Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0907910 | AES63513.2 | 91.028 | 535 | 45 | 3 | 1 | 533 | 1 | 534 | 0.0 | 842 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008110 | Msa0907910 | 0.810483 | 1.127028e-50 | -8.615850e-47 |
| Msa0090400 | Msa0907910 | 0.844722 | 6.341491e-59 | -8.615850e-47 |
| Msa0644410 | Msa0907910 | 0.829884 | 4.009539e-55 | -8.615850e-47 |
| Msa0689520 | Msa0907910 | 0.809027 | 2.317405e-50 | -8.615850e-47 |
| Msa0137880 | Msa0907910 | 0.838612 | 2.593287e-57 | -8.615850e-47 |
| Msa0149370 | Msa0907910 | 0.810860 | 9.342510e-51 | -8.615850e-47 |
| Msa0190020 | Msa0907910 | 0.884483 | 1.845883e-71 | -8.615850e-47 |
| Msa0419700 | Msa0907910 | 0.817000 | 4.137976e-52 | -8.615850e-47 |
| Msa0442830 | Msa0907910 | 0.805410 | 1.352963e-49 | -8.615850e-47 |
| Msa0267110 | Msa0907910 | 0.828166 | 1.045589e-54 | -8.615850e-47 |
| Msa0307770 | Msa0907910 | 0.950382 | 1.847120e-108 | -8.615850e-47 |
| Msa0511750 | Msa0907910 | 0.810981 | 8.797107e-51 | -8.615850e-47 |
| Msa0548470 | Msa0907910 | 0.828489 | 8.737101e-55 | -8.615850e-47 |
| Msa0907910 | Msa0945110 | 0.816641 | 4.981074e-52 | -8.615850e-47 |
| Msa0907910 | Msa1020560 | 0.807542 | 4.803238e-50 | -8.615850e-47 |
| Msa0907910 | Msa1097980 | 0.824832 | 6.516750e-54 | -8.615850e-47 |
| Msa0907910 | Msa1223470 | 0.828846 | 7.163533e-55 | -8.615850e-47 |
| Msa0907910 | Msa1269480 | 0.824055 | 9.929455e-54 | -8.615850e-47 |
| Msa0907910 | Msa1321340 | 0.807131 | 5.872784e-50 | -8.615850e-47 |
| Msa0907910 | Msa1369550 | 0.828464 | 8.858695e-55 | -8.615850e-47 |
| Msa0907910 | Msa1422420 | 0.803044 | 4.206945e-49 | -8.615850e-47 |
| Msa0907910 | Msa1430920 | 0.934553 | 3.381135e-96 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0907910 | MtrunA17_Chr2g0279591 | 91.028 | 535 | 45 | 3 | 1 | 533 | 1 | 534 | 0.0 | 842 |
| Msa0907910 | MtrunA17_Chr4g0049941 | 51.476 | 542 | 201 | 13 | 1 | 533 | 1 | 489 | 1.07e-153 | 448 |
| Msa0907910 | MtrunA17_Chr5g0427371 | 47.445 | 137 | 72 | 0 | 1 | 137 | 1 | 137 | 2.54e-36 | 138 |
| Msa0907910 | MtrunA17_Chr5g0427371 | 45.070 | 71 | 29 | 3 | 242 | 309 | 186 | 249 | 3.39e-13 | 71.2 |
| Msa0907910 | MtrunA17_Chr3g0132971 | 44.030 | 134 | 72 | 1 | 4 | 134 | 3 | 136 | 7.03e-31 | 119 |
| Msa0907910 | MtrunA17_Chr3g0132971 | 48.529 | 68 | 27 | 2 | 243 | 309 | 148 | 208 | 1.23e-16 | 79.3 |
| Msa0907910 | MtrunA17_Chr3g0132181 | 30.545 | 275 | 167 | 6 | 16 | 282 | 29 | 287 | 2.20e-24 | 107 |
| Msa0907910 | MtrunA17_Chr3g0126501 | 25.965 | 285 | 158 | 4 | 1 | 285 | 1 | 232 | 4.96e-24 | 106 |
| Msa0907910 | MtrunA17_Chr6g0476751 | 26.786 | 280 | 149 | 6 | 5 | 284 | 4 | 227 | 1.72e-23 | 104 |
| Msa0907910 | MtrunA17_Chr2g0286511 | 27.338 | 278 | 148 | 6 | 5 | 279 | 4 | 230 | 8.53e-20 | 93.6 |
| Msa0907910 | MtrunA17_Chr4g0066631 | 35.616 | 146 | 92 | 2 | 5 | 149 | 4 | 148 | 7.91e-18 | 87.4 |
| Msa0907910 | MtrunA17_Chr5g0447431 | 34.146 | 123 | 80 | 1 | 4 | 126 | 3 | 124 | 1.82e-16 | 82.8 |
| Msa0907910 | MtrunA17_Chr8g0367601 | 38.356 | 73 | 41 | 1 | 237 | 309 | 140 | 208 | 3.56e-13 | 69.7 |
| Msa0907910 | MtrunA17_Chr8g0367601 | 33.871 | 124 | 78 | 3 | 13 | 132 | 13 | 136 | 1.08e-11 | 65.5 |
| Msa0907910 | MtrunA17_Chr3g0120851 | 31.667 | 120 | 81 | 1 | 4 | 123 | 3 | 121 | 8.67e-13 | 70.9 |
| Msa0907910 | MtrunA17_Chr1g0178901 | 31.783 | 129 | 86 | 2 | 5 | 132 | 4 | 131 | 1.91e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0907910 | AT5G64360.5 | 36.803 | 538 | 234 | 14 | 8 | 531 | 17 | 462 | 5.13e-91 | 286 |
| Msa0907910 | AT5G64360.7 | 36.803 | 538 | 234 | 14 | 8 | 531 | 17 | 462 | 5.13e-91 | 286 |
| Msa0907910 | AT5G64360.6 | 36.803 | 538 | 234 | 14 | 8 | 531 | 17 | 462 | 5.13e-91 | 286 |
| Msa0907910 | AT5G64360.3 | 36.803 | 538 | 234 | 14 | 8 | 531 | 17 | 462 | 5.13e-91 | 286 |
| Msa0907910 | AT5G64360.2 | 36.803 | 538 | 234 | 14 | 8 | 531 | 17 | 462 | 5.13e-91 | 286 |
| Msa0907910 | AT5G64360.4 | 36.803 | 538 | 234 | 14 | 8 | 531 | 17 | 462 | 5.13e-91 | 286 |
| Msa0907910 | AT5G64360.1 | 35.272 | 533 | 207 | 14 | 8 | 531 | 17 | 420 | 4.50e-86 | 273 |
| Msa0907910 | AT5G09540.1 | 48.872 | 133 | 65 | 2 | 5 | 134 | 10 | 142 | 9.80e-34 | 129 |
| Msa0907910 | AT5G09540.1 | 43.617 | 94 | 40 | 3 | 240 | 332 | 168 | 249 | 1.15e-19 | 89.7 |
| Msa0907910 | AT1G62970.1 | 48.485 | 132 | 63 | 2 | 8 | 134 | 17 | 148 | 7.22e-33 | 134 |
| Msa0907910 | AT1G62970.1 | 33.588 | 131 | 68 | 5 | 219 | 345 | 620 | 735 | 5.61e-17 | 85.1 |
| Msa0907910 | AT2G01710.1 | 49.265 | 136 | 64 | 2 | 5 | 135 | 7 | 142 | 4.17e-32 | 125 |
| Msa0907910 | AT2G01710.1 | 49.296 | 71 | 28 | 2 | 242 | 311 | 165 | 228 | 3.69e-18 | 85.9 |
| Msa0907910 | AT2G01710.2 | 49.265 | 136 | 64 | 2 | 5 | 135 | 51 | 186 | 2.72e-31 | 124 |
| Msa0907910 | AT2G01710.2 | 49.296 | 71 | 28 | 2 | 242 | 311 | 209 | 272 | 6.96e-18 | 85.9 |
| Msa0907910 | AT5G37380.8 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G37380.4 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G37380.7 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G37380.2 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G37380.6 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G37380.1 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G37380.5 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G37380.3 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G37380.9 | 29.431 | 299 | 168 | 7 | 5 | 282 | 4 | 280 | 3.63e-31 | 125 |
| Msa0907910 | AT5G53150.3 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.33e-22 | 102 |
| Msa0907910 | AT5G53150.6 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.33e-22 | 102 |
| Msa0907910 | AT5G53150.2 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.33e-22 | 102 |
| Msa0907910 | AT5G53150.4 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.60e-22 | 102 |
| Msa0907910 | AT5G53150.1 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.60e-22 | 102 |
| Msa0907910 | AT5G53150.5 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 2.34e-22 | 101 |
| Msa0907910 | AT3G06340.2 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.13e-18 | 90.1 |
| Msa0907910 | AT3G06340.4 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.13e-18 | 90.1 |
| Msa0907910 | AT3G06340.3 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.13e-18 | 90.1 |
| Msa0907910 | AT3G06340.1 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.13e-18 | 90.1 |
| Msa0907910 | AT1G62970.2 | 33.588 | 131 | 68 | 5 | 219 | 345 | 465 | 580 | 7.96e-17 | 84.3 |
| Msa0907910 | AT4G19570.1 | 32.812 | 128 | 85 | 1 | 4 | 131 | 3 | 129 | 9.16e-16 | 80.5 |
| Msa0907910 | AT2G05230.1 | 34.146 | 123 | 80 | 1 | 6 | 128 | 5 | 126 | 6.24e-15 | 78.2 |
| Msa0907910 | AT2G05250.1 | 34.146 | 123 | 80 | 1 | 6 | 128 | 5 | 126 | 6.24e-15 | 78.2 |
| Msa0907910 | AT2G25560.1 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 9.96e-15 | 77.8 |
| Msa0907910 | AT3G04980.2 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 2.83e-14 | 76.6 |
| Msa0907910 | AT3G04980.3 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 2.83e-14 | 76.6 |
| Msa0907910 | AT4G19580.1 | 34.188 | 117 | 76 | 1 | 5 | 121 | 4 | 119 | 1.64e-13 | 72.0 |
| Msa0907910 | AT3G04980.1 | 35.455 | 110 | 70 | 1 | 20 | 129 | 1 | 109 | 2.82e-13 | 73.6 |
| Msa0907910 | AT4G19590.3 | 32.812 | 128 | 84 | 2 | 5 | 131 | 4 | 130 | 1.91e-12 | 69.3 |
| Msa0907910 | AT4G19590.2 | 32.812 | 128 | 84 | 2 | 5 | 131 | 4 | 130 | 2.32e-12 | 69.3 |
| Msa0907910 | AT4G19590.1 | 32.479 | 117 | 77 | 2 | 16 | 131 | 4 | 119 | 6.28e-11 | 64.3 |
Find 184 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTGACGGTCAAACTTTC+TGG | 0.186075 | 6_2:-8772522 | Msa0907910:CDS |
| AAGGAGAGGTGCTGGAAATT+TGG | 0.194700 | 6_2:-8771852 | Msa0907910:CDS |
| CTTATGAGGATTTGAGAAAA+TGG | 0.235667 | 6_2:+8772882 | None:intergenic |
| AGGCCCAGGCCGGAGTCTGC+TGG | 0.259644 | 6_2:-8772559 | Msa0907910:CDS |
| AAGAGAAGAAGAGGGGCTTT+TGG | 0.287237 | 6_2:-8772070 | Msa0907910:CDS |
| CATTGGTTGACCTAGGGTTT+TGG | 0.291648 | 6_2:+8772656 | None:intergenic |
| AGGAGAGGTGCTGGAAATTT+GGG | 0.299385 | 6_2:-8771851 | Msa0907910:CDS |
| TCATGATCATAATAACTAAA+AGG | 0.301913 | 6_2:+8772199 | None:intergenic |
| TGCTGGAAATTTGGGTAAGT+TGG | 0.320594 | 6_2:-8771843 | Msa0907910:CDS |
| AAGCAAACGGGTTACGGTTC+GGG | 0.334461 | 6_2:+8772944 | None:intergenic |
| TTCTTCTTCGCGCCATTCAT+AGG | 0.340125 | 6_2:+8772235 | None:intergenic |
| GCAGACTCCGGCCTGGGCCT+AGG | 0.344007 | 6_2:+8772562 | None:intergenic |
| CGCCCGTTCCTTCGCCATTC+GGG | 0.353379 | 6_2:-8773151 | Msa0907910:CDS |
| GGTGGTTGTGGTTGCGGCGG+TGG | 0.354538 | 6_2:+8772814 | None:intergenic |
| GGTCAACCAATGAACCTGTT+AGG | 0.359838 | 6_2:-8772645 | Msa0907910:CDS |
| GCGCCCGTTCCTTCGCCATT+CGG | 0.370967 | 6_2:-8773152 | Msa0907910:CDS |
| AGCCCCAGCAGACTCCGGCC+TGG | 0.373358 | 6_2:+8772555 | None:intergenic |
| ACCTCATCAATCACCCTAAC+AGG | 0.377189 | 6_2:+8772631 | None:intergenic |
| AATCACCCTAACAGGTTCAT+TGG | 0.383228 | 6_2:+8772639 | None:intergenic |
| GGTGGTGGTGGTTGTGGTTG+CGG | 0.384861 | 6_2:+8772808 | None:intergenic |
| TGCTGTGGATGTGGTGGTGG+TGG | 0.386613 | 6_2:+8772793 | None:intergenic |
| GGCCCAGGCCGGAGTCTGCT+GGG | 0.387098 | 6_2:-8772558 | Msa0907910:CDS |
| GCCCCAGCAGACTCCGGCCT+GGG | 0.390143 | 6_2:+8772556 | None:intergenic |
| TCTCTCTTGTTCACGATGCT+TGG | 0.391599 | 6_2:-8772906 | Msa0907910:CDS |
| GGTTGTGGTTGCGGCGGTGG+TGG | 0.399199 | 6_2:+8772817 | None:intergenic |
| TGTGGTTGCGGCGGTGGTGG+TGG | 0.399655 | 6_2:+8772820 | None:intergenic |
| TCATACAAAGCTTTCTTATG+AGG | 0.399685 | 6_2:+8772868 | None:intergenic |
| TGCCCGAATGGCGAAGGAAC+GGG | 0.412075 | 6_2:+8773149 | None:intergenic |
| TTCTGCTAGTGGAGTGAGAC+AGG | 0.412907 | 6_2:-8771783 | Msa0907910:CDS |
| TCAACATTTGACACCATTGC+AGG | 0.413719 | 6_2:+8771908 | None:intergenic |
| TGTGGATGTGGTGGTGGTGG+TGG | 0.414191 | 6_2:+8772796 | None:intergenic |
| CAGGGGAACGTAAACGGGAC+AGG | 0.419825 | 6_2:-8771764 | Msa0907910:CDS |
| TAAGCAAACGGGTTACGGTT+CGG | 0.421723 | 6_2:+8772943 | None:intergenic |
| AGGATAATATTGAAGGGATT+GGG | 0.422331 | 6_2:-8771733 | Msa0907910:CDS |
| AAATGCTGTGGTTGCGGTTG+TGG | 0.425742 | 6_2:+8772739 | None:intergenic |
| CAGCATAAGCAAACGGGTTA+CGG | 0.426424 | 6_2:+8772938 | None:intergenic |
| ACGGCCTGTCCTTACTGTTA+TGG | 0.430147 | 6_2:-8772499 | Msa0907910:CDS |
| CCTACCCATCCTACTCCCTT+TGG | 0.432200 | 6_2:+8772102 | None:intergenic |
| GGATATCAATGGGTCTTCTT+CGG | 0.433579 | 6_2:-8772290 | Msa0907910:CDS |
| TTCTTTGATTCTAGCTTCAC+CGG | 0.434187 | 6_2:+8773062 | None:intergenic |
| GTGAGACAGGGGAACGTAAA+CGG | 0.434508 | 6_2:-8771770 | Msa0907910:CDS |
| TCTGCAACAACGTTAAGAAT+TGG | 0.437792 | 6_2:+8771674 | None:intergenic |
| AGTTCAGTGGCTTCGAATCT+CGG | 0.439160 | 6_2:+8773114 | None:intergenic |
| GGAGACCAATTGAGAGGCCT+AGG | 0.439545 | 6_2:-8772024 | Msa0907910:CDS |
| GAGGATAATATTGAAGGGAT+TGG | 0.440885 | 6_2:-8771734 | Msa0907910:CDS |
| GTTCAGTGGCTTCGAATCTC+GGG | 0.442981 | 6_2:+8773115 | None:intergenic |
| CGGGCACCACCGGAGGTGAC+TGG | 0.443466 | 6_2:-8772394 | Msa0907910:CDS |
| GAAGGAGGAAGAGAAGAAGA+GGG | 0.444043 | 6_2:-8772078 | Msa0907910:CDS |
| AGTCTACTGGGCCTAGGCCC+AGG | 0.445027 | 6_2:-8772573 | Msa0907910:CDS |
| TAAGAATTGGCAAGCTACTA+AGG | 0.450903 | 6_2:+8771687 | None:intergenic |
| GTAGGATGGGTAGGAGAAGG+AGG | 0.454601 | 6_2:-8772093 | Msa0907910:CDS |
| TGAGACAGGGGAACGTAAAC+GGG | 0.455156 | 6_2:-8771769 | Msa0907910:CDS |
| CCCCTCCTAGGCCTCTCAAT+TGG | 0.455567 | 6_2:+8772019 | None:intergenic |
| TTGTTTCATTGCCCTATGAA+TGG | 0.458076 | 6_2:-8772247 | Msa0907910:CDS |
| GCATGAGCAGCATAAGCAAA+CGG | 0.469281 | 6_2:+8772931 | None:intergenic |
| ACGGGTTACGGTTCGGGTCA+AGG | 0.470734 | 6_2:+8772950 | None:intergenic |
| GTCAATGCTGATGAGTCTAC+TGG | 0.470766 | 6_2:-8772586 | Msa0907910:CDS |
| GGAGTAGGATGGGTAGGAGA+AGG | 0.475139 | 6_2:-8772096 | Msa0907910:CDS |
| TCCGGTGTCAGAATTGTAAG+AGG | 0.475899 | 6_2:-8772438 | Msa0907910:CDS |
| AGTTTGACCGTCAGTTTCAC+CGG | 0.476193 | 6_2:+8772528 | None:intergenic |
| GGTGATTGGCGGGGTACCAA+AGG | 0.477928 | 6_2:-8772118 | Msa0907910:CDS |
| GGTGGTAAAGGAAATTGAAT+AGG | 0.479480 | 6_2:+8772760 | None:intergenic |
| GTGCAATCAACATAAACCTT+AGG | 0.482653 | 6_2:+8772463 | None:intergenic |
| TGATACCTGTGCAGCGTTCG+CGG | 0.484855 | 6_2:-8772179 | Msa0907910:CDS |
| CCGTCTTCTCCAGTCACCTC+CGG | 0.487601 | 6_2:+8772385 | None:intergenic |
| ACGCGCGCTGAGGAGTTTGT+TGG | 0.488952 | 6_2:+8773185 | None:intergenic |
| CATGAGCAGCATAAGCAAAC+GGG | 0.491884 | 6_2:+8772932 | None:intergenic |
| GAGTCTGCTGGGGCTAAGCC+CGG | 0.494733 | 6_2:-8772547 | Msa0907910:CDS |
| TGTTGCTGTGGATGTGGTGG+TGG | 0.498810 | 6_2:+8772790 | None:intergenic |
| AGAAGGAGGAAGAGAAGAAG+AGG | 0.499015 | 6_2:-8772079 | Msa0907910:CDS |
| CTGATGAGTCTACTGGGCCT+AGG | 0.503024 | 6_2:-8772579 | Msa0907910:CDS |
| CAATTGAGAGGCCTAGGAGG+GGG | 0.504720 | 6_2:-8772018 | Msa0907910:CDS |
| CGCGAAGAAGAATGCTCGGA+AGG | 0.506788 | 6_2:-8772224 | Msa0907910:CDS |
| TGGCATGTTTGAGTATCCTA+AGG | 0.510841 | 6_2:-8772479 | Msa0907910:CDS |
| GGTTCGAGAAGGAGAGGTGC+TGG | 0.513952 | 6_2:-8771860 | Msa0907910:CDS |
| TCTTCTTCGCGCCATTCATA+GGG | 0.514484 | 6_2:+8772236 | None:intergenic |
| TACTGGGCCTAGGCCCAGGC+CGG | 0.518600 | 6_2:-8772569 | Msa0907910:CDS |
| GACGGTGACGAGGGAGAGGT+TGG | 0.518695 | 6_2:-8772367 | Msa0907910:CDS |
| CAGGTTCATTGGTTGACCTA+GGG | 0.520104 | 6_2:+8772650 | None:intergenic |
| TGCGGTTGTTGCTGTGGATG+TGG | 0.520536 | 6_2:+8772784 | None:intergenic |
| AAGCTCCGCGAACGCTGCAC+AGG | 0.521459 | 6_2:+8772174 | None:intergenic |
| GTCGGATTCTTGTGCCCGAA+TGG | 0.522206 | 6_2:+8773137 | None:intergenic |
| GTCAACCAATGAACCTGTTA+GGG | 0.524013 | 6_2:-8772644 | Msa0907910:CDS |
| GGCTTAGCCCCAGCAGACTC+CGG | 0.527248 | 6_2:+8772550 | None:intergenic |
| ATGATAGCAGTGATGGTGAT+TGG | 0.532126 | 6_2:-8772132 | Msa0907910:CDS |
| AGTGGTAGTACGGGCACCAC+CGG | 0.535051 | 6_2:-8772404 | Msa0907910:CDS |
| GTGATTGGCGGGGTACCAAA+GGG | 0.538758 | 6_2:-8772117 | Msa0907910:CDS |
| TGCTACTTCTGTGCCTGCAA+TGG | 0.539629 | 6_2:-8771921 | Msa0907910:CDS |
| GTGGAAGAAGCTTCTGCTAG+TGG | 0.544361 | 6_2:-8771794 | Msa0907910:CDS |
| AAAGGAAATTGAATAGGTTG+CGG | 0.545323 | 6_2:+8772766 | None:intergenic |
| GGTAAGAAGGCTGTGGTGGG+TGG | 0.548348 | 6_2:-8771881 | Msa0907910:CDS |
| ATAGCGAAGGATTTGAAGAA+TGG | 0.549445 | 6_2:+8773023 | None:intergenic |
| AAATTCCCACTAAACCCTAA+AGG | 0.552901 | 6_2:+8772316 | None:intergenic |
| TTGATGAGGTACAAAACAAT+GGG | 0.553432 | 6_2:-8772618 | Msa0907910:CDS |
| CGTGTAAGTCACGCGCGCTG+AGG | 0.553465 | 6_2:+8773175 | None:intergenic |
| GACCAATTGAGAGGCCTAGG+AGG | 0.554781 | 6_2:-8772021 | Msa0907910:CDS |
| ACAGGTTCATTGGTTGACCT+AGG | 0.556407 | 6_2:+8772649 | None:intergenic |
| AATGCCGAGGATAATATTGA+AGG | 0.557483 | 6_2:-8771740 | Msa0907910:CDS |
| TTCTTGTGCCCGAATGGCGA+AGG | 0.557741 | 6_2:+8773143 | None:intergenic |
| ACCAATTGAGAGGCCTAGGA+GGG | 0.558221 | 6_2:-8772020 | Msa0907910:CDS |
| TAGCAGTGATGGTGATTGGC+GGG | 0.559217 | 6_2:-8772128 | Msa0907910:CDS |
| CGAAGAAGAATGCTCGGAAG+GGG | 0.559633 | 6_2:-8772222 | Msa0907910:CDS |
| TGCAAGACGGCGATATTGAT+CGG | 0.559726 | 6_2:+8772978 | None:intergenic |
| GCGAAGAAGAATGCTCGGAA+GGG | 0.560744 | 6_2:-8772223 | Msa0907910:CDS |
| AGAAGACGGTGACGAGGGAG+AGG | 0.562730 | 6_2:-8772371 | Msa0907910:CDS |
| TCAAACATGCCATAACAGTA+AGG | 0.564616 | 6_2:+8772490 | None:intergenic |
| TCAATGGGTCTTCTTCGGAA+TGG | 0.566181 | 6_2:-8772285 | Msa0907910:CDS |
| GGTGACGAGGGAGAGGTTGG+TGG | 0.566487 | 6_2:-8772364 | Msa0907910:CDS |
| GCCCAGGCCGGAGTCTGCTG+GGG | 0.569311 | 6_2:-8772557 | Msa0907910:CDS |
| AGGGGAACGTAAACGGGACA+GGG | 0.570152 | 6_2:-8771763 | Msa0907910:CDS |
| CAATGAAACAAAGCAGACAT+AGG | 0.570623 | 6_2:+8772259 | None:intergenic |
| GTGCCCGAATGGCGAAGGAA+CGG | 0.570710 | 6_2:+8773148 | None:intergenic |
| AGCTGGTAAGAAGGCTGTGG+TGG | 0.571053 | 6_2:-8771885 | Msa0907910:CDS |
| GTGGTGGTGCTGATGTTGAA+AGG | 0.573169 | 6_2:-8772045 | Msa0907910:CDS |
| GGTTGCGGTTGTGGTGGTAA+AGG | 0.574236 | 6_2:+8772748 | None:intergenic |
| TGCTGTGGTTGCGGTTGTGG+TGG | 0.579718 | 6_2:+8772742 | None:intergenic |
| GAGAATGACAATGGTGGTGG+TGG | 0.580037 | 6_2:-8771974 | Msa0907910:CDS |
| ATTGATGAGGTACAAAACAA+TGG | 0.580790 | 6_2:-8772619 | Msa0907910:CDS |
| AATCCCTTCAATATTATCCT+CGG | 0.583636 | 6_2:+8771736 | None:intergenic |
| GGATGAAAATGCTGTGGTTG+CGG | 0.583652 | 6_2:+8772733 | None:intergenic |
| GACTGGAGAAGACGGTGACG+AGG | 0.583753 | 6_2:-8772377 | Msa0907910:CDS |
| CCAAAGGGAGTAGGATGGGT+AGG | 0.584383 | 6_2:-8772102 | Msa0907910:CDS |
| GGTGGTGGTTGTGGTTGCGG+CGG | 0.586913 | 6_2:+8772811 | None:intergenic |
| TAACGTTGTTGCAGATGACA+AGG | 0.586965 | 6_2:-8771666 | Msa0907910:CDS |
| CTGTGGTGGGTGGTTCGAGA+AGG | 0.587944 | 6_2:-8771871 | Msa0907910:CDS |
| GGTACCAAAGGGAGTAGGAT+GGG | 0.588927 | 6_2:-8772106 | Msa0907910:CDS |
| AAATGTTGAAGCTGGTAAGA+AGG | 0.589973 | 6_2:-8771894 | Msa0907910:CDS |
| AAGGAGGAAGAGAAGAAGAG+GGG | 0.592224 | 6_2:-8772077 | Msa0907910:CDS |
| ATGCCGAGGATAATATTGAA+GGG | 0.593077 | 6_2:-8771739 | Msa0907910:CDS |
| CCGGAGGTGACTGGAGAAGA+CGG | 0.593141 | 6_2:-8772385 | Msa0907910:CDS |
| ATAGGTTGCGGTTGTTGCTG+TGG | 0.593211 | 6_2:+8772778 | None:intergenic |
| GGGTAAGTTGGATTTGAATG+TGG | 0.594650 | 6_2:-8771831 | Msa0907910:CDS |
| AGCCACTGAACTTCTTCTTG+CGG | 0.598213 | 6_2:-8773103 | Msa0907910:CDS |
| TCTGCTAGTGGAGTGAGACA+GGG | 0.598631 | 6_2:-8771782 | Msa0907910:CDS |
| GGGTACCAAAGGGAGTAGGA+TGG | 0.600804 | 6_2:-8772107 | Msa0907910:CDS |
| CCCTCTTACAATTCTGACAC+CGG | 0.604834 | 6_2:+8772437 | None:intergenic |
| CCGGTGTCAGAATTGTAAGA+GGG | 0.604978 | 6_2:-8772437 | Msa0907910:CDS |
| CCAATTGAGAGGCCTAGGAG+GGG | 0.606765 | 6_2:-8772019 | Msa0907910:CDS |
| TCATCAGCATTGACATGACT+CGG | 0.609293 | 6_2:+8772595 | None:intergenic |
| CTCAGCGCGCGTGACTTACA+CGG | 0.610260 | 6_2:-8773174 | Msa0907910:CDS |
| AATTGAGAGGCCTAGGAGGG+GGG | 0.610392 | 6_2:-8772017 | Msa0907910:CDS |
| TTGACTTGAACAGAAGGAGG+AGG | 0.615506 | 6_2:+8772712 | None:intergenic |
| CAATATTCTGAGTATAGCGA+AGG | 0.617357 | 6_2:+8773010 | None:intergenic |
| TTGTCGTTGACTTGAACAGA+AGG | 0.617497 | 6_2:+8772706 | None:intergenic |
| ATGGTGTCAAATGTTGAAGC+TGG | 0.617929 | 6_2:-8771902 | Msa0907910:CDS |
| GTTTGACCGTCAGTTTCACC+GGG | 0.617980 | 6_2:+8772529 | None:intergenic |
| GCTAAGCCCGGTGAAACTGA+CGG | 0.618764 | 6_2:-8772535 | Msa0907910:CDS |
| TTTATGTTGATTGCACACTC+CGG | 0.621302 | 6_2:-8772456 | Msa0907910:CDS |
| TCGTTGACTTGAACAGAAGG+AGG | 0.624401 | 6_2:+8772709 | None:intergenic |
| GGCGGGGTACCAAAGGGAGT+AGG | 0.631128 | 6_2:-8772111 | Msa0907910:CDS |
| GTTATCGACACTCTCTTAGC+CGG | 0.631145 | 6_2:-8773081 | Msa0907910:CDS |
| TGACAATGTGGTTGATGATG+AGG | 0.631213 | 6_2:-8771951 | Msa0907910:CDS |
| TCAATGCTGATGAGTCTACT+GGG | 0.631414 | 6_2:-8772585 | Msa0907910:CDS |
| GCTGGTAAGAAGGCTGTGGT+GGG | 0.632182 | 6_2:-8771884 | Msa0907910:CDS |
| TCTTCTCCAGTCACCTCCGG+TGG | 0.632382 | 6_2:+8772388 | None:intergenic |
| TGAATGGATGGAAGCAACAG+AGG | 0.633889 | 6_2:-8773234 | Msa0907910:CDS |
| GTGGGTGGTTCGAGAAGGAG+AGG | 0.634386 | 6_2:-8771866 | Msa0907910:CDS |
| AGTGGCTTCGAATCTCGGGT+CGG | 0.636739 | 6_2:+8773119 | None:intergenic |
| ATGGCGCGAAGAAGAATGCT+CGG | 0.638976 | 6_2:-8772228 | Msa0907910:CDS |
| GGTAGTACGGGCACCACCGG+AGG | 0.640935 | 6_2:-8772401 | Msa0907910:CDS |
| ATAGCAGTGATGGTGATTGG+CGG | 0.641839 | 6_2:-8772129 | Msa0907910:CDS |
| CATGCCATAACAGTAAGGAC+AGG | 0.644058 | 6_2:+8772495 | None:intergenic |
| TTGAAAGGAGACCAATTGAG+AGG | 0.647944 | 6_2:-8772030 | Msa0907910:CDS |
| GATGATGATGATAGCAGTGA+TGG | 0.649786 | 6_2:-8772139 | Msa0907910:CDS |
| GCTGAGAATGACAATGGTGG+TGG | 0.654227 | 6_2:-8771977 | Msa0907910:CDS |
| TGACGGTCAAACTTTCTGGA+CGG | 0.654449 | 6_2:-8772518 | Msa0907910:CDS |
| CTGCTAGTGGAGTGAGACAG+GGG | 0.659459 | 6_2:-8771781 | Msa0907910:CDS |
| GGTCAAGGAGGATTGCAAGA+CGG | 0.660142 | 6_2:+8772965 | None:intergenic |
| ACTGGAGAAGACGGTGACGA+GGG | 0.666817 | 6_2:-8772376 | Msa0907910:CDS |
| TGTGGAGTTCAGCAATGAGG+TGG | 0.670708 | 6_2:-8771813 | Msa0907910:CDS |
| AACCGCAAGAAGAAGTTCAG+TGG | 0.670841 | 6_2:+8773101 | None:intergenic |
| GGTTGTTGCTGTGGATGTGG+TGG | 0.676015 | 6_2:+8772787 | None:intergenic |
| CGGTGTCAGAATTGTAAGAG+GGG | 0.678004 | 6_2:-8772436 | Msa0907910:CDS |
| GGTTACGGTTCGGGTCAAGG+AGG | 0.679710 | 6_2:+8772953 | None:intergenic |
| TGAAGCTGGTAAGAAGGCTG+TGG | 0.683764 | 6_2:-8771888 | Msa0907910:CDS |
| GGAGGAGGATGAAAATGCTG+TGG | 0.684139 | 6_2:+8772727 | None:intergenic |
| AGCAGTGATGGTGATTGGCG+GGG | 0.685255 | 6_2:-8772127 | Msa0907910:CDS |
| ACAGAGGTGAAGCTGAACGA+TGG | 0.691288 | 6_2:-8773218 | Msa0907910:CDS |
| TGGTGGTGGTGGTGACAATG+TGG | 0.696568 | 6_2:-8771963 | Msa0907910:CDS |
| GGTAATGCTGAGAATGACAA+TGG | 0.707753 | 6_2:-8771983 | Msa0907910:CDS |
| GAATGTGGAGTTCAGCAATG+AGG | 0.710179 | 6_2:-8771816 | Msa0907910:CDS |
| ACCTGTTAGGGTGATTGATG+AGG | 0.712723 | 6_2:-8772632 | Msa0907910:CDS |
| AAACGGGACAGGGAATGCCG+AGG | 0.720567 | 6_2:-8771753 | Msa0907910:CDS |
| AATGCTGAGAATGACAATGG+TGG | 0.774129 | 6_2:-8771980 | Msa0907910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATGATCATAATAACTAAA+AGG | + | chr6_2:8772687-8772706 | None:intergenic | 20.0% |
| !! | TCATGATCATAATAACTAAA+AGG | + | chr6_2:8772687-8772706 | None:intergenic | 20.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | - | chr6_2:8772583-8772602 | Msa0907910:CDS | 25.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | - | chr6_2:8772583-8772602 | Msa0907910:CDS | 25.0% |
| CTTATGAGGATTTGAGAAAA+TGG | + | chr6_2:8772004-8772023 | None:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | + | chr6_2:8772018-8772037 | None:intergenic | 30.0% | |
| AAAGGAAATTGAATAGGTTG+CGG | + | chr6_2:8772120-8772139 | None:intergenic | 30.0% | |
| ATTGATGAGGTACAAAACAA+TGG | - | chr6_2:8772264-8772283 | Msa0907910:CDS | 30.0% | |
| TTGATGAGGTACAAAACAAT+GGG | - | chr6_2:8772265-8772284 | Msa0907910:CDS | 30.0% | |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | - | chr6_2:8772562-8772581 | Msa0907910:CDS | 30.0% |
| !! | GGGAATTTTAAGGATATCAA+TGG | - | chr6_2:8772582-8772601 | Msa0907910:CDS | 30.0% |
| AATCCCTTCAATATTATCCT+CGG | + | chr6_2:8773150-8773169 | None:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | - | chr6_2:8773150-8773169 | Msa0907910:CDS | 30.0% | |
| CTTATGAGGATTTGAGAAAA+TGG | + | chr6_2:8772004-8772023 | None:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | + | chr6_2:8772018-8772037 | None:intergenic | 30.0% | |
| AAAGGAAATTGAATAGGTTG+CGG | + | chr6_2:8772120-8772139 | None:intergenic | 30.0% | |
| ATTGATGAGGTACAAAACAA+TGG | - | chr6_2:8772264-8772283 | Msa0907910:CDS | 30.0% | |
| TTGATGAGGTACAAAACAAT+GGG | - | chr6_2:8772265-8772284 | Msa0907910:CDS | 30.0% | |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | - | chr6_2:8772562-8772581 | Msa0907910:CDS | 30.0% |
| !! | GGGAATTTTAAGGATATCAA+TGG | - | chr6_2:8772582-8772601 | Msa0907910:CDS | 30.0% |
| AATCCCTTCAATATTATCCT+CGG | + | chr6_2:8773150-8773169 | None:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | - | chr6_2:8773150-8773169 | Msa0907910:CDS | 30.0% | |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | + | chr6_2:8771824-8771843 | None:intergenic | 35.0% |
| ATAGCGAAGGATTTGAAGAA+TGG | + | chr6_2:8771863-8771882 | None:intergenic | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | + | chr6_2:8771876-8771895 | None:intergenic | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | + | chr6_2:8772126-8772145 | None:intergenic | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | - | chr6_2:8772217-8772236 | Msa0907910:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | + | chr6_2:8772396-8772415 | None:intergenic | 35.0% | |
| GTGCAATCAACATAAACCTT+AGG | + | chr6_2:8772423-8772442 | None:intergenic | 35.0% | |
| ! | TTTATGTTGATTGCACACTC+CGG | - | chr6_2:8772427-8772446 | Msa0907910:CDS | 35.0% |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | - | chr6_2:8772538-8772557 | Msa0907910:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | - | chr6_2:8772561-8772580 | Msa0907910:CDS | 35.0% |
| AAATTCCCACTAAACCCTAA+AGG | + | chr6_2:8772570-8772589 | None:intergenic | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | - | chr6_2:8772572-8772591 | Msa0907910:CDS | 35.0% |
| CAATGAAACAAAGCAGACAT+AGG | + | chr6_2:8772627-8772646 | None:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | - | chr6_2:8772636-8772655 | Msa0907910:CDS | 35.0% | |
| AAATGTTGAAGCTGGTAAGA+AGG | - | chr6_2:8772989-8773008 | Msa0907910:CDS | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | - | chr6_2:8773143-8773162 | Msa0907910:CDS | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | - | chr6_2:8773144-8773163 | Msa0907910:CDS | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | - | chr6_2:8773149-8773168 | Msa0907910:CDS | 35.0% | |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | - | chr6_2:8773162-8773181 | Msa0907910:CDS | 35.0% |
| TAAGAATTGGCAAGCTACTA+AGG | + | chr6_2:8773199-8773218 | None:intergenic | 35.0% | |
| TCTGCAACAACGTTAAGAAT+TGG | + | chr6_2:8773212-8773231 | None:intergenic | 35.0% | |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | + | chr6_2:8771824-8771843 | None:intergenic | 35.0% |
| ATAGCGAAGGATTTGAAGAA+TGG | + | chr6_2:8771863-8771882 | None:intergenic | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | + | chr6_2:8771876-8771895 | None:intergenic | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | + | chr6_2:8772126-8772145 | None:intergenic | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | - | chr6_2:8772217-8772236 | Msa0907910:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | + | chr6_2:8772396-8772415 | None:intergenic | 35.0% | |
| GTGCAATCAACATAAACCTT+AGG | + | chr6_2:8772423-8772442 | None:intergenic | 35.0% | |
| ! | TTTATGTTGATTGCACACTC+CGG | - | chr6_2:8772427-8772446 | Msa0907910:CDS | 35.0% |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | - | chr6_2:8772538-8772557 | Msa0907910:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | - | chr6_2:8772561-8772580 | Msa0907910:CDS | 35.0% |
| AAATTCCCACTAAACCCTAA+AGG | + | chr6_2:8772570-8772589 | None:intergenic | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | - | chr6_2:8772572-8772591 | Msa0907910:CDS | 35.0% |
| CAATGAAACAAAGCAGACAT+AGG | + | chr6_2:8772627-8772646 | None:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | - | chr6_2:8772636-8772655 | Msa0907910:CDS | 35.0% | |
| AAATGTTGAAGCTGGTAAGA+AGG | - | chr6_2:8772989-8773008 | Msa0907910:CDS | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | - | chr6_2:8773143-8773162 | Msa0907910:CDS | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | - | chr6_2:8773144-8773163 | Msa0907910:CDS | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | - | chr6_2:8773149-8773168 | Msa0907910:CDS | 35.0% | |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | - | chr6_2:8773162-8773181 | Msa0907910:CDS | 35.0% |
| TAAGAATTGGCAAGCTACTA+AGG | + | chr6_2:8773199-8773218 | None:intergenic | 35.0% | |
| TCTGCAACAACGTTAAGAAT+TGG | + | chr6_2:8773212-8773231 | None:intergenic | 35.0% | |
| !! | TTGTCGTTGACTTGAACAGA+AGG | + | chr6_2:8772180-8772199 | None:intergenic | 40.0% |
| GTCAACCAATGAACCTGTTA+GGG | - | chr6_2:8772239-8772258 | Msa0907910:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | + | chr6_2:8772247-8772266 | None:intergenic | 40.0% | |
| !! | TCATCAGCATTGACATGACT+CGG | + | chr6_2:8772291-8772310 | None:intergenic | 40.0% |
| TCAATGCTGATGAGTCTACT+GGG | - | chr6_2:8772298-8772317 | Msa0907910:CDS | 40.0% | |
| AAACTGACGGTCAAACTTTC+TGG | - | chr6_2:8772361-8772380 | Msa0907910:CDS | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | - | chr6_2:8772404-8772423 | Msa0907910:CDS | 40.0% | |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | - | chr6_2:8772469-8772488 | Msa0907910:CDS | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | - | chr6_2:8772470-8772489 | Msa0907910:CDS | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | - | chr6_2:8772537-8772556 | Msa0907910:CDS | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | - | chr6_2:8772552-8772571 | Msa0907910:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | - | chr6_2:8772553-8772572 | Msa0907910:CDS | 40.0% |
| GGATATCAATGGGTCTTCTT+CGG | - | chr6_2:8772593-8772612 | Msa0907910:CDS | 40.0% | |
| ! | GATGATGATGATAGCAGTGA+TGG | - | chr6_2:8772744-8772763 | Msa0907910:CDS | 40.0% |
| ! | ATGATAGCAGTGATGGTGAT+TGG | - | chr6_2:8772751-8772770 | Msa0907910:CDS | 40.0% |
| TTGAAAGGAGACCAATTGAG+AGG | - | chr6_2:8772853-8772872 | Msa0907910:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | - | chr6_2:8772900-8772919 | Msa0907910:CDS | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | - | chr6_2:8772903-8772922 | Msa0907910:CDS | 40.0% | |
| !! | TGACAATGTGGTTGATGATG+AGG | - | chr6_2:8772932-8772951 | Msa0907910:CDS | 40.0% |
| TCAACATTTGACACCATTGC+AGG | + | chr6_2:8772978-8772997 | None:intergenic | 40.0% | |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | - | chr6_2:8772981-8773000 | Msa0907910:CDS | 40.0% |
| TGCTGGAAATTTGGGTAAGT+TGG | - | chr6_2:8773040-8773059 | Msa0907910:CDS | 40.0% | |
| ! | GGGTAAGTTGGATTTGAATG+TGG | - | chr6_2:8773052-8773071 | Msa0907910:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | - | chr6_2:8773161-8773180 | Msa0907910:CDS | 40.0% |
| TAACGTTGTTGCAGATGACA+AGG | - | chr6_2:8773217-8773236 | Msa0907910:CDS | 40.0% | |
| !! | TTGTCGTTGACTTGAACAGA+AGG | + | chr6_2:8772180-8772199 | None:intergenic | 40.0% |
| GTCAACCAATGAACCTGTTA+GGG | - | chr6_2:8772239-8772258 | Msa0907910:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | + | chr6_2:8772247-8772266 | None:intergenic | 40.0% | |
| !! | TCATCAGCATTGACATGACT+CGG | + | chr6_2:8772291-8772310 | None:intergenic | 40.0% |
| TCAATGCTGATGAGTCTACT+GGG | - | chr6_2:8772298-8772317 | Msa0907910:CDS | 40.0% | |
| AAACTGACGGTCAAACTTTC+TGG | - | chr6_2:8772361-8772380 | Msa0907910:CDS | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | - | chr6_2:8772404-8772423 | Msa0907910:CDS | 40.0% | |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | - | chr6_2:8772469-8772488 | Msa0907910:CDS | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | - | chr6_2:8772470-8772489 | Msa0907910:CDS | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | - | chr6_2:8772537-8772556 | Msa0907910:CDS | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | - | chr6_2:8772552-8772571 | Msa0907910:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | - | chr6_2:8772553-8772572 | Msa0907910:CDS | 40.0% |
| GGATATCAATGGGTCTTCTT+CGG | - | chr6_2:8772593-8772612 | Msa0907910:CDS | 40.0% | |
| ! | GATGATGATGATAGCAGTGA+TGG | - | chr6_2:8772744-8772763 | Msa0907910:CDS | 40.0% |
| ! | ATGATAGCAGTGATGGTGAT+TGG | - | chr6_2:8772751-8772770 | Msa0907910:CDS | 40.0% |
| TTGAAAGGAGACCAATTGAG+AGG | - | chr6_2:8772853-8772872 | Msa0907910:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | - | chr6_2:8772900-8772919 | Msa0907910:CDS | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | - | chr6_2:8772903-8772922 | Msa0907910:CDS | 40.0% | |
| !! | TGACAATGTGGTTGATGATG+AGG | - | chr6_2:8772932-8772951 | Msa0907910:CDS | 40.0% |
| TCAACATTTGACACCATTGC+AGG | + | chr6_2:8772978-8772997 | None:intergenic | 40.0% | |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | - | chr6_2:8772981-8773000 | Msa0907910:CDS | 40.0% |
| TGCTGGAAATTTGGGTAAGT+TGG | - | chr6_2:8773040-8773059 | Msa0907910:CDS | 40.0% | |
| ! | GGGTAAGTTGGATTTGAATG+TGG | - | chr6_2:8773052-8773071 | Msa0907910:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | - | chr6_2:8773161-8773180 | Msa0907910:CDS | 40.0% |
| TAACGTTGTTGCAGATGACA+AGG | - | chr6_2:8773217-8773236 | Msa0907910:CDS | 40.0% | |
| AGTTCAGTGGCTTCGAATCT+CGG | + | chr6_2:8771772-8771791 | None:intergenic | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | - | chr6_2:8771780-8771799 | Msa0907910:CDS | 45.0% | |
| AACCGCAAGAAGAAGTTCAG+TGG | + | chr6_2:8771785-8771804 | None:intergenic | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | - | chr6_2:8771802-8771821 | Msa0907910:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | + | chr6_2:8771908-8771927 | None:intergenic | 45.0% | |
| !! | TAAGCAAACGGGTTACGGTT+CGG | + | chr6_2:8771943-8771962 | None:intergenic | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | + | chr6_2:8771948-8771967 | None:intergenic | 45.0% |
| CATGAGCAGCATAAGCAAAC+GGG | + | chr6_2:8771954-8771973 | None:intergenic | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | + | chr6_2:8771955-8771974 | None:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | - | chr6_2:8771977-8771996 | Msa0907910:CDS | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | + | chr6_2:8772153-8772172 | None:intergenic | 45.0% | |
| ! | TTGACTTGAACAGAAGGAGG+AGG | + | chr6_2:8772174-8772193 | None:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | + | chr6_2:8772177-8772196 | None:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | + | chr6_2:8772230-8772249 | None:intergenic | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | + | chr6_2:8772236-8772255 | None:intergenic | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | + | chr6_2:8772237-8772256 | None:intergenic | 45.0% |
| GGTCAACCAATGAACCTGTT+AGG | - | chr6_2:8772238-8772257 | Msa0907910:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | - | chr6_2:8772251-8772270 | Msa0907910:CDS | 45.0% | |
| ACCTCATCAATCACCCTAAC+AGG | + | chr6_2:8772255-8772274 | None:intergenic | 45.0% | |
| GTCAATGCTGATGAGTCTAC+TGG | - | chr6_2:8772297-8772316 | Msa0907910:CDS | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | + | chr6_2:8772358-8772377 | None:intergenic | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | - | chr6_2:8772365-8772384 | Msa0907910:CDS | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | + | chr6_2:8772391-8772410 | None:intergenic | 45.0% | |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | - | chr6_2:8772445-8772464 | Msa0907910:CDS | 45.0% |
| CCCTCTTACAATTCTGACAC+CGG | + | chr6_2:8772449-8772468 | None:intergenic | 45.0% | |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | - | chr6_2:8772446-8772465 | Msa0907910:CDS | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | - | chr6_2:8772447-8772466 | Msa0907910:CDS | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | - | chr6_2:8772461-8772480 | Msa0907910:CDS | 45.0% |
| TCAATGGGTCTTCTTCGGAA+TGG | - | chr6_2:8772598-8772617 | Msa0907910:CDS | 45.0% | |
| TCTTCTTCGCGCCATTCATA+GGG | + | chr6_2:8772650-8772669 | None:intergenic | 45.0% | |
| TTCTTCTTCGCGCCATTCAT+AGG | + | chr6_2:8772651-8772670 | None:intergenic | 45.0% | |
| ! | ATAGCAGTGATGGTGATTGG+CGG | - | chr6_2:8772754-8772773 | Msa0907910:CDS | 45.0% |
| AGAAGGAGGAAGAGAAGAAG+AGG | - | chr6_2:8772804-8772823 | Msa0907910:CDS | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | - | chr6_2:8772805-8772824 | Msa0907910:CDS | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | - | chr6_2:8772806-8772825 | Msa0907910:CDS | 45.0% | |
| ! | AAGAGAAGAAGAGGGGCTTT+TGG | - | chr6_2:8772813-8772832 | Msa0907910:CDS | 45.0% |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | - | chr6_2:8773031-8773050 | Msa0907910:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | - | chr6_2:8773032-8773051 | Msa0907910:CDS | 45.0% |
| GAATGTGGAGTTCAGCAATG+AGG | - | chr6_2:8773067-8773086 | Msa0907910:CDS | 45.0% | |
| AGTTCAGTGGCTTCGAATCT+CGG | + | chr6_2:8771772-8771791 | None:intergenic | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | - | chr6_2:8771780-8771799 | Msa0907910:CDS | 45.0% | |
| AACCGCAAGAAGAAGTTCAG+TGG | + | chr6_2:8771785-8771804 | None:intergenic | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | - | chr6_2:8771802-8771821 | Msa0907910:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | + | chr6_2:8771908-8771927 | None:intergenic | 45.0% | |
| !! | TAAGCAAACGGGTTACGGTT+CGG | + | chr6_2:8771943-8771962 | None:intergenic | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | + | chr6_2:8771948-8771967 | None:intergenic | 45.0% |
| CATGAGCAGCATAAGCAAAC+GGG | + | chr6_2:8771954-8771973 | None:intergenic | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | + | chr6_2:8771955-8771974 | None:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | - | chr6_2:8771977-8771996 | Msa0907910:CDS | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | + | chr6_2:8772153-8772172 | None:intergenic | 45.0% | |
| ! | TTGACTTGAACAGAAGGAGG+AGG | + | chr6_2:8772174-8772193 | None:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | + | chr6_2:8772177-8772196 | None:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | + | chr6_2:8772230-8772249 | None:intergenic | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | + | chr6_2:8772236-8772255 | None:intergenic | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | + | chr6_2:8772237-8772256 | None:intergenic | 45.0% |
| GGTCAACCAATGAACCTGTT+AGG | - | chr6_2:8772238-8772257 | Msa0907910:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | - | chr6_2:8772251-8772270 | Msa0907910:CDS | 45.0% | |
| ACCTCATCAATCACCCTAAC+AGG | + | chr6_2:8772255-8772274 | None:intergenic | 45.0% | |
| GTCAATGCTGATGAGTCTAC+TGG | - | chr6_2:8772297-8772316 | Msa0907910:CDS | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | + | chr6_2:8772358-8772377 | None:intergenic | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | - | chr6_2:8772365-8772384 | Msa0907910:CDS | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | + | chr6_2:8772391-8772410 | None:intergenic | 45.0% | |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | - | chr6_2:8772445-8772464 | Msa0907910:CDS | 45.0% |
| CCCTCTTACAATTCTGACAC+CGG | + | chr6_2:8772449-8772468 | None:intergenic | 45.0% | |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | - | chr6_2:8772446-8772465 | Msa0907910:CDS | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | - | chr6_2:8772447-8772466 | Msa0907910:CDS | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | - | chr6_2:8772461-8772480 | Msa0907910:CDS | 45.0% |
| TCAATGGGTCTTCTTCGGAA+TGG | - | chr6_2:8772598-8772617 | Msa0907910:CDS | 45.0% | |
| TCTTCTTCGCGCCATTCATA+GGG | + | chr6_2:8772650-8772669 | None:intergenic | 45.0% | |
| TTCTTCTTCGCGCCATTCAT+AGG | + | chr6_2:8772651-8772670 | None:intergenic | 45.0% | |
| ! | ATAGCAGTGATGGTGATTGG+CGG | - | chr6_2:8772754-8772773 | Msa0907910:CDS | 45.0% |
| AGAAGGAGGAAGAGAAGAAG+AGG | - | chr6_2:8772804-8772823 | Msa0907910:CDS | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | - | chr6_2:8772805-8772824 | Msa0907910:CDS | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | - | chr6_2:8772806-8772825 | Msa0907910:CDS | 45.0% | |
| ! | AAGAGAAGAAGAGGGGCTTT+TGG | - | chr6_2:8772813-8772832 | Msa0907910:CDS | 45.0% |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | - | chr6_2:8773031-8773050 | Msa0907910:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | - | chr6_2:8773032-8773051 | Msa0907910:CDS | 45.0% |
| GAATGTGGAGTTCAGCAATG+AGG | - | chr6_2:8773067-8773086 | Msa0907910:CDS | 45.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | - | chr6_2:8771665-8771684 | Msa0907910:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | + | chr6_2:8771771-8771790 | None:intergenic | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | + | chr6_2:8771921-8771940 | None:intergenic | 50.0% | |
| !! | AAGCAAACGGGTTACGGTTC+GGG | + | chr6_2:8771942-8771961 | None:intergenic | 50.0% |
| ATAGGTTGCGGTTGTTGCTG+TGG | + | chr6_2:8772108-8772127 | None:intergenic | 50.0% | |
| AAATGCTGTGGTTGCGGTTG+TGG | + | chr6_2:8772147-8772166 | None:intergenic | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | + | chr6_2:8772159-8772178 | None:intergenic | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | + | chr6_2:8772357-8772376 | None:intergenic | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | - | chr6_2:8772384-8772403 | Msa0907910:CDS | 50.0% | |
| ATGGCGCGAAGAAGAATGCT+CGG | - | chr6_2:8772655-8772674 | Msa0907910:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | - | chr6_2:8772660-8772679 | Msa0907910:CDS | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | - | chr6_2:8772661-8772680 | Msa0907910:CDS | 50.0% | |
| ! | TAGCAGTGATGGTGATTGGC+GGG | - | chr6_2:8772755-8772774 | Msa0907910:CDS | 50.0% |
| GGTACCAAAGGGAGTAGGAT+GGG | - | chr6_2:8772777-8772796 | Msa0907910:CDS | 50.0% | |
| ! | AGAAGAAGAGGGGCTTTTGG+TGG | - | chr6_2:8772816-8772835 | Msa0907910:CDS | 50.0% |
| !! | GTGGTGGTGCTGATGTTGAA+AGG | - | chr6_2:8772838-8772857 | Msa0907910:CDS | 50.0% |
| ACCAATTGAGAGGCCTAGGA+GGG | - | chr6_2:8772863-8772882 | Msa0907910:CDS | 50.0% | |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | + | chr6_2:8772879-8772898 | None:intergenic | 50.0% |
| AGGAGGGGGGTTCAACAAAA+TGG | - | chr6_2:8772879-8772898 | Msa0907910:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | - | chr6_2:8772906-8772925 | Msa0907910:CDS | 50.0% | |
| !! | GAGAATGACAATGGTGGTGG+TGG | - | chr6_2:8772909-8772928 | Msa0907910:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | - | chr6_2:8772962-8772981 | Msa0907910:CDS | 50.0% |
| TGAAGCTGGTAAGAAGGCTG+TGG | - | chr6_2:8772995-8773014 | Msa0907910:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | - | chr6_2:8773070-8773089 | Msa0907910:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | - | chr6_2:8773089-8773108 | Msa0907910:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | - | chr6_2:8773100-8773119 | Msa0907910:CDS | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | - | chr6_2:8773101-8773120 | Msa0907910:CDS | 50.0% | |
| GTGAGACAGGGGAACGTAAA+CGG | - | chr6_2:8773113-8773132 | Msa0907910:CDS | 50.0% | |
| TGAGACAGGGGAACGTAAAC+GGG | - | chr6_2:8773114-8773133 | Msa0907910:CDS | 50.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | - | chr6_2:8771665-8771684 | Msa0907910:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | + | chr6_2:8771771-8771790 | None:intergenic | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | + | chr6_2:8771921-8771940 | None:intergenic | 50.0% | |
| !! | AAGCAAACGGGTTACGGTTC+GGG | + | chr6_2:8771942-8771961 | None:intergenic | 50.0% |
| ATAGGTTGCGGTTGTTGCTG+TGG | + | chr6_2:8772108-8772127 | None:intergenic | 50.0% | |
| AAATGCTGTGGTTGCGGTTG+TGG | + | chr6_2:8772147-8772166 | None:intergenic | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | + | chr6_2:8772159-8772178 | None:intergenic | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | + | chr6_2:8772357-8772376 | None:intergenic | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | - | chr6_2:8772384-8772403 | Msa0907910:CDS | 50.0% | |
| ATGGCGCGAAGAAGAATGCT+CGG | - | chr6_2:8772655-8772674 | Msa0907910:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | - | chr6_2:8772660-8772679 | Msa0907910:CDS | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | - | chr6_2:8772661-8772680 | Msa0907910:CDS | 50.0% | |
| ! | TAGCAGTGATGGTGATTGGC+GGG | - | chr6_2:8772755-8772774 | Msa0907910:CDS | 50.0% |
| GGTACCAAAGGGAGTAGGAT+GGG | - | chr6_2:8772777-8772796 | Msa0907910:CDS | 50.0% | |
| ! | AGAAGAAGAGGGGCTTTTGG+TGG | - | chr6_2:8772816-8772835 | Msa0907910:CDS | 50.0% |
| !! | GTGGTGGTGCTGATGTTGAA+AGG | - | chr6_2:8772838-8772857 | Msa0907910:CDS | 50.0% |
| ACCAATTGAGAGGCCTAGGA+GGG | - | chr6_2:8772863-8772882 | Msa0907910:CDS | 50.0% | |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | + | chr6_2:8772879-8772898 | None:intergenic | 50.0% |
| AGGAGGGGGGTTCAACAAAA+TGG | - | chr6_2:8772879-8772898 | Msa0907910:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | - | chr6_2:8772906-8772925 | Msa0907910:CDS | 50.0% | |
| !! | GAGAATGACAATGGTGGTGG+TGG | - | chr6_2:8772909-8772928 | Msa0907910:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | - | chr6_2:8772962-8772981 | Msa0907910:CDS | 50.0% |
| TGAAGCTGGTAAGAAGGCTG+TGG | - | chr6_2:8772995-8773014 | Msa0907910:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | - | chr6_2:8773070-8773089 | Msa0907910:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | - | chr6_2:8773089-8773108 | Msa0907910:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | - | chr6_2:8773100-8773119 | Msa0907910:CDS | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | - | chr6_2:8773101-8773120 | Msa0907910:CDS | 50.0% | |
| GTGAGACAGGGGAACGTAAA+CGG | - | chr6_2:8773113-8773132 | Msa0907910:CDS | 50.0% | |
| TGAGACAGGGGAACGTAAAC+GGG | - | chr6_2:8773114-8773133 | Msa0907910:CDS | 50.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | + | chr6_2:8771743-8771762 | None:intergenic | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | + | chr6_2:8771749-8771768 | None:intergenic | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | + | chr6_2:8771767-8771786 | None:intergenic | 55.0% | |
| TGTTGCTGTGGATGTGGTGG+TGG | + | chr6_2:8772096-8772115 | None:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | + | chr6_2:8772099-8772118 | None:intergenic | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | + | chr6_2:8772102-8772121 | None:intergenic | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | + | chr6_2:8772138-8772157 | None:intergenic | 55.0% | |
| CTGATGAGTCTACTGGGCCT+AGG | - | chr6_2:8772304-8772323 | Msa0907910:CDS | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | - | chr6_2:8772348-8772367 | Msa0907910:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | - | chr6_2:8772507-8772526 | Msa0907910:CDS | 55.0% | |
| CGCGAAGAAGAATGCTCGGA+AGG | - | chr6_2:8772659-8772678 | Msa0907910:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | - | chr6_2:8772704-8772723 | Msa0907910:CDS | 55.0% | |
| ! | AGCAGTGATGGTGATTGGCG+GGG | - | chr6_2:8772756-8772775 | Msa0907910:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | - | chr6_2:8772766-8772785 | Msa0907910:CDS | 55.0% |
| GGGTACCAAAGGGAGTAGGA+TGG | - | chr6_2:8772776-8772795 | Msa0907910:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | + | chr6_2:8772784-8772803 | None:intergenic | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | - | chr6_2:8772781-8772800 | Msa0907910:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | - | chr6_2:8772787-8772806 | Msa0907910:CDS | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | - | chr6_2:8772790-8772809 | Msa0907910:CDS | 55.0% | |
| ! | AGAAGAGGGGCTTTTGGTGG+TGG | - | chr6_2:8772819-8772838 | Msa0907910:CDS | 55.0% |
| GGAGACCAATTGAGAGGCCT+AGG | - | chr6_2:8772859-8772878 | Msa0907910:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | - | chr6_2:8772862-8772881 | Msa0907910:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | - | chr6_2:8772864-8772883 | Msa0907910:CDS | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | - | chr6_2:8772865-8772884 | Msa0907910:CDS | 55.0% | |
| AATTGAGAGGCCTAGGAGGG+GGG | - | chr6_2:8772866-8772885 | Msa0907910:CDS | 55.0% | |
| !! | TGGTGGTGGTGGTGACAATG+TGG | - | chr6_2:8772920-8772939 | Msa0907910:CDS | 55.0% |
| AGCTGGTAAGAAGGCTGTGG+TGG | - | chr6_2:8772998-8773017 | Msa0907910:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | - | chr6_2:8772999-8773018 | Msa0907910:CDS | 55.0% | |
| CTGCTAGTGGAGTGAGACAG+GGG | - | chr6_2:8773102-8773121 | Msa0907910:CDS | 55.0% | |
| AGGGGAACGTAAACGGGACA+GGG | - | chr6_2:8773120-8773139 | Msa0907910:CDS | 55.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | + | chr6_2:8771743-8771762 | None:intergenic | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | + | chr6_2:8771749-8771768 | None:intergenic | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | + | chr6_2:8771767-8771786 | None:intergenic | 55.0% | |
| TGTTGCTGTGGATGTGGTGG+TGG | + | chr6_2:8772096-8772115 | None:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | + | chr6_2:8772099-8772118 | None:intergenic | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | + | chr6_2:8772102-8772121 | None:intergenic | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | + | chr6_2:8772138-8772157 | None:intergenic | 55.0% | |
| CTGATGAGTCTACTGGGCCT+AGG | - | chr6_2:8772304-8772323 | Msa0907910:CDS | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | - | chr6_2:8772348-8772367 | Msa0907910:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | - | chr6_2:8772507-8772526 | Msa0907910:CDS | 55.0% | |
| CGCGAAGAAGAATGCTCGGA+AGG | - | chr6_2:8772659-8772678 | Msa0907910:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | - | chr6_2:8772704-8772723 | Msa0907910:CDS | 55.0% | |
| ! | AGCAGTGATGGTGATTGGCG+GGG | - | chr6_2:8772756-8772775 | Msa0907910:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | - | chr6_2:8772766-8772785 | Msa0907910:CDS | 55.0% |
| GGGTACCAAAGGGAGTAGGA+TGG | - | chr6_2:8772776-8772795 | Msa0907910:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | + | chr6_2:8772784-8772803 | None:intergenic | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | - | chr6_2:8772781-8772800 | Msa0907910:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | - | chr6_2:8772787-8772806 | Msa0907910:CDS | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | - | chr6_2:8772790-8772809 | Msa0907910:CDS | 55.0% | |
| ! | AGAAGAGGGGCTTTTGGTGG+TGG | - | chr6_2:8772819-8772838 | Msa0907910:CDS | 55.0% |
| GGAGACCAATTGAGAGGCCT+AGG | - | chr6_2:8772859-8772878 | Msa0907910:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | - | chr6_2:8772862-8772881 | Msa0907910:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | - | chr6_2:8772864-8772883 | Msa0907910:CDS | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | - | chr6_2:8772865-8772884 | Msa0907910:CDS | 55.0% | |
| AATTGAGAGGCCTAGGAGGG+GGG | - | chr6_2:8772866-8772885 | Msa0907910:CDS | 55.0% | |
| !! | TGGTGGTGGTGGTGACAATG+TGG | - | chr6_2:8772920-8772939 | Msa0907910:CDS | 55.0% |
| AGCTGGTAAGAAGGCTGTGG+TGG | - | chr6_2:8772998-8773017 | Msa0907910:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | - | chr6_2:8772999-8773018 | Msa0907910:CDS | 55.0% | |
| CTGCTAGTGGAGTGAGACAG+GGG | - | chr6_2:8773102-8773121 | Msa0907910:CDS | 55.0% | |
| AGGGGAACGTAAACGGGACA+GGG | - | chr6_2:8773120-8773139 | Msa0907910:CDS | 55.0% | |
| ACGCGCGCTGAGGAGTTTGT+TGG | + | chr6_2:8771701-8771720 | None:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | - | chr6_2:8771709-8771728 | Msa0907910:CDS | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | + | chr6_2:8771737-8771756 | None:intergenic | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | + | chr6_2:8771738-8771757 | None:intergenic | 60.0% | |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | + | chr6_2:8771933-8771952 | None:intergenic | 60.0% |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | + | chr6_2:8771936-8771955 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTTGTGGTTG+CGG | + | chr6_2:8772078-8772097 | None:intergenic | 60.0% |
| !! | TGTGGTGGTGGTGGTGGTTG+TGG | + | chr6_2:8772084-8772103 | None:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | + | chr6_2:8772090-8772109 | None:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | + | chr6_2:8772093-8772112 | None:intergenic | 60.0% |
| TGCTGTGGTTGCGGTTGTGG+TGG | + | chr6_2:8772144-8772163 | None:intergenic | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | - | chr6_2:8772479-8772498 | Msa0907910:CDS | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | + | chr6_2:8772498-8772517 | None:intergenic | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | + | chr6_2:8772501-8772520 | None:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | - | chr6_2:8772498-8772517 | Msa0907910:CDS | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | - | chr6_2:8772506-8772525 | Msa0907910:CDS | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | - | chr6_2:8772512-8772531 | Msa0907910:CDS | 60.0% | |
| ! | GGTGATTGGCGGGGTACCAA+AGG | - | chr6_2:8772765-8772784 | Msa0907910:CDS | 60.0% |
| !!! | AGAGGGGCTTTTGGTGGTGG+TGG | - | chr6_2:8772822-8772841 | Msa0907910:CDS | 60.0% |
| CCCCTCCTAGGCCTCTCAAT+TGG | + | chr6_2:8772867-8772886 | None:intergenic | 60.0% | |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | - | chr6_2:8773002-8773021 | Msa0907910:CDS | 60.0% |
| !! | CTGTGGTGGGTGGTTCGAGA+AGG | - | chr6_2:8773012-8773031 | Msa0907910:CDS | 60.0% |
| GTGGGTGGTTCGAGAAGGAG+AGG | - | chr6_2:8773017-8773036 | Msa0907910:CDS | 60.0% | |
| ! | GGTTCGAGAAGGAGAGGTGC+TGG | - | chr6_2:8773023-8773042 | Msa0907910:CDS | 60.0% |
| CAGGGGAACGTAAACGGGAC+AGG | - | chr6_2:8773119-8773138 | Msa0907910:CDS | 60.0% | |
| AAACGGGACAGGGAATGCCG+AGG | - | chr6_2:8773130-8773149 | Msa0907910:CDS | 60.0% | |
| ACGCGCGCTGAGGAGTTTGT+TGG | + | chr6_2:8771701-8771720 | None:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | - | chr6_2:8771709-8771728 | Msa0907910:CDS | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | + | chr6_2:8771737-8771756 | None:intergenic | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | + | chr6_2:8771738-8771757 | None:intergenic | 60.0% | |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | + | chr6_2:8771933-8771952 | None:intergenic | 60.0% |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | + | chr6_2:8771936-8771955 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTTGTGGTTG+CGG | + | chr6_2:8772078-8772097 | None:intergenic | 60.0% |
| !! | TGTGGTGGTGGTGGTGGTTG+TGG | + | chr6_2:8772084-8772103 | None:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | + | chr6_2:8772090-8772109 | None:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | + | chr6_2:8772093-8772112 | None:intergenic | 60.0% |
| TGCTGTGGTTGCGGTTGTGG+TGG | + | chr6_2:8772144-8772163 | None:intergenic | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | - | chr6_2:8772479-8772498 | Msa0907910:CDS | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | + | chr6_2:8772498-8772517 | None:intergenic | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | + | chr6_2:8772501-8772520 | None:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | - | chr6_2:8772498-8772517 | Msa0907910:CDS | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | - | chr6_2:8772506-8772525 | Msa0907910:CDS | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | - | chr6_2:8772512-8772531 | Msa0907910:CDS | 60.0% | |
| ! | GGTGATTGGCGGGGTACCAA+AGG | - | chr6_2:8772765-8772784 | Msa0907910:CDS | 60.0% |
| !!! | AGAGGGGCTTTTGGTGGTGG+TGG | - | chr6_2:8772822-8772841 | Msa0907910:CDS | 60.0% |
| CCCCTCCTAGGCCTCTCAAT+TGG | + | chr6_2:8772867-8772886 | None:intergenic | 60.0% | |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | - | chr6_2:8773002-8773021 | Msa0907910:CDS | 60.0% |
| !! | CTGTGGTGGGTGGTTCGAGA+AGG | - | chr6_2:8773012-8773031 | Msa0907910:CDS | 60.0% |
| GTGGGTGGTTCGAGAAGGAG+AGG | - | chr6_2:8773017-8773036 | Msa0907910:CDS | 60.0% | |
| ! | GGTTCGAGAAGGAGAGGTGC+TGG | - | chr6_2:8773023-8773042 | Msa0907910:CDS | 60.0% |
| CAGGGGAACGTAAACGGGAC+AGG | - | chr6_2:8773119-8773138 | Msa0907910:CDS | 60.0% | |
| AAACGGGACAGGGAATGCCG+AGG | - | chr6_2:8773130-8773149 | Msa0907910:CDS | 60.0% | |
| CGTGTAAGTCACGCGCGCTG+AGG | + | chr6_2:8771711-8771730 | None:intergenic | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | - | chr6_2:8771731-8771750 | Msa0907910:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | - | chr6_2:8771732-8771751 | Msa0907910:CDS | 65.0% | |
| ! | GGTGGTGGTTGTGGTTGCGG+CGG | + | chr6_2:8772075-8772094 | None:intergenic | 65.0% |
| AGTCTACTGGGCCTAGGCCC+AGG | - | chr6_2:8772310-8772329 | Msa0907910:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | + | chr6_2:8772336-8772355 | None:intergenic | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | - | chr6_2:8772336-8772355 | Msa0907910:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | - | chr6_2:8772516-8772535 | Msa0907910:CDS | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | - | chr6_2:8772519-8772538 | Msa0907910:CDS | 65.0% | |
| AAGCTCCGCGAACGCTGCAC+AGG | + | chr6_2:8772712-8772731 | None:intergenic | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | - | chr6_2:8772772-8772791 | Msa0907910:CDS | 65.0% |
| CGTGTAAGTCACGCGCGCTG+AGG | + | chr6_2:8771711-8771730 | None:intergenic | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | - | chr6_2:8771731-8771750 | Msa0907910:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | - | chr6_2:8771732-8771751 | Msa0907910:CDS | 65.0% | |
| ! | GGTGGTGGTTGTGGTTGCGG+CGG | + | chr6_2:8772075-8772094 | None:intergenic | 65.0% |
| AGTCTACTGGGCCTAGGCCC+AGG | - | chr6_2:8772310-8772329 | Msa0907910:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | + | chr6_2:8772336-8772355 | None:intergenic | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | - | chr6_2:8772336-8772355 | Msa0907910:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | - | chr6_2:8772516-8772535 | Msa0907910:CDS | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | - | chr6_2:8772519-8772538 | Msa0907910:CDS | 65.0% | |
| AAGCTCCGCGAACGCTGCAC+AGG | + | chr6_2:8772712-8772731 | None:intergenic | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | - | chr6_2:8772772-8772791 | Msa0907910:CDS | 65.0% |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | + | chr6_2:8772066-8772085 | None:intergenic | 70.0% |
| GGTTGTGGTTGCGGCGGTGG+TGG | + | chr6_2:8772069-8772088 | None:intergenic | 70.0% | |
| GGTGGTTGTGGTTGCGGCGG+TGG | + | chr6_2:8772072-8772091 | None:intergenic | 70.0% | |
| TACTGGGCCTAGGCCCAGGC+CGG | - | chr6_2:8772314-8772333 | Msa0907910:CDS | 70.0% | |
| GGTAGTACGGGCACCACCGG+AGG | - | chr6_2:8772482-8772501 | Msa0907910:CDS | 70.0% | |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | + | chr6_2:8772066-8772085 | None:intergenic | 70.0% |
| GGTTGTGGTTGCGGCGGTGG+TGG | + | chr6_2:8772069-8772088 | None:intergenic | 70.0% | |
| GGTGGTTGTGGTTGCGGCGG+TGG | + | chr6_2:8772072-8772091 | None:intergenic | 70.0% | |
| TACTGGGCCTAGGCCCAGGC+CGG | - | chr6_2:8772314-8772333 | Msa0907910:CDS | 70.0% | |
| GGTAGTACGGGCACCACCGG+AGG | - | chr6_2:8772482-8772501 | Msa0907910:CDS | 70.0% | |
| GCAGACTCCGGCCTGGGCCT+AGG | + | chr6_2:8772324-8772343 | None:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | - | chr6_2:8772324-8772343 | Msa0907910:CDS | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | - | chr6_2:8772325-8772344 | Msa0907910:CDS | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | - | chr6_2:8772326-8772345 | Msa0907910:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | + | chr6_2:8772330-8772349 | None:intergenic | 75.0% | |
| AGCCCCAGCAGACTCCGGCC+TGG | + | chr6_2:8772331-8772350 | None:intergenic | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | - | chr6_2:8772489-8772508 | Msa0907910:CDS | 75.0% | |
| GCAGACTCCGGCCTGGGCCT+AGG | + | chr6_2:8772324-8772343 | None:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | - | chr6_2:8772324-8772343 | Msa0907910:CDS | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | - | chr6_2:8772325-8772344 | Msa0907910:CDS | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | - | chr6_2:8772326-8772345 | Msa0907910:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | + | chr6_2:8772330-8772349 | None:intergenic | 75.0% | |
| AGCCCCAGCAGACTCCGGCC+TGG | + | chr6_2:8772331-8772350 | None:intergenic | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | - | chr6_2:8772489-8772508 | Msa0907910:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 8771652 | 8773253 | 8771652 | ID=Msa0907910;Name=Msa0907910 |
| chr6_2 | mRNA | 8771652 | 8773253 | 8771652 | ID=Msa0907910-mRNA-1;Parent=Msa0907910;Name=Msa0907910-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|-1|0|1|-1|1|1|0|533 |
| chr6_2 | exon | 8771652 | 8773253 | 8771652 | ID=Msa0907910-mRNA-1:exon:2107;Parent=Msa0907910-mRNA-1 |
| chr6_2 | CDS | 8771652 | 8773253 | 8771652 | ID=Msa0907910-mRNA-1:cds;Parent=Msa0907910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
