AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214880 MtrunA17_Chr4g0063941 87.989 358 26 2 1 345 1 354 0.0 577
Msa1214880 MtrunA17_Chr4g0063971 94.203 345 16 1 1 345 1 341 0.0 572
Msa1214880 MtrunA17_Chr6g0476191 70.400 125 36 1 1 125 1 124 2.51e-56 181
Msa1214880 MtrunA17_Chr6g0476221 69.600 125 37 1 1 125 1 124 3.48e-55 178
Msa1214880 MtrunA17_Chr6g0476211 63.830 141 47 2 1 138 1 140 3.04e-54 174
Msa1214880 MtrunA17_Chr4g0003291 65.476 84 27 2 37 119 2 84 1.05e-29 116
Msa1214880 MtrunA17_Chr6g0474121 55.405 74 29 1 67 136 1 74 1.50e-17 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214880 AT1G15340.1 58.879 107 41 3 21 126 5 109 2.84e-35 132
Msa1214880 AT3G15790.1 58.929 112 42 3 18 127 2 111 2.19e-34 127
Msa1214880 AT3G15790.3 58.929 112 42 3 18 127 2 111 2.19e-34 127
Msa1214880 AT3G15790.2 58.929 112 42 3 18 127 2 111 2.19e-34 127
Msa1214880 AT1G15340.2 60.784 51 20 0 22 72 6 56 1.51e-17 82.8

Find 116 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTCTGCTACGTTTCTT+AGG 0.205617 8_1:-75763062 None:intergenic
ACAATTCTCGATGATCTTCT+TGG 0.243354 8_1:-75762993 None:intergenic
GACGACTTGCAGTGAGTTAA+AGG 0.258821 8_1:+75764128 Msa1214880:three_prime_UTR
AGAGTTTATTGTATTCATTC+AGG 0.264815 8_1:-75763782 None:intergenic
ATCGGAGTAAACACATATTT+AGG 0.284238 8_1:-75764069 None:intergenic
ATAGGTTCATATCATATTAC+AGG 0.305966 8_1:-75764027 None:intergenic
CAATCAAATTCCGATATGTT+TGG 0.322423 8_1:-75762954 None:intergenic
ATACTTCTCCAGATGCCTTT+TGG 0.335850 8_1:-75762913 None:intergenic
TCCATCTGGTTGGACCAAAA+AGG 0.337926 8_1:+75760652 Msa1214880:CDS
CGGAATTTGATTGGGGCACT+GGG 0.341266 8_1:+75762964 Msa1214880:CDS
TCCTGCTTTGTATCCTCTGC+TGG 0.352023 8_1:-75763446 None:intergenic
ACGAAGCAAGATGGTGGATC+TGG 0.352435 8_1:+75763536 Msa1214880:CDS
GTCTGGAATTGTTCAGAATA+AGG 0.354977 8_1:+75763364 Msa1214880:CDS
TCAAGGTCTCACATGATTAT+AGG 0.357262 8_1:-75764045 None:intergenic
CAAACATATCGGAATTTGAT+TGG 0.360294 8_1:+75762955 Msa1214880:CDS
CTCCGATTCAAGTATGTGTT+TGG 0.360488 8_1:+75764085 Msa1214880:three_prime_UTR
TCGGAATTTGATTGGGGCAC+TGG 0.370091 8_1:+75762963 Msa1214880:CDS
GGTGCTGTCGGTGCAGCTGC+AGG 0.374683 8_1:+75760593 Msa1214880:CDS
TCCAACGAAACAGGCTCTTC+TGG 0.378309 8_1:-75760620 None:intergenic
ACTTTCTGCTACGTTTCTTA+GGG 0.378522 8_1:-75763061 None:intergenic
TCTTGCTTTGTCTCCTCTGC+TGG 0.384252 8_1:-75763407 None:intergenic
AATCAAATTCCGATATGTTT+GGG 0.391168 8_1:-75762953 None:intergenic
AAACATATCGGAATTTGATT+GGG 0.399027 8_1:+75762956 Msa1214880:CDS
ATGTCTCTTCACAACATAGA+TGG 0.401913 8_1:-75763965 None:intergenic
TCTTGTTTCGTCTCCTCCAC+TGG 0.409874 8_1:-75763485 None:intergenic
TCAGTTGAGAAGGAAGGTTC+TGG 0.420268 8_1:+75760572 Msa1214880:CDS
TCTTGTCGCGTCTTTCTCCT+TGG 0.423678 8_1:-75763666 None:intergenic
TACCAAACACATACTTGAAT+CGG 0.428421 8_1:-75764087 None:intergenic
AACAGGATCACCCGCGAGGC+TGG 0.430826 8_1:+75763635 Msa1214880:CDS
AATAAGGATGTAGAAAAGAT+TGG 0.432064 8_1:+75763380 Msa1214880:CDS
GACAAAGGAGCTGAGGGGTC+TGG 0.432101 8_1:+75763347 Msa1214880:CDS
ATTGTGTTCACTTCACCAAC+AGG 0.434194 8_1:+75762876 Msa1214880:CDS
GCAGGTAGCTCCAACGAAAC+AGG 0.435285 8_1:-75760629 None:intergenic
AAAATAAAGAGGAAGATAAC+AGG 0.438541 8_1:+75763618 Msa1214880:CDS
CGAAGCAAGATGGTGGATCT+GGG 0.446842 8_1:+75763537 Msa1214880:CDS
TTGGAGCTACCTGCTCCATC+TGG 0.447780 8_1:+75760638 Msa1214880:CDS
TCTTGCTTCGTCTCCTCCAC+TGG 0.448961 8_1:-75763524 None:intergenic
ACAAAGCAAGAAGAAAAGAT+TGG 0.458501 8_1:+75763419 Msa1214880:CDS
TAACGGTGGCCCAAACATAT+CGG 0.461224 8_1:+75762944 Msa1214880:CDS
GATCCGTACCAAAAGGCATC+TGG 0.466902 8_1:+75762905 Msa1214880:CDS
GCAAGAAGCTGGTGAAACTA+AGG 0.470297 8_1:+75763145 Msa1214880:CDS
GGTTTCACCTCCAGCCTCGC+GGG 0.474470 8_1:-75763645 None:intergenic
TCTTACAACACAATGTTACA+TGG 0.474654 8_1:-75764002 None:intergenic
TAACGAAAATGAAGATAAGA+AGG 0.479634 8_1:+75763202 Msa1214880:CDS
GAATCAGAGGTGACTGTGAA+TGG 0.479774 8_1:+75763734 Msa1214880:CDS
CAAGTCTCCATCAGCAGTGT+TGG 0.480380 8_1:-75763300 None:intergenic
GCAATATAAGTAGTTTCTCC+AGG 0.485009 8_1:-75763260 None:intergenic
GGGAAATCCAACACTGCTGA+TGG 0.499797 8_1:+75763293 Msa1214880:CDS
GAATGAATACAATAAACTCT+TGG 0.502486 8_1:+75763785 Msa1214880:three_prime_UTR
TGCTGAGAAAACGGCTGAAG+TGG 0.506220 8_1:+75763589 Msa1214880:CDS
TAAACACATATTTAGGATCA+AGG 0.511551 8_1:-75764062 None:intergenic
AGCTACCTGCTCCATCTGGT+TGG 0.512073 8_1:+75760642 Msa1214880:CDS
CAAGGATTTAGAGCCGGAAA+AGG 0.515807 8_1:+75763172 Msa1214880:CDS
TACTTATATTGCAAAGGATG+AGG 0.518178 8_1:+75763271 Msa1214880:CDS
GCCAGCAGAGGATACAAAGC+AGG 0.518269 8_1:+75763445 Msa1214880:CDS
TTATCCTCAGATAGATCTAA+AGG 0.518792 8_1:-75763825 None:intergenic
TGCCCCTACTGCTGAGAAAA+CGG 0.519959 8_1:+75763580 Msa1214880:CDS
TTGGTCCAACCAGATGGAGC+AGG 0.524315 8_1:-75760647 None:intergenic
GTACGGATCTCGTCTCCTGT+TGG 0.530266 8_1:-75762891 None:intergenic
TGAAGATAAGAAGGGAGCAG+AGG 0.540299 8_1:+75763211 Msa1214880:CDS
ACTTATATTGCAAAGGATGA+GGG 0.544601 8_1:+75763272 Msa1214880:CDS
GACGTGGAAATGCAAGAAGC+TGG 0.545188 8_1:+75763134 Msa1214880:CDS
GAGACGAGATCCGTACCAAA+AGG 0.546382 8_1:+75762898 Msa1214880:CDS
CTTTCTGCTACGTTTCTTAG+GGG 0.561874 8_1:-75763060 None:intergenic
ACCAGAAGAGCCTGTTTCGT+TGG 0.564563 8_1:+75760619 Msa1214880:CDS
AGTAGTTTCTCCAGGTCGAA+TGG 0.564767 8_1:-75763252 None:intergenic
GGATGACAAGGATTTAGAGC+CGG 0.567635 8_1:+75763166 Msa1214880:CDS
GAGAAGTATTTGAAAACTAA+CGG 0.568076 8_1:+75762927 Msa1214880:CDS
AGAAAAGATCGGACAGCCAG+TGG 0.571358 8_1:+75763508 Msa1214880:CDS
TTCAAAGAAAGAAGCTTCTG+AGG 0.575578 8_1:+75763091 Msa1214880:CDS
AGCTTCTGAGGACGAAGCAG+AGG 0.581963 8_1:+75763103 Msa1214880:CDS
TGGTTTCACCTCCAGCCTCG+CGG 0.583893 8_1:-75763646 None:intergenic
ATCATCGAGAATTGTTGAGA+AGG 0.584060 8_1:+75763001 Msa1214880:CDS
AGAAACTACTTATATTGCAA+AGG 0.585396 8_1:+75763265 Msa1214880:CDS
TTTCTGCTACGTTTCTTAGG+GGG 0.591296 8_1:-75763059 None:intergenic
AACATATCGGAATTTGATTG+GGG 0.594084 8_1:+75762957 Msa1214880:CDS
GCGAGTTCAGTTGAGAAGGA+AGG 0.595479 8_1:+75760566 Msa1214880:CDS
ACGAAACAAGAAGAAAAGAT+CGG 0.598053 8_1:+75763497 Msa1214880:CDS
ATTGACGACAAAGGAGCTGA+GGG 0.598436 8_1:+75763341 Msa1214880:CDS
AGAAAAGATTGAACAGCCAG+TGG 0.600966 8_1:+75763469 Msa1214880:CDS
GTGGAGGAGACGAAGCAAGA+TGG 0.601635 8_1:+75763527 Msa1214880:CDS
AACGAAAATGAAGATAAGAA+GGG 0.604794 8_1:+75763203 Msa1214880:CDS
GAGGAGACGAAGCAAGATGG+TGG 0.606090 8_1:+75763530 Msa1214880:CDS
CTTATATTGCAAAGGATGAG+GGG 0.609242 8_1:+75763273 Msa1214880:CDS
AAGGAAGGTTCTGGTGCTGT+CGG 0.610581 8_1:+75760581 Msa1214880:CDS
AAAGAGAATATTGACGACAA+AGG 0.610881 8_1:+75763332 Msa1214880:CDS
GAGACTTGGGGCATGAACGT+TGG 0.611539 8_1:-75764213 None:intergenic
GCATGATGAAGCAAACTACA+AGG 0.614302 8_1:+75763691 Msa1214880:CDS
AGTGGATGGCGAAAATAAAG+AGG 0.614877 8_1:+75763607 Msa1214880:CDS
CTCTTCACAACATAGATGGA+TGG 0.614927 8_1:-75763961 None:intergenic
TTGAAAAGAGTTGACACGTG+TGG 0.617152 8_1:-75760232 None:intergenic
TATGAACAAGGCTGAATCAG+AGG 0.619422 8_1:+75763721 Msa1214880:CDS
GTTAAAGAGTCCATTCGACC+TGG 0.624144 8_1:+75763242 Msa1214880:CDS
AATGGCGAGTTCAGTTGAGA+AGG 0.627741 8_1:+75760562 Msa1214880:exon
TATTGACGACAAAGGAGCTG+AGG 0.627859 8_1:+75763340 Msa1214880:CDS
CAAGGTTCATGATATGAACA+AGG 0.632417 8_1:+75763709 Msa1214880:CDS
GAGAAAACGGCTGAAGTGGA+TGG 0.633447 8_1:+75763593 Msa1214880:CDS
CTTACAACACAATGTTACAT+GGG 0.633740 8_1:-75764001 None:intergenic
TGGTGAAACTAAGGATGACA+AGG 0.634779 8_1:+75763154 Msa1214880:CDS
CGTTGGATAACACAAGGACA+TGG 0.639752 8_1:-75764196 None:intergenic
GAAGCAAGATGGTGGATCTG+GGG 0.642765 8_1:+75763538 Msa1214880:CDS
AAAGATTGAACAGCCAGTGG+AGG 0.643021 8_1:+75763472 Msa1214880:CDS
TAGGTTCATATCATATTACA+GGG 0.645360 8_1:-75764026 None:intergenic
CATGAACGTTGGATAACACA+AGG 0.646921 8_1:-75764202 None:intergenic
AGCAGAGGAGACAAAAGACG+TGG 0.647050 8_1:+75763118 Msa1214880:CDS
AAAGATCGGACAGCCAGTGG+AGG 0.654588 8_1:+75763511 Msa1214880:CDS
GAGAATTGTTGAGAAGGTCA+AGG 0.659236 8_1:+75763007 Msa1214880:CDS
AAAGATTGGACTGCCAGCAG+AGG 0.662242 8_1:+75763394 Msa1214880:CDS
AAAGATTGGACAGCCAGCAG+AGG 0.666945 8_1:+75763433 Msa1214880:CDS
CGAGGCTGGAGGTGAAACCA+AGG 0.671676 8_1:+75763649 Msa1214880:CDS
GACGCCTTTAGATCTATCTG+AGG 0.685118 8_1:+75763821 Msa1214880:three_prime_UTR
GGAATTTGATTGGGGCACTG+GGG 0.689173 8_1:+75762965 Msa1214880:CDS
GAATGGAAGCTGAATTGTTG+AGG 0.691183 8_1:+75763751 Msa1214880:exon
TTGACGACAAAGGAGCTGAG+GGG 0.744956 8_1:+75763342 Msa1214880:CDS
AGATAACAGGATCACCCGCG+AGG 0.747714 8_1:+75763631 Msa1214880:CDS
AAGTATTTGAAAACTAACGG+TGG 0.749054 8_1:+75762930 Msa1214880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTGTAATTTTAAATATT+TGG + chr8_1:75761163-75761182 Msa1214880:intron 10.0%
!! AAAAAGAAAAAAAAAATCAT+TGG - chr8_1:75761918-75761937 None:intergenic 10.0%
!! TGATAAATAATTGAAGAAAA+AGG - chr8_1:75760429-75760448 None:intergenic 15.0%
!!! AGTATTGTGATATTTTTTTT+GGG + chr8_1:75760519-75760538 Msa1214880:intron 15.0%
!!! TTGTTTGAATTTTCAATTTT+AGG + chr8_1:75760687-75760706 Msa1214880:intron 15.0%
!!! ATTTTAAATATTTGGTGAAA+TGG + chr8_1:75761171-75761190 Msa1214880:intron 15.0%
!!! TTTTAAATATTTGGTGAAAT+GGG + chr8_1:75761172-75761191 Msa1214880:intron 15.0%
!!! TTTTTTTTACAATGATAGAT+GGG + chr8_1:75761429-75761448 Msa1214880:intron 15.0%
!! TTTACTTCAAGTATTAAAAA+AGG - chr8_1:75761854-75761873 None:intergenic 15.0%
!!! CAGTATTGTGATATTTTTTT+TGG + chr8_1:75760518-75760537 Msa1214880:intron 20.0%
!!! AAAAATTAGAACAACCTTTT+TGG - chr8_1:75760669-75760688 None:intergenic 20.0%
!!! TTTATAACATGCTTTGATTT+TGG + chr8_1:75760791-75760810 Msa1214880:intron 20.0%
!!! TGATTTTGGTTTTCATAATT+AGG + chr8_1:75760805-75760824 Msa1214880:intron 20.0%
!!! GATTTTGGTTTTCATAATTA+GGG + chr8_1:75760806-75760825 Msa1214880:intron 20.0%
!! TAAAATTACAAAACCAAAGT+AGG - chr8_1:75761157-75761176 None:intergenic 20.0%
!! CATCTATCATTGTAAAAAAA+AGG - chr8_1:75761430-75761449 None:intergenic 20.0%
!!! CTTTTTTTTACAATGATAGA+TGG + chr8_1:75761428-75761447 Msa1214880:intron 20.0%
!! AAAAATGTAATAGTTAGACT+TGG - chr8_1:75761519-75761538 None:intergenic 20.0%
!! ATAGTTATTACACATTTACA+TGG - chr8_1:75761750-75761769 None:intergenic 20.0%
!! GTCAGGAAATATTATAATAA+TGG - chr8_1:75761799-75761818 None:intergenic 20.0%
!! ATTGTATAATACATAACTAG+AGG + chr8_1:75762044-75762063 Msa1214880:intron 20.0%
!! TTGTATAATACATAACTAGA+GGG + chr8_1:75762045-75762064 Msa1214880:intron 20.0%
!!! TTTTTAATTGAGTATTCTCA+AGG + chr8_1:75762642-75762661 Msa1214880:intron 20.0%
!!! TTTTAATTGAGTATTCTCAA+GGG + chr8_1:75762643-75762662 Msa1214880:intron 20.0%
!!! AGGTTTTTTTGTTGTTTGTT+TGG - chr8_1:75760387-75760406 None:intergenic 25.0%
! GATAAAGAGAGAAAATACTT+AGG - chr8_1:75760407-75760426 None:intergenic 25.0%
!!! TTTTGGGAATTTTTTTTTGC+AGG + chr8_1:75760535-75760554 Msa1214880:intron 25.0%
!!! TTTTTTTTTGCAGGTGAAAA+TGG + chr8_1:75760544-75760563 Msa1214880:intron 25.0%
!!! TAATTCTTTGATTTTCGTGT+TGG + chr8_1:75760744-75760763 Msa1214880:intron 25.0%
!! AAGATTCATGTCTAAGATTT+AGG + chr8_1:75760897-75760916 Msa1214880:intron 25.0%
!! TATTTTGTTCTCTGAATTTG+AGG + chr8_1:75760920-75760939 Msa1214880:intron 25.0%
! TGTGTTTATTTGTTTGTTCT+AGG + chr8_1:75761364-75761383 Msa1214880:intron 25.0%
! GTGTTTATTTGTTTGTTCTA+GGG + chr8_1:75761365-75761384 Msa1214880:intron 25.0%
! AAAAAAGGTTGTTACATAGT+GGG - chr8_1:75761839-75761858 None:intergenic 25.0%
! TAAAAAAGGTTGTTACATAG+TGG - chr8_1:75761840-75761859 None:intergenic 25.0%
! GAAAAAATAGTGAGTTTGTA+TGG - chr8_1:75762001-75762020 None:intergenic 25.0%
!!! ACAAACTCACTATTTTTTCT+AGG + chr8_1:75762002-75762021 Msa1214880:intron 25.0%
! TGTATAATACATAACTAGAG+GGG + chr8_1:75762046-75762065 Msa1214880:intron 25.0%
!!! TTTTTGGTACATAGAAGAAA+TGG + chr8_1:75762421-75762440 Msa1214880:intron 25.0%
!!! AATTTTTTGATCAAGAGAAG+AGG + chr8_1:75762611-75762630 Msa1214880:intron 25.0%
!! TGTTAACTTTTACAAGACTT+TGG - chr8_1:75762730-75762749 None:intergenic 25.0%
! TCTTGTAAAAGTTAACAACT+TGG + chr8_1:75762733-75762752 Msa1214880:intron 25.0%
!!! AACACAATCTCATTTTTCTT+GGG - chr8_1:75762864-75762883 None:intergenic 25.0%
!!! GAGAAGTATTTGAAAACTAA+CGG + chr8_1:75762927-75762946 Msa1214880:CDS 25.0%
! AATCAAATTCCGATATGTTT+GGG - chr8_1:75762956-75762975 None:intergenic 25.0%
! AAACATATCGGAATTTGATT+GGG + chr8_1:75762956-75762975 Msa1214880:CDS 25.0%
! TAACGAAAATGAAGATAAGA+AGG + chr8_1:75763202-75763221 Msa1214880:CDS 25.0%
! AACGAAAATGAAGATAAGAA+GGG + chr8_1:75763203-75763222 Msa1214880:CDS 25.0%
! AGAAACTACTTATATTGCAA+AGG + chr8_1:75763265-75763284 Msa1214880:CDS 25.0%
! AATAAGGATGTAGAAAAGAT+TGG + chr8_1:75763380-75763399 Msa1214880:CDS 25.0%
! AAAATAAAGAGGAAGATAAC+AGG + chr8_1:75763618-75763637 Msa1214880:CDS 25.0%
! AGAGTTTATTGTATTCATTC+AGG - chr8_1:75763785-75763804 None:intergenic 25.0%
! GAATGAATACAATAAACTCT+TGG + chr8_1:75763785-75763804 Msa1214880:three_prime_UTR 25.0%
! TAGGTTCATATCATATTACA+GGG - chr8_1:75764029-75764048 None:intergenic 25.0%
! ATAGGTTCATATCATATTAC+AGG - chr8_1:75764030-75764049 None:intergenic 25.0%
!! TAAACACATATTTAGGATCA+AGG - chr8_1:75764065-75764084 None:intergenic 25.0%
! GGTTTTCATAATTAGGGATT+TGG + chr8_1:75760812-75760831 Msa1214880:intron 30.0%
TTGAGGAATTGTATAGTTTC+TGG + chr8_1:75760937-75760956 Msa1214880:intron 30.0%
TGAGGAATTGTATAGTTTCT+GGG + chr8_1:75760938-75760957 Msa1214880:intron 30.0%
ACGGTATTTCTTAAATTGTG+AGG + chr8_1:75761015-75761034 Msa1214880:intron 30.0%
TTTGCTTAAAGTGTACATTG+TGG + chr8_1:75761113-75761132 Msa1214880:intron 30.0%
! TCATTGATCTTCTTTTCACT+TGG + chr8_1:75761239-75761258 Msa1214880:intron 30.0%
! ACGACTTTTGTGCATTTTAT+AGG + chr8_1:75761291-75761310 Msa1214880:intron 30.0%
! TTTTGTGCATTTTATAGGTC+TGG + chr8_1:75761296-75761315 Msa1214880:intron 30.0%
! TTTGTGCATTTTATAGGTCT+GGG + chr8_1:75761297-75761316 Msa1214880:intron 30.0%
!! GTGTTTGTTTTCTAAACGAT+AGG + chr8_1:75761466-75761485 Msa1214880:intron 30.0%
AATAGTTAGACTTGGATAAC+AGG - chr8_1:75761511-75761530 None:intergenic 30.0%
!! TTACATTTTTGTTTAGCACC+AGG + chr8_1:75761529-75761548 Msa1214880:intron 30.0%
GAAAGAAAATATACTAAGCC+TGG - chr8_1:75761550-75761569 None:intergenic 30.0%
AAAATATACTTGAGCCAGTA+GGG - chr8_1:75761583-75761602 None:intergenic 30.0%
! TATATTTTCTTTCACACACC+AGG + chr8_1:75761595-75761614 Msa1214880:intron 30.0%
AGTGAGTTTGTATGGAAATT+GGG - chr8_1:75761993-75762012 None:intergenic 30.0%
TAGTGAGTTTGTATGGAAAT+TGG - chr8_1:75761994-75762013 None:intergenic 30.0%
GTATTATACAATAACCCAGA+GGG - chr8_1:75762036-75762055 None:intergenic 30.0%
TGTATTATACAATAACCCAG+AGG - chr8_1:75762037-75762056 None:intergenic 30.0%
! ATTTTCTTGAGACAAACAGT+TGG + chr8_1:75762107-75762126 Msa1214880:intron 30.0%
!!! CTATTACTGCAGTTTTAGAT+TGG + chr8_1:75762163-75762182 Msa1214880:intron 30.0%
AACACAAAAATGGACACATA+TGG - chr8_1:75762208-75762227 None:intergenic 30.0%
ATGACCAAGAAACACAAAAA+TGG - chr8_1:75762218-75762237 None:intergenic 30.0%
CCAAAAACAAAAAACACCAT+AGG - chr8_1:75762408-75762427 None:intergenic 30.0%
!!! CCTATGGTGTTTTTTGTTTT+TGG + chr8_1:75762405-75762424 Msa1214880:intron 30.0%
!! GAACACAATCTCATTTTTCT+TGG - chr8_1:75762865-75762884 None:intergenic 30.0%
AAGTATTTGAAAACTAACGG+TGG + chr8_1:75762930-75762949 Msa1214880:CDS 30.0%
CAATCAAATTCCGATATGTT+TGG - chr8_1:75762957-75762976 None:intergenic 30.0%
CAAACATATCGGAATTTGAT+TGG + chr8_1:75762955-75762974 Msa1214880:CDS 30.0%
AACATATCGGAATTTGATTG+GGG + chr8_1:75762957-75762976 Msa1214880:CDS 30.0%
TACTTATATTGCAAAGGATG+AGG + chr8_1:75763271-75763290 Msa1214880:CDS 30.0%
ACTTATATTGCAAAGGATGA+GGG + chr8_1:75763272-75763291 Msa1214880:CDS 30.0%
AAAGAGAATATTGACGACAA+AGG + chr8_1:75763332-75763351 Msa1214880:CDS 30.0%
ACAAAGCAAGAAGAAAAGAT+TGG + chr8_1:75763419-75763438 Msa1214880:CDS 30.0%
ACGAAACAAGAAGAAAAGAT+CGG + chr8_1:75763497-75763516 Msa1214880:CDS 30.0%
TTATCCTCAGATAGATCTAA+AGG - chr8_1:75763828-75763847 None:intergenic 30.0%
! TAGATGGATGGTACATTTTA+CGG - chr8_1:75763952-75763971 None:intergenic 30.0%
CTTACAACACAATGTTACAT+GGG - chr8_1:75764004-75764023 None:intergenic 30.0%
TCTTACAACACAATGTTACA+TGG - chr8_1:75764005-75764024 None:intergenic 30.0%
ATCGGAGTAAACACATATTT+AGG - chr8_1:75764072-75764091 None:intergenic 30.0%
TACCAAACACATACTTGAAT+CGG - chr8_1:75764090-75764109 None:intergenic 30.0%
AAGAAAAAAAAACGCTGCAA+AGG - chr8_1:75764160-75764179 None:intergenic 30.0%
!!! TGTGCGTGTTTTTAAGTGTA+AGG - chr8_1:75760319-75760338 None:intergenic 35.0%
GAAATACCGTCACGAAAATA+GGG - chr8_1:75761005-75761024 None:intergenic 35.0%
AGAAATACCGTCACGAAAAT+AGG - chr8_1:75761006-75761025 None:intergenic 35.0%
TACATTGTGGCTTACTCTTT+GGG + chr8_1:75761126-75761145 Msa1214880:intron 35.0%
! TCTTTGGGAATTTCCTACTT+TGG + chr8_1:75761141-75761160 Msa1214880:intron 35.0%
ATGATACAAACAACTAGCTC+AGG - chr8_1:75761223-75761242 None:intergenic 35.0%
TTCACTTGGACTGTTAAACA+TGG + chr8_1:75761253-75761272 Msa1214880:intron 35.0%
AAGAAATCATTACCATCCCA+TGG - chr8_1:75761328-75761347 None:intergenic 35.0%
GAAAATATACTTGAGCCAGT+AGG - chr8_1:75761584-75761603 None:intergenic 35.0%
ATACCCACATATAAGTCAGT+AGG + chr8_1:75761701-75761720 Msa1214880:intron 35.0%
TACCCACATATAAGTCAGTA+GGG + chr8_1:75761702-75761721 Msa1214880:intron 35.0%
CATTTACATGGTAAGAAACG+TGG - chr8_1:75761738-75761757 None:intergenic 35.0%
AAAATCATTGGCGATTGCAT+GGG - chr8_1:75761906-75761925 None:intergenic 35.0%
AAAAATCATTGGCGATTGCA+TGG - chr8_1:75761907-75761926 None:intergenic 35.0%
! AAGATCACATCAGGTTAGTT+AGG - chr8_1:75761965-75761984 None:intergenic 35.0%
!!! CTGCAGTTTTAGATTGGAAA+TGG + chr8_1:75762169-75762188 Msa1214880:intron 35.0%
!! GTGTCCATTTTTGTGTTTCT+TGG + chr8_1:75762211-75762230 Msa1214880:intron 35.0%
CTGAATGGAAGGATTAAAGA+GGG + chr8_1:75762289-75762308 Msa1214880:intron 35.0%
ATTAACCTTGTTCAGTCTGA+AGG - chr8_1:75762324-75762343 None:intergenic 35.0%
CAGACTGAACAAGGTTAATT+TGG + chr8_1:75762325-75762344 Msa1214880:intron 35.0%
GCAAAAATGCCGAAATTGTT+AGG - chr8_1:75762514-75762533 None:intergenic 35.0%
CAGTTCTTTCCAAAAAAGTC+AGG + chr8_1:75762834-75762853 Msa1214880:intron 35.0%
ACAATTCTCGATGATCTTCT+TGG - chr8_1:75762996-75763015 None:intergenic 35.0%
ATCATCGAGAATTGTTGAGA+AGG + chr8_1:75763001-75763020 Msa1214880:CDS 35.0%
ACTTTCTGCTACGTTTCTTA+GGG - chr8_1:75763064-75763083 None:intergenic 35.0%
TTCAAAGAAAGAAGCTTCTG+AGG + chr8_1:75763091-75763110 Msa1214880:CDS 35.0%
! TCGTTAACAACTTCCTTTTC+CGG - chr8_1:75763188-75763207 None:intergenic 35.0%
GCAATATAAGTAGTTTCTCC+AGG - chr8_1:75763263-75763282 None:intergenic 35.0%
CTTATATTGCAAAGGATGAG+GGG + chr8_1:75763273-75763292 Msa1214880:CDS 35.0%
! GTCTGGAATTGTTCAGAATA+AGG + chr8_1:75763364-75763383 Msa1214880:CDS 35.0%
CAAGGTTCATGATATGAACA+AGG + chr8_1:75763709-75763728 Msa1214880:CDS 35.0%
ATGTCTCTTCACAACATAGA+TGG - chr8_1:75763968-75763987 None:intergenic 35.0%
TCAAGGTCTCACATGATTAT+AGG - chr8_1:75764048-75764067 None:intergenic 35.0%
TTGAAAAGAGTTGACACGTG+TGG - chr8_1:75760235-75760254 None:intergenic 40.0%
!!! GCGTGTTTTTAAGTGTAAGG+TGG - chr8_1:75760316-75760335 None:intergenic 40.0%
AGAATCTTGAAAACCCTAGC+AGG - chr8_1:75760974-75760993 None:intergenic 40.0%
GTACATTGTGGCTTACTCTT+TGG + chr8_1:75761125-75761144 Msa1214880:intron 40.0%
! TATAGGTCTGGGATTTACCA+TGG + chr8_1:75761308-75761327 Msa1214880:intron 40.0%
! ATAGGTCTGGGATTTACCAT+GGG + chr8_1:75761309-75761328 Msa1214880:intron 40.0%
AACAAACACTATACCCCATG+AGG - chr8_1:75761455-75761474 None:intergenic 40.0%
ACTGTGTTCAACATACGATG+TGG - chr8_1:75761663-75761682 None:intergenic 40.0%
!! CTCCCTACTGACTTATATGT+GGG - chr8_1:75761707-75761726 None:intergenic 40.0%
TATTTCCTGACATTGTGCAC+TGG + chr8_1:75761808-75761827 Msa1214880:intron 40.0%
TTTATCCAGTGCACAATGTC+AGG - chr8_1:75761816-75761835 None:intergenic 40.0%
GCATGGGTTTGTAAAACTCA+GGG - chr8_1:75761890-75761909 None:intergenic 40.0%
TGCATGGGTTTGTAAAACTC+AGG - chr8_1:75761891-75761910 None:intergenic 40.0%
!! AACTAGAGGGGCATCTATAT+TGG + chr8_1:75762058-75762077 Msa1214880:intron 40.0%
TTCTTGGTCATTATGAGCCA+TGG + chr8_1:75762227-75762246 Msa1214880:intron 40.0%
CCTCTTTAATCCTTCCATTC+AGG - chr8_1:75762291-75762310 None:intergenic 40.0%
CCTGAATGGAAGGATTAAAG+AGG + chr8_1:75762288-75762307 Msa1214880:intron 40.0%
AAAAGCCTTCAGACTGAACA+AGG + chr8_1:75762316-75762335 Msa1214880:intron 40.0%
!! TCAGTAAGAGAGTACTAGCA+GGG - chr8_1:75762353-75762372 None:intergenic 40.0%
!! ATCAGTAAGAGAGTACTAGC+AGG - chr8_1:75762354-75762373 None:intergenic 40.0%
! CTTGGTGTGTGAGTTTATGA+TGG - chr8_1:75762452-75762471 None:intergenic 40.0%
TCATAAACTCACACACCAAG+TGG + chr8_1:75762452-75762471 Msa1214880:intron 40.0%
AAATGCCGAAATTGTTAGGC+CGG - chr8_1:75762510-75762529 None:intergenic 40.0%
ACTGCCTATGGTGTTTAACT+AGG + chr8_1:75762556-75762575 Msa1214880:intron 40.0%
AGTGCCTAGTTAAACACCAT+AGG - chr8_1:75762563-75762582 None:intergenic 40.0%
!!! TTGGGTGTTCCTGACTTTTT+TGG - chr8_1:75762846-75762865 None:intergenic 40.0%
ATTGTGTTCACTTCACCAAC+AGG + chr8_1:75762876-75762895 Msa1214880:CDS 40.0%
! ATACTTCTCCAGATGCCTTT+TGG - chr8_1:75762916-75762935 None:intergenic 40.0%
GAGAATTGTTGAGAAGGTCA+AGG + chr8_1:75763007-75763026 Msa1214880:CDS 40.0%
TTTCTGCTACGTTTCTTAGG+GGG - chr8_1:75763062-75763081 None:intergenic 40.0%
CTTTCTGCTACGTTTCTTAG+GGG - chr8_1:75763063-75763082 None:intergenic 40.0%
GACTTTCTGCTACGTTTCTT+AGG - chr8_1:75763065-75763084 None:intergenic 40.0%
TGGTGAAACTAAGGATGACA+AGG + chr8_1:75763154-75763173 Msa1214880:CDS 40.0%
AGAAAAGATTGAACAGCCAG+TGG + chr8_1:75763469-75763488 Msa1214880:CDS 40.0%
AGTGGATGGCGAAAATAAAG+AGG + chr8_1:75763607-75763626 Msa1214880:CDS 40.0%
GCATGATGAAGCAAACTACA+AGG + chr8_1:75763691-75763710 Msa1214880:CDS 40.0%
TATGAACAAGGCTGAATCAG+AGG + chr8_1:75763721-75763740 Msa1214880:CDS 40.0%
GAATGGAAGCTGAATTGTTG+AGG + chr8_1:75763751-75763770 Msa1214880:exon 40.0%
CTCTTCACAACATAGATGGA+TGG - chr8_1:75763964-75763983 None:intergenic 40.0%
CTCCGATTCAAGTATGTGTT+TGG + chr8_1:75764085-75764104 Msa1214880:three_prime_UTR 40.0%
AATGGCGAGTTCAGTTGAGA+AGG + chr8_1:75760562-75760581 Msa1214880:exon 45.0%
TCAGTTGAGAAGGAAGGTTC+TGG + chr8_1:75760572-75760591 Msa1214880:CDS 45.0%
TCCATCTGGTTGGACCAAAA+AGG + chr8_1:75760652-75760671 Msa1214880:CDS 45.0%
!! ACCTTTTTGGTCCAACCAGA+TGG - chr8_1:75760656-75760675 None:intergenic 45.0%
!!! TGGGTTTTGAGTTACCTGCT+AGG + chr8_1:75760957-75760976 Msa1214880:intron 45.0%
!!! GGGTTTTGAGTTACCTGCTA+GGG + chr8_1:75760958-75760977 Msa1214880:intron 45.0%
! CTGTGTCCCTATTTTCGTGA+CGG + chr8_1:75760996-75761015 Msa1214880:intron 45.0%
ACAATGATAGATGGGCCTCA+TGG + chr8_1:75761437-75761456 Msa1214880:intron 45.0%
CAATGATAGATGGGCCTCAT+GGG + chr8_1:75761438-75761457 Msa1214880:intron 45.0%
AATGATAGATGGGCCTCATG+GGG + chr8_1:75761439-75761458 Msa1214880:intron 45.0%
TATACTTGAGCCAGTAGGGA+TGG - chr8_1:75761579-75761598 None:intergenic 45.0%
TTGCTAACCAACACTAAGCC+TGG - chr8_1:75761616-75761635 None:intergenic 45.0%
!! CCTCCCTACTGACTTATATG+TGG - chr8_1:75761708-75761727 None:intergenic 45.0%
CCACATATAAGTCAGTAGGG+AGG + chr8_1:75761705-75761724 Msa1214880:intron 45.0%
TGGGAACTGAAGATCACATC+AGG - chr8_1:75761974-75761993 None:intergenic 45.0%
GCACTGAAGACAAGTATCCA+TGG - chr8_1:75762247-75762266 None:intergenic 45.0%
CTTCCATTCAGGCTATACCT+GGG - chr8_1:75762280-75762299 None:intergenic 45.0%
TGCTAGCTCATAACTGCCTA+TGG + chr8_1:75762389-75762408 Msa1214880:intron 45.0%
TAAACTCACACACCAAGTGG+AGG + chr8_1:75762455-75762474 Msa1214880:intron 45.0%
! GCATTTTTGCCAGTTGAGCT+AGG + chr8_1:75762524-75762543 Msa1214880:intron 45.0%
CCAGTTGAGCTAGGACTTAT+GGG + chr8_1:75762533-75762552 Msa1214880:intron 45.0%
! TCTCCAGATGCCTTTTGGTA+CGG - chr8_1:75762911-75762930 None:intergenic 45.0%
TAACGGTGGCCCAAACATAT+CGG + chr8_1:75762944-75762963 Msa1214880:CDS 45.0%
!! TTCTTAGGGGGCTCACTTTT+TGG - chr8_1:75763050-75763069 None:intergenic 45.0%
GCAAGAAGCTGGTGAAACTA+AGG + chr8_1:75763145-75763164 Msa1214880:CDS 45.0%
! GGATGACAAGGATTTAGAGC+CGG + chr8_1:75763166-75763185 Msa1214880:CDS 45.0%
! CAAGGATTTAGAGCCGGAAA+AGG + chr8_1:75763172-75763191 Msa1214880:CDS 45.0%
TGAAGATAAGAAGGGAGCAG+AGG + chr8_1:75763211-75763230 Msa1214880:CDS 45.0%
GTTAAAGAGTCCATTCGACC+TGG + chr8_1:75763242-75763261 Msa1214880:CDS 45.0%
AGTAGTTTCTCCAGGTCGAA+TGG - chr8_1:75763255-75763274 None:intergenic 45.0%
TATTGACGACAAAGGAGCTG+AGG + chr8_1:75763340-75763359 Msa1214880:CDS 45.0%
ATTGACGACAAAGGAGCTGA+GGG + chr8_1:75763341-75763360 Msa1214880:CDS 45.0%
AAAGATTGAACAGCCAGTGG+AGG + chr8_1:75763472-75763491 Msa1214880:CDS 45.0%
GAATCAGAGGTGACTGTGAA+TGG + chr8_1:75763734-75763753 Msa1214880:CDS 45.0%
GACGCCTTTAGATCTATCTG+AGG + chr8_1:75763821-75763840 Msa1214880:three_prime_UTR 45.0%
GACGACTTGCAGTGAGTTAA+AGG + chr8_1:75764128-75764147 Msa1214880:three_prime_UTR 45.0%
CGTTGGATAACACAAGGACA+TGG - chr8_1:75764199-75764218 None:intergenic 45.0%
GCGAGTTCAGTTGAGAAGGA+AGG + chr8_1:75760566-75760585 Msa1214880:CDS 50.0%
!! AAGGAAGGTTCTGGTGCTGT+CGG + chr8_1:75760581-75760600 Msa1214880:CDS 50.0%
ACCAGAAGAGCCTGTTTCGT+TGG + chr8_1:75760619-75760638 Msa1214880:CDS 50.0%
TCCAACGAAACAGGCTCTTC+TGG - chr8_1:75760623-75760642 None:intergenic 50.0%
! GTCTGGGATTTACCATGGGA+TGG + chr8_1:75761313-75761332 Msa1214880:intron 50.0%
TTTCGACAGACCATCCCTAC+TGG + chr8_1:75761566-75761585 Msa1214880:intron 50.0%
TCACACACCAGGCTTAGTGT+TGG + chr8_1:75761606-75761625 Msa1214880:intron 50.0%
GATGTGGCTCATGCTCTAGT+CGG - chr8_1:75761647-75761666 None:intergenic 50.0%
TTCTAGGTACATACGCCCTC+TGG + chr8_1:75762018-75762037 Msa1214880:intron 50.0%
TCTAGGTACATACGCCCTCT+GGG + chr8_1:75762019-75762038 Msa1214880:intron 50.0%
ATTCAGGCTATACCTGGGAG+AGG - chr8_1:75762275-75762294 None:intergenic 50.0%
TCTCCCAGGTATAGCCTGAA+TGG + chr8_1:75762274-75762293 Msa1214880:intron 50.0%
CCTTCCATTCAGGCTATACC+TGG - chr8_1:75762281-75762300 None:intergenic 50.0%
CCAGGTATAGCCTGAATGGA+AGG + chr8_1:75762278-75762297 Msa1214880:intron 50.0%
GACGTCCGGCCTAACAATTT+CGG + chr8_1:75762502-75762521 Msa1214880:intron 50.0%
GCCAGTTGAGCTAGGACTTA+TGG + chr8_1:75762532-75762551 Msa1214880:intron 50.0%
CCCATAAGTCCTAGCTCAAC+TGG - chr8_1:75762536-75762555 None:intergenic 50.0%
AGGACTTATGGGACTGCCTA+TGG + chr8_1:75762544-75762563 Msa1214880:intron 50.0%
GAGACGAGATCCGTACCAAA+AGG + chr8_1:75762898-75762917 Msa1214880:CDS 50.0%
!! GATCCGTACCAAAAGGCATC+TGG + chr8_1:75762905-75762924 Msa1214880:CDS 50.0%
TCGGAATTTGATTGGGGCAC+TGG + chr8_1:75762963-75762982 Msa1214880:CDS 50.0%
! CGGAATTTGATTGGGGCACT+GGG + chr8_1:75762964-75762983 Msa1214880:CDS 50.0%
!! GGAATTTGATTGGGGCACTG+GGG + chr8_1:75762965-75762984 Msa1214880:CDS 50.0%
!!! TCACTTTTTGGCTCTGCTGG+AGG - chr8_1:75763038-75763057 None:intergenic 50.0%
AGCAGAGGAGACAAAAGACG+TGG + chr8_1:75763118-75763137 Msa1214880:CDS 50.0%
GACGTGGAAATGCAAGAAGC+TGG + chr8_1:75763134-75763153 Msa1214880:CDS 50.0%
GGGAAATCCAACACTGCTGA+TGG + chr8_1:75763293-75763312 Msa1214880:CDS 50.0%
CAAGTCTCCATCAGCAGTGT+TGG - chr8_1:75763303-75763322 None:intergenic 50.0%
TTGACGACAAAGGAGCTGAG+GGG + chr8_1:75763342-75763361 Msa1214880:CDS 50.0%
AAAGATTGGACTGCCAGCAG+AGG + chr8_1:75763394-75763413 Msa1214880:CDS 50.0%
TCTTGCTTTGTCTCCTCTGC+TGG - chr8_1:75763410-75763429 None:intergenic 50.0%
AAAGATTGGACAGCCAGCAG+AGG + chr8_1:75763433-75763452 Msa1214880:CDS 50.0%
TCCTGCTTTGTATCCTCTGC+TGG - chr8_1:75763449-75763468 None:intergenic 50.0%
! TCTTGTTTCGTCTCCTCCAC+TGG - chr8_1:75763488-75763507 None:intergenic 50.0%
AGAAAAGATCGGACAGCCAG+TGG + chr8_1:75763508-75763527 Msa1214880:CDS 50.0%
!! ACGAAGCAAGATGGTGGATC+TGG + chr8_1:75763536-75763555 Msa1214880:CDS 50.0%
!! CGAAGCAAGATGGTGGATCT+GGG + chr8_1:75763537-75763556 Msa1214880:CDS 50.0%
!! GAAGCAAGATGGTGGATCTG+GGG + chr8_1:75763538-75763557 Msa1214880:CDS 50.0%
TGCCCCTACTGCTGAGAAAA+CGG + chr8_1:75763580-75763599 Msa1214880:CDS 50.0%
!! AGCCGTTTTCTCAGCAGTAG+GGG - chr8_1:75763585-75763604 None:intergenic 50.0%
!! CAGCCGTTTTCTCAGCAGTA+GGG - chr8_1:75763586-75763605 None:intergenic 50.0%
!! TCAGCCGTTTTCTCAGCAGT+AGG - chr8_1:75763587-75763606 None:intergenic 50.0%
TGCTGAGAAAACGGCTGAAG+TGG + chr8_1:75763589-75763608 Msa1214880:CDS 50.0%
GAGAAAACGGCTGAAGTGGA+TGG + chr8_1:75763593-75763612 Msa1214880:CDS 50.0%
TCTTGTCGCGTCTTTCTCCT+TGG - chr8_1:75763669-75763688 None:intergenic 50.0%
GCAGGTAGCTCCAACGAAAC+AGG - chr8_1:75760632-75760651 None:intergenic 55.0%
TTGGAGCTACCTGCTCCATC+TGG + chr8_1:75760638-75760657 Msa1214880:CDS 55.0%
AGCTACCTGCTCCATCTGGT+TGG + chr8_1:75760642-75760661 Msa1214880:CDS 55.0%
TTGGTCCAACCAGATGGAGC+AGG - chr8_1:75760650-75760669 None:intergenic 55.0%
GCTCATGCTCTAGTCGGCAT+TGG - chr8_1:75761641-75761660 None:intergenic 55.0%
GTACGGATCTCGTCTCCTGT+TGG - chr8_1:75762894-75762913 None:intergenic 55.0%
!!! GGCTCACTTTTTGGCTCTGC+TGG - chr8_1:75763041-75763060 None:intergenic 55.0%
! AGCTTCTGAGGACGAAGCAG+AGG + chr8_1:75763103-75763122 Msa1214880:CDS 55.0%
GCCAGCAGAGGATACAAAGC+AGG + chr8_1:75763445-75763464 Msa1214880:CDS 55.0%
AAAGATCGGACAGCCAGTGG+AGG + chr8_1:75763511-75763530 Msa1214880:CDS 55.0%
TCTTGCTTCGTCTCCTCCAC+TGG - chr8_1:75763527-75763546 None:intergenic 55.0%
GTGGAGGAGACGAAGCAAGA+TGG + chr8_1:75763527-75763546 Msa1214880:CDS 55.0%
GAGGAGACGAAGCAAGATGG+TGG + chr8_1:75763530-75763549 Msa1214880:CDS 55.0%
AGATAACAGGATCACCCGCG+AGG + chr8_1:75763631-75763650 Msa1214880:CDS 55.0%
TCAGTGCTCACACCTCTCCC+AGG + chr8_1:75762260-75762279 Msa1214880:intron 60.0%
! CACACACCAAGTGGAGGTGC+CGG + chr8_1:75762461-75762480 Msa1214880:intron 60.0%
!! ACACACCAAGTGGAGGTGCC+GGG + chr8_1:75762462-75762481 Msa1214880:intron 60.0%
TTAGGCCGGACGTCTTGACC+GGG - chr8_1:75762496-75762515 None:intergenic 60.0%
GTTAGGCCGGACGTCTTGAC+CGG - chr8_1:75762497-75762516 None:intergenic 60.0%
GACAAAGGAGCTGAGGGGTC+TGG + chr8_1:75763347-75763366 Msa1214880:CDS 60.0%
TGGTTTCACCTCCAGCCTCG+CGG - chr8_1:75763649-75763668 None:intergenic 60.0%
CGAGGCTGGAGGTGAAACCA+AGG + chr8_1:75763649-75763668 Msa1214880:CDS 60.0%
!! CACACCAAGTGGAGGTGCCG+GGG + chr8_1:75762463-75762482 Msa1214880:intron 65.0%
CTTGACCGGGGTTCGAACCC+CGG - chr8_1:75762483-75762502 None:intergenic 65.0%
CGAACCCCGGTCAAGACGTC+CGG + chr8_1:75762488-75762507 Msa1214880:intron 65.0%
TAGGCCGGACGTCTTGACCG+GGG - chr8_1:75762495-75762514 None:intergenic 65.0%
AACAGGATCACCCGCGAGGC+TGG + chr8_1:75763635-75763654 Msa1214880:CDS 65.0%
GGTTTCACCTCCAGCCTCGC+GGG - chr8_1:75763648-75763667 None:intergenic 65.0%
! GGTGCTGTCGGTGCAGCTGC+AGG + chr8_1:75760593-75760612 Msa1214880:CDS 70.0%
CGAACCCCGGCACCTCCACT+TGG - chr8_1:75762470-75762489 None:intergenic 70.0%
!! AGGTGCCGGGGTTCGAACCC+CGG + chr8_1:75762475-75762494 Msa1214880:intron 70.0%
AGGATCACCCGCGAGGCTGG+AGG + chr8_1:75763638-75763657 Msa1214880:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 75760224 75764221 75760224 ID=Msa1214880;Name=Msa1214880
chr8_1 mRNA 75760224 75764221 75760224 ID=Msa1214880-mRNA-1;Parent=Msa1214880;Name=Msa1214880-mRNA-1;_AED=0.02;_eAED=0.02;_QI=191|1|1|1|0.5|0.66|3|458|345
chr8_1 exon 75760224 75760408 75760224 ID=Msa1214880-mRNA-1:exon:25992;Parent=Msa1214880-mRNA-1
chr8_1 exon 75760557 75760673 75760557 ID=Msa1214880-mRNA-1:exon:25993;Parent=Msa1214880-mRNA-1
chr8_1 exon 75762837 75764221 75762837 ID=Msa1214880-mRNA-1:exon:25994;Parent=Msa1214880-mRNA-1
chr8_1 five_prime_UTR 75760224 75760408 75760224 ID=Msa1214880-mRNA-1:five_prime_utr;Parent=Msa1214880-mRNA-1
chr8_1 five_prime_UTR 75760557 75760562 75760557 ID=Msa1214880-mRNA-1:five_prime_utr;Parent=Msa1214880-mRNA-1
chr8_1 CDS 75760563 75760673 75760563 ID=Msa1214880-mRNA-1:cds;Parent=Msa1214880-mRNA-1
chr8_1 CDS 75762837 75763763 75762837 ID=Msa1214880-mRNA-1:cds;Parent=Msa1214880-mRNA-1
chr8_1 three_prime_UTR 75763764 75764221 75763764 ID=Msa1214880-mRNA-1:three_prime_utr;Parent=Msa1214880-mRNA-1
Gene Sequence

>Msa1214880

ATGGCGAGTTCAGTTGAGAAGGAAGGTTCTGGTGCTGTCGGTGCAGCTGCAGGTGCACCAGAAGAGCCTGTTTCGTTGGAGCTACCTGCTCCATCTGGTTGGACCAAAAAGTTCTTTCCAAAAAAGTCAGGAACACCCAAGAAAAATGAGATTGTGTTCACTTCACCAACAGGAGACGAGATCCGTACCAAAAGGCATCTGGAGAAGTATTTGAAAACTAACGGTGGCCCAAACATATCGGAATTTGATTGGGGCACTGGGGAGACTCCAAGAAGATCATCGAGAATTGTTGAGAAGGTCAAGGCAGCTCCTCCAGCAGAGCCAAAAAGTGAGCCCCCTAAGAAACGTAGCAGAAAGTCATCAGCTTCAAAGAAAGAAGCTTCTGAGGACGAAGCAGAGGAGACAAAAGACGTGGAAATGCAAGAAGCTGGTGAAACTAAGGATGACAAGGATTTAGAGCCGGAAAAGGAAGTTGTTAACGAAAATGAAGATAAGAAGGGAGCAGAGGATGCTGATGTTAAAGAGTCCATTCGACCTGGAGAAACTACTTATATTGCAAAGGATGAGGGGAAATCCAACACTGCTGATGGAGACTTGCAAGCATCAAAAGAGAATATTGACGACAAAGGAGCTGAGGGGTCTGGAATTGTTCAGAATAAGGATGTAGAAAAGATTGGACTGCCAGCAGAGGAGACAAAGCAAGAAGAAAAGATTGGACAGCCAGCAGAGGATACAAAGCAGGAAGAAAAGATTGAACAGCCAGTGGAGGAGACGAAACAAGAAGAAAAGATCGGACAGCCAGTGGAGGAGACGAAGCAAGATGGTGGATCTGGGGAAGCAGAGAAATCTGAAGCTGCCCCTACTGCTGAGAAAACGGCTGAAGTGGATGGCGAAAATAAAGAGGAAGATAACAGGATCACCCGCGAGGCTGGAGGTGAAACCAAGGAGAAAGACGCGACAAGAGTGCATGATGAAGCAAACTACAAGGTTCATGATATGAACAAGGCTGAATCAGAGGTGACTGTGAATGGAAGCTGA

Protein sequence

>Msa1214880

MASSVEKEGSGAVGAAAGAPEEPVSLELPAPSGWTKKFFPKKSGTPKKNEIVFTSPTGDEIRTKRHLEKYLKTNGGPNISEFDWGTGETPRRSSRIVEKVKAAPPAEPKSEPPKKRSRKSSASKKEASEDEAEETKDVEMQEAGETKDDKDLEPEKEVVNENEDKKGAEDADVKESIRPGETTYIAKDEGKSNTADGDLQASKENIDDKGAEGSGIVQNKDVEKIGLPAEETKQEEKIGQPAEDTKQEEKIEQPVEETKQEEKIGQPVEETKQDGGSGEAEKSEAAPTAEKTAEVDGENKEEDNRITREAGGETKEKDATRVHDEANYKVHDMNKAESEVTVNGS*