC+CGG | 0.527248 | tig0026773:-29134 | Msa1430920:intergenic |
| ATGATAGCAGTGATGGTGAT+TGG | 0.532126 | tig0026773:+29551 | Msa1430920:CDS |
| AGTGGTAGTACGGGCACCAC+CGG | 0.535051 | tig0026773:+29279 | Msa1430920:intron |
| GTGATTGGCGGGGTACCAAA+GGG | 0.538758 | tig0026773:+29566 | Msa1430920:CDS |
| TGCTACTTCTGTGCCTGCAA+TGG | 0.539629 | tig0026773:+29762 | Msa1430920:CDS |
| GTGGAAGAAGCTTCTGCTAG+TGG | 0.544361 | tig0026773:+29889 | Msa1430920:CDS |
| AAAGGAAATTGAATAGGTTG+CGG | 0.545323 | tig0026773:-28918 | Msa1430920:intergenic |
| GGTAAGAAGGCTGTGGTGGG+TGG | 0.548348 | tig0026773:+29802 | Msa1430920:CDS |
| ATAGCGAAGGATTTGAAGAA+TGG | 0.549445 | tig0026773:-28659 | Msa1430920:intergenic |
| AAATTCCCACTAAACCCTAA+AGG | 0.552901 | tig0026773:-29367 | Msa1430920:intergenic |
| TTGATGAGGTACAAAACAAT+GGG | 0.553432 | tig0026773:+29066 | Msa1430920:CDS |
| CGTGTAAGTCACGCGCGCTG+AGG | 0.553465 | tig0026773:-28507 | Msa1430920:intergenic |
| GACCAATTGAGAGGCCTAGG+AGG | 0.554781 | tig0026773:+29662 | Msa1430920:CDS |
| ACAGGTTCATTGGTTGACCT+AGG | 0.556407 | tig0026773:-29035 | Msa1430920:intergenic |
| AATGCCGAGGATAATATTGA+AGG | 0.557483 | tig0026773:+29943 | Msa1430920:CDS |
| TTCTTGTGCCCGAATGGCGA+AGG | 0.557741 | tig0026773:-28539 | Msa1430920:intergenic |
| ACCAATTGAGAGGCCTAGGA+GGG | 0.558221 | tig0026773:+29663 | Msa1430920:CDS |
| TAGCAGTGATGGTGATTGGC+GGG | 0.559217 | tig0026773:+29555 | Msa1430920:CDS |
| CGAAGAAGAATGCTCGGAAG+GGG | 0.559633 | tig0026773:+29461 | Msa1430920:CDS |
| TGCAAGACGGCGATATTGAT+CGG | 0.559726 | tig0026773:-28704 | Msa1430920:intergenic |
| GCGAAGAAGAATGCTCGGAA+GGG | 0.560744 | tig0026773:+29460 | Msa1430920:CDS |
| AGAAGACGGTGACGAGGGAG+AGG | 0.562730 | tig0026773:+29312 | Msa1430920:CDS |
| TCAATGGGTCTTCTTCGGAA+TGG | 0.566181 | tig0026773:+29398 | Msa1430920:CDS |
| GGTGACGAGGGAGAGGTTGG+TGG | 0.566487 | tig0026773:+29319 | Msa1430920:CDS |
| GCCCAGGCCGGAGTCTGCTG+GGG | 0.569311 | tig0026773:+29127 | Msa1430920:CDS |
| AGGGGAACGTAAACGGGACA+GGG | 0.570152 | tig0026773:+29920 | Msa1430920:CDS |
| CAATGAAACAAAGCAGACAT+AGG | 0.570623 | tig0026773:-29424 | Msa1430920:intergenic |
| GTGCCCGAATGGCGAAGGAA+CGG | 0.570710 | tig0026773:-28534 | Msa1430920:intergenic |
| AGCTGGTAAGAAGGCTGTGG+TGG | 0.571053 | tig0026773:+29798 | Msa1430920:CDS |
| GTGGTGGTGCTGATGTTGAA+AGG | 0.573169 | tig0026773:+29638 | Msa1430920:CDS |
| GGTTGCGGTTGTGGTGGTAA+AGG | 0.574236 | tig0026773:-28936 | Msa1430920:intergenic |
| TGCTGTGGTTGCGGTTGTGG+TGG | 0.579718 | tig0026773:-28942 | Msa1430920:intergenic |
| GAGAATGACAATGGTGGTGG+TGG | 0.580037 | tig0026773:+29709 | Msa1430920:CDS |
| ATTGATGAGGTACAAAACAA+TGG | 0.580790 | tig0026773:+29065 | Msa1430920:CDS |
| TGGTGGTGTTGTGGTTGCGG+CGG | 0.581614 | tig0026773:-28871 | Msa1430920:intergenic |
| AATCCCTTCAATATTATCCT+CGG | 0.583636 | tig0026773:-29947 | Msa1430920:intergenic |
| GGATGAAAATGCTGTGGTTG+CGG | 0.583652 | tig0026773:-28951 | Msa1430920:intergenic |
| GACTGGAGAAGACGGTGACG+AGG | 0.583753 | tig0026773:+29306 | Msa1430920:CDS |
| CCAAAGGGAGTAGGATGGGT+AGG | 0.584383 | tig0026773:+29581 | Msa1430920:CDS |
| TAACGTTGTTGCAGATGACA+AGG | 0.586965 | tig0026773:+30017 | Msa1430920:CDS |
| CTGTGGTGGGTGGTTCGAGA+AGG | 0.587944 | tig0026773:+29812 | Msa1430920:CDS |
| GGTACCAAAGGGAGTAGGAT+GGG | 0.588927 | tig0026773:+29577 | Msa1430920:CDS |
| AAATGTTGAAGCTGGTAAGA+AGG | 0.589973 | tig0026773:+29789 | Msa1430920:CDS |
| AAGGAGGAAGAGAAGAAGAG+GGG | 0.592224 | tig0026773:+29606 | Msa1430920:CDS |
| ATGCCGAGGATAATATTGAA+GGG | 0.593077 | tig0026773:+29944 | Msa1430920:CDS |
| CCGGAGGTGACTGGAGAAGA+CGG | 0.593141 | tig0026773:+29298 | Msa1430920:CDS |
| ATAGGTTGCGGTTGTTGCTG+TGG | 0.593211 | tig0026773:-28906 | Msa1430920:intergenic |
| GGGTAAGTTGGATTTGAATG+TGG | 0.594650 | tig0026773:+29852 | Msa1430920:CDS |
| AGCCACTGAACTTCTTCTTG+CGG | 0.598213 | tig0026773:+28579 | Msa1430920:CDS |
| TCTGCTAGTGGAGTGAGACA+GGG | 0.598631 | tig0026773:+29901 | Msa1430920:CDS |
| GGGTACCAAAGGGAGTAGGA+TGG | 0.600804 | tig0026773:+29576 | Msa1430920:CDS |
| CCAATTGAGAGGCCTAGGAG+GGG | 0.606765 | tig0026773:+29664 | Msa1430920:CDS |
| TCATCAGCATTGACATGACT+CGG | 0.609293 | tig0026773:-29089 | Msa1430920:intergenic |
| CTCAGCGCGCGTGACTTACA+CGG | 0.610260 | tig0026773:+28508 | Msa1430920:CDS |
| AATTGAGAGGCCTAGGAGGG+GGG | 0.610392 | tig0026773:+29666 | Msa1430920:CDS |
| TTGACTTGAACAGAAGGAGG+AGG | 0.615506 | tig0026773:-28972 | Msa1430920:intergenic |
| CAATATTCTGAGTATAGCGA+AGG | 0.617357 | tig0026773:-28672 | Msa1430920:intergenic |
| TTGTCGTTGACTTGAACAGA+AGG | 0.617497 | tig0026773:-28978 | Msa1430920:intergenic |
| ATGGTGTCAAATGTTGAAGC+TGG | 0.617929 | tig0026773:+29781 | Msa1430920:CDS |
| GTTTGACCGTCAGTTTCACC+GGG | 0.617980 | tig0026773:-29155 | Msa1430920:intergenic |
| GCTAAGCCCGGTGAAACTGA+CGG | 0.618764 | tig0026773:+29149 | Msa1430920:CDS |
| TCGTTGACTTGAACAGAAGG+AGG | 0.624401 | tig0026773:-28975 | Msa1430920:intergenic |
| GGCGGGGTACCAAAGGGAGT+AGG | 0.631128 | tig0026773:+29572 | Msa1430920:CDS |
| GTTATCGACACTCTCTTAGC+CGG | 0.631145 | tig0026773:+28601 | Msa1430920:CDS |
| TGACAATGTGGTTGATGATG+AGG | 0.631213 | tig0026773:+29732 | Msa1430920:CDS |
| TCAATGCTGATGAGTCTACT+GGG | 0.631414 | tig0026773:+29099 | Msa1430920:CDS |
| GCTGGTAAGAAGGCTGTGGT+GGG | 0.632182 | tig0026773:+29799 | Msa1430920:CDS |
| TCTTCTCCAGTCACCTCCGG+TGG | 0.632382 | tig0026773:-29295 | None:intergenic |
| TGAATGGATGGAAGCAACAG+AGG | 0.633889 | tig0026773:+28448 | None:intergenic |
| GTGGGTGGTTCGAGAAGGAG+AGG | 0.634386 | tig0026773:+29817 | Msa1430920:CDS |
| AGTGGCTTCGAATCTCGGGT+CGG | 0.636739 | tig0026773:-28563 | Msa1430920:intergenic |
| ATGGCGCGAAGAAGAATGCT+CGG | 0.638976 | tig0026773:+29455 | Msa1430920:CDS |
| GGTAGTACGGGCACCACCGG+AGG | 0.640935 | tig0026773:+29282 | Msa1430920:CDS |
| ATAGCAGTGATGGTGATTGG+CGG | 0.641839 | tig0026773:+29554 | Msa1430920:CDS |
| TTGAAAGGAGACCAATTGAG+AGG | 0.647944 | tig0026773:+29653 | Msa1430920:CDS |
| GATGATGATGATAGCAGTGA+TGG | 0.649786 | tig0026773:+29544 | Msa1430920:CDS |
| GCTGAGAATGACAATGGTGG+TGG | 0.654227 | tig0026773:+29706 | Msa1430920:CDS |
| CTGCTAGTGGAGTGAGACAG+GGG | 0.659459 | tig0026773:+29902 | Msa1430920:CDS |
| GGTCAAGGAGGATTGCAAGA+CGG | 0.660142 | tig0026773:-28717 | Msa1430920:intergenic |
| ACTGGAGAAGACGGTGACGA+GGG | 0.666817 | tig0026773:+29307 | Msa1430920:CDS |
| TGTGGAGTTCAGCAATGAGG+TGG | 0.670708 | tig0026773:+29870 | Msa1430920:CDS |
| AACCGCAAGAAGAAGTTCAG+TGG | 0.670841 | tig0026773:-28581 | Msa1430920:intergenic |
| GGTTGTTGCTGTGGATGTGG+TGG | 0.676015 | tig0026773:-28897 | Msa1430920:intergenic |
| GGTTACGGTTCGGGTCAAGG+AGG | 0.679710 | tig0026773:-28729 | Msa1430920:intergenic |
| TGAAGCTGGTAAGAAGGCTG+TGG | 0.683764 | tig0026773:+29795 | Msa1430920:CDS |
| GGAGGAGGATGAAAATGCTG+TGG | 0.684139 | tig0026773:-28957 | Msa1430920:intergenic |
| AGCAGTGATGGTGATTGGCG+GGG | 0.685255 | tig0026773:+29556 | Msa1430920:CDS |
| ACAGAGGTGAAGCTGAACGA+TGG | 0.691288 | tig0026773:+28464 | Msa1430920:CDS |
| TGGTGGTGGTGGTGACAATG+TGG | 0.696568 | tig0026773:+29720 | Msa1430920:CDS |
| GGTAATGCTGAGAATGACAA+TGG | 0.707753 | tig0026773:+29700 | Msa1430920:CDS |
| GAATGTGGAGTTCAGCAATG+AGG | 0.710179 | tig0026773:+29867 | Msa1430920:CDS |
| ACCTGTTAGGGTGATTGATG+AGG | 0.712723 | tig0026773:+29052 | Msa1430920:CDS |
| AAACGGGACAGGGAATGCCG+AGG | 0.720567 | tig0026773:+29930 | Msa1430920:CDS |
| AATGCTGAGAATGACAATGG+TGG | 0.774129 | tig0026773:+29703 | Msa1430920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATGATCATAATAACTAAA+AGG | - | tig0026773:29487-29506 | Msa1430920:intergenic | 20.0% |
| !! | TCATGATCATAATAACTAAA+AGG | - | tig0026773:29487-29506 | Msa1430920:intergenic | 20.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | + | tig0026773:29383-29402 | Msa1430920:CDS | 25.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | + | tig0026773:29383-29402 | Msa1430920:CDS | 25.0% |
| CTTATGAGGATTTGAGAAAA+TGG | - | tig0026773:28803-28822 | Msa1430920:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | - | tig0026773:28817-28836 | Msa1430920:intergenic | 30.0% | |
| AAAGGAAATTGAATAGGTTG+CGG | - | tig0026773:28921-28940 | Msa1430920:intergenic | 30.0% | |
| ATTGATGAGGTACAAAACAA+TGG | + | tig0026773:29065-29084 | Msa1430920:CDS | 30.0% | |
| TTGATGAGGTACAAAACAAT+GGG | + | tig0026773:29066-29085 | Msa1430920:CDS | 30.0% | |
| TGTGCAATCAAATAAACCTT+AGG | - | tig0026773:29224-29243 | Msa1430920:intergenic | 30.0% | |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | + | tig0026773:29362-29381 | Msa1430920:CDS | 30.0% |
| !! | GGGAATTTTAAGGATATCAA+TGG | + | tig0026773:29382-29401 | Msa1430920:CDS | 30.0% |
| AATCCCTTCAATATTATCCT+CGG | - | tig0026773:29950-29969 | Msa1430920:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | + | tig0026773:29950-29969 | Msa1430920:CDS | 30.0% | |
| CTTATGAGGATTTGAGAAAA+TGG | - | tig0026773:28803-28822 | Msa1430920:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | - | tig0026773:28817-28836 | Msa1430920:intergenic | 30.0% | |
| AAAGGAAATTGAATAGGTTG+CGG | - | tig0026773:28921-28940 | Msa1430920:intergenic | 30.0% | |
| ATTGATGAGGTACAAAACAA+TGG | + | tig0026773:29065-29084 | Msa1430920:CDS | 30.0% | |
| TTGATGAGGTACAAAACAAT+GGG | + | tig0026773:29066-29085 | Msa1430920:CDS | 30.0% | |
| TGTGCAATCAAATAAACCTT+AGG | - | tig0026773:29224-29243 | Msa1430920:intergenic | 30.0% | |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | + | tig0026773:29362-29381 | Msa1430920:CDS | 30.0% |
| !! | GGGAATTTTAAGGATATCAA+TGG | + | tig0026773:29382-29401 | Msa1430920:CDS | 30.0% |
| AATCCCTTCAATATTATCCT+CGG | - | tig0026773:29950-29969 | Msa1430920:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | + | tig0026773:29950-29969 | Msa1430920:CDS | 30.0% | |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | - | tig0026773:28623-28642 | Msa1430920:intergenic | 35.0% |
| ATAGCGAAGGATTTGAAGAA+TGG | - | tig0026773:28662-28681 | Msa1430920:intergenic | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | - | tig0026773:28675-28694 | Msa1430920:intergenic | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | - | tig0026773:28927-28946 | Msa1430920:intergenic | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | + | tig0026773:29018-29037 | Msa1430920:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | - | tig0026773:29197-29216 | Msa1430920:intergenic | 35.0% | |
| GTTTATTTGATTGCACACTC+CGG | + | tig0026773:29227-29246 | Msa1430920:intron | 35.0% | |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | + | tig0026773:29338-29357 | Msa1430920:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | + | tig0026773:29361-29380 | Msa1430920:CDS | 35.0% |
| AAATTCCCACTAAACCCTAA+AGG | - | tig0026773:29370-29389 | Msa1430920:intergenic | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | + | tig0026773:29372-29391 | Msa1430920:CDS | 35.0% |
| CAATGAAACAAAGCAGACAT+AGG | - | tig0026773:29427-29446 | Msa1430920:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | + | tig0026773:29436-29455 | Msa1430920:CDS | 35.0% | |
| AAATGTTGAAGCTGGTAAGA+AGG | + | tig0026773:29789-29808 | Msa1430920:CDS | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | + | tig0026773:29943-29962 | Msa1430920:CDS | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | + | tig0026773:29944-29963 | Msa1430920:CDS | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | + | tig0026773:29949-29968 | Msa1430920:CDS | 35.0% | |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | + | tig0026773:29962-29981 | Msa1430920:CDS | 35.0% |
| TAAGAATTGGCAAGCTACTA+AGG | - | tig0026773:29999-30018 | Msa1430920:intergenic | 35.0% | |
| TCTGCAACAACGTTAAGAAT+TGG | - | tig0026773:30012-30031 | Msa1430920:intergenic | 35.0% | |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | - | tig0026773:28623-28642 | Msa1430920:intergenic | 35.0% |
| ATAGCGAAGGATTTGAAGAA+TGG | - | tig0026773:28662-28681 | Msa1430920:intergenic | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | - | tig0026773:28675-28694 | Msa1430920:intergenic | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | - | tig0026773:28927-28946 | Msa1430920:intergenic | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | + | tig0026773:29018-29037 | Msa1430920:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | - | tig0026773:29197-29216 | Msa1430920:intergenic | 35.0% | |
| GTTTATTTGATTGCACACTC+CGG | + | tig0026773:29227-29246 | Msa1430920:intron | 35.0% | |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | + | tig0026773:29338-29357 | Msa1430920:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | + | tig0026773:29361-29380 | Msa1430920:CDS | 35.0% |
| AAATTCCCACTAAACCCTAA+AGG | - | tig0026773:29370-29389 | Msa1430920:intergenic | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | + | tig0026773:29372-29391 | Msa1430920:CDS | 35.0% |
| CAATGAAACAAAGCAGACAT+AGG | - | tig0026773:29427-29446 | Msa1430920:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | + | tig0026773:29436-29455 | Msa1430920:CDS | 35.0% | |
| AAATGTTGAAGCTGGTAAGA+AGG | + | tig0026773:29789-29808 | Msa1430920:CDS | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | + | tig0026773:29943-29962 | Msa1430920:CDS | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | + | tig0026773:29944-29963 | Msa1430920:CDS | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | + | tig0026773:29949-29968 | Msa1430920:CDS | 35.0% | |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | + | tig0026773:29962-29981 | Msa1430920:CDS | 35.0% |
| TAAGAATTGGCAAGCTACTA+AGG | - | tig0026773:29999-30018 | Msa1430920:intergenic | 35.0% | |
| TCTGCAACAACGTTAAGAAT+TGG | - | tig0026773:30012-30031 | Msa1430920:intergenic | 35.0% | |
| !! | TTGTCGTTGACTTGAACAGA+AGG | - | tig0026773:28981-29000 | Msa1430920:intergenic | 40.0% |
| GTCAACCAATGAACCTGTTA+GGG | + | tig0026773:29040-29059 | Msa1430920:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | - | tig0026773:29048-29067 | Msa1430920:intergenic | 40.0% | |
| !! | TCATCAGCATTGACATGACT+CGG | - | tig0026773:29092-29111 | Msa1430920:intergenic | 40.0% |
| TCAATGCTGATGAGTCTACT+GGG | + | tig0026773:29099-29118 | Msa1430920:CDS | 40.0% | |
| AAACTGACGGTCAAACTTTC+TGG | + | tig0026773:29162-29181 | Msa1430920:intron | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | + | tig0026773:29205-29224 | Msa1430920:intron | 40.0% | |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | + | tig0026773:29269-29288 | Msa1430920:intron | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | + | tig0026773:29270-29289 | Msa1430920:intron | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | + | tig0026773:29337-29356 | Msa1430920:CDS | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | + | tig0026773:29352-29371 | Msa1430920:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | + | tig0026773:29353-29372 | Msa1430920:CDS | 40.0% |
| GGATATCAATGGGTCTTCTT+CGG | + | tig0026773:29393-29412 | Msa1430920:CDS | 40.0% | |
| ! | GATGATGATGATAGCAGTGA+TGG | + | tig0026773:29544-29563 | Msa1430920:CDS | 40.0% |
| ! | ATGATAGCAGTGATGGTGAT+TGG | + | tig0026773:29551-29570 | Msa1430920:CDS | 40.0% |
| TTGAAAGGAGACCAATTGAG+AGG | + | tig0026773:29653-29672 | Msa1430920:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | + | tig0026773:29700-29719 | Msa1430920:CDS | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | + | tig0026773:29703-29722 | Msa1430920:CDS | 40.0% | |
| !! | TGACAATGTGGTTGATGATG+AGG | + | tig0026773:29732-29751 | Msa1430920:CDS | 40.0% |
| TCAACATTTGACACCATTGC+AGG | - | tig0026773:29778-29797 | Msa1430920:intergenic | 40.0% | |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | + | tig0026773:29781-29800 | Msa1430920:CDS | 40.0% |
| TGCTGGAAATTTGGGTAAGT+TGG | + | tig0026773:29840-29859 | Msa1430920:CDS | 40.0% | |
| ! | GGGTAAGTTGGATTTGAATG+TGG | + | tig0026773:29852-29871 | Msa1430920:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | + | tig0026773:29961-29980 | Msa1430920:CDS | 40.0% |
| TAACGTTGTTGCAGATGACA+AGG | + | tig0026773:30017-30036 | Msa1430920:CDS | 40.0% | |
| !! | TTGTCGTTGACTTGAACAGA+AGG | - | tig0026773:28981-29000 | Msa1430920:intergenic | 40.0% |
| GTCAACCAATGAACCTGTTA+GGG | + | tig0026773:29040-29059 | Msa1430920:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | - | tig0026773:29048-29067 | Msa1430920:intergenic | 40.0% | |
| !! | TCATCAGCATTGACATGACT+CGG | - | tig0026773:29092-29111 | Msa1430920:intergenic | 40.0% |
| TCAATGCTGATGAGTCTACT+GGG | + | tig0026773:29099-29118 | Msa1430920:CDS | 40.0% | |
| AAACTGACGGTCAAACTTTC+TGG | + | tig0026773:29162-29181 | Msa1430920:intron | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | + | tig0026773:29205-29224 | Msa1430920:intron | 40.0% | |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | + | tig0026773:29269-29288 | Msa1430920:intron | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | + | tig0026773:29270-29289 | Msa1430920:intron | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | + | tig0026773:29337-29356 | Msa1430920:CDS | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | + | tig0026773:29352-29371 | Msa1430920:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | + | tig0026773:29353-29372 | Msa1430920:CDS | 40.0% |
| GGATATCAATGGGTCTTCTT+CGG | + | tig0026773:29393-29412 | Msa1430920:CDS | 40.0% | |
| ! | GATGATGATGATAGCAGTGA+TGG | + | tig0026773:29544-29563 | Msa1430920:CDS | 40.0% |
| ! | ATGATAGCAGTGATGGTGAT+TGG | + | tig0026773:29551-29570 | Msa1430920:CDS | 40.0% |
| TTGAAAGGAGACCAATTGAG+AGG | + | tig0026773:29653-29672 | Msa1430920:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | + | tig0026773:29700-29719 | Msa1430920:CDS | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | + | tig0026773:29703-29722 | Msa1430920:CDS | 40.0% | |
| !! | TGACAATGTGGTTGATGATG+AGG | + | tig0026773:29732-29751 | Msa1430920:CDS | 40.0% |
| TCAACATTTGACACCATTGC+AGG | - | tig0026773:29778-29797 | Msa1430920:intergenic | 40.0% | |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | + | tig0026773:29781-29800 | Msa1430920:CDS | 40.0% |
| TGCTGGAAATTTGGGTAAGT+TGG | + | tig0026773:29840-29859 | Msa1430920:CDS | 40.0% | |
| ! | GGGTAAGTTGGATTTGAATG+TGG | + | tig0026773:29852-29871 | Msa1430920:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | + | tig0026773:29961-29980 | Msa1430920:CDS | 40.0% |
| TAACGTTGTTGCAGATGACA+AGG | + | tig0026773:30017-30036 | Msa1430920:CDS | 40.0% | |
| AGTTCAGTGGCTTCGAATCT+CGG | - | tig0026773:28571-28590 | Msa1430920:intergenic | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | + | tig0026773:28579-28598 | Msa1430920:CDS | 45.0% | |
| AACCGCAAGAAGAAGTTCAG+TGG | - | tig0026773:28584-28603 | Msa1430920:intergenic | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | + | tig0026773:28601-28620 | Msa1430920:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | - | tig0026773:28707-28726 | Msa1430920:intergenic | 45.0% | |
| !! | TAAGCAAACGGGTTACGGTT+CGG | - | tig0026773:28742-28761 | Msa1430920:intergenic | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | - | tig0026773:28747-28766 | Msa1430920:intergenic | 45.0% |
| CATGAGCAGCATAAGCAAAC+GGG | - | tig0026773:28753-28772 | Msa1430920:intergenic | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | - | tig0026773:28754-28773 | Msa1430920:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | + | tig0026773:28776-28795 | Msa1430920:intron | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | - | tig0026773:28954-28973 | Msa1430920:intergenic | 45.0% | |
| ! | TTGACTTGAACAGAAGGAGG+AGG | - | tig0026773:28975-28994 | Msa1430920:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | - | tig0026773:28978-28997 | Msa1430920:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | - | tig0026773:29031-29050 | Msa1430920:intergenic | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | - | tig0026773:29037-29056 | Msa1430920:intergenic | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | - | tig0026773:29038-29057 | Msa1430920:intergenic | 45.0% |
| GGTCAACCAATGAACCTGTT+AGG | + | tig0026773:29039-29058 | Msa1430920:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | + | tig0026773:29052-29071 | Msa1430920:CDS | 45.0% | |
| ACCTCATCAATCACCCTAAC+AGG | - | tig0026773:29056-29075 | Msa1430920:intergenic | 45.0% | |
| GTCAATGCTGATGAGTCTAC+TGG | + | tig0026773:29098-29117 | Msa1430920:CDS | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | - | tig0026773:29159-29178 | Msa1430920:intergenic | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | + | tig0026773:29166-29185 | Msa1430920:intron | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | - | tig0026773:29192-29211 | Msa1430920:intergenic | 45.0% | |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | + | tig0026773:29245-29264 | Msa1430920:intron | 45.0% |
| CCCTCTTACAATTCTGACAC+CGG | - | tig0026773:29249-29268 | Msa1430920:intergenic | 45.0% | |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | + | tig0026773:29246-29265 | Msa1430920:intron | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | + | tig0026773:29247-29266 | Msa1430920:intron | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | + | tig0026773:29261-29280 | Msa1430920:intron | 45.0% |
| TCAATGGGTCTTCTTCGGAA+TGG | + | tig0026773:29398-29417 | Msa1430920:CDS | 45.0% | |
| TCTTCTTCGCGCCATTCATA+GGG | - | tig0026773:29450-29469 | Msa1430920:intergenic | 45.0% | |
| TTCTTCTTCGCGCCATTCAT+AGG | - | tig0026773:29451-29470 | Msa1430920:intergenic | 45.0% | |
| ! | ATAGCAGTGATGGTGATTGG+CGG | + | tig0026773:29554-29573 | Msa1430920:CDS | 45.0% |
| AGAAGGAGGAAGAGAAGAAG+AGG | + | tig0026773:29604-29623 | Msa1430920:CDS | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | + | tig0026773:29605-29624 | Msa1430920:CDS | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | + | tig0026773:29606-29625 | Msa1430920:CDS | 45.0% | |
| ! | AAGAGAAGAAGAGGGGCTTT+TGG | + | tig0026773:29613-29632 | Msa1430920:CDS | 45.0% |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | + | tig0026773:29831-29850 | Msa1430920:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | + | tig0026773:29832-29851 | Msa1430920:CDS | 45.0% |
| GAATGTGGAGTTCAGCAATG+AGG | + | tig0026773:29867-29886 | Msa1430920:CDS | 45.0% | |
| AGTTCAGTGGCTTCGAATCT+CGG | - | tig0026773:28571-28590 | Msa1430920:intergenic | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | + | tig0026773:28579-28598 | Msa1430920:CDS | 45.0% | |
| AACCGCAAGAAGAAGTTCAG+TGG | - | tig0026773:28584-28603 | Msa1430920:intergenic | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | + | tig0026773:28601-28620 | Msa1430920:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | - | tig0026773:28707-28726 | Msa1430920:intergenic | 45.0% | |
| !! | TAAGCAAACGGGTTACGGTT+CGG | - | tig0026773:28742-28761 | Msa1430920:intergenic | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | - | tig0026773:28747-28766 | Msa1430920:intergenic | 45.0% |
| CATGAGCAGCATAAGCAAAC+GGG | - | tig0026773:28753-28772 | Msa1430920:intergenic | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | - | tig0026773:28754-28773 | Msa1430920:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | + | tig0026773:28776-28795 | Msa1430920:intron | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | - | tig0026773:28954-28973 | Msa1430920:intergenic | 45.0% | |
| ! | TTGACTTGAACAGAAGGAGG+AGG | - | tig0026773:28975-28994 | Msa1430920:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | - | tig0026773:28978-28997 | Msa1430920:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | - | tig0026773:29031-29050 | Msa1430920:intergenic | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | - | tig0026773:29037-29056 | Msa1430920:intergenic | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | - | tig0026773:29038-29057 | Msa1430920:intergenic | 45.0% |
| GGTCAACCAATGAACCTGTT+AGG | + | tig0026773:29039-29058 | Msa1430920:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | + | tig0026773:29052-29071 | Msa1430920:CDS | 45.0% | |
| ACCTCATCAATCACCCTAAC+AGG | - | tig0026773:29056-29075 | Msa1430920:intergenic | 45.0% | |
| GTCAATGCTGATGAGTCTAC+TGG | + | tig0026773:29098-29117 | Msa1430920:CDS | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | - | tig0026773:29159-29178 | Msa1430920:intergenic | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | + | tig0026773:29166-29185 | Msa1430920:intron | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | - | tig0026773:29192-29211 | Msa1430920:intergenic | 45.0% | |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | + | tig0026773:29245-29264 | Msa1430920:intron | 45.0% |
| CCCTCTTACAATTCTGACAC+CGG | - | tig0026773:29249-29268 | Msa1430920:intergenic | 45.0% | |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | + | tig0026773:29246-29265 | Msa1430920:intron | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | + | tig0026773:29247-29266 | Msa1430920:intron | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | + | tig0026773:29261-29280 | Msa1430920:intron | 45.0% |
| TCAATGGGTCTTCTTCGGAA+TGG | + | tig0026773:29398-29417 | Msa1430920:CDS | 45.0% | |
| TCTTCTTCGCGCCATTCATA+GGG | - | tig0026773:29450-29469 | Msa1430920:intergenic | 45.0% | |
| TTCTTCTTCGCGCCATTCAT+AGG | - | tig0026773:29451-29470 | Msa1430920:intergenic | 45.0% | |
| ! | ATAGCAGTGATGGTGATTGG+CGG | + | tig0026773:29554-29573 | Msa1430920:CDS | 45.0% |
| AGAAGGAGGAAGAGAAGAAG+AGG | + | tig0026773:29604-29623 | Msa1430920:CDS | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | + | tig0026773:29605-29624 | Msa1430920:CDS | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | + | tig0026773:29606-29625 | Msa1430920:CDS | 45.0% | |
| ! | AAGAGAAGAAGAGGGGCTTT+TGG | + | tig0026773:29613-29632 | Msa1430920:CDS | 45.0% |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | + | tig0026773:29831-29850 | Msa1430920:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | + | tig0026773:29832-29851 | Msa1430920:CDS | 45.0% |
| GAATGTGGAGTTCAGCAATG+AGG | + | tig0026773:29867-29886 | Msa1430920:CDS | 45.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | + | tig0026773:28464-28483 | Msa1430920:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | - | tig0026773:28570-28589 | Msa1430920:intergenic | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | - | tig0026773:28720-28739 | Msa1430920:intergenic | 50.0% | |
| !! | AAGCAAACGGGTTACGGTTC+GGG | - | tig0026773:28741-28760 | Msa1430920:intergenic | 50.0% |
| ATAGGTTGCGGTTGTTGCTG+TGG | - | tig0026773:28909-28928 | Msa1430920:intergenic | 50.0% | |
| AAATGCTGTGGTTGCGGTTG+TGG | - | tig0026773:28948-28967 | Msa1430920:intergenic | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | - | tig0026773:28960-28979 | Msa1430920:intergenic | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | - | tig0026773:29158-29177 | Msa1430920:intergenic | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | + | tig0026773:29185-29204 | Msa1430920:intron | 50.0% | |
| ATGGCGCGAAGAAGAATGCT+CGG | + | tig0026773:29455-29474 | Msa1430920:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | + | tig0026773:29460-29479 | Msa1430920:CDS | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | + | tig0026773:29461-29480 | Msa1430920:CDS | 50.0% | |
| ! | TAGCAGTGATGGTGATTGGC+GGG | + | tig0026773:29555-29574 | Msa1430920:CDS | 50.0% |
| GGTACCAAAGGGAGTAGGAT+GGG | + | tig0026773:29577-29596 | Msa1430920:CDS | 50.0% | |
| ! | AGAAGAAGAGGGGCTTTTGG+TGG | + | tig0026773:29616-29635 | Msa1430920:CDS | 50.0% |
| !! | GTGGTGGTGCTGATGTTGAA+AGG | + | tig0026773:29638-29657 | Msa1430920:CDS | 50.0% |
| ACCAATTGAGAGGCCTAGGA+GGG | + | tig0026773:29663-29682 | Msa1430920:CDS | 50.0% | |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | - | tig0026773:29679-29698 | Msa1430920:intergenic | 50.0% |
| AGGAGGGGGGTTCAACAAAA+TGG | + | tig0026773:29679-29698 | Msa1430920:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | + | tig0026773:29706-29725 | Msa1430920:CDS | 50.0% | |
| !! | GAGAATGACAATGGTGGTGG+TGG | + | tig0026773:29709-29728 | Msa1430920:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | + | tig0026773:29762-29781 | Msa1430920:CDS | 50.0% |
| TGAAGCTGGTAAGAAGGCTG+TGG | + | tig0026773:29795-29814 | Msa1430920:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | + | tig0026773:29870-29889 | Msa1430920:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | + | tig0026773:29889-29908 | Msa1430920:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | + | tig0026773:29900-29919 | Msa1430920:CDS | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | + | tig0026773:29901-29920 | Msa1430920:CDS | 50.0% | |
| GTGAGACAGGGGAACGTAAA+CGG | + | tig0026773:29913-29932 | Msa1430920:CDS | 50.0% | |
| TGAGACAGGGGAACGTAAAC+GGG | + | tig0026773:29914-29933 | Msa1430920:CDS | 50.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | + | tig0026773:28464-28483 | Msa1430920:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | - | tig0026773:28570-28589 | Msa1430920:intergenic | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | - | tig0026773:28720-28739 | Msa1430920:intergenic | 50.0% | |
| !! | AAGCAAACGGGTTACGGTTC+GGG | - | tig0026773:28741-28760 | Msa1430920:intergenic | 50.0% |
| ATAGGTTGCGGTTGTTGCTG+TGG | - | tig0026773:28909-28928 | Msa1430920:intergenic | 50.0% | |
| AAATGCTGTGGTTGCGGTTG+TGG | - | tig0026773:28948-28967 | Msa1430920:intergenic | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | - | tig0026773:28960-28979 | Msa1430920:intergenic | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | - | tig0026773:29158-29177 | Msa1430920:intergenic | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | + | tig0026773:29185-29204 | Msa1430920:intron | 50.0% | |
| ATGGCGCGAAGAAGAATGCT+CGG | + | tig0026773:29455-29474 | Msa1430920:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | + | tig0026773:29460-29479 | Msa1430920:CDS | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | + | tig0026773:29461-29480 | Msa1430920:CDS | 50.0% | |
| ! | TAGCAGTGATGGTGATTGGC+GGG | + | tig0026773:29555-29574 | Msa1430920:CDS | 50.0% |
| GGTACCAAAGGGAGTAGGAT+GGG | + | tig0026773:29577-29596 | Msa1430920:CDS | 50.0% | |
| ! | AGAAGAAGAGGGGCTTTTGG+TGG | + | tig0026773:29616-29635 | Msa1430920:CDS | 50.0% |
| !! | GTGGTGGTGCTGATGTTGAA+AGG | + | tig0026773:29638-29657 | Msa1430920:CDS | 50.0% |
| ACCAATTGAGAGGCCTAGGA+GGG | + | tig0026773:29663-29682 | Msa1430920:CDS | 50.0% | |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | - | tig0026773:29679-29698 | Msa1430920:intergenic | 50.0% |
| AGGAGGGGGGTTCAACAAAA+TGG | + | tig0026773:29679-29698 | Msa1430920:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | + | tig0026773:29706-29725 | Msa1430920:CDS | 50.0% | |
| !! | GAGAATGACAATGGTGGTGG+TGG | + | tig0026773:29709-29728 | Msa1430920:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | + | tig0026773:29762-29781 | Msa1430920:CDS | 50.0% |
| TGAAGCTGGTAAGAAGGCTG+TGG | + | tig0026773:29795-29814 | Msa1430920:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | + | tig0026773:29870-29889 | Msa1430920:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | + | tig0026773:29889-29908 | Msa1430920:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | + | tig0026773:29900-29919 | Msa1430920:CDS | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | + | tig0026773:29901-29920 | Msa1430920:CDS | 50.0% | |
| GTGAGACAGGGGAACGTAAA+CGG | + | tig0026773:29913-29932 | Msa1430920:CDS | 50.0% | |
| TGAGACAGGGGAACGTAAAC+GGG | + | tig0026773:29914-29933 | Msa1430920:CDS | 50.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | - | tig0026773:28542-28561 | Msa1430920:intergenic | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | - | tig0026773:28548-28567 | Msa1430920:intergenic | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | - | tig0026773:28566-28585 | Msa1430920:intergenic | 55.0% | |
| !! | TGGTGGTGGTGTTGTGGTTG+CGG | - | tig0026773:28877-28896 | Msa1430920:intergenic | 55.0% |
| TGTTGCTGTGGATGTGGTGG+TGG | - | tig0026773:28897-28916 | Msa1430920:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | - | tig0026773:28900-28919 | Msa1430920:intergenic | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | - | tig0026773:28903-28922 | Msa1430920:intergenic | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | - | tig0026773:28939-28958 | Msa1430920:intergenic | 55.0% | |
| CTGATGAGTCTACTGGGCCT+AGG | + | tig0026773:29105-29124 | Msa1430920:CDS | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | + | tig0026773:29149-29168 | Msa1430920:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | + | tig0026773:29307-29326 | Msa1430920:CDS | 55.0% | |
| CGCGAAGAAGAATGCTCGGA+AGG | + | tig0026773:29459-29478 | Msa1430920:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | + | tig0026773:29504-29523 | Msa1430920:CDS | 55.0% | |
| ! | AGCAGTGATGGTGATTGGCG+GGG | + | tig0026773:29556-29575 | Msa1430920:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | + | tig0026773:29566-29585 | Msa1430920:CDS | 55.0% |
| GGGTACCAAAGGGAGTAGGA+TGG | + | tig0026773:29576-29595 | Msa1430920:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | - | tig0026773:29584-29603 | Msa1430920:intergenic | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | + | tig0026773:29581-29600 | Msa1430920:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | + | tig0026773:29587-29606 | Msa1430920:CDS | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | + | tig0026773:29590-29609 | Msa1430920:CDS | 55.0% | |
| ! | AGAAGAGGGGCTTTTGGTGG+TGG | + | tig0026773:29619-29638 | Msa1430920:CDS | 55.0% |
| GGAGACCAATTGAGAGGCCT+AGG | + | tig0026773:29659-29678 | Msa1430920:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | + | tig0026773:29662-29681 | Msa1430920:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | + | tig0026773:29664-29683 | Msa1430920:CDS | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | + | tig0026773:29665-29684 | Msa1430920:CDS | 55.0% | |
| AATTGAGAGGCCTAGGAGGG+GGG | + | tig0026773:29666-29685 | Msa1430920:CDS | 55.0% | |
| !! | TGGTGGTGGTGGTGACAATG+TGG | + | tig0026773:29720-29739 | Msa1430920:CDS | 55.0% |
| AGCTGGTAAGAAGGCTGTGG+TGG | + | tig0026773:29798-29817 | Msa1430920:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | + | tig0026773:29799-29818 | Msa1430920:CDS | 55.0% | |
| CTGCTAGTGGAGTGAGACAG+GGG | + | tig0026773:29902-29921 | Msa1430920:CDS | 55.0% | |
| AGGGGAACGTAAACGGGACA+GGG | + | tig0026773:29920-29939 | Msa1430920:CDS | 55.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | - | tig0026773:28542-28561 | Msa1430920:intergenic | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | - | tig0026773:28548-28567 | Msa1430920:intergenic | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | - | tig0026773:28566-28585 | Msa1430920:intergenic | 55.0% | |
| !! | TGGTGGTGGTGTTGTGGTTG+CGG | - | tig0026773:28877-28896 | Msa1430920:intergenic | 55.0% |
| TGTTGCTGTGGATGTGGTGG+TGG | - | tig0026773:28897-28916 | Msa1430920:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | - | tig0026773:28900-28919 | Msa1430920:intergenic | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | - | tig0026773:28903-28922 | Msa1430920:intergenic | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | - | tig0026773:28939-28958 | Msa1430920:intergenic | 55.0% | |
| CTGATGAGTCTACTGGGCCT+AGG | + | tig0026773:29105-29124 | Msa1430920:CDS | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | + | tig0026773:29149-29168 | Msa1430920:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | + | tig0026773:29307-29326 | Msa1430920:CDS | 55.0% | |
| CGCGAAGAAGAATGCTCGGA+AGG | + | tig0026773:29459-29478 | Msa1430920:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | + | tig0026773:29504-29523 | Msa1430920:CDS | 55.0% | |
| ! | AGCAGTGATGGTGATTGGCG+GGG | + | tig0026773:29556-29575 | Msa1430920:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | + | tig0026773:29566-29585 | Msa1430920:CDS | 55.0% |
| GGGTACCAAAGGGAGTAGGA+TGG | + | tig0026773:29576-29595 | Msa1430920:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | - | tig0026773:29584-29603 | Msa1430920:intergenic | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | + | tig0026773:29581-29600 | Msa1430920:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | + | tig0026773:29587-29606 | Msa1430920:CDS | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | + | tig0026773:29590-29609 | Msa1430920:CDS | 55.0% | |
| ! | AGAAGAGGGGCTTTTGGTGG+TGG | + | tig0026773:29619-29638 | Msa1430920:CDS | 55.0% |
| GGAGACCAATTGAGAGGCCT+AGG | + | tig0026773:29659-29678 | Msa1430920:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | + | tig0026773:29662-29681 | Msa1430920:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | + | tig0026773:29664-29683 | Msa1430920:CDS | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | + | tig0026773:29665-29684 | Msa1430920:CDS | 55.0% | |
| AATTGAGAGGCCTAGGAGGG+GGG | + | tig0026773:29666-29685 | Msa1430920:CDS | 55.0% | |
| !! | TGGTGGTGGTGGTGACAATG+TGG | + | tig0026773:29720-29739 | Msa1430920:CDS | 55.0% |
| AGCTGGTAAGAAGGCTGTGG+TGG | + | tig0026773:29798-29817 | Msa1430920:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | + | tig0026773:29799-29818 | Msa1430920:CDS | 55.0% | |
| CTGCTAGTGGAGTGAGACAG+GGG | + | tig0026773:29902-29921 | Msa1430920:CDS | 55.0% | |
| AGGGGAACGTAAACGGGACA+GGG | + | tig0026773:29920-29939 | Msa1430920:CDS | 55.0% | |
| ACGCGCGCTGAGGAGTTTGT+TGG | - | tig0026773:28500-28519 | Msa1430920:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | + | tig0026773:28508-28527 | Msa1430920:CDS | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | - | tig0026773:28536-28555 | Msa1430920:intergenic | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | - | tig0026773:28537-28556 | Msa1430920:intergenic | 60.0% | |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | - | tig0026773:28732-28751 | Msa1430920:intergenic | 60.0% |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | - | tig0026773:28735-28754 | Msa1430920:intergenic | 60.0% |
| !! | TGGTGGTGTTGTGGTTGCGG+CGG | - | tig0026773:28874-28893 | Msa1430920:intergenic | 60.0% |
| !! | TGGTGGTGGTGGTGGTGTTG+TGG | - | tig0026773:28883-28902 | Msa1430920:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | - | tig0026773:28891-28910 | Msa1430920:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | - | tig0026773:28894-28913 | Msa1430920:intergenic | 60.0% |
| TGCTGTGGTTGCGGTTGTGG+TGG | - | tig0026773:28945-28964 | Msa1430920:intergenic | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | + | tig0026773:29279-29298 | Msa1430920:intron | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | - | tig0026773:29298-29317 | Msa1430920:intergenic | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | - | tig0026773:29301-29320 | Msa1430920:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | + | tig0026773:29298-29317 | Msa1430920:CDS | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | + | tig0026773:29306-29325 | Msa1430920:CDS | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | + | tig0026773:29312-29331 | Msa1430920:CDS | 60.0% | |
| ! | GGTGATTGGCGGGGTACCAA+AGG | + | tig0026773:29565-29584 | Msa1430920:CDS | 60.0% |
| !!! | AGAGGGGCTTTTGGTGGTGG+TGG | + | tig0026773:29622-29641 | Msa1430920:CDS | 60.0% |
| CCCCTCCTAGGCCTCTCAAT+TGG | - | tig0026773:29667-29686 | Msa1430920:intergenic | 60.0% | |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | + | tig0026773:29802-29821 | Msa1430920:CDS | 60.0% |
| !! | CTGTGGTGGGTGGTTCGAGA+AGG | + | tig0026773:29812-29831 | Msa1430920:CDS | 60.0% |
| GTGGGTGGTTCGAGAAGGAG+AGG | + | tig0026773:29817-29836 | Msa1430920:CDS | 60.0% | |
| ! | GGTTCGAGAAGGAGAGGTGC+TGG | + | tig0026773:29823-29842 | Msa1430920:CDS | 60.0% |
| CAGGGGAACGTAAACGGGAC+AGG | + | tig0026773:29919-29938 | Msa1430920:CDS | 60.0% | |
| AAACGGGACAGGGAATGCCG+AGG | + | tig0026773:29930-29949 | Msa1430920:CDS | 60.0% | |
| ACGCGCGCTGAGGAGTTTGT+TGG | - | tig0026773:28500-28519 | Msa1430920:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | + | tig0026773:28508-28527 | Msa1430920:CDS | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | - | tig0026773:28536-28555 | Msa1430920:intergenic | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | - | tig0026773:28537-28556 | Msa1430920:intergenic | 60.0% | |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | - | tig0026773:28732-28751 | Msa1430920:intergenic | 60.0% |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | - | tig0026773:28735-28754 | Msa1430920:intergenic | 60.0% |
| !! | TGGTGGTGTTGTGGTTGCGG+CGG | - | tig0026773:28874-28893 | Msa1430920:intergenic | 60.0% |
| !! | TGGTGGTGGTGGTGGTGTTG+TGG | - | tig0026773:28883-28902 | Msa1430920:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | - | tig0026773:28891-28910 | Msa1430920:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | - | tig0026773:28894-28913 | Msa1430920:intergenic | 60.0% |
| TGCTGTGGTTGCGGTTGTGG+TGG | - | tig0026773:28945-28964 | Msa1430920:intergenic | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | + | tig0026773:29279-29298 | Msa1430920:intron | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | - | tig0026773:29298-29317 | Msa1430920:intergenic | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | - | tig0026773:29301-29320 | Msa1430920:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | + | tig0026773:29298-29317 | Msa1430920:CDS | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | + | tig0026773:29306-29325 | Msa1430920:CDS | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | + | tig0026773:29312-29331 | Msa1430920:CDS | 60.0% | |
| ! | GGTGATTGGCGGGGTACCAA+AGG | + | tig0026773:29565-29584 | Msa1430920:CDS | 60.0% |
| !!! | AGAGGGGCTTTTGGTGGTGG+TGG | + | tig0026773:29622-29641 | Msa1430920:CDS | 60.0% |
| CCCCTCCTAGGCCTCTCAAT+TGG | - | tig0026773:29667-29686 | Msa1430920:intergenic | 60.0% | |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | + | tig0026773:29802-29821 | Msa1430920:CDS | 60.0% |
| !! | CTGTGGTGGGTGGTTCGAGA+AGG | + | tig0026773:29812-29831 | Msa1430920:CDS | 60.0% |
| GTGGGTGGTTCGAGAAGGAG+AGG | + | tig0026773:29817-29836 | Msa1430920:CDS | 60.0% | |
| ! | GGTTCGAGAAGGAGAGGTGC+TGG | + | tig0026773:29823-29842 | Msa1430920:CDS | 60.0% |
| CAGGGGAACGTAAACGGGAC+AGG | + | tig0026773:29919-29938 | Msa1430920:CDS | 60.0% | |
| AAACGGGACAGGGAATGCCG+AGG | + | tig0026773:29930-29949 | Msa1430920:CDS | 60.0% | |
| CGTGTAAGTCACGCGCGCTG+AGG | - | tig0026773:28510-28529 | Msa1430920:intergenic | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | + | tig0026773:28530-28549 | Msa1430920:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | + | tig0026773:28531-28550 | Msa1430920:CDS | 65.0% | |
| TGTTGTGGTTGCGGCGGTGG+TGG | - | tig0026773:28868-28887 | Msa1430920:intergenic | 65.0% | |
| !! | TGGTGTTGTGGTTGCGGCGG+TGG | - | tig0026773:28871-28890 | Msa1430920:intergenic | 65.0% |
| AGTCTACTGGGCCTAGGCCC+AGG | + | tig0026773:29111-29130 | Msa1430920:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | - | tig0026773:29137-29156 | Msa1430920:intergenic | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | + | tig0026773:29137-29156 | Msa1430920:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | + | tig0026773:29316-29335 | Msa1430920:CDS | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | + | tig0026773:29319-29338 | Msa1430920:CDS | 65.0% | |
| AAGCTCCGCGAACGCTGCAC+AGG | - | tig0026773:29512-29531 | Msa1430920:intergenic | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | + | tig0026773:29572-29591 | Msa1430920:CDS | 65.0% |
| CGTGTAAGTCACGCGCGCTG+AGG | - | tig0026773:28510-28529 | Msa1430920:intergenic | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | + | tig0026773:28530-28549 | Msa1430920:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | + | tig0026773:28531-28550 | Msa1430920:CDS | 65.0% | |
| TGTTGTGGTTGCGGCGGTGG+TGG | - | tig0026773:28868-28887 | Msa1430920:intergenic | 65.0% | |
| !! | TGGTGTTGTGGTTGCGGCGG+TGG | - | tig0026773:28871-28890 | Msa1430920:intergenic | 65.0% |
| AGTCTACTGGGCCTAGGCCC+AGG | + | tig0026773:29111-29130 | Msa1430920:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | - | tig0026773:29137-29156 | Msa1430920:intergenic | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | + | tig0026773:29137-29156 | Msa1430920:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | + | tig0026773:29316-29335 | Msa1430920:CDS | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | + | tig0026773:29319-29338 | Msa1430920:CDS | 65.0% | |
| AAGCTCCGCGAACGCTGCAC+AGG | - | tig0026773:29512-29531 | Msa1430920:intergenic | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | + | tig0026773:29572-29591 | Msa1430920:CDS | 65.0% |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | - | tig0026773:28865-28884 | Msa1430920:intergenic | 70.0% |
| TACTGGGCCTAGGCCCAGGC+CGG | + | tig0026773:29115-29134 | Msa1430920:CDS | 70.0% | |
| GGTAGTACGGGCACCACCGG+AGG | + | tig0026773:29282-29301 | Msa1430920:CDS | 70.0% | |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | - | tig0026773:28865-28884 | Msa1430920:intergenic | 70.0% |
| TACTGGGCCTAGGCCCAGGC+CGG | + | tig0026773:29115-29134 | Msa1430920:CDS | 70.0% | |
| GGTAGTACGGGCACCACCGG+AGG | + | tig0026773:29282-29301 | Msa1430920:CDS | 70.0% | |
| GCAGACTCCGGCCTGGGCCT+AGG | - | tig0026773:29125-29144 | Msa1430920:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | + | tig0026773:29125-29144 | Msa1430920:CDS | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | + | tig0026773:29126-29145 | Msa1430920:CDS | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | + | tig0026773:29127-29146 | Msa1430920:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | - | tig0026773:29131-29150 | Msa1430920:intergenic | 75.0% | |
| AGCCCCAGCAGACTCCGGCC+TGG | - | tig0026773:29132-29151 | Msa1430920:intergenic | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | + | tig0026773:29289-29308 | Msa1430920:CDS | 75.0% | |
| GCAGACTCCGGCCTGGGCCT+AGG | - | tig0026773:29125-29144 | Msa1430920:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | + | tig0026773:29125-29144 | Msa1430920:CDS | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | + | tig0026773:29126-29145 | Msa1430920:CDS | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | + | tig0026773:29127-29146 | Msa1430920:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | - | tig0026773:29131-29150 | Msa1430920:intergenic | 75.0% | |
| AGCCCCAGCAGACTCCGGCC+TGG | - | tig0026773:29132-29151 | Msa1430920:intergenic | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | + | tig0026773:29289-29308 | Msa1430920:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026773 | gene | 28451 | 30053 | 28451 | ID=Msa1430920;Name=Msa1430920 |
| tig0026773 | mRNA | 28451 | 30053 | 28451 | ID=Msa1430920-mRNA-1;Parent=Msa1430920;Name=Msa1430920-mRNA-1;_AED=0.15;_eAED=0.18;_QI=0|0|0|1|1|1|3|0|464 |
| tig0026773 | exon | 28451 | 28745 | 28451 | ID=Msa1430920-mRNA-1:exon:7299;Parent=Msa1430920-mRNA-1 |
| tig0026773 | exon | 28844 | 29170 | 28844 | ID=Msa1430920-mRNA-1:exon:7300;Parent=Msa1430920-mRNA-1 |
| tig0026773 | exon | 29281 | 30053 | 29281 | ID=Msa1430920-mRNA-1:exon:7301;Parent=Msa1430920-mRNA-1 |
| tig0026773 | CDS | 28451 | 28745 | 28451 | ID=Msa1430920-mRNA-1:cds;Parent=Msa1430920-mRNA-1 |
| tig0026773 | CDS | 28844 | 29170 | 28844 | ID=Msa1430920-mRNA-1:cds;Parent=Msa1430920-mRNA-1 |
| tig0026773 | CDS | 29281 | 30053 | 29281 | ID=Msa1430920-mRNA-1:cds;Parent=Msa1430920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
