Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0307770 | AES63513.2 | 85.607 | 535 | 38 | 3 | 1 | 497 | 1 | 534 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0307770 | 0.822102 | 2.834373e-53 | -8.615850e-47 |
| Msa0008110 | Msa0307770 | 0.826401 | 2.767653e-54 | -8.615850e-47 |
| Msa0028420 | Msa0307770 | 0.811668 | 6.238610e-51 | -8.615850e-47 |
| Msa0057420 | Msa0307770 | 0.808506 | 2.995844e-50 | -8.615850e-47 |
| Msa0090400 | Msa0307770 | 0.862985 | 3.437673e-64 | -8.615850e-47 |
| Msa0137880 | Msa0307770 | 0.855453 | 6.243908e-62 | -8.615850e-47 |
| Msa0149370 | Msa0307770 | 0.822337 | 2.500455e-53 | -8.615850e-47 |
| Msa0182240 | Msa0307770 | 0.809008 | 2.339292e-50 | -8.615850e-47 |
| Msa0190020 | Msa0307770 | 0.883933 | 2.947377e-71 | -8.615850e-47 |
| Msa0225460 | Msa0307770 | 0.832390 | 9.714137e-56 | -8.615850e-47 |
| Msa0225680 | Msa0307770 | 0.827995 | 1.149767e-54 | -8.615850e-47 |
| Msa0267110 | Msa0307770 | 0.858130 | 1.017676e-62 | -8.615850e-47 |
| Msa0272660 | Msa0307770 | 0.807337 | 5.311345e-50 | -8.615850e-47 |
| Msa0307770 | Msa0348880 | 0.804998 | 1.650661e-49 | -8.615850e-47 |
| Msa0307770 | Msa0379770 | 0.807492 | 4.923001e-50 | -8.615850e-47 |
| Msa0307770 | Msa0419700 | 0.821526 | 3.852695e-53 | -8.615850e-47 |
| Msa0307770 | Msa0428150 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0307770 | Msa0440500 | 0.810848 | 9.399496e-51 | -8.615850e-47 |
| Msa0307770 | Msa0442830 | 0.822030 | 2.945855e-53 | -8.615850e-47 |
| Msa0307770 | Msa0443310 | 0.810378 | 1.187681e-50 | -8.615850e-47 |
| Msa0307770 | Msa0462500 | 0.816809 | 4.565406e-52 | -8.615850e-47 |
| Msa0307770 | Msa0474520 | 0.817836 | 2.682052e-52 | -8.615850e-47 |
| Msa0307770 | Msa0511750 | 0.818918 | 1.525459e-52 | -8.615850e-47 |
| Msa0307770 | Msa0547900 | 0.808691 | 2.734818e-50 | -8.615850e-47 |
| Msa0307770 | Msa0548470 | 0.827746 | 1.319853e-54 | -8.615850e-47 |
| Msa0307770 | Msa0602880 | 0.800971 | 1.122218e-48 | -8.615850e-47 |
| Msa0307770 | Msa0626450 | 0.805515 | 1.286373e-49 | -8.615850e-47 |
| Msa0307770 | Msa0626490 | 0.801727 | 7.853771e-49 | -8.615850e-47 |
| Msa0307770 | Msa0644410 | 0.830272 | 3.224467e-55 | -8.615850e-47 |
| Msa0307770 | Msa0664600 | 0.802667 | 5.032080e-49 | -8.615850e-47 |
| Msa0307770 | Msa0689520 | 0.824748 | 6.823273e-54 | -8.615850e-47 |
| Msa0307770 | Msa0711970 | 0.805769 | 1.137539e-49 | -8.615850e-47 |
| Msa0307770 | Msa0754520 | 0.801767 | 7.709270e-49 | -8.615850e-47 |
| Msa0307770 | Msa0794810 | 0.801183 | 1.015219e-48 | -8.615850e-47 |
| Msa0307770 | Msa0833220 | 0.805415 | 1.349512e-49 | -8.615850e-47 |
| Msa0307770 | Msa0907910 | 0.950382 | 1.847120e-108 | -8.615850e-47 |
| Msa0307770 | Msa0945110 | 0.830488 | 2.854487e-55 | -8.615850e-47 |
| Msa0307770 | Msa1020560 | 0.809699 | 1.662833e-50 | -8.615850e-47 |
| Msa0307770 | Msa1097980 | 0.826713 | 2.332690e-54 | -8.615850e-47 |
| Msa0307770 | Msa1223470 | 0.853043 | 3.101681e-61 | -8.615850e-47 |
| Msa0307770 | Msa1240770 | 0.803146 | 4.007438e-49 | -8.615850e-47 |
| Msa0307770 | Msa1269480 | 0.857431 | 1.640313e-62 | -8.615850e-47 |
| Msa0307770 | Msa1321340 | 0.818592 | 1.809104e-52 | -8.615850e-47 |
| Msa0307770 | Msa1369550 | 0.838609 | 2.597175e-57 | -8.615850e-47 |
| Msa0307770 | Msa1396030 | 0.813622 | 2.331835e-51 | -8.615850e-47 |
| Msa0307770 | Msa1422420 | 0.830752 | 2.460837e-55 | -8.615850e-47 |
| Msa0307770 | Msa1430920 | 0.923687 | 1.910896e-89 | -8.615850e-47 |
| Msa0307770 | Msa1440960 | 0.800083 | 1.702348e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0307770 | MtrunA17_Chr2g0279591 | 85.607 | 535 | 38 | 3 | 1 | 497 | 1 | 534 | 0.0 | 743 |
| Msa0307770 | MtrunA17_Chr4g0049941 | 77.372 | 137 | 30 | 1 | 1 | 136 | 1 | 137 | 4.59e-68 | 226 |
| Msa0307770 | MtrunA17_Chr4g0049941 | 46.415 | 265 | 106 | 9 | 241 | 497 | 253 | 489 | 2.22e-50 | 179 |
| Msa0307770 | MtrunA17_Chr5g0427371 | 47.445 | 137 | 72 | 0 | 1 | 137 | 1 | 137 | 2.52e-36 | 137 |
| Msa0307770 | MtrunA17_Chr3g0132971 | 44.030 | 134 | 72 | 1 | 4 | 134 | 3 | 136 | 1.17e-30 | 119 |
| Msa0307770 | MtrunA17_Chr4g0066631 | 36.000 | 150 | 93 | 3 | 1 | 149 | 1 | 148 | 9.88e-18 | 86.7 |
| Msa0307770 | MtrunA17_Chr6g0476751 | 32.558 | 129 | 86 | 1 | 4 | 132 | 3 | 130 | 1.49e-17 | 85.9 |
| Msa0307770 | MtrunA17_Chr5g0447431 | 34.146 | 123 | 80 | 1 | 4 | 126 | 3 | 124 | 1.77e-16 | 82.4 |
| Msa0307770 | MtrunA17_Chr3g0132181 | 35.821 | 134 | 82 | 2 | 16 | 146 | 29 | 161 | 1.18e-15 | 80.1 |
| Msa0307770 | MtrunA17_Chr3g0126501 | 32.824 | 131 | 87 | 1 | 1 | 131 | 1 | 130 | 3.64e-15 | 78.6 |
| Msa0307770 | MtrunA17_Chr2g0286511 | 31.351 | 185 | 117 | 5 | 4 | 180 | 3 | 185 | 3.48e-14 | 75.5 |
| Msa0307770 | MtrunA17_Chr3g0120851 | 31.667 | 120 | 81 | 1 | 4 | 123 | 3 | 121 | 7.56e-13 | 70.9 |
| Msa0307770 | MtrunA17_Chr8g0367601 | 33.871 | 124 | 78 | 3 | 13 | 132 | 13 | 136 | 1.80e-11 | 64.7 |
| Msa0307770 | MtrunA17_Chr1g0178901 | 31.538 | 130 | 87 | 2 | 4 | 132 | 3 | 131 | 2.38e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0307770 | AT5G64360.5 | 34.980 | 506 | 251 | 16 | 8 | 495 | 17 | 462 | 5.98e-67 | 223 |
| Msa0307770 | AT5G64360.7 | 34.980 | 506 | 251 | 16 | 8 | 495 | 17 | 462 | 5.98e-67 | 223 |
| Msa0307770 | AT5G64360.6 | 34.980 | 506 | 251 | 16 | 8 | 495 | 17 | 462 | 5.98e-67 | 223 |
| Msa0307770 | AT5G64360.3 | 34.980 | 506 | 251 | 16 | 8 | 495 | 17 | 462 | 5.98e-67 | 223 |
| Msa0307770 | AT5G64360.2 | 34.980 | 506 | 251 | 16 | 8 | 495 | 17 | 462 | 5.98e-67 | 223 |
| Msa0307770 | AT5G64360.4 | 34.980 | 506 | 251 | 16 | 8 | 495 | 17 | 462 | 5.98e-67 | 223 |
| Msa0307770 | AT5G64360.1 | 32.932 | 498 | 230 | 14 | 8 | 495 | 17 | 420 | 7.86e-63 | 211 |
| Msa0307770 | AT5G09540.1 | 48.872 | 133 | 65 | 2 | 5 | 134 | 10 | 142 | 6.32e-34 | 129 |
| Msa0307770 | AT1G62970.1 | 48.485 | 132 | 63 | 2 | 8 | 134 | 17 | 148 | 4.46e-33 | 134 |
| Msa0307770 | AT2G01710.1 | 49.265 | 136 | 64 | 2 | 5 | 135 | 7 | 142 | 4.89e-32 | 125 |
| Msa0307770 | AT2G01710.2 | 49.265 | 136 | 64 | 2 | 5 | 135 | 51 | 186 | 3.59e-31 | 124 |
| Msa0307770 | AT5G37380.8 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT5G37380.4 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT5G37380.7 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT5G37380.2 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT5G37380.6 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT5G37380.1 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT5G37380.5 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT5G37380.3 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT5G37380.9 | 34.074 | 135 | 86 | 2 | 5 | 137 | 4 | 137 | 1.15e-17 | 85.5 |
| Msa0307770 | AT3G06340.2 | 32.450 | 151 | 100 | 2 | 5 | 154 | 4 | 153 | 6.08e-16 | 81.3 |
| Msa0307770 | AT3G06340.4 | 32.450 | 151 | 100 | 2 | 5 | 154 | 4 | 153 | 6.08e-16 | 81.3 |
| Msa0307770 | AT3G06340.3 | 32.450 | 151 | 100 | 2 | 5 | 154 | 4 | 153 | 6.08e-16 | 81.3 |
| Msa0307770 | AT3G06340.1 | 32.450 | 151 | 100 | 2 | 5 | 154 | 4 | 153 | 6.08e-16 | 81.3 |
| Msa0307770 | AT5G53150.5 | 31.200 | 125 | 85 | 1 | 5 | 129 | 4 | 127 | 7.87e-16 | 80.5 |
| Msa0307770 | AT4G19570.1 | 32.812 | 128 | 85 | 1 | 4 | 131 | 3 | 129 | 1.25e-15 | 80.1 |
| Msa0307770 | AT5G53150.3 | 31.200 | 125 | 85 | 1 | 5 | 129 | 4 | 127 | 1.26e-15 | 80.5 |
| Msa0307770 | AT5G53150.6 | 31.200 | 125 | 85 | 1 | 5 | 129 | 4 | 127 | 1.26e-15 | 80.5 |
| Msa0307770 | AT5G53150.2 | 31.200 | 125 | 85 | 1 | 5 | 129 | 4 | 127 | 1.26e-15 | 80.5 |
| Msa0307770 | AT5G53150.4 | 31.200 | 125 | 85 | 1 | 5 | 129 | 4 | 127 | 1.47e-15 | 80.1 |
| Msa0307770 | AT5G53150.1 | 31.200 | 125 | 85 | 1 | 5 | 129 | 4 | 127 | 1.47e-15 | 80.1 |
| Msa0307770 | AT2G05230.1 | 34.146 | 123 | 80 | 1 | 6 | 128 | 5 | 126 | 7.22e-15 | 77.8 |
| Msa0307770 | AT2G05250.1 | 34.146 | 123 | 80 | 1 | 6 | 128 | 5 | 126 | 7.22e-15 | 77.8 |
| Msa0307770 | AT2G25560.1 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 1.56e-14 | 76.6 |
| Msa0307770 | AT3G04980.2 | 34.127 | 126 | 82 | 1 | 4 | 129 | 3 | 127 | 2.96e-14 | 76.3 |
| Msa0307770 | AT3G04980.3 | 34.127 | 126 | 82 | 1 | 4 | 129 | 3 | 127 | 2.96e-14 | 76.3 |
| Msa0307770 | AT3G04980.1 | 35.455 | 110 | 70 | 1 | 20 | 129 | 1 | 109 | 2.30e-13 | 73.6 |
| Msa0307770 | AT4G19580.1 | 34.711 | 121 | 77 | 2 | 1 | 121 | 1 | 119 | 2.93e-13 | 71.2 |
| Msa0307770 | AT4G19590.3 | 32.812 | 128 | 84 | 2 | 5 | 131 | 4 | 130 | 1.87e-12 | 68.9 |
| Msa0307770 | AT4G19590.2 | 32.558 | 129 | 85 | 2 | 4 | 131 | 3 | 130 | 2.65e-12 | 68.9 |
| Msa0307770 | AT4G19590.1 | 32.479 | 117 | 77 | 2 | 16 | 131 | 4 | 119 | 4.66e-11 | 64.7 |
Find 172 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAGAGGTGCTGGAAATT+TGG | 0.194700 | 2_4:-910182 | Msa0307770:CDS |
| CTTATGAGGATTTGAGAAAA+TGG | 0.235667 | 2_4:+911214 | None:intergenic |
| AGGCCCAGGCCGGAGTCTGC+TGG | 0.259644 | 2_4:-910888 | Msa0307770:CDS |
| AAGAGAAGAAGAGGGGCTTT+TGG | 0.287237 | 2_4:-910400 | Msa0307770:CDS |
| CATTGGTTGACCTAGGGTTT+TGG | 0.291648 | 2_4:+910985 | None:intergenic |
| AGGAGAGGTGCTGGAAATTT+GGG | 0.299385 | 2_4:-910181 | Msa0307770:CDS |
| TCATGATCATAATAACTAAA+AGG | 0.301913 | 2_4:+910529 | None:intergenic |
| TGCTGGAAATTTGGGTAAGT+TGG | 0.320594 | 2_4:-910173 | Msa0307770:CDS |
| TCCTCATCAATCACCCTAAC+AGG | 0.328433 | 2_4:+910960 | None:intergenic |
| AAGCAAACGGGTTACGGTTC+GGG | 0.334461 | 2_4:+911276 | None:intergenic |
| TTCTTCTTCGCGCCATTCAT+AGG | 0.340125 | 2_4:+910565 | None:intergenic |
| GCAGACTCCGGCCTGGGCCT+AGG | 0.344007 | 2_4:+910891 | None:intergenic |
| CGCCCGTTCCTTCGCCATTC+GGG | 0.353379 | 2_4:-911483 | Msa0307770:CDS |
| GGTGGTTGTGGTTGCGGCGG+TGG | 0.354538 | 2_4:+911146 | None:intergenic |
| TGTGGATGTGGTGGTGGTGG+TGG | 0.359505 | 2_4:+911125 | None:intergenic |
| GGTCAACCAATGAACCTGTT+AGG | 0.359838 | 2_4:-910974 | Msa0307770:CDS |
| GCGCCCGTTCCTTCGCCATT+CGG | 0.370967 | 2_4:-911484 | Msa0307770:CDS |
| AGCCCCAGCAGACTCCGGCC+TGG | 0.373358 | 2_4:+910884 | None:intergenic |
| AATCACCCTAACAGGTTCAT+TGG | 0.383228 | 2_4:+910968 | None:intergenic |
| GGTGGTGGTGGTTGTGGTTG+CGG | 0.384861 | 2_4:+911140 | None:intergenic |
| TGCTGTGGATGTGGTGGTGG+TGG | 0.386613 | 2_4:+911122 | None:intergenic |
| GGCCCAGGCCGGAGTCTGCT+GGG | 0.387098 | 2_4:-910887 | Msa0307770:CDS |
| GCCCCAGCAGACTCCGGCCT+GGG | 0.390143 | 2_4:+910885 | None:intergenic |
| TCTCTCTTGTTCACGATGCT+TGG | 0.391599 | 2_4:-911238 | Msa0307770:CDS |
| GGTTGTGGTTGCGGCGGTGG+TGG | 0.399199 | 2_4:+911149 | None:intergenic |
| TGTGGTTGCGGCGGTGGTGG+TGG | 0.399655 | 2_4:+911152 | None:intergenic |
| TCATACAAAGCTTTCTTATG+AGG | 0.399685 | 2_4:+911200 | None:intergenic |
| TGCCCGAATGGCGAAGGAAC+GGG | 0.412075 | 2_4:+911481 | None:intergenic |
| TTCTGCTAGTGGAGTGAGAC+AGG | 0.412907 | 2_4:-910113 | Msa0307770:CDS |
| TCAACATTTGACACCATTGC+AGG | 0.413719 | 2_4:+910238 | None:intergenic |
| CAGGGGAACGTAAACGGGAC+AGG | 0.419825 | 2_4:-910094 | Msa0307770:CDS |
| TAAGCAAACGGGTTACGGTT+CGG | 0.421723 | 2_4:+911275 | None:intergenic |
| AGGATAATATTGAAGGGATT+GGG | 0.422331 | 2_4:-910063 | Msa0307770:CDS |
| AAATGCTGTGGTTGCGGTTG+TGG | 0.425742 | 2_4:+911068 | None:intergenic |
| CAGCATAAGCAAACGGGTTA+CGG | 0.426424 | 2_4:+911270 | None:intergenic |
| CCTACCCATCCTACTCCCTT+TGG | 0.432200 | 2_4:+910432 | None:intergenic |
| GGATATCAATGGGTCTTCTT+CGG | 0.433579 | 2_4:-910620 | Msa0307770:CDS |
| TTCTTTGATTCTAGCTTCAC+CGG | 0.434187 | 2_4:+911394 | None:intergenic |
| GTGAGACAGGGGAACGTAAA+CGG | 0.434508 | 2_4:-910100 | Msa0307770:CDS |
| TCTGCAACAACGTTAAGAAT+TGG | 0.437792 | 2_4:+910004 | None:intergenic |
| AGTTCAGTGGCTTCGAATCT+CGG | 0.439160 | 2_4:+911446 | None:intergenic |
| GGAGACCAATTGAGAGGCCT+AGG | 0.439545 | 2_4:-910354 | Msa0307770:CDS |
| GAGGATAATATTGAAGGGAT+TGG | 0.440885 | 2_4:-910064 | Msa0307770:CDS |
| GTTCAGTGGCTTCGAATCTC+GGG | 0.442981 | 2_4:+911447 | None:intergenic |
| CGGGCACCACCGGAGGTGAC+TGG | 0.443466 | 2_4:-910724 | Msa0307770:CDS |
| GAAGGAGGAAGAGAAGAAGA+GGG | 0.444043 | 2_4:-910408 | Msa0307770:CDS |
| AGTCTACTGGGCCTAGGCCC+AGG | 0.445027 | 2_4:-910902 | Msa0307770:CDS |
| TAAGAATTGGCAAGCTACTA+AGG | 0.450903 | 2_4:+910017 | None:intergenic |
| GTAGGATGGGTAGGAGAAGG+AGG | 0.454601 | 2_4:-910423 | Msa0307770:CDS |
| TGAGACAGGGGAACGTAAAC+GGG | 0.455156 | 2_4:-910099 | Msa0307770:CDS |
| CCCCTCCTAGGCCTCTCAAT+TGG | 0.455567 | 2_4:+910349 | None:intergenic |
| TTGTTTCATTGCCCTATGAA+TGG | 0.458076 | 2_4:-910577 | Msa0307770:CDS |
| GCATGAGCAGCATAAGCAAA+CGG | 0.469281 | 2_4:+911263 | None:intergenic |
| ACGGGTTACGGTTCGGGTCA+AGG | 0.470734 | 2_4:+911282 | None:intergenic |
| GTCAATGCTGATGAGTCTAC+TGG | 0.470766 | 2_4:-910915 | Msa0307770:CDS |
| GGAGTAGGATGGGTAGGAGA+AGG | 0.475139 | 2_4:-910426 | Msa0307770:CDS |
| AGTTTGACCGTCAGTTTCAC+CGG | 0.476193 | 2_4:+910857 | None:intergenic |
| GGTGATTGGCGGGGTACCAA+AGG | 0.477928 | 2_4:-910448 | Msa0307770:CDS |
| GGTGGTAAAGGAAATTGAAT+AGG | 0.479480 | 2_4:+911089 | None:intergenic |
| TGATACCTGTGCAGCGTTCG+CGG | 0.484855 | 2_4:-910509 | Msa0307770:CDS |
| CCGTCTTCTCCAGTCACCTC+CGG | 0.487601 | 2_4:+910715 | None:intergenic |
| ACGCGCGCTGAGGAGTTTGT+TGG | 0.488952 | 2_4:+911517 | None:intergenic |
| CATGAGCAGCATAAGCAAAC+GGG | 0.491884 | 2_4:+911264 | None:intergenic |
| GAGTCTGCTGGGGCTAAGCC+CGG | 0.494733 | 2_4:-910876 | Msa0307770:CDS |
| TGTTGCTGTGGATGTGGTGG+TGG | 0.498810 | 2_4:+911119 | None:intergenic |
| AGAAGGAGGAAGAGAAGAAG+AGG | 0.499015 | 2_4:-910409 | Msa0307770:CDS |
| CTGATGAGTCTACTGGGCCT+AGG | 0.503024 | 2_4:-910908 | Msa0307770:CDS |
| CAATTGAGAGGCCTAGGAGG+GGG | 0.504720 | 2_4:-910348 | Msa0307770:CDS |
| CGCGAAGAAGAATGCTCGGA+AGG | 0.506788 | 2_4:-910554 | Msa0307770:CDS |
| GGTTCGAGAAGGAGAGGTGC+TGG | 0.513952 | 2_4:-910190 | Msa0307770:CDS |
| TCTTCTTCGCGCCATTCATA+GGG | 0.514484 | 2_4:+910566 | None:intergenic |
| TACTGGGCCTAGGCCCAGGC+CGG | 0.518600 | 2_4:-910898 | Msa0307770:CDS |
| GACGGTGACGAGGGAGAGGT+TGG | 0.518695 | 2_4:-910697 | Msa0307770:CDS |
| CAGGTTCATTGGTTGACCTA+GGG | 0.520104 | 2_4:+910979 | None:intergenic |
| TGCGGTTGTTGCTGTGGATG+TGG | 0.520536 | 2_4:+911113 | None:intergenic |
| AAGCTCCGCGAACGCTGCAC+AGG | 0.521459 | 2_4:+910504 | None:intergenic |
| GTCGGATTCTTGTGCCCGAA+TGG | 0.522206 | 2_4:+911469 | None:intergenic |
| GTCAACCAATGAACCTGTTA+GGG | 0.524013 | 2_4:-910973 | Msa0307770:CDS |
| GGCTTAGCCCCAGCAGACTC+CGG | 0.527248 | 2_4:+910879 | None:intergenic |
| ATGATAGCAGTGATGGTGAT+TGG | 0.532126 | 2_4:-910462 | Msa0307770:CDS |
| AGTGGTAGTACGGGCACCAC+CGG | 0.535051 | 2_4:-910734 | Msa0307770:CDS |
| GTGATTGGCGGGGTACCAAA+GGG | 0.538758 | 2_4:-910447 | Msa0307770:CDS |
| TGCTACTTCTGTGCCTGCAA+TGG | 0.539629 | 2_4:-910251 | Msa0307770:CDS |
| GTGGAAGAAGCTTCTGCTAG+TGG | 0.544361 | 2_4:-910124 | Msa0307770:CDS |
| AAAGGAAATTGAATAGGTTG+CGG | 0.545323 | 2_4:+911095 | None:intergenic |
| GGTAAGAAGGCTGTGGTGGG+TGG | 0.548348 | 2_4:-910211 | Msa0307770:CDS |
| ATAGCGAAGGATTTGAAGAA+TGG | 0.549445 | 2_4:+911355 | None:intergenic |
| AAATTCCCACTAAACCCTAA+AGG | 0.552901 | 2_4:+910646 | None:intergenic |
| CGTGTAAGTCACGCGCGCTG+AGG | 0.553465 | 2_4:+911507 | None:intergenic |
| GACCAATTGAGAGGCCTAGG+AGG | 0.554781 | 2_4:-910351 | Msa0307770:CDS |
| ACAGGTTCATTGGTTGACCT+AGG | 0.556407 | 2_4:+910978 | None:intergenic |
| AATGCCGAGGATAATATTGA+AGG | 0.557483 | 2_4:-910070 | Msa0307770:CDS |
| TTCTTGTGCCCGAATGGCGA+AGG | 0.557741 | 2_4:+911475 | None:intergenic |
| ACCAATTGAGAGGCCTAGGA+GGG | 0.558221 | 2_4:-910350 | Msa0307770:CDS |
| TAGCAGTGATGGTGATTGGC+GGG | 0.559217 | 2_4:-910458 | Msa0307770:CDS |
| CGAAGAAGAATGCTCGGAAG+GGG | 0.559633 | 2_4:-910552 | Msa0307770:CDS |
| TGCAAGACGGCGATATTGAT+CGG | 0.559726 | 2_4:+911310 | None:intergenic |
| TTGATGAGGAACAAAACAAT+GGG | 0.559786 | 2_4:-910947 | Msa0307770:CDS |
| GCGAAGAAGAATGCTCGGAA+GGG | 0.560744 | 2_4:-910553 | Msa0307770:CDS |
| AGAAGACGGTGACGAGGGAG+AGG | 0.562730 | 2_4:-910701 | Msa0307770:CDS |
| TCAATGGGTCTTCTTCGGAA+TGG | 0.566181 | 2_4:-910615 | Msa0307770:CDS |
| GGTGACGAGGGAGAGGTTGG+TGG | 0.566487 | 2_4:-910694 | Msa0307770:CDS |
| GCCCAGGCCGGAGTCTGCTG+GGG | 0.569311 | 2_4:-910886 | Msa0307770:CDS |
| AGGGGAACGTAAACGGGACA+GGG | 0.570152 | 2_4:-910093 | Msa0307770:CDS |
| CAATGAAACAAAGCAGACAT+AGG | 0.570623 | 2_4:+910589 | None:intergenic |
| GTGCCCGAATGGCGAAGGAA+CGG | 0.570710 | 2_4:+911480 | None:intergenic |
| AGCTGGTAAGAAGGCTGTGG+TGG | 0.571053 | 2_4:-910215 | Msa0307770:CDS |
| GTGGTGGTGCTGATGTTGAA+AGG | 0.573169 | 2_4:-910375 | Msa0307770:CDS |
| GGTTGCGGTTGTGGTGGTAA+AGG | 0.574236 | 2_4:+911077 | None:intergenic |
| TGCTGTGGTTGCGGTTGTGG+TGG | 0.579718 | 2_4:+911071 | None:intergenic |
| GAGAATGACAATGGTGGTGG+TGG | 0.580037 | 2_4:-910304 | Msa0307770:CDS |
| AATCCCTTCAATATTATCCT+CGG | 0.583636 | 2_4:+910066 | None:intergenic |
| GGATGAAAATGCTGTGGTTG+CGG | 0.583652 | 2_4:+911062 | None:intergenic |
| GACTGGAGAAGACGGTGACG+AGG | 0.583753 | 2_4:-910707 | Msa0307770:CDS |
| CCAAAGGGAGTAGGATGGGT+AGG | 0.584383 | 2_4:-910432 | Msa0307770:CDS |
| GGTGGTGGTTGTGGTTGCGG+CGG | 0.586913 | 2_4:+911143 | None:intergenic |
| TAACGTTGTTGCAGATGACA+AGG | 0.586965 | 2_4:-909996 | Msa0307770:CDS |
| CTGTGGTGGGTGGTTCGAGA+AGG | 0.587944 | 2_4:-910201 | Msa0307770:CDS |
| GGTACCAAAGGGAGTAGGAT+GGG | 0.588927 | 2_4:-910436 | Msa0307770:CDS |
| AAATGTTGAAGCTGGTAAGA+AGG | 0.589973 | 2_4:-910224 | Msa0307770:CDS |
| AAGGAGGAAGAGAAGAAGAG+GGG | 0.592224 | 2_4:-910407 | Msa0307770:CDS |
| ATGCCGAGGATAATATTGAA+GGG | 0.593077 | 2_4:-910069 | Msa0307770:CDS |
| CCGGAGGTGACTGGAGAAGA+CGG | 0.593141 | 2_4:-910715 | Msa0307770:CDS |
| ATAGGTTGCGGTTGTTGCTG+TGG | 0.593211 | 2_4:+911107 | None:intergenic |
| GGGTAAGTTGGATTTGAATG+TGG | 0.594650 | 2_4:-910161 | Msa0307770:CDS |
| ATTGATGAGGAACAAAACAA+TGG | 0.595375 | 2_4:-910948 | Msa0307770:CDS |
| AGCCACTGAACTTCTTCTTG+CGG | 0.598213 | 2_4:-911435 | Msa0307770:CDS |
| TCTGCTAGTGGAGTGAGACA+GGG | 0.598631 | 2_4:-910112 | Msa0307770:CDS |
| GGGTACCAAAGGGAGTAGGA+TGG | 0.600804 | 2_4:-910437 | Msa0307770:CDS |
| CCAATTGAGAGGCCTAGGAG+GGG | 0.606765 | 2_4:-910349 | Msa0307770:CDS |
| TCATCAGCATTGACATGACT+CGG | 0.609293 | 2_4:+910924 | None:intergenic |
| CTCAGCGCGCGTGACTTACA+CGG | 0.610260 | 2_4:-911506 | Msa0307770:CDS |
| AATTGAGAGGCCTAGGAGGG+GGG | 0.610392 | 2_4:-910347 | Msa0307770:CDS |
| TTGACTTGAACAGAAGGAGG+AGG | 0.615506 | 2_4:+911041 | None:intergenic |
| CAATATTCTGAGTATAGCGA+AGG | 0.617357 | 2_4:+911342 | None:intergenic |
| TTGTCGTTGACTTGAACAGA+AGG | 0.617497 | 2_4:+911035 | None:intergenic |
| ATGGTGTCAAATGTTGAAGC+TGG | 0.617929 | 2_4:-910232 | Msa0307770:CDS |
| GTTTGACCGTCAGTTTCACC+GGG | 0.617980 | 2_4:+910858 | None:intergenic |
| GCTAAGCCCGGTGAAACTGA+CGG | 0.618764 | 2_4:-910864 | Msa0307770:intron |
| TCGTTGACTTGAACAGAAGG+AGG | 0.624401 | 2_4:+911038 | None:intergenic |
| GGCGGGGTACCAAAGGGAGT+AGG | 0.631128 | 2_4:-910441 | Msa0307770:CDS |
| GTTATCGACACTCTCTTAGC+CGG | 0.631145 | 2_4:-911413 | Msa0307770:CDS |
| TGACAATGTGGTTGATGATG+AGG | 0.631213 | 2_4:-910281 | Msa0307770:CDS |
| TCAATGCTGATGAGTCTACT+GGG | 0.631414 | 2_4:-910914 | Msa0307770:CDS |
| GCTGGTAAGAAGGCTGTGGT+GGG | 0.632182 | 2_4:-910214 | Msa0307770:CDS |
| TCTTCTCCAGTCACCTCCGG+TGG | 0.632382 | 2_4:+910718 | None:intergenic |
| TGAATGGATGGAAGCAACAG+AGG | 0.633889 | 2_4:-911566 | Msa0307770:CDS |
| GTGGGTGGTTCGAGAAGGAG+AGG | 0.634386 | 2_4:-910196 | Msa0307770:CDS |
| AGTGGCTTCGAATCTCGGGT+CGG | 0.636739 | 2_4:+911451 | None:intergenic |
| ATGGCGCGAAGAAGAATGCT+CGG | 0.638976 | 2_4:-910558 | Msa0307770:CDS |
| GGTAGTACGGGCACCACCGG+AGG | 0.640935 | 2_4:-910731 | Msa0307770:CDS |
| ATAGCAGTGATGGTGATTGG+CGG | 0.641839 | 2_4:-910459 | Msa0307770:CDS |
| TTGAAAGGAGACCAATTGAG+AGG | 0.647944 | 2_4:-910360 | Msa0307770:CDS |
| GATGATGATGATAGCAGTGA+TGG | 0.649786 | 2_4:-910469 | Msa0307770:CDS |
| GCTGAGAATGACAATGGTGG+TGG | 0.654227 | 2_4:-910307 | Msa0307770:CDS |
| CTGCTAGTGGAGTGAGACAG+GGG | 0.659459 | 2_4:-910111 | Msa0307770:CDS |
| GGTCAAGGAGGATTGCAAGA+CGG | 0.660142 | 2_4:+911297 | None:intergenic |
| ACTGGAGAAGACGGTGACGA+GGG | 0.666817 | 2_4:-910706 | Msa0307770:CDS |
| TGTGGAGTTCAGCAATGAGG+TGG | 0.670708 | 2_4:-910143 | Msa0307770:CDS |
| AACCGCAAGAAGAAGTTCAG+TGG | 0.670841 | 2_4:+911433 | None:intergenic |
| GGTTGTTGCTGTGGATGTGG+TGG | 0.676015 | 2_4:+911116 | None:intergenic |
| GGTTACGGTTCGGGTCAAGG+AGG | 0.679710 | 2_4:+911285 | None:intergenic |
| TGAAGCTGGTAAGAAGGCTG+TGG | 0.683764 | 2_4:-910218 | Msa0307770:CDS |
| GGAGGAGGATGAAAATGCTG+TGG | 0.684139 | 2_4:+911056 | None:intergenic |
| AGCAGTGATGGTGATTGGCG+GGG | 0.685255 | 2_4:-910457 | Msa0307770:CDS |
| ACAGAGGTGAAGCTGAACGA+TGG | 0.691288 | 2_4:-911550 | Msa0307770:CDS |
| TGGTGGTGGTGGTGACAATG+TGG | 0.696568 | 2_4:-910293 | Msa0307770:CDS |
| ACCTGTTAGGGTGATTGATG+AGG | 0.704254 | 2_4:-910961 | Msa0307770:CDS |
| GGTAATGCTGAGAATGACAA+TGG | 0.707753 | 2_4:-910313 | Msa0307770:CDS |
| GAATGTGGAGTTCAGCAATG+AGG | 0.710179 | 2_4:-910146 | Msa0307770:CDS |
| AAACGGGACAGGGAATGCCG+AGG | 0.720567 | 2_4:-910083 | Msa0307770:CDS |
| AATGCTGAGAATGACAATGG+TGG | 0.774129 | 2_4:-910310 | Msa0307770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATGATCATAATAACTAAA+AGG | + | chr2_4:911019-911038 | None:intergenic | 20.0% |
| !! | TCATGATCATAATAACTAAA+AGG | + | chr2_4:911019-911038 | None:intergenic | 20.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | - | chr2_4:910915-910934 | Msa0307770:CDS | 25.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | - | chr2_4:910915-910934 | Msa0307770:CDS | 25.0% |
| CTTATGAGGATTTGAGAAAA+TGG | + | chr2_4:910334-910353 | None:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | + | chr2_4:910348-910367 | None:intergenic | 30.0% | |
| AAAGGAAATTGAATAGGTTG+CGG | + | chr2_4:910453-910472 | None:intergenic | 30.0% | |
| ATTGATGAGGAACAAAACAA+TGG | - | chr2_4:910597-910616 | Msa0307770:CDS | 30.0% | |
| TTGATGAGGAACAAAACAAT+GGG | - | chr2_4:910598-910617 | Msa0307770:CDS | 30.0% | |
| TGTGCAATCAAATAAACCTT+AGG | + | chr2_4:910756-910775 | None:intergenic | 30.0% | |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | - | chr2_4:910894-910913 | Msa0307770:CDS | 30.0% |
| !! | GGGAATTTTAAGGATATCAA+TGG | - | chr2_4:910914-910933 | Msa0307770:CDS | 30.0% |
| AATCCCTTCAATATTATCCT+CGG | + | chr2_4:911482-911501 | None:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | - | chr2_4:911482-911501 | Msa0307770:CDS | 30.0% | |
| CTTATGAGGATTTGAGAAAA+TGG | + | chr2_4:910334-910353 | None:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | + | chr2_4:910348-910367 | None:intergenic | 30.0% | |
| AAAGGAAATTGAATAGGTTG+CGG | + | chr2_4:910453-910472 | None:intergenic | 30.0% | |
| ATTGATGAGGAACAAAACAA+TGG | - | chr2_4:910597-910616 | Msa0307770:CDS | 30.0% | |
| TTGATGAGGAACAAAACAAT+GGG | - | chr2_4:910598-910617 | Msa0307770:CDS | 30.0% | |
| TGTGCAATCAAATAAACCTT+AGG | + | chr2_4:910756-910775 | None:intergenic | 30.0% | |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | - | chr2_4:910894-910913 | Msa0307770:CDS | 30.0% |
| !! | GGGAATTTTAAGGATATCAA+TGG | - | chr2_4:910914-910933 | Msa0307770:CDS | 30.0% |
| AATCCCTTCAATATTATCCT+CGG | + | chr2_4:911482-911501 | None:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | - | chr2_4:911482-911501 | Msa0307770:CDS | 30.0% | |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | + | chr2_4:910154-910173 | None:intergenic | 35.0% |
| ATAGCGAAGGATTTGAAGAA+TGG | + | chr2_4:910193-910212 | None:intergenic | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | + | chr2_4:910206-910225 | None:intergenic | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | + | chr2_4:910459-910478 | None:intergenic | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | - | chr2_4:910550-910569 | Msa0307770:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | + | chr2_4:910729-910748 | None:intergenic | 35.0% | |
| GTTTATTTGATTGCACACTC+CGG | - | chr2_4:910759-910778 | Msa0307770:intron | 35.0% | |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | - | chr2_4:910870-910889 | Msa0307770:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | - | chr2_4:910893-910912 | Msa0307770:CDS | 35.0% |
| AAATTCCCACTAAACCCTAA+AGG | + | chr2_4:910902-910921 | None:intergenic | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | - | chr2_4:910904-910923 | Msa0307770:CDS | 35.0% |
| CAATGAAACAAAGCAGACAT+AGG | + | chr2_4:910959-910978 | None:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | - | chr2_4:910968-910987 | Msa0307770:CDS | 35.0% | |
| AAATGTTGAAGCTGGTAAGA+AGG | - | chr2_4:911321-911340 | Msa0307770:CDS | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | - | chr2_4:911475-911494 | Msa0307770:CDS | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | - | chr2_4:911476-911495 | Msa0307770:CDS | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | - | chr2_4:911481-911500 | Msa0307770:CDS | 35.0% | |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | - | chr2_4:911494-911513 | Msa0307770:CDS | 35.0% |
| TAAGAATTGGCAAGCTACTA+AGG | + | chr2_4:911531-911550 | None:intergenic | 35.0% | |
| TCTGCAACAACGTTAAGAAT+TGG | + | chr2_4:911544-911563 | None:intergenic | 35.0% | |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | + | chr2_4:910154-910173 | None:intergenic | 35.0% |
| ATAGCGAAGGATTTGAAGAA+TGG | + | chr2_4:910193-910212 | None:intergenic | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | + | chr2_4:910206-910225 | None:intergenic | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | + | chr2_4:910459-910478 | None:intergenic | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | - | chr2_4:910550-910569 | Msa0307770:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | + | chr2_4:910729-910748 | None:intergenic | 35.0% | |
| GTTTATTTGATTGCACACTC+CGG | - | chr2_4:910759-910778 | Msa0307770:intron | 35.0% | |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | - | chr2_4:910870-910889 | Msa0307770:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | - | chr2_4:910893-910912 | Msa0307770:CDS | 35.0% |
| AAATTCCCACTAAACCCTAA+AGG | + | chr2_4:910902-910921 | None:intergenic | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | - | chr2_4:910904-910923 | Msa0307770:CDS | 35.0% |
| CAATGAAACAAAGCAGACAT+AGG | + | chr2_4:910959-910978 | None:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | - | chr2_4:910968-910987 | Msa0307770:CDS | 35.0% | |
| AAATGTTGAAGCTGGTAAGA+AGG | - | chr2_4:911321-911340 | Msa0307770:CDS | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | - | chr2_4:911475-911494 | Msa0307770:CDS | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | - | chr2_4:911476-911495 | Msa0307770:CDS | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | - | chr2_4:911481-911500 | Msa0307770:CDS | 35.0% | |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | - | chr2_4:911494-911513 | Msa0307770:CDS | 35.0% |
| TAAGAATTGGCAAGCTACTA+AGG | + | chr2_4:911531-911550 | None:intergenic | 35.0% | |
| TCTGCAACAACGTTAAGAAT+TGG | + | chr2_4:911544-911563 | None:intergenic | 35.0% | |
| !! | TTGTCGTTGACTTGAACAGA+AGG | + | chr2_4:910513-910532 | None:intergenic | 40.0% |
| GTCAACCAATGAACCTGTTA+GGG | - | chr2_4:910572-910591 | Msa0307770:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | + | chr2_4:910580-910599 | None:intergenic | 40.0% | |
| !! | TCATCAGCATTGACATGACT+CGG | + | chr2_4:910624-910643 | None:intergenic | 40.0% |
| TCAATGCTGATGAGTCTACT+GGG | - | chr2_4:910631-910650 | Msa0307770:CDS | 40.0% | |
| AAACTGACGGTCAAACTTTC+TGG | - | chr2_4:910694-910713 | Msa0307770:CDS | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | - | chr2_4:910737-910756 | Msa0307770:intron | 40.0% | |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | - | chr2_4:910801-910820 | Msa0307770:intron | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | - | chr2_4:910802-910821 | Msa0307770:intron | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | - | chr2_4:910869-910888 | Msa0307770:CDS | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | - | chr2_4:910884-910903 | Msa0307770:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | - | chr2_4:910885-910904 | Msa0307770:CDS | 40.0% |
| GGATATCAATGGGTCTTCTT+CGG | - | chr2_4:910925-910944 | Msa0307770:CDS | 40.0% | |
| ! | GATGATGATGATAGCAGTGA+TGG | - | chr2_4:911076-911095 | Msa0307770:CDS | 40.0% |
| ! | ATGATAGCAGTGATGGTGAT+TGG | - | chr2_4:911083-911102 | Msa0307770:CDS | 40.0% |
| TTGAAAGGAGACCAATTGAG+AGG | - | chr2_4:911185-911204 | Msa0307770:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | - | chr2_4:911232-911251 | Msa0307770:CDS | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | - | chr2_4:911235-911254 | Msa0307770:CDS | 40.0% | |
| !! | TGACAATGTGGTTGATGATG+AGG | - | chr2_4:911264-911283 | Msa0307770:CDS | 40.0% |
| TCAACATTTGACACCATTGC+AGG | + | chr2_4:911310-911329 | None:intergenic | 40.0% | |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | - | chr2_4:911313-911332 | Msa0307770:CDS | 40.0% |
| TGCTGGAAATTTGGGTAAGT+TGG | - | chr2_4:911372-911391 | Msa0307770:CDS | 40.0% | |
| ! | GGGTAAGTTGGATTTGAATG+TGG | - | chr2_4:911384-911403 | Msa0307770:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | - | chr2_4:911493-911512 | Msa0307770:CDS | 40.0% |
| TAACGTTGTTGCAGATGACA+AGG | - | chr2_4:911549-911568 | Msa0307770:CDS | 40.0% | |
| !! | TTGTCGTTGACTTGAACAGA+AGG | + | chr2_4:910513-910532 | None:intergenic | 40.0% |
| GTCAACCAATGAACCTGTTA+GGG | - | chr2_4:910572-910591 | Msa0307770:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | + | chr2_4:910580-910599 | None:intergenic | 40.0% | |
| !! | TCATCAGCATTGACATGACT+CGG | + | chr2_4:910624-910643 | None:intergenic | 40.0% |
| TCAATGCTGATGAGTCTACT+GGG | - | chr2_4:910631-910650 | Msa0307770:CDS | 40.0% | |
| AAACTGACGGTCAAACTTTC+TGG | - | chr2_4:910694-910713 | Msa0307770:CDS | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | - | chr2_4:910737-910756 | Msa0307770:intron | 40.0% | |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | - | chr2_4:910801-910820 | Msa0307770:intron | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | - | chr2_4:910802-910821 | Msa0307770:intron | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | - | chr2_4:910869-910888 | Msa0307770:CDS | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | - | chr2_4:910884-910903 | Msa0307770:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | - | chr2_4:910885-910904 | Msa0307770:CDS | 40.0% |
| GGATATCAATGGGTCTTCTT+CGG | - | chr2_4:910925-910944 | Msa0307770:CDS | 40.0% | |
| ! | GATGATGATGATAGCAGTGA+TGG | - | chr2_4:911076-911095 | Msa0307770:CDS | 40.0% |
| ! | ATGATAGCAGTGATGGTGAT+TGG | - | chr2_4:911083-911102 | Msa0307770:CDS | 40.0% |
| TTGAAAGGAGACCAATTGAG+AGG | - | chr2_4:911185-911204 | Msa0307770:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | - | chr2_4:911232-911251 | Msa0307770:CDS | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | - | chr2_4:911235-911254 | Msa0307770:CDS | 40.0% | |
| !! | TGACAATGTGGTTGATGATG+AGG | - | chr2_4:911264-911283 | Msa0307770:CDS | 40.0% |
| TCAACATTTGACACCATTGC+AGG | + | chr2_4:911310-911329 | None:intergenic | 40.0% | |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | - | chr2_4:911313-911332 | Msa0307770:CDS | 40.0% |
| TGCTGGAAATTTGGGTAAGT+TGG | - | chr2_4:911372-911391 | Msa0307770:CDS | 40.0% | |
| ! | GGGTAAGTTGGATTTGAATG+TGG | - | chr2_4:911384-911403 | Msa0307770:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | - | chr2_4:911493-911512 | Msa0307770:CDS | 40.0% |
| TAACGTTGTTGCAGATGACA+AGG | - | chr2_4:911549-911568 | Msa0307770:CDS | 40.0% | |
| AGTTCAGTGGCTTCGAATCT+CGG | + | chr2_4:910102-910121 | None:intergenic | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | - | chr2_4:910110-910129 | Msa0307770:CDS | 45.0% | |
| AACCGCAAGAAGAAGTTCAG+TGG | + | chr2_4:910115-910134 | None:intergenic | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | - | chr2_4:910132-910151 | Msa0307770:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | + | chr2_4:910238-910257 | None:intergenic | 45.0% | |
| !! | TAAGCAAACGGGTTACGGTT+CGG | + | chr2_4:910273-910292 | None:intergenic | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | + | chr2_4:910278-910297 | None:intergenic | 45.0% |
| CATGAGCAGCATAAGCAAAC+GGG | + | chr2_4:910284-910303 | None:intergenic | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | + | chr2_4:910285-910304 | None:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | - | chr2_4:910307-910326 | Msa0307770:CDS | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | + | chr2_4:910486-910505 | None:intergenic | 45.0% | |
| ! | TTGACTTGAACAGAAGGAGG+AGG | + | chr2_4:910507-910526 | None:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | + | chr2_4:910510-910529 | None:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | + | chr2_4:910563-910582 | None:intergenic | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | + | chr2_4:910569-910588 | None:intergenic | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | + | chr2_4:910570-910589 | None:intergenic | 45.0% |
| GGTCAACCAATGAACCTGTT+AGG | - | chr2_4:910571-910590 | Msa0307770:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | - | chr2_4:910584-910603 | Msa0307770:CDS | 45.0% | |
| TCCTCATCAATCACCCTAAC+AGG | + | chr2_4:910588-910607 | None:intergenic | 45.0% | |
| GTCAATGCTGATGAGTCTAC+TGG | - | chr2_4:910630-910649 | Msa0307770:CDS | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | + | chr2_4:910691-910710 | None:intergenic | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | - | chr2_4:910698-910717 | Msa0307770:CDS | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | + | chr2_4:910724-910743 | None:intergenic | 45.0% | |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | - | chr2_4:910777-910796 | Msa0307770:intron | 45.0% |
| CCCTCTTACAATTCTGACAC+CGG | + | chr2_4:910781-910800 | None:intergenic | 45.0% | |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | - | chr2_4:910778-910797 | Msa0307770:intron | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | - | chr2_4:910779-910798 | Msa0307770:intron | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | - | chr2_4:910793-910812 | Msa0307770:intron | 45.0% |
| TCAATGGGTCTTCTTCGGAA+TGG | - | chr2_4:910930-910949 | Msa0307770:CDS | 45.0% | |
| TCTTCTTCGCGCCATTCATA+GGG | + | chr2_4:910982-911001 | None:intergenic | 45.0% | |
| TTCTTCTTCGCGCCATTCAT+AGG | + | chr2_4:910983-911002 | None:intergenic | 45.0% | |
| ! | ATAGCAGTGATGGTGATTGG+CGG | - | chr2_4:911086-911105 | Msa0307770:CDS | 45.0% |
| AGAAGGAGGAAGAGAAGAAG+AGG | - | chr2_4:911136-911155 | Msa0307770:CDS | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | - | chr2_4:911137-911156 | Msa0307770:CDS | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | - | chr2_4:911138-911157 | Msa0307770:CDS | 45.0% | |
| ! | AAGAGAAGAAGAGGGGCTTT+TGG | - | chr2_4:911145-911164 | Msa0307770:CDS | 45.0% |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | - | chr2_4:911363-911382 | Msa0307770:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | - | chr2_4:911364-911383 | Msa0307770:CDS | 45.0% |
| GAATGTGGAGTTCAGCAATG+AGG | - | chr2_4:911399-911418 | Msa0307770:CDS | 45.0% | |
| AGTTCAGTGGCTTCGAATCT+CGG | + | chr2_4:910102-910121 | None:intergenic | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | - | chr2_4:910110-910129 | Msa0307770:CDS | 45.0% | |
| AACCGCAAGAAGAAGTTCAG+TGG | + | chr2_4:910115-910134 | None:intergenic | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | - | chr2_4:910132-910151 | Msa0307770:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | + | chr2_4:910238-910257 | None:intergenic | 45.0% | |
| !! | TAAGCAAACGGGTTACGGTT+CGG | + | chr2_4:910273-910292 | None:intergenic | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | + | chr2_4:910278-910297 | None:intergenic | 45.0% |
| CATGAGCAGCATAAGCAAAC+GGG | + | chr2_4:910284-910303 | None:intergenic | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | + | chr2_4:910285-910304 | None:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | - | chr2_4:910307-910326 | Msa0307770:CDS | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | + | chr2_4:910486-910505 | None:intergenic | 45.0% | |
| ! | TTGACTTGAACAGAAGGAGG+AGG | + | chr2_4:910507-910526 | None:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | + | chr2_4:910510-910529 | None:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | + | chr2_4:910563-910582 | None:intergenic | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | + | chr2_4:910569-910588 | None:intergenic | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | + | chr2_4:910570-910589 | None:intergenic | 45.0% |
| GGTCAACCAATGAACCTGTT+AGG | - | chr2_4:910571-910590 | Msa0307770:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | - | chr2_4:910584-910603 | Msa0307770:CDS | 45.0% | |
| TCCTCATCAATCACCCTAAC+AGG | + | chr2_4:910588-910607 | None:intergenic | 45.0% | |
| GTCAATGCTGATGAGTCTAC+TGG | - | chr2_4:910630-910649 | Msa0307770:CDS | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | + | chr2_4:910691-910710 | None:intergenic | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | - | chr2_4:910698-910717 | Msa0307770:CDS | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | + | chr2_4:910724-910743 | None:intergenic | 45.0% | |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | - | chr2_4:910777-910796 | Msa0307770:intron | 45.0% |
| CCCTCTTACAATTCTGACAC+CGG | + | chr2_4:910781-910800 | None:intergenic | 45.0% | |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | - | chr2_4:910778-910797 | Msa0307770:intron | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | - | chr2_4:910779-910798 | Msa0307770:intron | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | - | chr2_4:910793-910812 | Msa0307770:intron | 45.0% |
| TCAATGGGTCTTCTTCGGAA+TGG | - | chr2_4:910930-910949 | Msa0307770:CDS | 45.0% | |
| TCTTCTTCGCGCCATTCATA+GGG | + | chr2_4:910982-911001 | None:intergenic | 45.0% | |
| TTCTTCTTCGCGCCATTCAT+AGG | + | chr2_4:910983-911002 | None:intergenic | 45.0% | |
| ! | ATAGCAGTGATGGTGATTGG+CGG | - | chr2_4:911086-911105 | Msa0307770:CDS | 45.0% |
| AGAAGGAGGAAGAGAAGAAG+AGG | - | chr2_4:911136-911155 | Msa0307770:CDS | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | - | chr2_4:911137-911156 | Msa0307770:CDS | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | - | chr2_4:911138-911157 | Msa0307770:CDS | 45.0% | |
| ! | AAGAGAAGAAGAGGGGCTTT+TGG | - | chr2_4:911145-911164 | Msa0307770:CDS | 45.0% |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | - | chr2_4:911363-911382 | Msa0307770:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | - | chr2_4:911364-911383 | Msa0307770:CDS | 45.0% |
| GAATGTGGAGTTCAGCAATG+AGG | - | chr2_4:911399-911418 | Msa0307770:CDS | 45.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | - | chr2_4:909995-910014 | Msa0307770:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | + | chr2_4:910101-910120 | None:intergenic | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | + | chr2_4:910251-910270 | None:intergenic | 50.0% | |
| !! | AAGCAAACGGGTTACGGTTC+GGG | + | chr2_4:910272-910291 | None:intergenic | 50.0% |
| ATAGGTTGCGGTTGTTGCTG+TGG | + | chr2_4:910441-910460 | None:intergenic | 50.0% | |
| AAATGCTGTGGTTGCGGTTG+TGG | + | chr2_4:910480-910499 | None:intergenic | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | + | chr2_4:910492-910511 | None:intergenic | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | + | chr2_4:910690-910709 | None:intergenic | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | - | chr2_4:910717-910736 | Msa0307770:CDS | 50.0% | |
| ATGGCGCGAAGAAGAATGCT+CGG | - | chr2_4:910987-911006 | Msa0307770:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | - | chr2_4:910992-911011 | Msa0307770:CDS | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | - | chr2_4:910993-911012 | Msa0307770:CDS | 50.0% | |
| ! | TAGCAGTGATGGTGATTGGC+GGG | - | chr2_4:911087-911106 | Msa0307770:CDS | 50.0% |
| GGTACCAAAGGGAGTAGGAT+GGG | - | chr2_4:911109-911128 | Msa0307770:CDS | 50.0% | |
| ! | AGAAGAAGAGGGGCTTTTGG+TGG | - | chr2_4:911148-911167 | Msa0307770:CDS | 50.0% |
| !! | GTGGTGGTGCTGATGTTGAA+AGG | - | chr2_4:911170-911189 | Msa0307770:CDS | 50.0% |
| ACCAATTGAGAGGCCTAGGA+GGG | - | chr2_4:911195-911214 | Msa0307770:CDS | 50.0% | |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | + | chr2_4:911211-911230 | None:intergenic | 50.0% |
| AGGAGGGGGGTTCAACAAAA+TGG | - | chr2_4:911211-911230 | Msa0307770:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | - | chr2_4:911238-911257 | Msa0307770:CDS | 50.0% | |
| !! | GAGAATGACAATGGTGGTGG+TGG | - | chr2_4:911241-911260 | Msa0307770:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | - | chr2_4:911294-911313 | Msa0307770:CDS | 50.0% |
| TGAAGCTGGTAAGAAGGCTG+TGG | - | chr2_4:911327-911346 | Msa0307770:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | - | chr2_4:911402-911421 | Msa0307770:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | - | chr2_4:911421-911440 | Msa0307770:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | - | chr2_4:911432-911451 | Msa0307770:CDS | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | - | chr2_4:911433-911452 | Msa0307770:CDS | 50.0% | |
| GTGAGACAGGGGAACGTAAA+CGG | - | chr2_4:911445-911464 | Msa0307770:CDS | 50.0% | |
| TGAGACAGGGGAACGTAAAC+GGG | - | chr2_4:911446-911465 | Msa0307770:CDS | 50.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | - | chr2_4:909995-910014 | Msa0307770:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | + | chr2_4:910101-910120 | None:intergenic | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | + | chr2_4:910251-910270 | None:intergenic | 50.0% | |
| !! | AAGCAAACGGGTTACGGTTC+GGG | + | chr2_4:910272-910291 | None:intergenic | 50.0% |
| ATAGGTTGCGGTTGTTGCTG+TGG | + | chr2_4:910441-910460 | None:intergenic | 50.0% | |
| AAATGCTGTGGTTGCGGTTG+TGG | + | chr2_4:910480-910499 | None:intergenic | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | + | chr2_4:910492-910511 | None:intergenic | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | + | chr2_4:910690-910709 | None:intergenic | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | - | chr2_4:910717-910736 | Msa0307770:CDS | 50.0% | |
| ATGGCGCGAAGAAGAATGCT+CGG | - | chr2_4:910987-911006 | Msa0307770:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | - | chr2_4:910992-911011 | Msa0307770:CDS | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | - | chr2_4:910993-911012 | Msa0307770:CDS | 50.0% | |
| ! | TAGCAGTGATGGTGATTGGC+GGG | - | chr2_4:911087-911106 | Msa0307770:CDS | 50.0% |
| GGTACCAAAGGGAGTAGGAT+GGG | - | chr2_4:911109-911128 | Msa0307770:CDS | 50.0% | |
| ! | AGAAGAAGAGGGGCTTTTGG+TGG | - | chr2_4:911148-911167 | Msa0307770:CDS | 50.0% |
| !! | GTGGTGGTGCTGATGTTGAA+AGG | - | chr2_4:911170-911189 | Msa0307770:CDS | 50.0% |
| ACCAATTGAGAGGCCTAGGA+GGG | - | chr2_4:911195-911214 | Msa0307770:CDS | 50.0% | |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | + | chr2_4:911211-911230 | None:intergenic | 50.0% |
| AGGAGGGGGGTTCAACAAAA+TGG | - | chr2_4:911211-911230 | Msa0307770:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | - | chr2_4:911238-911257 | Msa0307770:CDS | 50.0% | |
| !! | GAGAATGACAATGGTGGTGG+TGG | - | chr2_4:911241-911260 | Msa0307770:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | - | chr2_4:911294-911313 | Msa0307770:CDS | 50.0% |
| TGAAGCTGGTAAGAAGGCTG+TGG | - | chr2_4:911327-911346 | Msa0307770:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | - | chr2_4:911402-911421 | Msa0307770:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | - | chr2_4:911421-911440 | Msa0307770:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | - | chr2_4:911432-911451 | Msa0307770:CDS | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | - | chr2_4:911433-911452 | Msa0307770:CDS | 50.0% | |
| GTGAGACAGGGGAACGTAAA+CGG | - | chr2_4:911445-911464 | Msa0307770:CDS | 50.0% | |
| TGAGACAGGGGAACGTAAAC+GGG | - | chr2_4:911446-911465 | Msa0307770:CDS | 50.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | + | chr2_4:910073-910092 | None:intergenic | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | + | chr2_4:910079-910098 | None:intergenic | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | + | chr2_4:910097-910116 | None:intergenic | 55.0% | |
| TGTTGCTGTGGATGTGGTGG+TGG | + | chr2_4:910429-910448 | None:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | + | chr2_4:910432-910451 | None:intergenic | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | + | chr2_4:910435-910454 | None:intergenic | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | + | chr2_4:910471-910490 | None:intergenic | 55.0% | |
| CTGATGAGTCTACTGGGCCT+AGG | - | chr2_4:910637-910656 | Msa0307770:CDS | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | - | chr2_4:910681-910700 | Msa0307770:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | - | chr2_4:910839-910858 | Msa0307770:intron | 55.0% | |
| CGCGAAGAAGAATGCTCGGA+AGG | - | chr2_4:910991-911010 | Msa0307770:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | - | chr2_4:911036-911055 | Msa0307770:CDS | 55.0% | |
| ! | AGCAGTGATGGTGATTGGCG+GGG | - | chr2_4:911088-911107 | Msa0307770:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | - | chr2_4:911098-911117 | Msa0307770:CDS | 55.0% |
| GGGTACCAAAGGGAGTAGGA+TGG | - | chr2_4:911108-911127 | Msa0307770:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | + | chr2_4:911116-911135 | None:intergenic | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | - | chr2_4:911113-911132 | Msa0307770:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | - | chr2_4:911119-911138 | Msa0307770:CDS | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | - | chr2_4:911122-911141 | Msa0307770:CDS | 55.0% | |
| ! | AGAAGAGGGGCTTTTGGTGG+TGG | - | chr2_4:911151-911170 | Msa0307770:CDS | 55.0% |
| GGAGACCAATTGAGAGGCCT+AGG | - | chr2_4:911191-911210 | Msa0307770:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | - | chr2_4:911194-911213 | Msa0307770:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | - | chr2_4:911196-911215 | Msa0307770:CDS | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | - | chr2_4:911197-911216 | Msa0307770:CDS | 55.0% | |
| AATTGAGAGGCCTAGGAGGG+GGG | - | chr2_4:911198-911217 | Msa0307770:CDS | 55.0% | |
| !! | TGGTGGTGGTGGTGACAATG+TGG | - | chr2_4:911252-911271 | Msa0307770:CDS | 55.0% |
| AGCTGGTAAGAAGGCTGTGG+TGG | - | chr2_4:911330-911349 | Msa0307770:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | - | chr2_4:911331-911350 | Msa0307770:CDS | 55.0% | |
| CTGCTAGTGGAGTGAGACAG+GGG | - | chr2_4:911434-911453 | Msa0307770:CDS | 55.0% | |
| AGGGGAACGTAAACGGGACA+GGG | - | chr2_4:911452-911471 | Msa0307770:CDS | 55.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | + | chr2_4:910073-910092 | None:intergenic | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | + | chr2_4:910079-910098 | None:intergenic | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | + | chr2_4:910097-910116 | None:intergenic | 55.0% | |
| TGTTGCTGTGGATGTGGTGG+TGG | + | chr2_4:910429-910448 | None:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | + | chr2_4:910432-910451 | None:intergenic | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | + | chr2_4:910435-910454 | None:intergenic | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | + | chr2_4:910471-910490 | None:intergenic | 55.0% | |
| CTGATGAGTCTACTGGGCCT+AGG | - | chr2_4:910637-910656 | Msa0307770:CDS | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | - | chr2_4:910681-910700 | Msa0307770:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | - | chr2_4:910839-910858 | Msa0307770:intron | 55.0% | |
| CGCGAAGAAGAATGCTCGGA+AGG | - | chr2_4:910991-911010 | Msa0307770:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | - | chr2_4:911036-911055 | Msa0307770:CDS | 55.0% | |
| ! | AGCAGTGATGGTGATTGGCG+GGG | - | chr2_4:911088-911107 | Msa0307770:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | - | chr2_4:911098-911117 | Msa0307770:CDS | 55.0% |
| GGGTACCAAAGGGAGTAGGA+TGG | - | chr2_4:911108-911127 | Msa0307770:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | + | chr2_4:911116-911135 | None:intergenic | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | - | chr2_4:911113-911132 | Msa0307770:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | - | chr2_4:911119-911138 | Msa0307770:CDS | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | - | chr2_4:911122-911141 | Msa0307770:CDS | 55.0% | |
| ! | AGAAGAGGGGCTTTTGGTGG+TGG | - | chr2_4:911151-911170 | Msa0307770:CDS | 55.0% |
| GGAGACCAATTGAGAGGCCT+AGG | - | chr2_4:911191-911210 | Msa0307770:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | - | chr2_4:911194-911213 | Msa0307770:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | - | chr2_4:911196-911215 | Msa0307770:CDS | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | - | chr2_4:911197-911216 | Msa0307770:CDS | 55.0% | |
| AATTGAGAGGCCTAGGAGGG+GGG | - | chr2_4:911198-911217 | Msa0307770:CDS | 55.0% | |
| !! | TGGTGGTGGTGGTGACAATG+TGG | - | chr2_4:911252-911271 | Msa0307770:CDS | 55.0% |
| AGCTGGTAAGAAGGCTGTGG+TGG | - | chr2_4:911330-911349 | Msa0307770:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | - | chr2_4:911331-911350 | Msa0307770:CDS | 55.0% | |
| CTGCTAGTGGAGTGAGACAG+GGG | - | chr2_4:911434-911453 | Msa0307770:CDS | 55.0% | |
| AGGGGAACGTAAACGGGACA+GGG | - | chr2_4:911452-911471 | Msa0307770:CDS | 55.0% | |
| ACGCGCGCTGAGGAGTTTGT+TGG | + | chr2_4:910031-910050 | None:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | - | chr2_4:910039-910058 | Msa0307770:CDS | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | + | chr2_4:910067-910086 | None:intergenic | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | + | chr2_4:910068-910087 | None:intergenic | 60.0% | |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | + | chr2_4:910263-910282 | None:intergenic | 60.0% |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | + | chr2_4:910266-910285 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTTGTGGTTG+CGG | + | chr2_4:910408-910427 | None:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | + | chr2_4:910423-910442 | None:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | + | chr2_4:910426-910445 | None:intergenic | 60.0% |
| TGCTGTGGTTGCGGTTGTGG+TGG | + | chr2_4:910477-910496 | None:intergenic | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | - | chr2_4:910811-910830 | Msa0307770:intron | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | + | chr2_4:910830-910849 | None:intergenic | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | + | chr2_4:910833-910852 | None:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | - | chr2_4:910830-910849 | Msa0307770:intron | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | - | chr2_4:910838-910857 | Msa0307770:intron | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | - | chr2_4:910844-910863 | Msa0307770:intron | 60.0% | |
| ! | GGTGATTGGCGGGGTACCAA+AGG | - | chr2_4:911097-911116 | Msa0307770:CDS | 60.0% |
| !!! | AGAGGGGCTTTTGGTGGTGG+TGG | - | chr2_4:911154-911173 | Msa0307770:CDS | 60.0% |
| CCCCTCCTAGGCCTCTCAAT+TGG | + | chr2_4:911199-911218 | None:intergenic | 60.0% | |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | - | chr2_4:911334-911353 | Msa0307770:CDS | 60.0% |
| !! | CTGTGGTGGGTGGTTCGAGA+AGG | - | chr2_4:911344-911363 | Msa0307770:CDS | 60.0% |
| GTGGGTGGTTCGAGAAGGAG+AGG | - | chr2_4:911349-911368 | Msa0307770:CDS | 60.0% | |
| ! | GGTTCGAGAAGGAGAGGTGC+TGG | - | chr2_4:911355-911374 | Msa0307770:CDS | 60.0% |
| CAGGGGAACGTAAACGGGAC+AGG | - | chr2_4:911451-911470 | Msa0307770:CDS | 60.0% | |
| AAACGGGACAGGGAATGCCG+AGG | - | chr2_4:911462-911481 | Msa0307770:CDS | 60.0% | |
| ACGCGCGCTGAGGAGTTTGT+TGG | + | chr2_4:910031-910050 | None:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | - | chr2_4:910039-910058 | Msa0307770:CDS | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | + | chr2_4:910067-910086 | None:intergenic | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | + | chr2_4:910068-910087 | None:intergenic | 60.0% | |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | + | chr2_4:910263-910282 | None:intergenic | 60.0% |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | + | chr2_4:910266-910285 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTTGTGGTTG+CGG | + | chr2_4:910408-910427 | None:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | + | chr2_4:910423-910442 | None:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | + | chr2_4:910426-910445 | None:intergenic | 60.0% |
| TGCTGTGGTTGCGGTTGTGG+TGG | + | chr2_4:910477-910496 | None:intergenic | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | - | chr2_4:910811-910830 | Msa0307770:intron | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | + | chr2_4:910830-910849 | None:intergenic | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | + | chr2_4:910833-910852 | None:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | - | chr2_4:910830-910849 | Msa0307770:intron | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | - | chr2_4:910838-910857 | Msa0307770:intron | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | - | chr2_4:910844-910863 | Msa0307770:intron | 60.0% | |
| ! | GGTGATTGGCGGGGTACCAA+AGG | - | chr2_4:911097-911116 | Msa0307770:CDS | 60.0% |
| !!! | AGAGGGGCTTTTGGTGGTGG+TGG | - | chr2_4:911154-911173 | Msa0307770:CDS | 60.0% |
| CCCCTCCTAGGCCTCTCAAT+TGG | + | chr2_4:911199-911218 | None:intergenic | 60.0% | |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | - | chr2_4:911334-911353 | Msa0307770:CDS | 60.0% |
| !! | CTGTGGTGGGTGGTTCGAGA+AGG | - | chr2_4:911344-911363 | Msa0307770:CDS | 60.0% |
| GTGGGTGGTTCGAGAAGGAG+AGG | - | chr2_4:911349-911368 | Msa0307770:CDS | 60.0% | |
| ! | GGTTCGAGAAGGAGAGGTGC+TGG | - | chr2_4:911355-911374 | Msa0307770:CDS | 60.0% |
| CAGGGGAACGTAAACGGGAC+AGG | - | chr2_4:911451-911470 | Msa0307770:CDS | 60.0% | |
| AAACGGGACAGGGAATGCCG+AGG | - | chr2_4:911462-911481 | Msa0307770:CDS | 60.0% | |
| CGTGTAAGTCACGCGCGCTG+AGG | + | chr2_4:910041-910060 | None:intergenic | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | - | chr2_4:910061-910080 | Msa0307770:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | - | chr2_4:910062-910081 | Msa0307770:CDS | 65.0% | |
| ! | GGTGGTGGTTGTGGTTGCGG+CGG | + | chr2_4:910405-910424 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGTGGTGGTTG+TGG | + | chr2_4:910414-910433 | None:intergenic | 65.0% |
| !! | GGATGTGGTGGTGGTGGTGG+TGG | + | chr2_4:910420-910439 | None:intergenic | 65.0% |
| AGTCTACTGGGCCTAGGCCC+AGG | - | chr2_4:910643-910662 | Msa0307770:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | + | chr2_4:910669-910688 | None:intergenic | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | - | chr2_4:910669-910688 | Msa0307770:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | - | chr2_4:910848-910867 | Msa0307770:intron | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | - | chr2_4:910851-910870 | Msa0307770:intron | 65.0% | |
| AAGCTCCGCGAACGCTGCAC+AGG | + | chr2_4:911044-911063 | None:intergenic | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | - | chr2_4:911104-911123 | Msa0307770:CDS | 65.0% |
| CGTGTAAGTCACGCGCGCTG+AGG | + | chr2_4:910041-910060 | None:intergenic | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | - | chr2_4:910061-910080 | Msa0307770:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | - | chr2_4:910062-910081 | Msa0307770:CDS | 65.0% | |
| ! | GGTGGTGGTTGTGGTTGCGG+CGG | + | chr2_4:910405-910424 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGTGGTGGTTG+TGG | + | chr2_4:910414-910433 | None:intergenic | 65.0% |
| !! | GGATGTGGTGGTGGTGGTGG+TGG | + | chr2_4:910420-910439 | None:intergenic | 65.0% |
| AGTCTACTGGGCCTAGGCCC+AGG | - | chr2_4:910643-910662 | Msa0307770:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | + | chr2_4:910669-910688 | None:intergenic | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | - | chr2_4:910669-910688 | Msa0307770:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | - | chr2_4:910848-910867 | Msa0307770:intron | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | - | chr2_4:910851-910870 | Msa0307770:intron | 65.0% | |
| AAGCTCCGCGAACGCTGCAC+AGG | + | chr2_4:911044-911063 | None:intergenic | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | - | chr2_4:911104-911123 | Msa0307770:CDS | 65.0% |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | + | chr2_4:910396-910415 | None:intergenic | 70.0% |
| GGTTGTGGTTGCGGCGGTGG+TGG | + | chr2_4:910399-910418 | None:intergenic | 70.0% | |
| GGTGGTTGTGGTTGCGGCGG+TGG | + | chr2_4:910402-910421 | None:intergenic | 70.0% | |
| TACTGGGCCTAGGCCCAGGC+CGG | - | chr2_4:910647-910666 | Msa0307770:CDS | 70.0% | |
| GGTAGTACGGGCACCACCGG+AGG | - | chr2_4:910814-910833 | Msa0307770:intron | 70.0% | |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | + | chr2_4:910396-910415 | None:intergenic | 70.0% |
| GGTTGTGGTTGCGGCGGTGG+TGG | + | chr2_4:910399-910418 | None:intergenic | 70.0% | |
| GGTGGTTGTGGTTGCGGCGG+TGG | + | chr2_4:910402-910421 | None:intergenic | 70.0% | |
| TACTGGGCCTAGGCCCAGGC+CGG | - | chr2_4:910647-910666 | Msa0307770:CDS | 70.0% | |
| GGTAGTACGGGCACCACCGG+AGG | - | chr2_4:910814-910833 | Msa0307770:intron | 70.0% | |
| GCAGACTCCGGCCTGGGCCT+AGG | + | chr2_4:910657-910676 | None:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | - | chr2_4:910657-910676 | Msa0307770:CDS | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | - | chr2_4:910658-910677 | Msa0307770:CDS | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | - | chr2_4:910659-910678 | Msa0307770:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | + | chr2_4:910663-910682 | None:intergenic | 75.0% | |
| AGCCCCAGCAGACTCCGGCC+TGG | + | chr2_4:910664-910683 | None:intergenic | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | - | chr2_4:910821-910840 | Msa0307770:intron | 75.0% | |
| GCAGACTCCGGCCTGGGCCT+AGG | + | chr2_4:910657-910676 | None:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | - | chr2_4:910657-910676 | Msa0307770:CDS | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | - | chr2_4:910658-910677 | Msa0307770:CDS | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | - | chr2_4:910659-910678 | Msa0307770:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | + | chr2_4:910663-910682 | None:intergenic | 75.0% | |
| AGCCCCAGCAGACTCCGGCC+TGG | + | chr2_4:910664-910683 | None:intergenic | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | - | chr2_4:910821-910840 | Msa0307770:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 909982 | 911585 | 909982 | ID=Msa0307770;Name=Msa0307770 |
| chr2_4 | mRNA | 909982 | 911585 | 909982 | ID=Msa0307770-mRNA-1;Parent=Msa0307770;Name=Msa0307770-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|2|0|497 |
| chr2_4 | exon | 910865 | 911585 | 910865 | ID=Msa0307770-mRNA-1:exon:353;Parent=Msa0307770-mRNA-1 |
| chr2_4 | exon | 909982 | 910754 | 909982 | ID=Msa0307770-mRNA-1:exon:352;Parent=Msa0307770-mRNA-1 |
| chr2_4 | CDS | 910865 | 911585 | 910865 | ID=Msa0307770-mRNA-1:cds;Parent=Msa0307770-mRNA-1 |
| chr2_4 | CDS | 909982 | 910754 | 909982 | ID=Msa0307770-mRNA-1:cds;Parent=Msa0307770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
