AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1223470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223470 MtrunA17_Chr4g0075031 98.081 521 10 0 1 521 1 521 0.0 1053
Msa1223470 MtrunA17_Chr5g0434591 60.230 435 173 0 40 474 18 452 0.0 562
Msa1223470 MtrunA17_Chr1g0161011 59.333 450 177 2 44 487 23 472 0.0 561
Msa1223470 MtrunA17_Chr3g0110371 56.782 435 188 0 40 474 19 453 0.0 527
Msa1223470 MtrunA17_Chr8g0378621 53.380 429 199 1 42 469 23 451 2.91e-167 483
Msa1223470 MtrunA17_Chr3g0121271 50.577 433 211 2 42 473 23 453 1.20e-159 463
Msa1223470 MtrunA17_Chr8g0389741 40.412 485 269 6 42 518 25 497 7.70e-126 377
Msa1223470 MtrunA17_Chr6g0487261 40.618 453 255 5 42 485 24 471 5.65e-117 354
Msa1223470 MtrunA17_Chr5g0439251 41.458 439 231 5 45 460 25 460 4.74e-116 351
Msa1223470 MtrunA17_Chr1g0177171 38.293 457 245 5 45 467 38 491 4.08e-111 339
Msa1223470 MtrunA17_Chr7g0234821 38.073 436 253 7 46 467 27 459 1.08e-93 293
Msa1223470 MtrunA17_Chr8g0339191 36.721 433 260 6 46 467 30 459 4.85e-92 288
Msa1223470 MtrunA17_Chr4g0034901 35.469 437 265 4 44 467 28 460 4.55e-89 281
Msa1223470 MtrunA17_Chr4g0046311 36.490 433 254 7 45 460 23 451 2.85e-87 276
Msa1223470 MtrunA17_Chr4g0043511 35.833 480 270 12 45 494 62 533 2.92e-87 279
Msa1223470 MtrunA17_Chr7g0223961 35.763 439 250 11 45 465 23 447 2.90e-84 268
Msa1223470 MtrunA17_Chr3g0119541 42.547 322 181 3 42 362 23 341 3.60e-83 262
Msa1223470 MtrunA17_Chr3g0144531 34.101 434 273 4 44 468 27 456 4.48e-83 265
Msa1223470 MtrunA17_Chr4g0043851 39.144 327 194 3 45 370 32 354 1.25e-75 244
Msa1223470 MtrunA17_Chr1g0189111 40.432 324 187 4 45 367 31 349 5.43e-73 238
Msa1223470 MtrunA17_Chr4g0003281 37.538 325 199 2 46 369 41 362 1.14e-72 236
Msa1223470 MtrunA17_Chr4g0064021 38.154 325 197 2 46 369 27 348 4.82e-72 234
Msa1223470 MtrunA17_Chr2g0321511 38.462 325 193 3 39 362 23 341 8.22e-72 234
Msa1223470 MtrunA17_Chr4g0026321 37.462 331 202 3 39 368 23 349 8.70e-72 233
Msa1223470 MtrunA17_Chr1g0146831 40.498 321 180 6 45 362 31 343 7.12e-70 228
Msa1223470 MtrunA17_Chr2g0285901 39.441 322 189 4 42 362 21 337 3.11e-68 224
Msa1223470 MtrunA17_Chr1g0155001 36.449 321 201 2 43 362 22 340 2.16e-63 213
Msa1223470 MtrunA17_Chr7g0250301 35.312 320 196 6 45 364 8 316 1.57e-62 207
Msa1223470 MtrunA17_Chr2g0290821 31.954 435 271 13 45 466 28 450 6.37e-58 200
Msa1223470 MtrunA17_Chr4g0062771 29.278 485 291 17 2 467 6 457 1.77e-55 193
Msa1223470 MtrunA17_Chr2g0294601 35.474 327 196 8 45 368 59 373 3.64e-55 190
Msa1223470 MtrunA17_Chr4g0039011 33.538 325 201 5 45 369 42 351 1.99e-54 187
Msa1223470 MtrunA17_Chr4g0039071 32.258 310 201 3 45 354 25 325 1.08e-53 186
Msa1223470 MtrunA17_Chr3g0138741 30.524 439 273 15 45 466 31 454 1.29e-53 188
Msa1223470 MtrunA17_Chr2g0294591 34.969 326 199 7 45 368 30 344 1.31e-53 185
Msa1223470 MtrunA17_Chr4g0076581 30.839 441 269 14 45 466 33 456 7.02e-53 186
Msa1223470 MtrunA17_Chr8g0383311 29.385 439 284 13 43 467 41 467 1.80e-52 186
Msa1223470 MtrunA17_Chr4g0038941 33.750 320 196 6 45 364 52 355 2.17e-52 181
Msa1223470 MtrunA17_Chr4g0038961 34.268 321 193 7 45 364 23 326 4.41e-52 180
Msa1223470 MtrunA17_Chr4g0039021 33.101 287 180 3 69 354 4 279 7.15e-52 178
Msa1223470 MtrunA17_Chr4g0038971 33.019 318 197 6 45 362 23 324 9.84e-52 179
Msa1223470 MtrunA17_Chr4g0038981 33.333 318 196 6 45 362 23 324 2.97e-51 177
Msa1223470 MtrunA17_Chr2g0306311 28.421 475 268 14 44 467 29 482 9.18e-51 181
Msa1223470 MtrunA17_Chr1g0148391 29.655 435 281 14 45 466 26 448 6.10e-50 178
Msa1223470 MtrunA17_Chr4g0069801 28.132 423 270 14 62 466 45 451 1.21e-48 175
Msa1223470 MtrunA17_Chr6g0461601 30.248 443 273 17 45 466 26 453 6.07e-48 173
Msa1223470 MtrunA17_Chr7g0253091 29.478 441 276 16 45 466 26 450 7.88e-48 172
Msa1223470 MtrunA17_Chr3g0129341 29.157 439 283 15 43 467 32 456 1.27e-47 172
Msa1223470 MtrunA17_Chr3g0105981 29.577 426 259 14 45 451 27 430 4.02e-47 169
Msa1223470 MtrunA17_Chr1g0174261 33.096 281 179 4 74 354 1 272 5.67e-47 167
Msa1223470 MtrunA17_Chr7g0250321 33.829 269 168 5 45 313 28 286 7.92e-46 162
Msa1223470 MtrunA17_Chr5g0436361 34.915 295 182 7 70 362 62 348 3.85e-45 162
Msa1223470 MtrunA17_Chr5g0447651 51.724 87 42 0 380 466 28 114 5.12e-26 102
Msa1223470 MtrunA17_Chr8g0378361 45.794 107 50 2 363 469 18 116 8.02e-26 104
Msa1223470 MtrunA17_Chr3g0096451 50.549 91 44 1 377 467 107 196 4.92e-25 104
Msa1223470 MtrunA17_Chr8g0378381 48.864 88 44 1 380 467 30 116 7.14e-25 99.4
Msa1223470 MtrunA17_Chr5g0443331 43.750 112 58 2 377 488 103 209 2.20e-24 102
Msa1223470 MtrunA17_Chr8g0381081 49.451 91 44 1 381 469 56 146 1.36e-23 97.8
Msa1223470 MtrunA17_Chr2g0304061 54.348 92 40 2 382 473 158 247 1.87e-23 101
Msa1223470 MtrunA17_Chr8g0378371 52.222 90 39 2 380 469 31 116 2.08e-23 95.1
Msa1223470 MtrunA17_Chr4g0076131 51.765 85 41 0 382 466 28 112 2.71e-23 95.1
Msa1223470 MtrunA17_Chr7g0271411 53.488 86 39 1 382 467 160 244 1.04e-22 98.6
Msa1223470 MtrunA17_Chr1g0193131 54.217 83 36 2 380 462 418 498 1.29e-22 101
Msa1223470 MtrunA17_Chr4g0040911 44.330 97 54 0 380 476 35 131 2.95e-22 94.0
Msa1223470 MtrunA17_Chr8g0378401 50.000 82 40 1 379 460 29 109 5.14e-22 91.3
Msa1223470 MtrunA17_Chr2g0294581 36.923 130 80 1 45 172 76 205 2.26e-21 94.4
Msa1223470 MtrunA17_Chr5g0419121 46.667 90 45 2 382 469 22 110 3.47e-21 93.2
Msa1223470 MtrunA17_Chr4g0043151 49.438 89 43 2 382 469 21 108 5.78e-21 90.9
Msa1223470 MtrunA17_Chr5g0401301 47.727 88 45 1 380 466 327 414 1.84e-20 94.0
Msa1223470 MtrunA17_Chr3g0120401 45.882 85 45 1 382 466 157 240 3.48e-20 90.1
Msa1223470 MtrunA17_Chr1g0154991 40.860 93 54 1 378 470 16 107 6.51e-19 82.4
Msa1223470 MtrunA17_Chr8g0380231 56.716 67 28 1 394 460 29 94 1.07e-18 81.6
Msa1223470 MtrunA17_Chr4g0061401 43.820 89 48 2 378 466 20 106 1.62e-18 84.3
Msa1223470 MtrunA17_Chr4g0076141 46.835 79 42 0 382 460 13 91 3.60e-18 79.7
Msa1223470 MtrunA17_Chr1g0213651 40.000 85 50 1 382 466 276 359 1.27e-16 81.6
Msa1223470 MtrunA17_Chr2g0313891 37.647 85 51 1 380 464 28 110 4.61e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223470 AT1G11820.2 81.278 454 84 1 37 490 36 488 0.0 793
Msa1223470 AT1G11820.3 82.311 424 75 0 37 460 36 459 0.0 754
Msa1223470 AT1G11820.1 80.299 335 66 0 37 371 36 370 0.0 572
Msa1223470 AT2G01630.1 56.667 450 191 1 44 489 22 471 0.0 545
Msa1223470 AT1G66250.1 54.167 480 206 3 40 506 27 505 0.0 545
Msa1223470 AT2G01630.3 58.753 417 172 0 44 460 22 438 0.0 528
Msa1223470 AT2G01630.2 57.493 367 156 0 44 410 22 388 2.12e-154 446
Msa1223470 AT3G13560.4 50.465 430 212 1 44 473 25 453 5.21e-151 442
Msa1223470 AT3G13560.1 50.465 430 212 1 44 473 25 453 5.21e-151 442
Msa1223470 AT3G13560.2 50.465 430 212 1 44 473 25 453 5.21e-151 442
Msa1223470 AT3G13560.5 50.465 430 212 1 44 473 25 453 5.21e-151 442
Msa1223470 AT3G13560.3 50.465 430 212 1 44 473 25 453 5.21e-151 442
Msa1223470 AT2G05790.1 41.295 448 235 5 45 467 25 469 8.95e-121 363
Msa1223470 AT5G55180.1 38.391 435 254 3 44 467 26 457 2.08e-109 333
Msa1223470 AT5G56590.1 37.267 483 278 8 42 514 23 490 1.22e-108 333
Msa1223470 AT4G29360.1 39.381 452 241 2 45 466 27 475 4.33e-107 330
Msa1223470 AT4G29360.2 39.381 452 241 2 45 466 37 485 7.30e-107 330
Msa1223470 AT4G26830.2 38.568 433 253 4 44 467 28 456 1.81e-106 326
Msa1223470 AT4G26830.1 38.657 432 252 4 45 467 25 452 3.60e-106 325
Msa1223470 AT5G55180.2 37.995 429 252 3 44 461 26 451 2.88e-104 320
Msa1223470 AT4G34480.1 38.695 429 255 4 43 467 24 448 2.33e-95 299
Msa1223470 AT5G24318.1 36.250 480 262 11 5 466 2 455 2.43e-93 292
Msa1223470 AT3G55430.1 38.479 434 242 13 45 466 29 449 5.52e-93 291
Msa1223470 AT2G16230.1 35.597 486 298 7 44 520 24 503 1.83e-92 291
Msa1223470 AT5G24318.2 36.076 474 259 11 5 460 2 449 1.63e-89 282
Msa1223470 AT3G23770.1 36.818 440 257 6 45 467 37 472 3.21e-88 280
Msa1223470 AT4G14080.1 35.021 474 289 8 8 467 6 474 1.58e-86 275
Msa1223470 AT3G07320.1 36.782 435 258 8 46 467 26 456 3.38e-86 274
Msa1223470 AT2G26600.1 39.130 322 189 3 37 354 23 341 6.83e-77 247
Msa1223470 AT2G39640.1 35.748 428 256 12 45 467 30 443 2.34e-76 251
Msa1223470 AT2G39640.1 36.364 88 55 1 382 469 460 546 5.03e-15 78.2
Msa1223470 AT1G32860.1 41.176 323 183 4 45 364 29 347 1.68e-74 242
Msa1223470 AT2G27500.2 37.500 336 198 3 38 368 22 350 5.38e-74 239
Msa1223470 AT2G27500.1 37.500 336 198 3 38 368 22 350 1.70e-73 238
Msa1223470 AT5G24318.3 39.077 325 177 6 154 466 1 316 2.67e-72 233
Msa1223470 AT4G34480.3 39.233 339 198 4 133 467 3 337 1.39e-71 233
Msa1223470 AT5G42100.1 38.037 326 194 5 45 366 27 348 5.07e-69 228
Msa1223470 AT4G18340.2 37.651 332 202 3 45 375 34 361 8.12e-69 226
Msa1223470 AT5G42100.2 38.037 326 194 5 45 366 27 348 9.27e-69 227
Msa1223470 AT4G18340.1 37.651 332 202 3 45 375 34 361 3.30e-68 225
Msa1223470 AT3G15800.1 36.503 326 202 3 46 369 44 366 6.29e-68 224
Msa1223470 AT1G30080.2 37.654 324 197 3 40 362 31 350 6.76e-68 224
Msa1223470 AT1G30080.1 37.654 324 197 3 40 362 31 350 1.37e-67 223
Msa1223470 AT5G24318.4 36.986 365 199 8 5 362 2 342 4.31e-67 221
Msa1223470 AT3G61810.1 35.121 373 227 6 1 367 9 372 3.18e-66 219
Msa1223470 AT4G34480.2 38.006 321 195 2 43 362 24 341 2.35e-63 211
Msa1223470 AT5G42720.1 36.646 322 199 4 43 362 24 342 6.00e-62 209
Msa1223470 AT2G26600.2 40.964 249 142 3 108 354 2 247 6.27e-61 202
Msa1223470 AT2G27500.3 38.710 279 159 3 95 368 1 272 2.18e-60 202
Msa1223470 AT3G57270.1 35.404 322 197 6 42 362 24 335 8.00e-59 198
Msa1223470 AT3G46570.1 39.938 323 180 9 45 362 27 340 2.52e-56 192
Msa1223470 AT4G16260.1 35.443 316 193 6 42 357 21 325 2.12e-55 189
Msa1223470 AT3G24330.1 30.549 455 276 16 45 477 39 475 7.85e-55 192
Msa1223470 AT4G16260.2 35.644 303 184 6 55 357 5 296 1.76e-54 186
Msa1223470 AT4G17180.1 32.184 435 263 15 45 466 25 440 2.21e-54 190
Msa1223470 AT2G19440.2 30.752 439 274 15 45 467 21 445 6.83e-54 189
Msa1223470 AT2G19440.1 30.752 439 274 15 45 467 21 445 6.83e-54 189
Msa1223470 AT3G57260.1 35.535 318 190 6 45 362 32 334 7.70e-54 185
Msa1223470 AT3G57260.2 35.535 318 190 6 45 362 48 350 9.58e-54 186
Msa1223470 AT4G31140.1 30.115 435 278 15 45 466 27 448 1.23e-51 183
Msa1223470 AT5G64790.1 27.918 437 289 13 45 467 28 452 1.57e-51 183
Msa1223470 AT5G20870.1 27.505 469 310 15 45 495 30 486 2.29e-51 183
Msa1223470 AT5G18220.1 29.705 441 278 15 45 467 30 456 1.95e-50 180
Msa1223470 AT1G64760.1 29.613 439 279 13 45 467 25 449 1.96e-50 180
Msa1223470 AT1G64760.2 29.613 439 279 13 45 467 25 449 1.96e-50 180
Msa1223470 AT5G58480.1 29.425 435 278 12 45 466 26 444 6.32e-50 178
Msa1223470 AT5G58090.1 27.828 442 293 14 40 467 17 446 5.63e-49 176
Msa1223470 AT5G20340.1 34.056 323 198 8 45 364 43 353 1.52e-48 171
Msa1223470 AT5G20330.1 33.746 323 199 8 45 364 34 344 1.70e-48 171
Msa1223470 AT3G57240.1 33.333 321 198 8 45 365 35 339 1.70e-48 171
Msa1223470 AT5G20390.1 34.084 311 193 6 45 354 33 332 3.60e-48 170
Msa1223470 AT3G55780.1 35.314 303 187 7 71 370 61 357 4.80e-48 171
Msa1223470 AT3G04010.1 28.571 441 282 15 45 467 33 458 9.86e-47 170
Msa1223470 AT1G77780.1 31.250 320 207 6 44 362 23 330 1.88e-45 163
Msa1223470 AT1G33220.1 33.333 300 187 6 45 342 34 322 3.87e-45 162
Msa1223470 AT5G20560.1 30.769 299 197 5 45 342 34 323 5.02e-41 151
Msa1223470 AT1G77790.1 29.538 325 217 7 42 364 27 341 3.12e-38 143
Msa1223470 AT5G35740.1 50.538 93 45 1 375 466 23 115 1.70e-27 107
Msa1223470 AT2G30933.1 50.485 103 47 2 379 478 79 180 3.57e-27 109
Msa1223470 AT4G13600.1 53.409 88 40 1 382 469 61 147 1.23e-25 105
Msa1223470 AT2G04910.2 50.588 85 42 0 382 466 15 99 1.39e-25 101
Msa1223470 AT5G67460.1 51.765 85 41 0 382 466 293 377 5.13e-24 104
Msa1223470 AT4G05430.1 46.154 91 49 0 381 471 22 112 5.81e-24 98.2
Msa1223470 AT4G05430.3 46.154 91 49 0 381 471 47 137 9.52e-24 98.2
Msa1223470 AT1G29380.1 54.023 87 35 2 382 466 148 231 1.43e-23 101
Msa1223470 AT1G29380.3 54.023 87 35 2 382 466 148 231 1.58e-23 100
Msa1223470 AT5G61130.1 47.126 87 45 1 381 467 20 105 1.81e-23 98.6
Msa1223470 AT2G30933.2 52.439 82 38 1 379 460 79 159 4.52e-23 96.3
Msa1223470 AT2G30933.3 52.439 82 38 1 379 460 79 159 4.52e-23 96.3
Msa1223470 AT1G18650.2 44.565 92 50 1 378 469 17 107 1.45e-22 94.0
Msa1223470 AT1G18650.1 43.617 94 52 1 378 471 17 109 2.05e-22 95.1
Msa1223470 AT1G66870.2 33.582 134 71 2 333 466 22 137 3.92e-22 92.8
Msa1223470 AT5G67460.2 53.165 79 37 0 382 460 293 371 5.26e-22 98.2
Msa1223470 AT1G66870.1 35.965 114 62 1 353 466 8 110 5.96e-22 91.3
Msa1223470 AT2G04910.1 49.367 79 40 0 382 460 15 93 4.57e-21 89.4
Msa1223470 AT3G58100.1 38.947 95 58 0 380 474 39 133 6.80e-21 90.5
Msa1223470 AT1G09460.1 50.575 87 40 2 378 464 133 216 8.66e-21 94.0
Msa1223470 AT3G58100.2 38.947 95 58 0 380 474 115 209 1.18e-20 92.0
Msa1223470 AT1G29380.4 53.086 81 33 2 382 460 148 225 1.38e-20 91.3
Msa1223470 AT1G29380.2 53.086 81 33 2 382 460 148 225 1.38e-20 91.3
Msa1223470 AT4G05430.2 47.500 80 42 0 381 460 47 126 3.11e-20 87.0
Msa1223470 AT4G16165.1 35.965 114 62 1 353 466 8 110 5.70e-20 85.9
Msa1223470 AT1G66855.1 37.931 87 54 0 380 466 24 110 2.03e-19 84.3
Msa1223470 AT1G69295.1 46.512 86 44 2 378 463 17 100 5.38e-19 86.3
Msa1223470 AT5G63240.1 42.529 87 48 1 382 466 40 126 1.43e-18 82.4
Msa1223470 AT4G09462.1 41.573 89 51 1 378 466 25 112 2.36e-18 81.3
Msa1223470 AT5G63225.1 40.230 87 51 1 378 464 21 106 3.27e-18 80.9
Msa1223470 AT1G66852.1 39.080 87 52 1 380 466 24 109 3.37e-18 80.9
Msa1223470 AT1G69295.2 43.478 92 50 2 372 463 7 96 3.74e-18 84.0
Msa1223470 AT4G09465.1 40.449 89 52 1 378 466 27 114 5.64e-18 80.1
Msa1223470 AT4G09464.1 40.449 89 52 1 378 466 27 114 6.46e-18 80.1
Msa1223470 AT4G09467.1 40.449 89 52 1 378 466 27 114 6.46e-18 80.1
Msa1223470 AT5G08000.2 45.977 87 46 1 381 467 39 124 6.54e-18 83.2
Msa1223470 AT1G79480.1 41.573 89 51 1 378 466 307 394 9.57e-18 85.9
Msa1223470 AT5G08000.1 45.556 90 48 1 378 467 17 105 9.60e-18 82.0
Msa1223470 AT1G79480.2 41.573 89 51 1 378 466 306 393 1.07e-17 85.5
Msa1223470 AT5G63250.1 40.230 87 50 1 382 466 42 128 4.20e-17 78.2
Msa1223470 AT5G53610.1 39.326 89 52 1 378 466 24 110 1.09e-16 76.3
Msa1223470 AT2G43670.1 37.079 89 54 1 376 464 29 115 7.78e-16 74.3
Msa1223470 AT4G09466.1 38.202 89 54 1 378 466 27 114 7.97e-16 74.3
Msa1223470 AT5G53600.1 36.667 90 55 1 377 466 24 111 1.25e-15 73.6
Msa1223470 AT2G03505.3 39.759 83 49 1 378 460 17 98 2.40e-15 72.8
Msa1223470 AT2G03505.4 39.759 83 49 1 378 460 17 98 3.38e-15 73.9
Msa1223470 AT2G03505.1 39.759 83 49 1 378 460 17 98 3.38e-15 73.9
Msa1223470 AT2G03505.2 39.759 83 49 1 378 460 17 98 3.38e-15 73.9
Msa1223470 AT4G09090.1 36.471 85 53 1 382 466 31 114 7.23e-15 71.2
Msa1223470 AT1G13830.2 40.000 80 47 1 382 461 35 113 9.52e-15 73.9
Msa1223470 AT5G63230.1 37.079 89 55 1 378 466 22 109 1.02e-14 70.9
Msa1223470 AT1G13830.1 40.000 80 47 1 382 461 21 99 1.13e-14 73.2
Msa1223470 AT1G78520.1 32.110 109 72 1 358 466 8 114 1.47e-14 70.5
Msa1223470 AT2G43660.2 31.858 113 74 1 361 470 11 123 6.59e-14 68.9
Msa1223470 AT1G26450.1 41.558 77 43 2 378 454 17 91 7.38e-14 70.9
Msa1223470 AT2G29735.1 37.931 87 51 2 380 464 29 114 1.34e-12 65.1
Msa1223470 AT2G42930.1 46.970 66 33 2 396 461 54 117 2.40e-12 64.7
Msa1223470 AT2G43660.1 31.858 113 73 2 361 470 11 122 8.05e-12 62.8

Find 139 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGAGCCTTCCCTTCTTTC+TGG 0.073281 8_1:-87987512 None:intergenic
ATTGCTAGAAGTTGATTATT+TGG 0.160843 8_1:-87986499 None:intergenic
ACTAATGATGACACGAATTT+TGG 0.175630 8_1:-87986473 None:intergenic
TTATTAATACTATTATTAAA+AGG 0.187697 8_1:-87990818 None:intergenic
AATTATTTGCACCTCATAAA+AGG 0.219139 8_1:-87990681 None:intergenic
TGGTACCAGACAAAGATTTA+AGG 0.227219 8_1:-87986453 None:intergenic
AATAAGCAACAACGTTTCTT+TGG 0.232693 8_1:-87986555 None:intergenic
CACCAGTTTCGGAGGCTAAT+TGG 0.236218 8_1:+87987235 Msa1223470:CDS
TTCTGCATGAAAACATAATA+AGG 0.241332 8_1:-87986862 None:intergenic
GCATGGCTCTTAACATTATT+AGG 0.247506 8_1:-87987465 None:intergenic
GTTAACTGTATTTATCTTGA+TGG 0.253335 8_1:-87990608 None:intergenic
ATCAATATTTATTACCTTCC+AGG 0.272719 8_1:-87990390 None:intergenic
ACCAGTTTCGGAGGCTAATT+GGG 0.293156 8_1:+87987236 Msa1223470:CDS
GTTGTTCTTGTTACTGAAAC+TGG 0.305945 8_1:+87987042 Msa1223470:CDS
GTTATTATCTTCAAAAGTTC+AGG 0.323152 8_1:+87991020 Msa1223470:three_prime_UTR
GTTTATTTGCTTCATGTGTC+TGG 0.323555 8_1:+87987285 Msa1223470:CDS
TTGCTAGAAGTTGATTATTT+GGG 0.326855 8_1:-87986498 None:intergenic
TTGCTTCATGTGTCTGGAAT+TGG 0.332763 8_1:+87987291 Msa1223470:CDS
ATTTCTTTACTAGGAGTAAC+AGG 0.333468 8_1:-87986922 None:intergenic
GTATAATGAAGCAAAGTATT+AGG 0.335193 8_1:-87986952 None:intergenic
GAACAAAGGTGTTGTTCCTT+TGG 0.335719 8_1:+87986882 Msa1223470:CDS
CTCGTCACCGACGGAGATTC+CGG 0.346085 8_1:-87986596 None:intergenic
AAAACACTAGAAGTAGTTTC+AGG 0.346605 8_1:-87987177 None:intergenic
GTTGGATTGGGCGTGTGGAC+CGG 0.349653 8_1:+87987395 Msa1223470:CDS
TTGGATTGGGCGTGTGGACC+GGG 0.354336 8_1:+87987396 Msa1223470:CDS
TTTGAGGTCTCCACCAGTTT+CGG 0.366293 8_1:+87987224 Msa1223470:CDS
AGTAACATTAAGATTCTTCA+TGG 0.366407 8_1:-87987013 None:intergenic
ATTGCAGGCTGCGTTGGATT+GGG 0.368596 8_1:+87987383 Msa1223470:CDS
CAAACACAACAGCAGCTTCA+TGG 0.368886 8_1:+87986530 Msa1223470:CDS
GGATCCACCATTTCTTTACT+AGG 0.370594 8_1:-87986931 None:intergenic
AATAATCAACTTCTAGCAAT+TGG 0.370630 8_1:+87986502 Msa1223470:CDS
TTCCTCTCCATTTCCACTCC+AGG 0.384069 8_1:+87986166 Msa1223470:CDS
CATTGCAGGCTGCGTTGGAT+TGG 0.386054 8_1:+87987382 Msa1223470:CDS
CCCCAATTAGCCTCCGAAAC+TGG 0.387785 8_1:-87987237 None:intergenic
GACAAAGATTTAAGGATGTC+TGG 0.389969 8_1:-87986445 None:intergenic
CACGGGAGCTGTGAATTTCC+TGG 0.394429 8_1:+87990372 Msa1223470:CDS
TCTTTAGAATCACCCTTACT+AGG 0.396789 8_1:-87987069 None:intergenic
TGAAACTGGTTGGCCTAGTA+AGG 0.399770 8_1:+87987056 Msa1223470:CDS
GATTATACCTGGAGTGGAAA+TGG 0.405316 8_1:-87986173 None:intergenic
CTTCCCACTGGTCTGTCTAT+AGG 0.406032 8_1:-87985847 None:intergenic
TATTAATACTATTATTAAAA+GGG 0.410596 8_1:-87990817 None:intergenic
CAGAAAGAAGGGAAGGCTCC+TGG 0.417886 8_1:+87987513 Msa1223470:CDS
TTTGAAAGAAACTGAAGAAT+AGG 0.421559 8_1:-87986808 None:intergenic
GATAGCTATTACCAGAAAGA+AGG 0.426213 8_1:+87987501 Msa1223470:CDS
TAAAGAGCCTTATGCTACTA+AGG 0.434455 8_1:+87987086 Msa1223470:CDS
ATGTCTCCCCGCATTGTTGT+TGG 0.434537 8_1:+87990657 Msa1223470:CDS
TCTACTCACACAAGCAGTGC+TGG 0.436422 8_1:+87990565 Msa1223470:CDS
GAAGAACAGACACAAGGGTT+TGG 0.445231 8_1:-87986783 None:intergenic
GACATCCTTAAATCTTTGTC+TGG 0.452797 8_1:+87986448 Msa1223470:CDS
TATTATGACATAGTGTCCTC+TGG 0.453780 8_1:+87990979 Msa1223470:three_prime_UTR
GAGAAAGGGTTGAGAAGATC+TGG 0.454214 8_1:-87985910 None:intergenic
GAAGACATTGCAGGCTGCGT+TGG 0.457589 8_1:+87987377 Msa1223470:CDS
TTGGGCGTGTGGACCGGGGA+GGG 0.460760 8_1:+87987401 Msa1223470:CDS
AAAGCTTGAGAAGGTGGAAA+AGG 0.468839 8_1:-87986754 None:intergenic
GGAGAAGATCTACTAGAGAA+AGG 0.472646 8_1:-87985925 None:intergenic
GGCTTGTAGCAACTCTCTCC+AGG 0.474324 8_1:-87987444 None:intergenic
TCCTCTTCTTCTACCTGCTA+TGG 0.475155 8_1:+87986645 Msa1223470:CDS
GAAAATGAAGAACAAGAAAG+AGG 0.477626 8_1:+87986307 Msa1223470:CDS
ATTGGGCGTGTGGACCGGGG+AGG 0.479462 8_1:+87987400 Msa1223470:CDS
TGTTACTCCTAGTAAAGAAA+TGG 0.482625 8_1:+87986924 Msa1223470:CDS
GCATTATCCTTAGTAGCATA+AGG 0.490331 8_1:-87987093 None:intergenic
TTATTACATTATGATTATGA+AGG 0.490698 8_1:-87990943 None:intergenic
GCAGTGCTGGGGAGAAGTTA+AGG 0.490725 8_1:+87990578 Msa1223470:CDS
TTCCGGTGATTAATGTTTGA+GGG 0.494760 8_1:-87986579 None:intergenic
ATTCCGGTGATTAATGTTTG+AGG 0.505322 8_1:-87986580 None:intergenic
CTGAACAACCACACACTCAA+TGG 0.506208 8_1:+87986096 Msa1223470:exon
CTACTCACACAAGCAGTGCT+GGG 0.507943 8_1:+87990566 Msa1223470:CDS
AGATCTGGCAAGTGAGGAGT+GGG 0.509783 8_1:-87985895 None:intergenic
GAGGAAGGAAAATGAGAGGA+TGG 0.511501 8_1:-87986149 None:intergenic
AGAGAAAAGGAATGATGGTC+TGG 0.517391 8_1:+87990755 Msa1223470:three_prime_UTR
TTCTTGTTACTGAAACTGGT+TGG 0.520012 8_1:+87987046 Msa1223470:CDS
GAGAAGATCTACTAGAGAAA+GGG 0.520147 8_1:-87985924 None:intergenic
CCATTCATCGGTGTTAACAT+TGG 0.525360 8_1:+87986331 Msa1223470:CDS
GACTCACAAGAAAGCAGTAA+AGG 0.526710 8_1:+87985823 Msa1223470:five_prime_UTR
AAAAGGACCAACAACAATGC+GGG 0.532278 8_1:-87990664 None:intergenic
AGAAGAAGAGGAGCAGAAGA+AGG 0.533656 8_1:-87986634 None:intergenic
GAAGTAGTTTCAGGATTCAA+AGG 0.538932 8_1:-87987168 None:intergenic
TACCCTCAAACATTAATCAC+CGG 0.539504 8_1:+87986577 Msa1223470:CDS
TTGCAAGAGAAAAGGAATGA+TGG 0.542596 8_1:+87990750 Msa1223470:three_prime_UTR
AGAAAGAAGGGAAGGCTCCT+GGG 0.543759 8_1:+87987514 Msa1223470:CDS
GCTGCGTTGGATTGGGCGTG+TGG 0.545065 8_1:+87987390 Msa1223470:CDS
TCCATAGCAGGTAGAAGAAG+AGG 0.546292 8_1:-87986646 None:intergenic
ATTAATACTATTATTAAAAG+GGG 0.547124 8_1:-87990816 None:intergenic
TTGTAAAGAGACTCCATAGC+AGG 0.547474 8_1:-87986658 None:intergenic
GGAATACCTTTGCAGGTCAC+GGG 0.548366 8_1:+87990355 Msa1223470:intron
TTGAGAAGATCTGGCAAGTG+AGG 0.548439 8_1:-87985901 None:intergenic
ACGTACTGCATTGCGATGGA+TGG 0.552902 8_1:+87987345 Msa1223470:CDS
ATGAGAGGATGGAAAAGAGA+AGG 0.553329 8_1:-87986138 None:intergenic
TTAATGATGTTTGGTTTGAG+TGG 0.554958 8_1:-87985965 None:intergenic
AATTGTTCAGAGATTCAACC+TGG 0.556815 8_1:+87987426 Msa1223470:CDS
GGATAAAGATTCATCATCAA+AGG 0.557537 8_1:-87986841 None:intergenic
ATAGCTATTACCAGAAAGAA+GGG 0.560758 8_1:+87987502 Msa1223470:CDS
TGGAGAGGAAGGAAAATGAG+AGG 0.560979 8_1:-87986153 None:intergenic
CCTTTGAAATCACAGCTCCC+AGG 0.562281 8_1:-87987531 None:intergenic
CCAGTTTCGGAGGCTAATTG+GGG 0.563743 8_1:+87987237 Msa1223470:CDS
AAAAGGAATGATGGTCTGGT+AGG 0.568846 8_1:+87990759 Msa1223470:three_prime_UTR
TTGATTGATTATACCTGGAG+TGG 0.569597 8_1:-87986179 None:intergenic
CCAATGTTAACACCGATGAA+TGG 0.571413 8_1:-87986331 None:intergenic
CGGAATCTCCGTCGGTGACG+AGG 0.571434 8_1:+87986597 Msa1223470:CDS
TGGAGTGGAAATGGAGAGGA+AGG 0.571840 8_1:-87986164 None:intergenic
TGGCAAGTGAGGAGTGGGAA+GGG 0.572234 8_1:-87985890 None:intergenic
CCTGGGAGCTGTGATTTCAA+AGG 0.573205 8_1:+87987531 Msa1223470:CDS
TATCAAAAGCATAAGAAGCA+TGG 0.573291 8_1:-87987482 None:intergenic
TACTCCTAGTAAAGAAATGG+TGG 0.581925 8_1:+87986927 Msa1223470:CDS
AGAATTTGCCATTGAGTGTG+TGG 0.582767 8_1:-87986104 None:intergenic
AGGAGCAGAAGAAGGAACAG+TGG 0.586211 8_1:-87986626 None:intergenic
ATTATGACATAGTGTCCTCT+GGG 0.588475 8_1:+87990980 Msa1223470:three_prime_UTR
TGGATTGGGCGTGTGGACCG+GGG 0.589282 8_1:+87987397 Msa1223470:CDS
AAGCAACAAGACAAAGGAAG+TGG 0.589638 8_1:+87990537 Msa1223470:CDS
GAAACTGGTTGGCCTAGTAA+GGG 0.590428 8_1:+87987057 Msa1223470:CDS
TATTGATGAGAAATAATGCA+AGG 0.592876 8_1:+87986039 Msa1223470:five_prime_UTR
AAGATCTGGCAAGTGAGGAG+TGG 0.594241 8_1:-87985896 None:intergenic
TCTGAACAATTAGCCCTCCC+CGG 0.594471 8_1:-87987414 None:intergenic
TGTACTCACTCACTTCCCAC+TGG 0.595271 8_1:-87985859 None:intergenic
TGGAACAGATGTTGAAAACA+TGG 0.596760 8_1:+87986351 Msa1223470:CDS
TGTAGTTGAAGCAGAAGCAG+AGG 0.597009 8_1:+87986065 Msa1223470:five_prime_UTR
GAGGTCTCCACCAGTTTCGG+AGG 0.600438 8_1:+87987227 Msa1223470:CDS
CAATTAGCCTCCGAAACTGG+TGG 0.601892 8_1:-87987234 None:intergenic
GTGGCTCAACAGAAGAGAAG+AGG 0.610020 8_1:-87985946 None:intergenic
CAAGAAAGAGGACCATTCAT+CGG 0.616211 8_1:+87986319 Msa1223470:CDS
CTGGCAAGTGAGGAGTGGGA+AGG 0.616443 8_1:-87985891 None:intergenic
CTATTACCAGAAAGAAGGGA+AGG 0.620079 8_1:+87987506 Msa1223470:CDS
TACTCACACAAGCAGTGCTG+GGG 0.632654 8_1:+87990567 Msa1223470:CDS
GAATGTAAGCAACAAGACAA+AGG 0.641001 8_1:+87990531 Msa1223470:CDS
TCAGACGTACTGCATTGCGA+TGG 0.641902 8_1:+87987341 Msa1223470:CDS
TACCTGGAGTGGAAATGGAG+AGG 0.644213 8_1:-87986168 None:intergenic
GGTGAGAACCTCGTCACCGA+CGG 0.644463 8_1:-87986605 None:intergenic
AGAATAACAGAAGCAGCATG+AGG 0.644610 8_1:-87986727 None:intergenic
TAAGCACTTACTGGGATCTG+TGG 0.657745 8_1:-87987571 None:intergenic
TAGGAAGAAGAACAGACACA+AGG 0.659038 8_1:-87986789 None:intergenic
GGTCCTATAGACAGACCAGT+GGG 0.662187 8_1:+87985844 Msa1223470:five_prime_UTR
GGAGCTGTGAATTTCCTGGA+AGG 0.663981 8_1:+87990376 Msa1223470:CDS
CAGTTTCGGAGGCTAATTGG+GGG 0.670003 8_1:+87987238 Msa1223470:CDS
AGGAAGAAGAACAGACACAA+GGG 0.673536 8_1:-87986788 None:intergenic
AAAGGACCAACAACAATGCG+GGG 0.677073 8_1:-87990663 None:intergenic
TAAAAGGACCAACAACAATG+CGG 0.682023 8_1:-87990665 None:intergenic
CACAAAATTGCATTTCCCAG+AGG 0.692658 8_1:-87990995 None:intergenic
TTAATCACCGGAATCTCCGT+CGG 0.695649 8_1:+87986589 Msa1223470:CDS
AGGTCCTATAGACAGACCAG+TGG 0.732946 8_1:+87985843 Msa1223470:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTAATTAATTAAATTTA+TGG + chr8_1:87988639-87988658 Msa1223470:intron 0.0%
!! AAAAAATATTTAATGATGTT+TGG - chr8_1:87985977-87985996 None:intergenic 10.0%
!! ATAGATTTAATATATATCAA+TGG - chr8_1:87988090-87988109 None:intergenic 10.0%
!! TGATATATATTAAATCTATT+TGG + chr8_1:87988091-87988110 Msa1223470:intron 10.0%
!!! TGATTTTTCATTTAAAATAA+GGG + chr8_1:87988251-87988270 Msa1223470:intron 10.0%
!! TGAAATAAAATTATTTCAAT+CGG - chr8_1:87988600-87988619 None:intergenic 10.0%
!! ATTAATACTATTATTAAAAG+GGG - chr8_1:87990819-87990838 None:intergenic 10.0%
!! ATATATTAAATCTATTTGGA+CGG + chr8_1:87988095-87988114 Msa1223470:intron 15.0%
!!! GTGATTTTTCATTTAAAATA+AGG + chr8_1:87988250-87988269 Msa1223470:intron 15.0%
!!! GATTTTTCATTTAAAATAAG+GGG + chr8_1:87988252-87988271 Msa1223470:intron 15.0%
!!! AACCATTTCATTATTTTAAA+GGG - chr8_1:87988549-87988568 None:intergenic 15.0%
!!! TAACCATTTCATTATTTTAA+AGG - chr8_1:87988550-87988569 None:intergenic 15.0%
!!! TATCCTTTTTTTTTTTTTGA+AGG + chr8_1:87989048-87989067 Msa1223470:intron 15.0%
!! TTTCCTTCAAAAAAAAAAAA+AGG - chr8_1:87989054-87989073 None:intergenic 15.0%
!!! TGATGATTAAGTTTTAATTT+AGG + chr8_1:87989306-87989325 Msa1223470:intron 15.0%
!!! GATGATTAAGTTTTAATTTA+GGG + chr8_1:87989307-87989326 Msa1223470:intron 15.0%
!!! AAAACAGAACATATTTTAAT+TGG - chr8_1:87989561-87989580 None:intergenic 15.0%
!! AATAAAAACATACAAAATTG+TGG - chr8_1:87990258-87990277 None:intergenic 15.0%
!!! ATATAATATTTTTGTTTTCG+TGG + chr8_1:87990332-87990351 Msa1223470:intron 15.0%
!!! TATAATATTTTTGTTTTCGT+GGG + chr8_1:87990333-87990352 Msa1223470:intron 15.0%
!!! AATTTAAATTTTTGCCATTA+TGG + chr8_1:87990700-87990719 Msa1223470:intron 15.0%
!! TTATTACATTATGATTATGA+AGG - chr8_1:87990946-87990965 None:intergenic 15.0%
!!! AATCATCTTTTTTTTTTTGC+AGG + chr8_1:87986256-87986275 Msa1223470:intron 20.0%
!!! TTGATACATTTTGGTAAATT+TGG + chr8_1:87987673-87987692 Msa1223470:intron 20.0%
!!! TGATACATTTTGGTAAATTT+GGG + chr8_1:87987674-87987693 Msa1223470:intron 20.0%
!!! CATGTAAATAAAAGTCTTTT+GGG - chr8_1:87987756-87987775 None:intergenic 20.0%
!!! TCATGTAAATAAAAGTCTTT+TGG - chr8_1:87987757-87987776 None:intergenic 20.0%
!! AAAAGAGTTAATTCTTCTTT+AGG - chr8_1:87987908-87987927 None:intergenic 20.0%
!! ATTTAATATATATCAATGGC+TGG - chr8_1:87988086-87988105 None:intergenic 20.0%
!! ATAGCTATAAAATAATGCTT+TGG - chr8_1:87988190-87988209 None:intergenic 20.0%
!!! TATTTTATAGCTATTTTTGC+TGG + chr8_1:87988196-87988215 Msa1223470:intron 20.0%
!!! ATTTTATAGCTATTTTTGCT+GGG + chr8_1:87988197-87988216 Msa1223470:intron 20.0%
!! AAATCACATAATTAATTCCT+TGG - chr8_1:87988237-87988256 None:intergenic 20.0%
!!! ACCATTTCATTATTTTAAAG+GGG - chr8_1:87988548-87988567 None:intergenic 20.0%
!! AATAAAATTATTTCAATCGG+TGG - chr8_1:87988597-87988616 None:intergenic 20.0%
!! TTATGGTTGATTGAAAAAAT+GGG - chr8_1:87988756-87988775 None:intergenic 20.0%
!! ATTATGGTTGATTGAAAAAA+TGG - chr8_1:87988757-87988776 None:intergenic 20.0%
!! AATTTCGATTATCAATACTT+TGG + chr8_1:87988841-87988860 Msa1223470:intron 20.0%
!! TATTGAAATTCAGTTCAATA+TGG - chr8_1:87989087-87989106 None:intergenic 20.0%
!!! CTTTTTGTTTGTTTAAACAT+GGG + chr8_1:87989485-87989504 Msa1223470:intron 20.0%
!!! TTTTTGTTTGTTTAAACATG+GGG + chr8_1:87989486-87989505 Msa1223470:intron 20.0%
!! TTTAATTGGTATTAATGAAC+AGG - chr8_1:87989547-87989566 None:intergenic 20.0%
!!! CTGTTTTTTTTTTAAACATC+AGG + chr8_1:87989574-87989593 Msa1223470:intron 20.0%
!! AAGCAAGAAAATTATAGATT+TGG - chr8_1:87990156-87990175 None:intergenic 20.0%
!!! AACAATCTATAAAGTATTTG+GGG - chr8_1:87990215-87990234 None:intergenic 20.0%
!!! CAACAATCTATAAAGTATTT+GGG - chr8_1:87990216-87990235 None:intergenic 20.0%
!!! ATAATATTTTTGTTTTCGTG+GGG + chr8_1:87990334-87990353 Msa1223470:intron 20.0%
!! TTAAGCATAATAAAACAAGA+GGG - chr8_1:87990427-87990446 None:intergenic 20.0%
!! TTTAAGCATAATAAAACAAG+AGG - chr8_1:87990428-87990447 None:intergenic 20.0%
! TATTGATGAGAAATAATGCA+AGG + chr8_1:87986039-87986058 Msa1223470:five_prime_UTR 25.0%
! ATTGTTTGATTGATTATACC+TGG - chr8_1:87986187-87986206 None:intergenic 25.0%
!!! CTTCATTTTCTTGTTTTACT+TGG - chr8_1:87986297-87986316 None:intergenic 25.0%
!! TTGCTAGAAGTTGATTATTT+GGG - chr8_1:87986501-87986520 None:intergenic 25.0%
!! ATTGCTAGAAGTTGATTATT+TGG - chr8_1:87986502-87986521 None:intergenic 25.0%
! AATAATCAACTTCTAGCAAT+TGG + chr8_1:87986502-87986521 Msa1223470:CDS 25.0%
! TTTGAAAGAAACTGAAGAAT+AGG - chr8_1:87986811-87986830 None:intergenic 25.0%
! TTCTGCATGAAAACATAATA+AGG - chr8_1:87986865-87986884 None:intergenic 25.0%
!! GTATAATGAAGCAAAGTATT+AGG - chr8_1:87986955-87986974 None:intergenic 25.0%
! AGTAACATTAAGATTCTTCA+TGG - chr8_1:87987016-87987035 None:intergenic 25.0%
!! AGCTTTTTAATGAAGATTTG+AGG + chr8_1:87987208-87987227 Msa1223470:CDS 25.0%
! AATTATTGTAAGCACTTACT+GGG - chr8_1:87987582-87987601 None:intergenic 25.0%
! AAATTATTGTAAGCACTTAC+TGG - chr8_1:87987583-87987602 None:intergenic 25.0%
!! CACATTTTGTCAATATGAAA+TGG - chr8_1:87987613-87987632 None:intergenic 25.0%
! CATTTCATATTGACAAAATG+TGG + chr8_1:87987611-87987630 Msa1223470:intron 25.0%
!! TGTTGCTAATTGATACATTT+TGG + chr8_1:87987664-87987683 Msa1223470:intron 25.0%
!!! TAAATAAAAGTCTTTTGGGT+TGG - chr8_1:87987752-87987771 None:intergenic 25.0%
!!! AGACTTTTATTTACATGATG+TGG + chr8_1:87987759-87987778 Msa1223470:intron 25.0%
!!! GACTTTTATTTACATGATGT+GGG + chr8_1:87987760-87987779 Msa1223470:intron 25.0%
!!! ACTCTTTTGAGAGTAATAAA+AGG + chr8_1:87987920-87987939 Msa1223470:intron 25.0%
! ACTTTACTGATGATTTGAAA+AGG + chr8_1:87987962-87987981 Msa1223470:intron 25.0%
! CTTTACTGATGATTTGAAAA+GGG + chr8_1:87987963-87987982 Msa1223470:intron 25.0%
! TTAAAAGTAGAACTATGACT+AGG + chr8_1:87987994-87988013 Msa1223470:intron 25.0%
! TAAAAGTAGAACTATGACTA+GGG + chr8_1:87987995-87988014 Msa1223470:intron 25.0%
! TATAAAATAATGCTTTGGTG+GGG - chr8_1:87988185-87988204 None:intergenic 25.0%
! CTATAAAATAATGCTTTGGT+GGG - chr8_1:87988186-87988205 None:intergenic 25.0%
!!! TCCCCTTTAAAATAATGAAA+TGG + chr8_1:87988544-87988563 Msa1223470:intron 25.0%
!! AAGTTGTTCATTTGAGATTA+TGG - chr8_1:87988773-87988792 None:intergenic 25.0%
! AACAAGGTGTAATCAATATT+AGG + chr8_1:87988817-87988836 Msa1223470:intron 25.0%
! AATTTAATTATTTCACGCCT+GGG - chr8_1:87989024-87989043 None:intergenic 25.0%
! AAATTTAATTATTTCACGCC+TGG - chr8_1:87989025-87989044 None:intergenic 25.0%
! TATGAAGACACTTTAAACTA+GGG + chr8_1:87989258-87989277 Msa1223470:intron 25.0%
!!! GATTAAGTTTTAATTTAGGG+AGG + chr8_1:87989310-87989329 Msa1223470:intron 25.0%
! AAGAGAAGAATGAAATATCA+TGG + chr8_1:87989362-87989381 Msa1223470:intron 25.0%
! AGAGAAGAATGAAATATCAT+GGG + chr8_1:87989363-87989382 Msa1223470:intron 25.0%
!!! GCTTTTTGTTTGTTTAAACA+TGG + chr8_1:87989484-87989503 Msa1223470:intron 25.0%
!! ATGCACAAATTTAACTTTGA+TGG - chr8_1:87989618-87989637 None:intergenic 25.0%
! ATCAAAGTTAAATTTGTGCA+TGG + chr8_1:87989617-87989636 Msa1223470:intron 25.0%
!! GTGAAATTTGAAATGAAAAG+AGG + chr8_1:87989787-87989806 Msa1223470:intron 25.0%
!!! AAAATTTCTAAGACATGTGA+AGG - chr8_1:87989930-87989949 None:intergenic 25.0%
!!! GTCTTAGAAATTTTTGAAAC+TGG + chr8_1:87989936-87989955 Msa1223470:intron 25.0%
! ACTATTCAATCAAGATTGAA+CGG - chr8_1:87990105-87990124 None:intergenic 25.0%
!! GCAACAATCTATAAAGTATT+TGG - chr8_1:87990217-87990236 None:intergenic 25.0%
! TACTTTATAGATTGTTGCAT+AGG + chr8_1:87990219-87990238 Msa1223470:intron 25.0%
! ATCAATATTTATTACCTTCC+AGG - chr8_1:87990393-87990412 None:intergenic 25.0%
! GTTAACTGTATTTATCTTGA+TGG - chr8_1:87990611-87990630 None:intergenic 25.0%
! AATTATTTGCACCTCATAAA+AGG - chr8_1:87990684-87990703 None:intergenic 25.0%
! TCTAACACAAAATTCCATAA+TGG - chr8_1:87990717-87990736 None:intergenic 25.0%
!!! TTTTAAGATTGCAAGAGAAA+AGG + chr8_1:87990742-87990761 Msa1223470:three_prime_UTR 25.0%
!! TAGTGTGAATAAATTTTCAC+AGG + chr8_1:87990843-87990862 Msa1223470:three_prime_UTR 25.0%
!! AGTGTGAATAAATTTTCACA+GGG + chr8_1:87990844-87990863 Msa1223470:three_prime_UTR 25.0%
!! TTAATGATGTTTGGTTTGAG+TGG - chr8_1:87985968-87985987 None:intergenic 30.0%
GAAAATGAAGAACAAGAAAG+AGG + chr8_1:87986307-87986326 Msa1223470:CDS 30.0%
! ACTAATGATGACACGAATTT+TGG - chr8_1:87986476-87986495 None:intergenic 30.0%
AATAAGCAACAACGTTTCTT+TGG - chr8_1:87986558-87986577 None:intergenic 30.0%
GGATAAAGATTCATCATCAA+AGG - chr8_1:87986844-87986863 None:intergenic 30.0%
! TATGTTTTCATGCAGAACAA+AGG + chr8_1:87986868-87986887 Msa1223470:CDS 30.0%
! CTAAAAAGTGCATTATCCAA+AGG - chr8_1:87986901-87986920 None:intergenic 30.0%
ATTTCTTTACTAGGAGTAAC+AGG - chr8_1:87986925-87986944 None:intergenic 30.0%
TGTTACTCCTAGTAAAGAAA+TGG + chr8_1:87986924-87986943 Msa1223470:CDS 30.0%
!! AAGCATGTTTTTGATCATAG+TGG + chr8_1:87987141-87987160 Msa1223470:CDS 30.0%
AAAACACTAGAAGTAGTTTC+AGG - chr8_1:87987180-87987199 None:intergenic 30.0%
!!! GCTTTTTTATGGGAATATGT+CGG + chr8_1:87987260-87987279 Msa1223470:CDS 30.0%
! TATCAAAAGCATAAGAAGCA+TGG - chr8_1:87987485-87987504 None:intergenic 30.0%
ATAGCTATTACCAGAAAGAA+GGG + chr8_1:87987502-87987521 Msa1223470:CDS 30.0%
TGTCAATATGAAATGGCATA+AGG - chr8_1:87987606-87987625 None:intergenic 30.0%
! TTTGGGATTTCAATTCAATG+TGG + chr8_1:87987691-87987710 Msa1223470:intron 30.0%
AATCAAGTCCAATTTGTGTT+AGG - chr8_1:87987789-87987808 None:intergenic 30.0%
TGCCTAATTAACGTACTTTA+TGG + chr8_1:87987881-87987900 Msa1223470:intron 30.0%
GACCATAAAGTACGTTAATT+AGG - chr8_1:87987886-87987905 None:intergenic 30.0%
AAAAGTAGAACTATGACTAG+GGG + chr8_1:87987996-87988015 Msa1223470:intron 30.0%
GCTATAAAATAATGCTTTGG+TGG - chr8_1:87988187-87988206 None:intergenic 30.0%
TTGCATATTATCTGCATTCA+GGG - chr8_1:87988325-87988344 None:intergenic 30.0%
TTTGCATATTATCTGCATTC+AGG - chr8_1:87988326-87988345 None:intergenic 30.0%
ACTAACAAAGTCTACATTCA+GGG + chr8_1:87988446-87988465 Msa1223470:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG + chr8_1:87988474-87988493 Msa1223470:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG + chr8_1:87988475-87988494 Msa1223470:intron 30.0%
GGAATGAGAAAGATGAAATT+GGG - chr8_1:87988689-87988708 None:intergenic 30.0%
TTGAAGGAGAAATGGAAATT+CGG - chr8_1:87988717-87988736 None:intergenic 30.0%
CTTCACAAATTCAAATGACA+AGG + chr8_1:87989161-87989180 Msa1223470:intron 30.0%
! TCTTCTTTTAGATGAGAGAT+AGG - chr8_1:87989195-87989214 None:intergenic 30.0%
TCTGGACTGATAAAAATTGT+TGG - chr8_1:87989224-87989243 None:intergenic 30.0%
! AATTTTTATCAGTCCAGATC+TGG + chr8_1:87989226-87989245 Msa1223470:intron 30.0%
CTATGAAGACACTTTAAACT+AGG + chr8_1:87989257-87989276 Msa1223470:intron 30.0%
TAATTTAGGGAGGAGAAATA+TGG + chr8_1:87989320-87989339 Msa1223470:intron 30.0%
AATTTAGGGAGGAGAAATAT+GGG + chr8_1:87989321-87989340 Msa1223470:intron 30.0%
TATCATGGGAATGAGAAATA+TGG + chr8_1:87989377-87989396 Msa1223470:intron 30.0%
ATCATGGGAATGAGAAATAT+GGG + chr8_1:87989378-87989397 Msa1223470:intron 30.0%
AAGGGATGAAGGAAATAATA+AGG + chr8_1:87989414-87989433 Msa1223470:intron 30.0%
AATAATAAGGTTGAAGAGAC+TGG + chr8_1:87989427-87989446 Msa1223470:intron 30.0%
! AGAACATAAGTGATTTTCGA+TGG + chr8_1:87989462-87989481 Msa1223470:intron 30.0%
AAATGAAATGCATTTGTGTG+TGG + chr8_1:87989713-87989732 Msa1223470:intron 30.0%
ACTGTCAAGAAAAACAAACA+GGG - chr8_1:87989876-87989895 None:intergenic 30.0%
TACTGTCAAGAAAAACAAAC+AGG - chr8_1:87989877-87989896 None:intergenic 30.0%
ATTGTTGCATAGGTGTAAAA+TGG + chr8_1:87990229-87990248 Msa1223470:intron 30.0%
TTGTTGCATAGGTGTAAAAT+GGG + chr8_1:87990230-87990249 Msa1223470:intron 30.0%
AATAAAACAAGAGGGTAAGT+TGG - chr8_1:87990419-87990438 None:intergenic 30.0%
GAGAAGATCTACTAGAGAAA+GGG - chr8_1:87985927-87985946 None:intergenic 35.0%
TTGATTGATTATACCTGGAG+TGG - chr8_1:87986182-87986201 None:intergenic 35.0%
TGGAACAGATGTTGAAAACA+TGG + chr8_1:87986351-87986370 Msa1223470:CDS 35.0%
GACAAAGATTTAAGGATGTC+TGG - chr8_1:87986448-87986467 None:intergenic 35.0%
GACATCCTTAAATCTTTGTC+TGG + chr8_1:87986448-87986467 Msa1223470:CDS 35.0%
TGGTACCAGACAAAGATTTA+AGG - chr8_1:87986456-87986475 None:intergenic 35.0%
TACCCTCAAACATTAATCAC+CGG + chr8_1:87986577-87986596 Msa1223470:CDS 35.0%
TTCCGGTGATTAATGTTTGA+GGG - chr8_1:87986582-87986601 None:intergenic 35.0%
ATTCCGGTGATTAATGTTTG+AGG - chr8_1:87986583-87986602 None:intergenic 35.0%
TTGAAAAAAGCTTGAGAAGG+TGG - chr8_1:87986763-87986782 None:intergenic 35.0%
TGGTTGAAAAAAGCTTGAGA+AGG - chr8_1:87986766-87986785 None:intergenic 35.0%
TACTCCTAGTAAAGAAATGG+TGG + chr8_1:87986927-87986946 Msa1223470:CDS 35.0%
GTTGTTCTTGTTACTGAAAC+TGG + chr8_1:87987042-87987061 Msa1223470:CDS 35.0%
TTCTTGTTACTGAAACTGGT+TGG + chr8_1:87987046-87987065 Msa1223470:CDS 35.0%
!! TCTTTAGAATCACCCTTACT+AGG - chr8_1:87987072-87987091 None:intergenic 35.0%
! TAAAGAGCCTTATGCTACTA+AGG + chr8_1:87987086-87987105 Msa1223470:CDS 35.0%
GCATTATCCTTAGTAGCATA+AGG - chr8_1:87987096-87987115 None:intergenic 35.0%
GAAGTAGTTTCAGGATTCAA+AGG - chr8_1:87987171-87987190 None:intergenic 35.0%
!!! CTAATTGGGGGCTTTTTTAT+GGG + chr8_1:87987250-87987269 Msa1223470:CDS 35.0%
! TTTTTATGGGAATATGTCGG+CGG + chr8_1:87987263-87987282 Msa1223470:CDS 35.0%
GTTTATTTGCTTCATGTGTC+TGG + chr8_1:87987285-87987304 Msa1223470:CDS 35.0%
!!! GTCTGGAATTGGAACTTTTT+TGG + chr8_1:87987302-87987321 Msa1223470:CDS 35.0%
!! TTTTGATTCGAAGACATTGC+AGG + chr8_1:87987368-87987387 Msa1223470:CDS 35.0%
AATTGTTCAGAGATTCAACC+TGG + chr8_1:87987426-87987445 Msa1223470:CDS 35.0%
GCATGGCTCTTAACATTATT+AGG - chr8_1:87987468-87987487 None:intergenic 35.0%
GATAGCTATTACCAGAAAGA+AGG + chr8_1:87987501-87987520 Msa1223470:CDS 35.0%
CAATGTGGCATCAAATTGTT+AGG + chr8_1:87987706-87987725 Msa1223470:intron 35.0%
CAAACAAAAAGCAGCAATGT+TGG - chr8_1:87987826-87987845 None:intergenic 35.0%
!!! TTGCTGCTTTTTGTTTGATG+TGG + chr8_1:87987829-87987848 Msa1223470:intron 35.0%
TTTGTTTGATGTGGCTATTC+TGG + chr8_1:87987838-87987857 Msa1223470:intron 35.0%
TTGTTTGATGTGGCTATTCT+GGG + chr8_1:87987839-87987858 Msa1223470:intron 35.0%
GGCAAAACAACATGAATTTG+AGG - chr8_1:87987865-87987884 None:intergenic 35.0%
! AGAGCCTTTTACTTTGTACA+CGG + chr8_1:87988145-87988164 Msa1223470:intron 35.0%
GAATCCGTGTACAAAGTAAA+AGG - chr8_1:87988152-87988171 None:intergenic 35.0%
ACTAACGAAGTCTACATTCA+GGG + chr8_1:87988382-87988401 Msa1223470:intron 35.0%
TCAGGGACTAAATTGACTAA+CGG + chr8_1:87988399-87988418 Msa1223470:intron 35.0%
GACTAACAAAGTCTACATTC+AGG + chr8_1:87988445-87988464 Msa1223470:intron 35.0%
! AAAGATGAAATTGGGTTGCT+GGG - chr8_1:87988681-87988700 None:intergenic 35.0%
CGGAATGAGAAAGATGAAAT+TGG - chr8_1:87988690-87988709 None:intergenic 35.0%
AGAAATGGAAATTCGGAAAG+CGG - chr8_1:87988710-87988729 None:intergenic 35.0%
GGTTGATTGAAAAAATGGGT+GGG - chr8_1:87988752-87988771 None:intergenic 35.0%
TGGTTGATTGAAAAAATGGG+TGG - chr8_1:87988753-87988772 None:intergenic 35.0%
AAATGAACAACTTCTTCACC+AGG + chr8_1:87988780-87988799 Msa1223470:intron 35.0%
! TACACCTTGTTTGTTTGAGA+AGG - chr8_1:87988808-87988827 None:intergenic 35.0%
CATAGTTCATTGTATCATCG+AGG - chr8_1:87988885-87988904 None:intergenic 35.0%
! TCGATGTTTTCTTCTGTGTT+GGG + chr8_1:87988971-87988990 Msa1223470:intron 35.0%
!! CATAGTTTGTTATCCAGATC+TGG - chr8_1:87989242-87989261 None:intergenic 35.0%
AAGACACTTTAAACTAGGGA+TGG + chr8_1:87989262-87989281 Msa1223470:intron 35.0%
ATTTAGGGAGGAGAAATATG+GGG + chr8_1:87989322-87989341 Msa1223470:intron 35.0%
GTTGAAGAGACTGGAAAAAT+TGG + chr8_1:87989436-87989455 Msa1223470:intron 35.0%
ACATCAGGTAATAAACTGAC+AGG + chr8_1:87989589-87989608 Msa1223470:intron 35.0%
CAAAGATTTGTGTAGTGTGT+AGG + chr8_1:87989642-87989661 Msa1223470:intron 35.0%
AACATAGCAATACCTAGTCA+TGG - chr8_1:87989678-87989697 None:intergenic 35.0%
!! CTGCAAAGGAACTTTTGATT+TGG + chr8_1:87989747-87989766 Msa1223470:intron 35.0%
GTGAAGGTAATCTACAAACA+TGG - chr8_1:87989914-87989933 None:intergenic 35.0%
CTGAACAGTTCAATCTTAGT+CGG - chr8_1:87990023-87990042 None:intergenic 35.0%
AACTGTTCAGATTTCAAGCT+CGG + chr8_1:87990033-87990052 Msa1223470:intron 35.0%
TTGATTGAATAGTCGAGATG+TGG + chr8_1:87990112-87990131 Msa1223470:intron 35.0%
! TTCCTTGTTGTGTCTATTTC+AGG + chr8_1:87990281-87990300 Msa1223470:intron 35.0%
TTCCTGAAATAGACACAACA+AGG - chr8_1:87990286-87990305 None:intergenic 35.0%
GAATGTAAGCAACAAGACAA+AGG + chr8_1:87990531-87990550 Msa1223470:CDS 35.0%
TAAAAGGACCAACAACAATG+CGG - chr8_1:87990668-87990687 None:intergenic 35.0%
!! TTGTTGTTGGTCCTTTTATG+AGG + chr8_1:87990670-87990689 Msa1223470:CDS 35.0%
TTGCAAGAGAAAAGGAATGA+TGG + chr8_1:87990750-87990769 Msa1223470:three_prime_UTR 35.0%
TATTATGACATAGTGTCCTC+TGG + chr8_1:87990979-87990998 Msa1223470:three_prime_UTR 35.0%
ATTATGACATAGTGTCCTCT+GGG + chr8_1:87990980-87990999 Msa1223470:three_prime_UTR 35.0%
GACTCACAAGAAAGCAGTAA+AGG + chr8_1:87985823-87985842 Msa1223470:five_prime_UTR 40.0%
GGAGAAGATCTACTAGAGAA+AGG - chr8_1:87985928-87985947 None:intergenic 40.0%
AGAATTTGCCATTGAGTGTG+TGG - chr8_1:87986107-87986126 None:intergenic 40.0%
ATGAGAGGATGGAAAAGAGA+AGG - chr8_1:87986141-87986160 None:intergenic 40.0%
GATTATACCTGGAGTGGAAA+TGG - chr8_1:87986176-87986195 None:intergenic 40.0%
CAAGAAAGAGGACCATTCAT+CGG + chr8_1:87986319-87986338 Msa1223470:CDS 40.0%
CCAATGTTAACACCGATGAA+TGG - chr8_1:87986334-87986353 None:intergenic 40.0%
!! CCATTCATCGGTGTTAACAT+TGG + chr8_1:87986331-87986350 Msa1223470:CDS 40.0%
TTGTAAAGAGACTCCATAGC+AGG - chr8_1:87986661-87986680 None:intergenic 40.0%
AGAATAACAGAAGCAGCATG+AGG - chr8_1:87986730-87986749 None:intergenic 40.0%
AAAGCTTGAGAAGGTGGAAA+AGG - chr8_1:87986757-87986776 None:intergenic 40.0%
AGGAAGAAGAACAGACACAA+GGG - chr8_1:87986791-87986810 None:intergenic 40.0%
TAGGAAGAAGAACAGACACA+AGG - chr8_1:87986792-87986811 None:intergenic 40.0%
!! GAACAAAGGTGTTGTTCCTT+TGG + chr8_1:87986882-87986901 Msa1223470:CDS 40.0%
GGATCCACCATTTCTTTACT+AGG - chr8_1:87986934-87986953 None:intergenic 40.0%
!!! GCTAATTGGGGGCTTTTTTA+TGG + chr8_1:87987249-87987268 Msa1223470:CDS 40.0%
! TTGCTTCATGTGTCTGGAAT+TGG + chr8_1:87987291-87987310 Msa1223470:CDS 40.0%
CTATTACCAGAAAGAAGGGA+AGG + chr8_1:87987506-87987525 Msa1223470:CDS 40.0%
TTAAATCTATTTGGACGGCC+AGG + chr8_1:87988100-87988119 Msa1223470:intron 40.0%
CAAAGTAAAAGGCTCTTTGC+AGG - chr8_1:87988141-87988160 None:intergenic 40.0%
!!! CTATTTTTGCTGGGCTTTGT+GGG + chr8_1:87988206-87988225 Msa1223470:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + chr8_1:87988278-87988297 Msa1223470:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + chr8_1:87988279-87988298 Msa1223470:intron 40.0%
GACTAACGAAGTCTACATTC+AGG + chr8_1:87988381-87988400 Msa1223470:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - chr8_1:87988279-87988298 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - chr8_1:87988278-87988297 None:intergenic 40.0%
! GAAAGATGAAATTGGGTTGC+TGG - chr8_1:87988682-87988701 None:intergenic 40.0%
!! GAAAAGCGTTGAAGGAGAAA+TGG - chr8_1:87988725-87988744 None:intergenic 40.0%
! GTCGATGTTTTCTTCTGTGT+TGG + chr8_1:87988970-87988989 Msa1223470:intron 40.0%
! CGATGTTTTCTTCTGTGTTG+GGG + chr8_1:87988972-87988991 Msa1223470:intron 40.0%
TATCATAGAACAAGCAGCAC+TGG + chr8_1:87989105-87989124 Msa1223470:intron 40.0%
! GGAATGAGAAATATGGGTTG+AGG + chr8_1:87989384-87989403 Msa1223470:intron 40.0%
! GAAATATGGGTTGAGGTGAA+TGG + chr8_1:87989391-87989410 Msa1223470:intron 40.0%
! ATGGGGTGTCTTTCTTAACT+TGG + chr8_1:87989503-87989522 Msa1223470:intron 40.0%
TCAGGTAATAAACTGACAGG+TGG + chr8_1:87989592-87989611 Msa1223470:intron 40.0%
ATAGCAATACCTAGTCATGG+TGG - chr8_1:87989675-87989694 None:intergenic 40.0%
AAAGTTCCTTTGCAGTGTGT+GGG - chr8_1:87989742-87989761 None:intergenic 40.0%
AAAAGTTCCTTTGCAGTGTG+TGG - chr8_1:87989743-87989762 None:intergenic 40.0%
ACAAACCAACATCCAACTCA+TGG - chr8_1:87989844-87989863 None:intergenic 40.0%
CTTGACAGTAGCAAAGATTC+TGG + chr8_1:87989887-87989906 Msa1223470:intron 40.0%
ACAGTTCAATCTTAGTCGGA+CGG - chr8_1:87990019-87990038 None:intergenic 40.0%
AAGCAACAAGACAAAGGAAG+TGG + chr8_1:87990537-87990556 Msa1223470:CDS 40.0%
AAAAGGACCAACAACAATGC+GGG - chr8_1:87990667-87990686 None:intergenic 40.0%
AGAGAAAAGGAATGATGGTC+TGG + chr8_1:87990755-87990774 Msa1223470:three_prime_UTR 40.0%
AAAAGGAATGATGGTCTGGT+AGG + chr8_1:87990759-87990778 Msa1223470:three_prime_UTR 40.0%
CACAAAATTGCATTTCCCAG+AGG - chr8_1:87990998-87991017 None:intergenic 40.0%
TTGAGAAGATCTGGCAAGTG+AGG - chr8_1:87985904-87985923 None:intergenic 45.0%
GAGAAAGGGTTGAGAAGATC+TGG - chr8_1:87985913-87985932 None:intergenic 45.0%
TGTAGTTGAAGCAGAAGCAG+AGG + chr8_1:87986065-87986084 Msa1223470:five_prime_UTR 45.0%
CTGAACAACCACACACTCAA+TGG + chr8_1:87986096-87986115 Msa1223470:exon 45.0%
GAGGAAGGAAAATGAGAGGA+TGG - chr8_1:87986152-87986171 None:intergenic 45.0%
TGGAGAGGAAGGAAAATGAG+AGG - chr8_1:87986156-87986175 None:intergenic 45.0%
CAAACACAACAGCAGCTTCA+TGG + chr8_1:87986530-87986549 Msa1223470:CDS 45.0%
TTAATCACCGGAATCTCCGT+CGG + chr8_1:87986589-87986608 Msa1223470:CDS 45.0%
AGAAGAAGAGGAGCAGAAGA+AGG - chr8_1:87986637-87986656 None:intergenic 45.0%
TCCTCTTCTTCTACCTGCTA+TGG + chr8_1:87986645-87986664 Msa1223470:CDS 45.0%
TCCATAGCAGGTAGAAGAAG+AGG - chr8_1:87986649-87986668 None:intergenic 45.0%
GAAGAACAGACACAAGGGTT+TGG - chr8_1:87986786-87986805 None:intergenic 45.0%
!! TGAAACTGGTTGGCCTAGTA+AGG + chr8_1:87987056-87987075 Msa1223470:CDS 45.0%
!! GAAACTGGTTGGCCTAGTAA+GGG + chr8_1:87987057-87987076 Msa1223470:CDS 45.0%
! TTTGAGGTCTCCACCAGTTT+CGG + chr8_1:87987224-87987243 Msa1223470:CDS 45.0%
ACCAGTTTCGGAGGCTAATT+GGG + chr8_1:87987236-87987255 Msa1223470:CDS 45.0%
TAAGCACTTACTGGGATCTG+TGG - chr8_1:87987574-87987593 None:intergenic 45.0%
GTGGGACTCCTAACACAAAT+TGG + chr8_1:87987778-87987797 Msa1223470:intron 45.0%
AGTAGAACTATGACTAGGGG+TGG + chr8_1:87987999-87988018 Msa1223470:intron 45.0%
GCTTTGGTGGGGTAATGTAT+CGG - chr8_1:87988174-87988193 None:intergenic 45.0%
!!! GCTATTTTTGCTGGGCTTTG+TGG + chr8_1:87988205-87988224 Msa1223470:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG + chr8_1:87988280-87988299 Msa1223470:intron 45.0%
TATGCAAAACAGTCCCTGCA+TGG + chr8_1:87988338-87988357 Msa1223470:intron 45.0%
TCCCTGCATGGTCAATTTCA+GGG + chr8_1:87988350-87988369 Msa1223470:intron 45.0%
TCCCTGAAATTGACCATGCA+GGG - chr8_1:87988354-87988373 None:intergenic 45.0%
ACTAACGGAGTCTGCATTCA+GGG + chr8_1:87988414-87988433 Msa1223470:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG - chr8_1:87988280-87988299 None:intergenic 45.0%
!! TGGGAAGAGAAAAGCGTTGA+AGG - chr8_1:87988733-87988752 None:intergenic 45.0%
TGTTTGTTTGAGAAGGCTCC+TGG - chr8_1:87988801-87988820 None:intergenic 45.0%
GGAGCCTTCTCAAACAAACA+AGG + chr8_1:87988801-87988820 Msa1223470:intron 45.0%
CTGTGTTGGGGAAGAAAAGT+TGG + chr8_1:87988984-87989003 Msa1223470:intron 45.0%
TGGTAGACTCGTATATACCC+AGG + chr8_1:87989004-87989023 Msa1223470:intron 45.0%
ATGGGGTTGAAGTGAAGTGA+AGG + chr8_1:87989339-87989358 Msa1223470:intron 45.0%
! TATGGGTTGAGGTGAATGGA+AGG + chr8_1:87989395-87989414 Msa1223470:intron 45.0%
! ATGGGTTGAGGTGAATGGAA+GGG + chr8_1:87989396-87989415 Msa1223470:intron 45.0%
! GGGTGTCTTTCTTAACTTGG+TGG + chr8_1:87989506-87989525 Msa1223470:intron 45.0%
GGTTAAATGCCACCATGACT+AGG + chr8_1:87989663-87989682 Msa1223470:intron 45.0%
AAGTTCCTTTGCAGTGTGTG+GGG - chr8_1:87989741-87989760 None:intergenic 45.0%
GGAAACTGTAGTAGTAGCAC+TGG + chr8_1:87989808-87989827 Msa1223470:intron 45.0%
ACATCCAACTCATGGAGAGT+GGG - chr8_1:87989836-87989855 None:intergenic 45.0%
AACATCCAACTCATGGAGAG+TGG - chr8_1:87989837-87989856 None:intergenic 45.0%
! ACTCTCCATGAGTTGGATGT+TGG + chr8_1:87989836-87989855 Msa1223470:intron 45.0%
TTGATTGCGTCCAACCAAAC+GGG - chr8_1:87989980-87989999 None:intergenic 45.0%
CTTGATTGCGTCCAACCAAA+CGG - chr8_1:87989981-87990000 None:intergenic 45.0%
AAAGGACCAACAACAATGCG+GGG - chr8_1:87990666-87990685 None:intergenic 45.0%
!! TATTAATACTATTATTAAAA+GGG - chr8_1:87990820-87990839 None:intergenic 5.0%
!! TTATTAATACTATTATTAAA+AGG - chr8_1:87990821-87990840 None:intergenic 5.0%
AGGTCCTATAGACAGACCAG+TGG + chr8_1:87985843-87985862 Msa1223470:five_prime_UTR 50.0%
GGTCCTATAGACAGACCAGT+GGG + chr8_1:87985844-87985863 Msa1223470:five_prime_UTR 50.0%
! CTTCCCACTGGTCTGTCTAT+AGG - chr8_1:87985850-87985869 None:intergenic 50.0%
TGTACTCACTCACTTCCCAC+TGG - chr8_1:87985862-87985881 None:intergenic 50.0%
AGATCTGGCAAGTGAGGAGT+GGG - chr8_1:87985898-87985917 None:intergenic 50.0%
AAGATCTGGCAAGTGAGGAG+TGG - chr8_1:87985899-87985918 None:intergenic 50.0%
GTGGCTCAACAGAAGAGAAG+AGG - chr8_1:87985949-87985968 None:intergenic 50.0%
TGGAGTGGAAATGGAGAGGA+AGG - chr8_1:87986167-87986186 None:intergenic 50.0%
TTCCTCTCCATTTCCACTCC+AGG + chr8_1:87986166-87986185 Msa1223470:CDS 50.0%
TACCTGGAGTGGAAATGGAG+AGG - chr8_1:87986171-87986190 None:intergenic 50.0%
AGGAGCAGAAGAAGGAACAG+TGG - chr8_1:87986629-87986648 None:intergenic 50.0%
! CAATTAGCCTCCGAAACTGG+TGG - chr8_1:87987237-87987256 None:intergenic 50.0%
CACCAGTTTCGGAGGCTAAT+TGG + chr8_1:87987235-87987254 Msa1223470:CDS 50.0%
CCAGTTTCGGAGGCTAATTG+GGG + chr8_1:87987237-87987256 Msa1223470:CDS 50.0%
CAGTTTCGGAGGCTAATTGG+GGG + chr8_1:87987238-87987257 Msa1223470:CDS 50.0%
TCAGACGTACTGCATTGCGA+TGG + chr8_1:87987341-87987360 Msa1223470:CDS 50.0%
ACGTACTGCATTGCGATGGA+TGG + chr8_1:87987345-87987364 Msa1223470:CDS 50.0%
ATTGCAGGCTGCGTTGGATT+GGG + chr8_1:87987383-87987402 Msa1223470:CDS 50.0%
TCTGAACAATTAGCCCTCCC+CGG - chr8_1:87987417-87987436 None:intergenic 50.0%
AGAAAGAAGGGAAGGCTCCT+GGG + chr8_1:87987514-87987533 Msa1223470:CDS 50.0%
!! CCTTTGAAATCACAGCTCCC+AGG - chr8_1:87987534-87987553 None:intergenic 50.0%
CCTGGGAGCTGTGATTTCAA+AGG + chr8_1:87987531-87987550 Msa1223470:CDS 50.0%
!! TTGGGTTGGACTCTTCTCGT+GGG - chr8_1:87987738-87987757 None:intergenic 50.0%
!! TTTGGGTTGGACTCTTCTCG+TGG - chr8_1:87987739-87987758 None:intergenic 50.0%
AGGTTGCCAATCACACATCC+TGG - chr8_1:87988121-87988140 None:intergenic 50.0%
!! TTTTGCTGGGCTTTGTGGGT+TGG + chr8_1:87988210-87988229 Msa1223470:intron 50.0%
! TTTGCTGGGCTTTGTGGGTT+GGG + chr8_1:87988211-87988230 Msa1223470:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG - chr8_1:87988506-87988525 None:intergenic 50.0%
TGACGAATCGTTCCCCATTC+AGG - chr8_1:87988505-87988524 None:intergenic 50.0%
GTCCCTGCATGGTCAATTTC+AGG + chr8_1:87988349-87988368 Msa1223470:intron 50.0%
GTCCCTGAAATTGACCATGC+AGG - chr8_1:87988355-87988374 None:intergenic 50.0%
GACTAACGGAGTCTGCATTC+AGG + chr8_1:87988413-87988432 Msa1223470:intron 50.0%
TGACGAATCGTTCCCCATTC+AGG + chr8_1:87988505-87988524 Msa1223470:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG + chr8_1:87988506-87988525 Msa1223470:intron 50.0%
GAGGTGAATGGAAGGGATGA+AGG + chr8_1:87989403-87989422 Msa1223470:intron 50.0%
TGATTGCGTCCAACCAAACG+GGG - chr8_1:87989979-87989998 None:intergenic 50.0%
TTCGTGGGGAATACCTTTGC+AGG + chr8_1:87990348-87990367 Msa1223470:intron 50.0%
GGGAATACCTTTGCAGGTCA+CGG + chr8_1:87990354-87990373 Msa1223470:intron 50.0%
GGAATACCTTTGCAGGTCAC+GGG + chr8_1:87990355-87990374 Msa1223470:intron 50.0%
GGAGCTGTGAATTTCCTGGA+AGG + chr8_1:87990376-87990395 Msa1223470:CDS 50.0%
TCTACTCACACAAGCAGTGC+TGG + chr8_1:87990565-87990584 Msa1223470:CDS 50.0%
CTACTCACACAAGCAGTGCT+GGG + chr8_1:87990566-87990585 Msa1223470:CDS 50.0%
TACTCACACAAGCAGTGCTG+GGG + chr8_1:87990567-87990586 Msa1223470:CDS 50.0%
ATGTCTCCCCGCATTGTTGT+TGG + chr8_1:87990657-87990676 Msa1223470:CDS 50.0%
TGGCAAGTGAGGAGTGGGAA+GGG - chr8_1:87985893-87985912 None:intergenic 55.0%
! CCCCAATTAGCCTCCGAAAC+TGG - chr8_1:87987240-87987259 None:intergenic 55.0%
GAAGACATTGCAGGCTGCGT+TGG + chr8_1:87987377-87987396 Msa1223470:CDS 55.0%
CATTGCAGGCTGCGTTGGAT+TGG + chr8_1:87987382-87987401 Msa1223470:CDS 55.0%
GGCTTGTAGCAACTCTCTCC+AGG - chr8_1:87987447-87987466 None:intergenic 55.0%
CAGGAGCCTTCCCTTCTTTC+TGG - chr8_1:87987515-87987534 None:intergenic 55.0%
CAGAAAGAAGGGAAGGCTCC+TGG + chr8_1:87987513-87987532 Msa1223470:CDS 55.0%
TGGAACCCCACACACTGCAA+AGG + chr8_1:87989733-87989752 Msa1223470:intron 55.0%
TGTGCTGTCACAACCCCGTT+TGG + chr8_1:87989963-87989982 Msa1223470:intron 55.0%
CTGTCACAACCCCGTTTGGT+TGG + chr8_1:87989967-87989986 Msa1223470:intron 55.0%
TTAGTCGGACGGTCGAGAAG+TGG - chr8_1:87990008-87990027 None:intergenic 55.0%
CACGGGAGCTGTGAATTTCC+TGG + chr8_1:87990372-87990391 Msa1223470:CDS 55.0%
! GCAGTGCTGGGGAGAAGTTA+AGG + chr8_1:87990578-87990597 Msa1223470:CDS 55.0%
CTGGCAAGTGAGGAGTGGGA+AGG - chr8_1:87985894-87985913 None:intergenic 60.0%
CTCGTCACCGACGGAGATTC+CGG - chr8_1:87986599-87986618 None:intergenic 60.0%
GGTGAGAACCTCGTCACCGA+CGG - chr8_1:87986608-87986627 None:intergenic 60.0%
GAGGTCTCCACCAGTTTCGG+AGG + chr8_1:87987227-87987246 Msa1223470:CDS 60.0%
! GTTGGATTGGGCGTGTGGAC+CGG + chr8_1:87987395-87987414 Msa1223470:CDS 60.0%
! TTGGATTGGGCGTGTGGACC+GGG + chr8_1:87987396-87987415 Msa1223470:CDS 60.0%
GGACGGCCAGGATGTGTGAT+TGG + chr8_1:87988112-87988131 Msa1223470:intron 60.0%
GGCTCCCACTCTCCATGAGT+TGG + chr8_1:87989829-87989848 Msa1223470:intron 60.0%
ACAGCTCCCGTGACCTGCAA+AGG - chr8_1:87990364-87990383 None:intergenic 60.0%
CGGAATCTCCGTCGGTGACG+AGG + chr8_1:87986597-87986616 Msa1223470:CDS 65.0%
! GCTGCGTTGGATTGGGCGTG+TGG + chr8_1:87987390-87987409 Msa1223470:CDS 65.0%
! TGGATTGGGCGTGTGGACCG+GGG + chr8_1:87987397-87987416 Msa1223470:CDS 65.0%
!! GGGCTTTGTGGGTTGGGCCA+AGG + chr8_1:87988217-87988236 Msa1223470:intron 65.0%
ATTGGGCGTGTGGACCGGGG+AGG + chr8_1:87987400-87987419 Msa1223470:CDS 70.0%
TTGGGCGTGTGGACCGGGGA+GGG + chr8_1:87987401-87987420 Msa1223470:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 87985812 87991040 87985812 ID=Msa1223470;Name=Msa1223470
chr8_1 mRNA 87985812 87991040 87985812 ID=Msa1223470-mRNA-1;Parent=Msa1223470;Name=Msa1223470-mRNA-1;_AED=0.03;_eAED=0.03;_QI=303|1|1|1|0.75|0.6|5|330|522
chr8_1 exon 87985812 87986187 87985812 ID=Msa1223470-mRNA-1:exon:31903;Parent=Msa1223470-mRNA-1
chr8_1 exon 87986278 87987582 87986278 ID=Msa1223470-mRNA-1:exon:31904;Parent=Msa1223470-mRNA-1
chr8_1 exon 87990370 87990397 87990370 ID=Msa1223470-mRNA-1:exon:31905;Parent=Msa1223470-mRNA-1
chr8_1 exon 87990528 87990702 87990528 ID=Msa1223470-mRNA-1:exon:31906;Parent=Msa1223470-mRNA-1
chr8_1 exon 87990723 87991040 87990723 ID=Msa1223470-mRNA-1:exon:31907;Parent=Msa1223470-mRNA-1
chr8_1 five_prime_UTR 87985812 87986114 87985812 ID=Msa1223470-mRNA-1:five_prime_utr;Parent=Msa1223470-mRNA-1
chr8_1 CDS 87986115 87986187 87986115 ID=Msa1223470-mRNA-1:cds;Parent=Msa1223470-mRNA-1
chr8_1 CDS 87986278 87987582 87986278 ID=Msa1223470-mRNA-1:cds;Parent=Msa1223470-mRNA-1
chr8_1 CDS 87990370 87990397 87990370 ID=Msa1223470-mRNA-1:cds;Parent=Msa1223470-mRNA-1
chr8_1 CDS 87990528 87990690 87990528 ID=Msa1223470-mRNA-1:cds;Parent=Msa1223470-mRNA-1
chr8_1 three_prime_UTR 87990691 87990702 87990691 ID=Msa1223470-mRNA-1:three_prime_utr;Parent=Msa1223470-mRNA-1
chr8_1 three_prime_UTR 87990723 87991040 87990723 ID=Msa1223470-mRNA-1:three_prime_utr;Parent=Msa1223470-mRNA-1
Gene Sequence

>Msa1223470

ATGGCAAATTCTAACTATCTCATCCTTCTCTTTTCCATCCTCTCATTTTCCTTCCTCTCCATTTCCACTCCAGGTGAAAGTTCACATTTCCAAGTAAAACAAGAAAATGAAGAACAAGAAAGAGGACCATTCATCGGTGTTAACATTGGAACAGATGTTGAAAACATGGCATCAACTTCAGACATAGTTTCATTTCTGAAGTTACAAAAAATAACACATGTTCGTATCTATGATGCAAATCCAGACATCCTTAAATCTTTGTCTGGTACCAAAATTCGTGTCATCATTAGTGTCCCAAATAATCAACTTCTAGCAATTGGTTCTTCAAACACAACAGCAGCTTCATGGATCCAAAGAAACGTTGTTGCTTATTACCCTCAAACATTAATCACCGGAATCTCCGTCGGTGACGAGGTTCTCACCACTGTTCCTTCTTCTGCTCCTCTTCTTCTACCTGCTATGGAGTCTCTTTACAATGCTCTTGTTTCTTCAAATCTTCATCAACAAATCAAAGTTTCAACTCCTCATGCTGCTTCTGTTATTCTTGATCCTTTTCCACCTTCTCAAGCTTTTTTCAACCAAACCCTTGTGTCTGTTCTTCTTCCTATTCTTCAGTTTCTTTCAAAGACTGAATCTCCTTTGATGATGAATCTTTATCCTTATTATGTTTTCATGCAGAACAAAGGTGTTGTTCCTTTGGATAATGCACTTTTTAGACCTGTTACTCCTAGTAAAGAAATGGTGGATCCTAATACTTTGCTTCATTATACTAATGTTCTTGATGCAATGATTGATTCTGCTTATTTTTCCATGAAGAATCTTAATGTTACTGATGTTGTTGTTCTTGTTACTGAAACTGGTTGGCCTAGTAAGGGTGATTCTAAAGAGCCTTATGCTACTAAGGATAATGCTGATACTTATAATTCTAATTTGATTAAGCATGTTTTTGATCATAGTGGAACACCTTTGAATCCTGAAACTACTTCTAGTGTTTTTATCTATGAGCTTTTTAATGAAGATTTGAGGTCTCCACCAGTTTCGGAGGCTAATTGGGGGCTTTTTTATGGGAATATGTCGGCGGTTTATTTGCTTCATGTGTCTGGAATTGGAACTTTTTTGGCGAATGATACGACGAATCAGACGTACTGCATTGCGATGGATGGTTTTGATTCGAAGACATTGCAGGCTGCGTTGGATTGGGCGTGTGGACCGGGGAGGGCTAATTGTTCAGAGATTCAACCTGGAGAGAGTTGCTACAAGCCTAATAATGTTAAGAGCCATGCTTCTTATGCTTTTGATAGCTATTACCAGAAAGAAGGGAAGGCTCCTGGGAGCTGTGATTTCAAAGGAGTTGCTATGATCACAACCACAGATCCCAGTCACGGGAGCTGTGAATTTCCTGGAAGCAAGAATGTAAGCAACAAGACAAAGGAAGTGGTGAACTCTACTCACACAAGCAGTGCTGGGGAGAAGTTAAGGTTCAGAACCATCAAGATAAATACAGTTAACAATATTTTGCATATTTTCTTGACAACATGTCTCCCCGCATTGTTGTTGGTCCTTTTATGA
Protein sequence

>Msa1223470

MANSNYLILLFSILSFSFLSISTPGESSHFQVKQENEEQERGPFIGVNIGTDVENMASTSDIVSFLKLQKITHVRIYDANPDILKSLSGTKIRVIISVPNNQLLAIGSSNTTAASWIQRNVVAYYPQTLITGISVGDEVLTTVPSSAPLLLPAMESLYNALVSSNLHQQIKVSTPHAASVILDPFPPSQAFFNQTLVSVLLPILQFLSKTESPLMMNLYPYYVFMQNKGVVPLDNALFRPVTPSKEMVDPNTLLHYTNVLDAMIDSAYFSMKNLNVTDVVVLVTETGWPSKGDSKEPYATKDNADTYNSNLIKHVFDHSGTPLNPETTSSVFIYELFNEDLRSPPVSEANWGLFYGNMSAVYLLHVSGIGTFLANDTTNQTYCIAMDGFDSKTLQAALDWACGPGRANCSEIQPGESCYKPNNVKSHASYAFDSYYQKEGKAPGSCDFKGVAMITTTDPSHGSCEFPGSKNVSNKTKEVVNSTHTSSAGEKLRFRTIKINTVNNILHIFLTTCLPALLLVLL*