Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197630 | XP_003594356.2 | 87.079 | 712 | 32 | 3 | 1 | 652 | 1 | 712 | 0.0 | 1110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197630 | sp|Q9LTT8|VCS_ARATH | 50.084 | 595 | 217 | 12 | 88 | 609 | 82 | 669 | 4.06e-176 | 540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197630 | G7ISM5 | 87.079 | 712 | 32 | 3 | 1 | 652 | 1 | 712 | 0.0 | 1110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042330 | Msa0197630 | 0.801675 | 8.052522e-49 | -8.615850e-47 |
| Msa0197630 | Msa0269800 | 0.809898 | 1.507268e-50 | -8.615850e-47 |
| Msa0197630 | Msa0572050 | 0.803172 | 3.957258e-49 | -8.615850e-47 |
| Msa0197630 | Msa1154680 | 0.804798 | 1.817039e-49 | -8.615850e-47 |
| Msa0197630 | Msa1256070 | 0.800997 | 1.108208e-48 | -8.615850e-47 |
| Msa0197630 | Msa1279490 | 0.810359 | 1.199090e-50 | -8.615850e-47 |
| Msa0197630 | Msa1300950 | 0.810871 | 9.291062e-51 | -8.615850e-47 |
| Msa0197630 | Msa1404220 | 0.834786 | 2.450843e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197630 | MtrunA17_Chr2g0290921 | 87.079 | 712 | 32 | 3 | 1 | 652 | 1 | 712 | 0.0 | 1110 |
| Msa0197630 | MtrunA17_Chr3g0103121 | 49.515 | 618 | 225 | 9 | 113 | 651 | 118 | 727 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197630 | AT3G13300.3 | 50.084 | 595 | 217 | 12 | 88 | 609 | 82 | 669 | 6.52e-178 | 539 |
| Msa0197630 | AT3G13300.2 | 50.435 | 575 | 211 | 9 | 106 | 609 | 63 | 634 | 1.51e-177 | 540 |
| Msa0197630 | AT3G13300.1 | 50.084 | 595 | 217 | 12 | 88 | 609 | 82 | 669 | 4.12e-177 | 540 |
| Msa0197630 | AT3G13290.1 | 45.839 | 685 | 233 | 17 | 35 | 609 | 1 | 657 | 1.01e-172 | 528 |
Find 150 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCCTATATTAAGCCTTAT+TGG | 0.176068 | 2_1:-15815008 | Msa0197630:CDS |
| TCAGAAGCATACTTAGTAAT+TGG | 0.272461 | 2_1:+15817508 | None:intergenic |
| ATTGACGGGGTGCACCTTAT+TGG | 0.281261 | 2_1:-15815820 | Msa0197630:CDS |
| TGTCATCATGTTTACCAATA+AGG | 0.281331 | 2_1:+15815806 | None:intergenic |
| TACCTCTGGTGCAAGGTTAA+TGG | 0.294894 | 2_1:-15817761 | Msa0197630:CDS |
| CCAGAGGTAGTGGTTGGATT+TGG | 0.310492 | 2_1:+15817775 | None:intergenic |
| ATCTTCACTTCCTGATTTAG+TGG | 0.311677 | 2_1:+15815290 | None:intergenic |
| TAAAATATTAGAAGAACTTT+TGG | 0.311858 | 2_1:+15814602 | None:intergenic |
| AATGATTTACCTTCTCATAA+TGG | 0.315410 | 2_1:-15814696 | Msa0197630:CDS |
| TTGTCTTCTTCAAATATTCA+TGG | 0.327289 | 2_1:-15814759 | Msa0197630:CDS |
| TATTTCAACAGGTGAAGATA+TGG | 0.336490 | 2_1:-15815538 | Msa0197630:intron |
| TAAATCAGGAAGTGAAGATA+TGG | 0.337078 | 2_1:-15815286 | Msa0197630:CDS |
| TCTGATCCTGGTCTTGTGCT+TGG | 0.343033 | 2_1:-15817490 | Msa0197630:CDS |
| TCAGGAAAAGGAATATTATA+AGG | 0.351053 | 2_1:+15817877 | None:intergenic |
| CTGATCCTGGTCTTGTGCTT+GGG | 0.351181 | 2_1:-15817489 | Msa0197630:CDS |
| ACAGAGGGATCAAGATTTGC+TGG | 0.361907 | 2_1:+15814540 | None:intergenic |
| TGGAACTAGTGATGGTTTAC+CGG | 0.362128 | 2_1:-15814988 | Msa0197630:CDS |
| GCAAATCCTGTGGTGAGTTC+AGG | 0.365570 | 2_1:-15817685 | Msa0197630:CDS |
| ATCGCTGGCGCTAGCTGAGC+TGG | 0.366882 | 2_1:+15814575 | None:intergenic |
| ACTATAGGGGCCACTAAATC+AGG | 0.373288 | 2_1:-15815300 | Msa0197630:intron |
| TATGCTGTGCACATAGAGTA+TGG | 0.378753 | 2_1:-15815083 | Msa0197630:CDS |
| TTATGAGAAGGTAAATCATT+TGG | 0.381803 | 2_1:+15814699 | None:intergenic |
| GGAGAAGAGTTCAAATTTGA+AGG | 0.385333 | 2_1:+15818000 | None:intergenic |
| AACCATCACTAGTTCCAATA+AGG | 0.386429 | 2_1:+15814994 | None:intergenic |
| CCTTTCAAATGCCTACCCTT+TGG | 0.391347 | 2_1:+15817598 | None:intergenic |
| TTAGCACTCAGCATCCTTGC+AGG | 0.391477 | 2_1:+15817625 | None:intergenic |
| ATGGATTTGTGTTCAAACTT+TGG | 0.394980 | 2_1:-15815216 | Msa0197630:CDS |
| TGATTGGAGTTTAGTAGTTA+AGG | 0.394995 | 2_1:-15817326 | Msa0197630:intron |
| GTATTTGATACAAAAGCTTC+AGG | 0.397856 | 2_1:+15814732 | None:intergenic |
| AGAAACTTCATCGGTTTCTT+CGG | 0.402138 | 2_1:-15817722 | Msa0197630:CDS |
| TTGGGATGGATCTGCTGATC+TGG | 0.402752 | 2_1:-15814829 | Msa0197630:CDS |
| AAGAACGTCACAGAATTAAC+AGG | 0.403842 | 2_1:+15815464 | None:intergenic |
| GATATTGATGTTAAGTTGCC+AGG | 0.412361 | 2_1:-15817559 | Msa0197630:CDS |
| AATCTTGGACTCGGAGGATG+TGG | 0.415026 | 2_1:+15814645 | None:intergenic |
| CATACGAGTGGCAGTTGGAT+TGG | 0.417514 | 2_1:+15815058 | None:intergenic |
| GAGAGGCTCCTCTGCAGAAA+AGG | 0.420989 | 2_1:+15815864 | None:intergenic |
| GATAACTTGCGAGACAATCT+TGG | 0.422165 | 2_1:+15814630 | None:intergenic |
| TAACCAACCTTCCTCGTAAC+CGG | 0.423093 | 2_1:+15815259 | None:intergenic |
| GTTGTAGCGTTGCCTCGTGC+TGG | 0.432032 | 2_1:-15815143 | Msa0197630:CDS |
| TCTTCTTACCCTCCACCAAC+TGG | 0.436955 | 2_1:-15817919 | Msa0197630:CDS |
| GGGTGATGTTGAAGGATAAG+AGG | 0.442059 | 2_1:+15817850 | None:intergenic |
| ACTAAGTATGCTTCTGATCC+TGG | 0.442672 | 2_1:-15817502 | Msa0197630:CDS |
| GCATTGAGATATTTGCTTCG+AGG | 0.448902 | 2_1:-15817388 | Msa0197630:CDS |
| AGCGTTGCCTCGTGCTGGTT+TGG | 0.449038 | 2_1:-15815138 | Msa0197630:CDS |
| GTTCCAATAAGGCTTAATAT+AGG | 0.450981 | 2_1:+15815005 | None:intergenic |
| ATATTATAAGGAAGATGATA+AGG | 0.452037 | 2_1:+15817889 | None:intergenic |
| AGTGAAGGTGAAGGGAATGA+TGG | 0.454824 | 2_1:+15817979 | None:intergenic |
| GTGGTTGGATTTGGAGATGA+AGG | 0.459237 | 2_1:+15817784 | None:intergenic |
| ATACGAGTGGCAGTTGGATT+GGG | 0.459827 | 2_1:+15815059 | None:intergenic |
| GGGGTGGGATAAGAAGAAGG+AGG | 0.461565 | 2_1:+15817946 | None:intergenic |
| AACCGAGTGTATCTCGTGCT+TGG | 0.461980 | 2_1:-15814848 | Msa0197630:CDS |
| TGATTAAAGAATGCTTCCTC+AGG | 0.464937 | 2_1:+15815167 | None:intergenic |
| AATAGATCTTATATTTGCTA+TGG | 0.469812 | 2_1:-15817451 | Msa0197630:CDS |
| GTTTGAGGCGCATGCATTTG+AGG | 0.471381 | 2_1:+15817829 | None:intergenic |
| AAAATGGGTCTTTGAGTTTG+AGG | 0.475172 | 2_1:+15817814 | None:intergenic |
| ACCGAGTGTATCTCGTGCTT+GGG | 0.476055 | 2_1:-15814847 | Msa0197630:CDS |
| TAACCTTGCACCAGAGGTAG+TGG | 0.486297 | 2_1:+15817765 | None:intergenic |
| AGCTGAGGCTGCATTTCCCC+TGG | 0.486763 | 2_1:+15817541 | None:intergenic |
| ATCTTGGACTCGGAGGATGT+GGG | 0.488565 | 2_1:+15814646 | None:intergenic |
| ATTTCAACAGGTGAAGATAT+GGG | 0.490648 | 2_1:-15815537 | Msa0197630:intron |
| AACATTGATAAGTTGATTGA+CGG | 0.491100 | 2_1:-15815835 | Msa0197630:CDS |
| TGCCTAGTGATTCCGAGTCA+TGG | 0.492895 | 2_1:-15815235 | Msa0197630:CDS |
| AAAATCGACACCATGAAAGC+TGG | 0.495722 | 2_1:-15815898 | Msa0197630:CDS |
| CCAAATCCAACCACTACCTC+TGG | 0.501430 | 2_1:-15817775 | Msa0197630:CDS |
| AGCCTTATTGGAACTAGTGA+TGG | 0.504119 | 2_1:-15814996 | Msa0197630:CDS |
| AAAGAATGCTTCCTCAGGGT+TGG | 0.505226 | 2_1:+15815172 | None:intergenic |
| GGTGGGATAAGAAGAAGGAG+GGG | 0.505535 | 2_1:+15817948 | None:intergenic |
| TGGTGGAGGGTAAGAAGAAG+AGG | 0.506606 | 2_1:+15817924 | None:intergenic |
| CTTGACTGCTCCACACCGTC+CGG | 0.511205 | 2_1:-15815444 | Msa0197630:CDS |
| GACACCATGAAAGCTGGAAA+AGG | 0.513100 | 2_1:-15815892 | Msa0197630:CDS |
| CAATCCAACTGCCACTCGTA+TGG | 0.515705 | 2_1:-15815057 | Msa0197630:CDS |
| GAAGTGAAGATATGGGTATC+CGG | 0.518113 | 2_1:-15815278 | Msa0197630:CDS |
| TTTATTCTTTCTTCTACAGA+GGG | 0.519594 | 2_1:+15814525 | None:intergenic |
| GGGTGGGATAAGAAGAAGGA+GGG | 0.520164 | 2_1:+15817947 | None:intergenic |
| GGTGGAGGGTAAGAAGAAGA+GGG | 0.520848 | 2_1:+15817925 | None:intergenic |
| GGGTATGTACCAGTTGGTGG+AGG | 0.529323 | 2_1:+15817910 | None:intergenic |
| TTTGAGGCGCATGCATTTGA+GGG | 0.531833 | 2_1:+15817830 | None:intergenic |
| GCATTTGAGGGTGATGTTGA+AGG | 0.532058 | 2_1:+15817842 | None:intergenic |
| TGCACAAGATGGTCTCCATC+CGG | 0.541913 | 2_1:+15814969 | None:intergenic |
| ATATTGATGTTAAGTTGCCA+GGG | 0.542257 | 2_1:-15817558 | Msa0197630:CDS |
| TCTTGGACTCGGAGGATGTG+GGG | 0.546239 | 2_1:+15814647 | None:intergenic |
| AGTGTATCTCGTGCTTGGGA+TGG | 0.548410 | 2_1:-15814843 | Msa0197630:CDS |
| TATTATAAGGAAGATGATAA+GGG | 0.549375 | 2_1:+15817890 | None:intergenic |
| GAACACTCAAGAAACTTCAT+CGG | 0.550796 | 2_1:-15817731 | Msa0197630:CDS |
| GGTGATGTTGAAGGATAAGA+GGG | 0.552141 | 2_1:+15817851 | None:intergenic |
| GTGGGATAAGAAGAAGGAGG+GGG | 0.553021 | 2_1:+15817949 | None:intergenic |
| ATTTGCTATGGACTCAAACT+CGG | 0.556206 | 2_1:-15817439 | Msa0197630:CDS |
| GTGACAAGAACGATGTGATC+CGG | 0.557178 | 2_1:+15815425 | None:intergenic |
| AAATCAGGAAGTGAAGATAT+GGG | 0.557317 | 2_1:-15815285 | Msa0197630:CDS |
| TGCAAGGATGCTGAGTGCTA+AGG | 0.558995 | 2_1:-15817623 | Msa0197630:CDS |
| ACATTGATAAGTTGATTGAC+GGG | 0.559167 | 2_1:-15815834 | Msa0197630:CDS |
| TGTCTCCCAAGCACAAGACC+AGG | 0.561886 | 2_1:+15817484 | None:intergenic |
| TCAAGTTCAACGTTGTCTAG+TGG | 0.562243 | 2_1:+15814879 | None:intergenic |
| TGGAGGGTAAGAAGAAGAGG+GGG | 0.562605 | 2_1:+15817927 | None:intergenic |
| CTAATCGACTCTTCATCCAT+TGG | 0.564001 | 2_1:+15815761 | None:intergenic |
| TGGGTATCCGGTTACGAGGA+AGG | 0.566041 | 2_1:-15815266 | Msa0197630:CDS |
| GAAGATATGGGAAGAACGTA+AGG | 0.566964 | 2_1:-15815525 | Msa0197630:CDS |
| TAAGGGTATGTACCAGTTGG+TGG | 0.567746 | 2_1:+15817907 | None:intergenic |
| CTTGGACTCGGAGGATGTGG+GGG | 0.569883 | 2_1:+15814648 | None:intergenic |
| CTTGCACCAGAGGTAGTGGT+TGG | 0.570644 | 2_1:+15817769 | None:intergenic |
| CACAATATATCTGCACAAGA+TGG | 0.572352 | 2_1:+15814958 | None:intergenic |
| CCATTGGCACATTGACAACT+CGG | 0.573103 | 2_1:+15815777 | None:intergenic |
| TATCCGGTTACGAGGAAGGT+TGG | 0.574357 | 2_1:-15815262 | Msa0197630:CDS |
| GTGTAGAAAGTGAAGGTGAA+GGG | 0.575614 | 2_1:+15817971 | None:intergenic |
| CTTTCAGAAGAGCTCACTTG+TGG | 0.576549 | 2_1:+15814792 | None:intergenic |
| GCTGAGTGCTAAGGTTCCAA+AGG | 0.576801 | 2_1:-15817614 | Msa0197630:CDS |
| TTATCAATGTTACATTTGAG+AGG | 0.576910 | 2_1:+15815847 | None:intergenic |
| TCAACGTTGTCTAGTGGCGG+AGG | 0.577409 | 2_1:+15814885 | None:intergenic |
| CCAAAGGGTAGGCATTTGAA+AGG | 0.584118 | 2_1:-15817598 | Msa0197630:CDS |
| GATTAAAGAATGCTTCCTCA+GGG | 0.590055 | 2_1:+15815168 | None:intergenic |
| TTCAGCATCAGCAGATGGCA+CGG | 0.596829 | 2_1:-15815737 | Msa0197630:intron |
| CTGAGTGCTAAGGTTCCAAA+GGG | 0.596970 | 2_1:-15817613 | Msa0197630:CDS |
| GTGGAGGGTAAGAAGAAGAG+GGG | 0.598759 | 2_1:+15817926 | None:intergenic |
| TAATCCATACGAGTGGCAGT+TGG | 0.598947 | 2_1:+15815053 | None:intergenic |
| GGTGTAGAAAGTGAAGGTGA+AGG | 0.601382 | 2_1:+15817970 | None:intergenic |
| CCGAGTTGTCAATGTGCCAA+TGG | 0.602703 | 2_1:-15815777 | Msa0197630:CDS |
| AGCCATTAACCTTGCACCAG+AGG | 0.607779 | 2_1:+15817759 | None:intergenic |
| ACTAGTGATGGTTTACCGGA+TGG | 0.611380 | 2_1:-15814984 | Msa0197630:CDS |
| TGATAAGGGTATGTACCAGT+TGG | 0.611678 | 2_1:+15817904 | None:intergenic |
| GTCCTCAGTCAACACCTGCA+AGG | 0.612837 | 2_1:-15817639 | Msa0197630:CDS |
| GGTATGTACCAGTTGGTGGA+GGG | 0.614592 | 2_1:+15817911 | None:intergenic |
| AGGCATTGTAACTATGAACT+CGG | 0.615489 | 2_1:+15815025 | None:intergenic |
| TTAGCTTCAGCATCAGCAGA+TGG | 0.617067 | 2_1:-15815742 | Msa0197630:CDS |
| AGTTCAACGTTGTCTAGTGG+CGG | 0.617294 | 2_1:+15814882 | None:intergenic |
| ACACAAGCTATTCAACAGTA+CGG | 0.617381 | 2_1:-15814930 | Msa0197630:CDS |
| ATCCATGACTCGGAATCACT+AGG | 0.617708 | 2_1:+15815233 | None:intergenic |
| TGATCAAAACCATTATGAGA+AGG | 0.626111 | 2_1:+15814687 | None:intergenic |
| TGTGGTCTTAAAACAGCAAG+TGG | 0.632046 | 2_1:+15815497 | None:intergenic |
| TTGAACACAAATCCATGACT+CGG | 0.632137 | 2_1:+15815223 | None:intergenic |
| GTGCTAAGGTTCCAAAGGGT+AGG | 0.633726 | 2_1:-15817609 | Msa0197630:CDS |
| TTGCGAGACAATCTTGGACT+CGG | 0.636686 | 2_1:+15814636 | None:intergenic |
| CGAGACAATCTTGGACTCGG+AGG | 0.639124 | 2_1:+15814639 | None:intergenic |
| ACGATGTGATCCGGACGGTG+TGG | 0.639565 | 2_1:+15815434 | None:intergenic |
| ATCCTTGCAGGTGTTGACTG+AGG | 0.639616 | 2_1:+15817637 | None:intergenic |
| TTAACAGGTTTACCATCATG+TGG | 0.641474 | 2_1:+15815479 | None:intergenic |
| CAACCACTACCTCTGGTGCA+AGG | 0.642512 | 2_1:-15817768 | Msa0197630:CDS |
| GAAGAACCTGAACTCACCAC+AGG | 0.642588 | 2_1:+15817679 | None:intergenic |
| TTCGGTGTCAGCAAATCCTG+TGG | 0.642883 | 2_1:-15817695 | Msa0197630:CDS |
| GATATGGGTATCCGGTTACG+AGG | 0.647692 | 2_1:-15815270 | Msa0197630:CDS |
| CATTGATAAGTTGATTGACG+GGG | 0.648694 | 2_1:-15815833 | Msa0197630:CDS |
| TTTGCTTCGAGGTCATACTC+AGG | 0.649426 | 2_1:-15817377 | Msa0197630:CDS |
| ATTGGAGTAACTTCAAGCTG+AGG | 0.665456 | 2_1:+15817526 | None:intergenic |
| AGCAGAACCAAACCAGCACG+AGG | 0.675627 | 2_1:+15815131 | None:intergenic |
| TTTGATACAAAAGCTTCAGG+CGG | 0.676871 | 2_1:+15814735 | None:intergenic |
| TCCCAAGCACGAGATACACT+CGG | 0.682381 | 2_1:+15814846 | None:intergenic |
| GGAAATATAATCCATACGAG+TGG | 0.686141 | 2_1:+15815046 | None:intergenic |
| TATTGATGTTAAGTTGCCAG+GGG | 0.686937 | 2_1:-15817557 | Msa0197630:CDS |
| TTCTTCTGAAGCCAACCCTG+AGG | 0.691321 | 2_1:-15815183 | Msa0197630:CDS |
| CAAGAACGATGTGATCCGGA+CGG | 0.710915 | 2_1:+15815429 | None:intergenic |
| TCACATCGTTCTTGTCACAG+CGG | 0.792088 | 2_1:-15815420 | Msa0197630:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTGAAAAATTAATATTT+GGG | + | chr2_1:15817910-15817929 | None:intergenic | 10.0% |
| !! | TAATTAAGAAAATTTACATT+TGG | + | chr2_1:15817978-15817997 | None:intergenic | 10.0% |
| !! | ATAAACATCTTAATTAGTTA+AGG | - | chr2_1:15814378-15814397 | Msa0197630:intron | 15.0% |
| !! | ATTGAAAGATAATAAACTTA+AGG | + | chr2_1:15815437-15815456 | None:intergenic | 15.0% |
| !! | TAAGTTTATTATCTTTCAAT+TGG | - | chr2_1:15815437-15815456 | Msa0197630:CDS | 15.0% |
| !!! | TAAAATATTAGAAGAACTTT+TGG | + | chr2_1:15816845-15816864 | None:intergenic | 15.0% |
| !! | ATAAAGACAAAAATATATGT+TGG | - | chr2_1:15817103-15817122 | Msa0197630:intron | 15.0% |
| !!! | GCTTTTGAAAAATTAATATT+TGG | + | chr2_1:15817911-15817930 | None:intergenic | 15.0% |
| !! | TATTATAAGGAAGATGATAA+GGG | + | chr2_1:15813557-15813576 | None:intergenic | 20.0% |
| !! | ATATTATAAGGAAGATGATA+AGG | + | chr2_1:15813558-15813577 | None:intergenic | 20.0% |
| !!! | AATAGATCTTATATTTGCTA+TGG | - | chr2_1:15813993-15814012 | Msa0197630:intron | 20.0% |
| !! | AAAAATTTCATAAGTTTACG+AGG | + | chr2_1:15814764-15814783 | None:intergenic | 20.0% |
| !!! | TTATGAAATTTTTTGCAGTT+AGG | - | chr2_1:15814771-15814790 | Msa0197630:CDS | 20.0% |
| !!! | GGATTGAAAGTATAATAAAA+GGG | + | chr2_1:15815052-15815071 | None:intergenic | 20.0% |
| !!! | TGGATTGAAAGTATAATAAA+AGG | + | chr2_1:15815053-15815072 | None:intergenic | 20.0% |
| !! | ATGACAAACATAAACATAAA+AGG | + | chr2_1:15815173-15815192 | None:intergenic | 20.0% |
| !! | TAAAGGAAACATATACAAAA+CGG | + | chr2_1:15816125-15816144 | None:intergenic | 20.0% |
| !! | TATATGTTTCCTTTACTATA+GGG | - | chr2_1:15816130-15816149 | Msa0197630:intron | 20.0% |
| !!! | AGCATATATTGTGTTTTTTT+TGG | + | chr2_1:15816347-15816366 | None:intergenic | 20.0% |
| !! | AAAATCTGAAAAAGATAATC+TGG | - | chr2_1:15816939-15816958 | Msa0197630:intron | 20.0% |
| !! | CTTAATAATATGATACTTGA+TGG | + | chr2_1:15817140-15817159 | None:intergenic | 20.0% |
| !! | ATAAAGACAAAATTATGTGT+TGG | + | chr2_1:15817335-15817354 | None:intergenic | 20.0% |
| !!! | TTGATCTTTTTATGAAAAGT+GGG | + | chr2_1:15817379-15817398 | None:intergenic | 20.0% |
| !!! | TTTGATCTTTTTATGAAAAG+TGG | + | chr2_1:15817380-15817399 | None:intergenic | 20.0% |
| !!! | GTTTGTTGTTGATTTTGATT+TGG | + | chr2_1:15813372-15813391 | None:intergenic | 25.0% |
| !! | AAGCTTTTGCAAATCAAATT+GGG | + | chr2_1:15813394-15813413 | None:intergenic | 25.0% |
| !! | AAAGCTTTTGCAAATCAAAT+TGG | + | chr2_1:15813395-15813414 | None:intergenic | 25.0% |
| ! | TCAGGAAAAGGAATATTATA+AGG | + | chr2_1:15813570-15813589 | None:intergenic | 25.0% |
| !!! | AGTTTTGATGATTTTGTTTG+TGG | - | chr2_1:15814095-15814114 | Msa0197630:intron | 25.0% |
| ! | TTAGTAGTTAAGGTATAGAA+TGG | - | chr2_1:15814128-15814147 | Msa0197630:intron | 25.0% |
| ! | ATCAAAACATAACATCAAAG+TGG | + | chr2_1:15814247-15814266 | None:intergenic | 25.0% |
| !! | TTTGATGCTTTTGTAATCAT+TGG | - | chr2_1:15814261-15814280 | Msa0197630:intron | 25.0% |
| ! | TTAAGATGTTTATCCAAACA+AGG | + | chr2_1:15814322-15814341 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAAGATATCA+TGG | - | chr2_1:15814548-15814567 | Msa0197630:CDS | 25.0% |
| ! | TTTGAACTTATCAACTGTTT+GGG | + | chr2_1:15814618-15814637 | None:intergenic | 25.0% |
| ! | ATTTGAACTTATCAACTGTT+TGG | + | chr2_1:15814619-15814638 | None:intergenic | 25.0% |
| ! | AAAGGAATATAACTTGACTA+AGG | + | chr2_1:15814659-15814678 | None:intergenic | 25.0% |
| ! | AGATTTGATATCCACAAAAT+TGG | + | chr2_1:15815085-15815104 | None:intergenic | 25.0% |
| !!! | AAACATAAAAGGTATTTACC+TGG | + | chr2_1:15815162-15815181 | None:intergenic | 25.0% |
| ! | TTTCATATGGAAAATCAATG+AGG | - | chr2_1:15815273-15815292 | Msa0197630:CDS | 25.0% |
| ! | TTCATATGGAAAATCAATGA+GGG | - | chr2_1:15815274-15815293 | Msa0197630:CDS | 25.0% |
| ! | ATCACTATTACTTGTTTATG+AGG | + | chr2_1:15815400-15815419 | None:intergenic | 25.0% |
| ! | ACTATAAGCTAACACTTTAA+AGG | + | chr2_1:15815471-15815490 | None:intergenic | 25.0% |
| !!! | GAGATTTTAATTGTTGCTAT+TGG | - | chr2_1:15815510-15815529 | Msa0197630:CDS | 25.0% |
| ! | TTATCAATGTTACATTTGAG+AGG | + | chr2_1:15815600-15815619 | None:intergenic | 25.0% |
| !!! | AACATTGATAAGTTGATTGA+CGG | - | chr2_1:15815609-15815628 | Msa0197630:intron | 25.0% |
| ! | CATGTTATTGTATTACATCT+TGG | - | chr2_1:15815841-15815860 | Msa0197630:CDS | 25.0% |
| !! | AGAAAAGTCTTATCATTGTT+TGG | - | chr2_1:15815878-15815897 | Msa0197630:CDS | 25.0% |
| ! | GTATATGTTTCCTTTACTAT+AGG | - | chr2_1:15816129-15816148 | Msa0197630:intron | 25.0% |
| ! | ATATGTTTCCTTTACTATAG+GGG | - | chr2_1:15816131-15816150 | Msa0197630:intron | 25.0% |
| ! | TTGTCTTCTTCAAATATTCA+TGG | - | chr2_1:15816685-15816704 | Msa0197630:intron | 25.0% |
| ! | TTATGAGAAGGTAAATCATT+TGG | + | chr2_1:15816748-15816767 | None:intergenic | 25.0% |
| ! | AATGATTTACCTTCTCATAA+TGG | - | chr2_1:15816748-15816767 | Msa0197630:intron | 25.0% |
| ! | TTTATTCTTTCTTCTACAGA+GGG | + | chr2_1:15816922-15816941 | None:intergenic | 25.0% |
| !! | TTTTATTCTTTCTTCTACAG+AGG | + | chr2_1:15816923-15816942 | None:intergenic | 25.0% |
| ! | GTTCATCAATAACCTTAATT+AGG | - | chr2_1:15817268-15817287 | Msa0197630:intron | 25.0% |
| ! | AGCATCATATAAATATGTCA+AGG | + | chr2_1:15817295-15817314 | None:intergenic | 25.0% |
| !! | TAAACATGTTATTTGTGTAC+TGG | + | chr2_1:15817643-15817662 | None:intergenic | 25.0% |
| ! | ATAACATGTTTATCATCGAT+AGG | - | chr2_1:15817651-15817670 | Msa0197630:CDS | 25.0% |
| !!! | TAAAACCTTTGGTTTTATTG+TGG | + | chr2_1:15817780-15817799 | None:intergenic | 25.0% |
| !! | ACAATAAAACCAAAGGTTTT+AGG | - | chr2_1:15817779-15817798 | Msa0197630:CDS | 25.0% |
| !!! | GTTGTTTTTGATGTTTGAAA+TGG | + | chr2_1:15817805-15817824 | None:intergenic | 25.0% |
| ! | GATTTGCAAAAGCTTTTCAA+AGG | - | chr2_1:15813399-15813418 | Msa0197630:intron | 30.0% |
| GATGAAGGAGATTGAAAAAT+GGG | + | chr2_1:15813648-15813667 | None:intergenic | 30.0% | |
| AGATGAAGGAGATTGAAAAA+TGG | + | chr2_1:15813649-15813668 | None:intergenic | 30.0% | |
| ! | ATATTGATGTTAAGTTGCCA+GGG | - | chr2_1:15813886-15813905 | Msa0197630:intron | 30.0% |
| ! | TCAGAAGCATACTTAGTAAT+TGG | + | chr2_1:15813939-15813958 | None:intergenic | 30.0% |
| !! | ATGATTTTGTTTGTGGTGAT+TGG | - | chr2_1:15814102-15814121 | Msa0197630:intron | 30.0% |
| TGATTGGAGTTTAGTAGTTA+AGG | - | chr2_1:15814118-15814137 | Msa0197630:intron | 30.0% | |
| GTTAGTTAAGTAGTCAGTTA+TGG | - | chr2_1:15814171-15814190 | Msa0197630:intron | 30.0% | |
| !!! | AGTTAAGGTATTGTTTTGCA+TGG | - | chr2_1:15814393-15814412 | Msa0197630:intron | 30.0% |
| ATTAAGATGTTTATCCAACC+AGG | + | chr2_1:15814425-15814444 | None:intergenic | 30.0% | |
| AAGATATCATGGAGAGTTTA+TGG | - | chr2_1:15814559-15814578 | Msa0197630:CDS | 30.0% | |
| AACTGTTTGGGAGAATTTAT+GGG | + | chr2_1:15814606-15814625 | None:intergenic | 30.0% | |
| TTGATATCCACAAAATTGGA+GGG | + | chr2_1:15815081-15815100 | None:intergenic | 30.0% | |
| TTTGATATCCACAAAATTGG+AGG | + | chr2_1:15815082-15815101 | None:intergenic | 30.0% | |
| AATGCATGAGCATATTCAAA+GGG | + | chr2_1:15815228-15815247 | None:intergenic | 30.0% | |
| ATAACTCTTCCAGTAATTTG+AGG | + | chr2_1:15815319-15815338 | None:intergenic | 30.0% | |
| ! | AAGTGTTAGCTTATAGTTGT+TGG | - | chr2_1:15815474-15815493 | Msa0197630:CDS | 30.0% |
| CAACAATTAAAATCTCCTGT+TGG | + | chr2_1:15815506-15815525 | None:intergenic | 30.0% | |
| !! | ACATTGATAAGTTGATTGAC+GGG | - | chr2_1:15815610-15815629 | Msa0197630:intron | 30.0% |
| TGTCATCATGTTTACCAATA+AGG | + | chr2_1:15815641-15815660 | None:intergenic | 30.0% | |
| AGCGAAAACAAATTGGATAA+CGG | + | chr2_1:15815768-15815787 | None:intergenic | 30.0% | |
| TTTCACTAGCGAAAACAAAT+TGG | + | chr2_1:15815775-15815794 | None:intergenic | 30.0% | |
| CAATAACATGAACGACTTAA+AGG | + | chr2_1:15815831-15815850 | None:intergenic | 30.0% | |
| !! | GTTTGGTCTTTTATTTCAAC+AGG | - | chr2_1:15815895-15815914 | Msa0197630:CDS | 30.0% |
| TATTTCAACAGGTGAAGATA+TGG | - | chr2_1:15815906-15815925 | Msa0197630:CDS | 30.0% | |
| ATTTCAACAGGTGAAGATAT+GGG | - | chr2_1:15815907-15815926 | Msa0197630:CDS | 30.0% | |
| ! | TTTCCAATAATGGAAAAGCT+AGG | + | chr2_1:15816058-15816077 | None:intergenic | 30.0% |
| ! | CTTTTCCATTATTGGAAACA+TGG | - | chr2_1:15816060-15816079 | Msa0197630:intron | 30.0% |
| ATGTACCATGTTTCCAATAA+TGG | + | chr2_1:15816068-15816087 | None:intergenic | 30.0% | |
| TAAATCAGGAAGTGAAGATA+TGG | - | chr2_1:15816158-15816177 | Msa0197630:intron | 30.0% | |
| AAATCAGGAAGTGAAGATAT+GGG | - | chr2_1:15816159-15816178 | Msa0197630:intron | 30.0% | |
| ATGGATTTGTGTTCAAACTT+TGG | - | chr2_1:15816228-15816247 | Msa0197630:intron | 30.0% | |
| ! | ATGCCTATATTAAGCCTTAT+TGG | - | chr2_1:15816436-15816455 | Msa0197630:intron | 30.0% |
| GTTCCAATAAGGCTTAATAT+AGG | + | chr2_1:15816442-15816461 | None:intergenic | 30.0% | |
| GTATTTGATACAAAAGCTTC+AGG | + | chr2_1:15816715-15816734 | None:intergenic | 30.0% | |
| TGATCAAAACCATTATGAGA+AGG | + | chr2_1:15816760-15816779 | None:intergenic | 30.0% | |
| ! | AAAATATATGTTGGCCTACA+TGG | - | chr2_1:15817112-15817131 | Msa0197630:intron | 30.0% |
| ATATGTCAAGGACCTAATTA+AGG | + | chr2_1:15817283-15817302 | None:intergenic | 30.0% | |
| ! | AAATTATGTGTTGGTATTCG+TGG | + | chr2_1:15817326-15817345 | None:intergenic | 30.0% |
| ! | CATTGACTATGTCATTGAAT+AGG | + | chr2_1:15817448-15817467 | None:intergenic | 30.0% |
| AATGAGAGAGTCTTTCATTT+GGG | + | chr2_1:15817480-15817499 | None:intergenic | 30.0% | |
| GTTAAACCTTAACAATTGCA+AGG | + | chr2_1:15817508-15817527 | None:intergenic | 30.0% | |
| GCAATTGTTAAGGTTTAACT+CGG | - | chr2_1:15817509-15817528 | Msa0197630:CDS | 30.0% | |
| CAATTGTTAAGGTTTAACTC+GGG | - | chr2_1:15817510-15817529 | Msa0197630:CDS | 30.0% | |
| ! | TTTGAGGAGTAACTTTTGTA+TGG | - | chr2_1:15817680-15817699 | Msa0197630:CDS | 30.0% |
| CAAAACCACAATAAAACCAA+AGG | - | chr2_1:15817772-15817791 | Msa0197630:CDS | 30.0% | |
| AGCATGAAAATGATTTCACA+AGG | - | chr2_1:15817928-15817947 | Msa0197630:CDS | 30.0% | |
| GCATGAAAATGATTTCACAA+GGG | - | chr2_1:15817929-15817948 | Msa0197630:CDS | 30.0% | |
| AGTAAGCAGAAGCAAATTAA+AGG | - | chr2_1:15818045-15818064 | Msa0197630:CDS | 30.0% | |
| AAGATGCAAAAATCTGACAA+TGG | + | chr2_1:15818086-15818105 | None:intergenic | 30.0% | |
| GGAGAAGAGTTCAAATTTGA+AGG | + | chr2_1:15813447-15813466 | None:intergenic | 35.0% | |
| !! | ATAAGAGGGTTTTCAGGAAA+AGG | + | chr2_1:15813582-15813601 | None:intergenic | 35.0% |
| ! | AAAATGGGTCTTTGAGTTTG+AGG | + | chr2_1:15813633-15813652 | None:intergenic | 35.0% |
| GAACACTCAAGAAACTTCAT+CGG | - | chr2_1:15813713-15813732 | Msa0197630:intron | 35.0% | |
| !! | AGAAACTTCATCGGTTTCTT+CGG | - | chr2_1:15813722-15813741 | Msa0197630:intron | 35.0% |
| ! | GATATTGATGTTAAGTTGCC+AGG | - | chr2_1:15813885-15813904 | Msa0197630:intron | 35.0% |
| ! | TATTGATGTTAAGTTGCCAG+GGG | - | chr2_1:15813887-15813906 | Msa0197630:intron | 35.0% |
| !! | ATTTGCTATGGACTCAAACT+CGG | - | chr2_1:15814005-15814024 | Msa0197630:intron | 35.0% |
| TATGGCTTCATGGTCATATT+CGG | - | chr2_1:15814189-15814208 | Msa0197630:intron | 35.0% | |
| !!! | AGCTGAAGTATTGTTTTGCA+TGG | - | chr2_1:15814292-15814311 | Msa0197630:intron | 35.0% |
| CAACTGTTTGGGAGAATTTA+TGG | + | chr2_1:15814607-15814626 | None:intergenic | 35.0% | |
| TAACTTGACTAAGGACTGTT+TGG | + | chr2_1:15814650-15814669 | None:intergenic | 35.0% | |
| TTTGCAGTTAGGAAATGTGT+TGG | - | chr2_1:15814782-15814801 | Msa0197630:CDS | 35.0% | |
| TTGCAGTTAGGAAATGTGTT+GGG | - | chr2_1:15814783-15814802 | Msa0197630:CDS | 35.0% | |
| TTGCAGAAAGTCGAGATATA+TGG | - | chr2_1:15814888-15814907 | Msa0197630:CDS | 35.0% | |
| TGATATCCACAAAATTGGAG+GGG | + | chr2_1:15815080-15815099 | None:intergenic | 35.0% | |
| !! | TATGTAGAGAGTATCAGACA+TGG | - | chr2_1:15815106-15815125 | Msa0197630:CDS | 35.0% |
| GAATGCATGAGCATATTCAA+AGG | + | chr2_1:15815229-15815248 | None:intergenic | 35.0% | |
| AATTACTGGAAGAGTTATCC+TGG | - | chr2_1:15815321-15815340 | Msa0197630:intron | 35.0% | |
| ACTCTCTCCTAGTATTTGAA+TGG | + | chr2_1:15815347-15815366 | None:intergenic | 35.0% | |
| !! | CATTGATAAGTTGATTGACG+GGG | - | chr2_1:15815611-15815630 | Msa0197630:intron | 35.0% |
| AACGGGAAAAAATGTAAAGC+AGG | + | chr2_1:15815750-15815769 | None:intergenic | 35.0% | |
| GCGAAAACAAATTGGATAAC+GGG | + | chr2_1:15815767-15815786 | None:intergenic | 35.0% | |
| ACATGAACGACTTAAAGGTA+AGG | + | chr2_1:15815826-15815845 | None:intergenic | 35.0% | |
| TTAACAGGTTTACCATCATG+TGG | + | chr2_1:15815968-15815987 | None:intergenic | 35.0% | |
| AAGAACGTCACAGAATTAAC+AGG | + | chr2_1:15815983-15816002 | None:intergenic | 35.0% | |
| !! | GTTCCTAGCTTTTCCATTAT+TGG | - | chr2_1:15816052-15816071 | Msa0197630:intron | 35.0% |
| ATCTTCACTTCCTGATTTAG+TGG | + | chr2_1:15816157-15816176 | None:intergenic | 35.0% | |
| TTGAACACAAATCCATGACT+CGG | + | chr2_1:15816224-15816243 | None:intergenic | 35.0% | |
| GATTAAAGAATGCTTCCTCA+GGG | + | chr2_1:15816279-15816298 | None:intergenic | 35.0% | |
| TGATTAAAGAATGCTTCCTC+AGG | + | chr2_1:15816280-15816299 | None:intergenic | 35.0% | |
| GGAAATATAATCCATACGAG+TGG | + | chr2_1:15816401-15816420 | None:intergenic | 35.0% | |
| ! | AGGCATTGTAACTATGAACT+CGG | + | chr2_1:15816422-15816441 | None:intergenic | 35.0% |
| AACCATCACTAGTTCCAATA+AGG | + | chr2_1:15816453-15816472 | None:intergenic | 35.0% | |
| CACAATATATCTGCACAAGA+TGG | + | chr2_1:15816489-15816508 | None:intergenic | 35.0% | |
| ACACAAGCTATTCAACAGTA+CGG | - | chr2_1:15816514-15816533 | Msa0197630:intron | 35.0% | |
| TTTGATACAAAAGCTTCAGG+CGG | + | chr2_1:15816712-15816731 | None:intergenic | 35.0% | |
| CTGGTTTCAATATTACCTAC+TGG | - | chr2_1:15817413-15817432 | Msa0197630:CDS | 35.0% | |
| AATAGGAAAGATGAACCAGT+AGG | + | chr2_1:15817431-15817450 | None:intergenic | 35.0% | |
| GAATGAGAGAGTCTTTCATT+TGG | + | chr2_1:15817481-15817500 | None:intergenic | 35.0% | |
| TCTTGACCTTGCAATTGTTA+AGG | - | chr2_1:15817499-15817518 | Msa0197630:CDS | 35.0% | |
| ! | CATCGATAGGAAACATTTTG+AGG | - | chr2_1:15817664-15817683 | Msa0197630:CDS | 35.0% |
| TTGAAATGGCCTAAAACCTT+TGG | + | chr2_1:15817791-15817810 | None:intergenic | 35.0% | |
| AAAATGATTTCACAAGGGAG+AGG | - | chr2_1:15817934-15817953 | Msa0197630:CDS | 35.0% | |
| AAAAATCTGACAATGGATGG+AGG | + | chr2_1:15818079-15818098 | None:intergenic | 35.0% | |
| TGCAAAAATCTGACAATGGA+TGG | + | chr2_1:15818082-15818101 | None:intergenic | 35.0% | |
| GTGTAGAAAGTGAAGGTGAA+GGG | + | chr2_1:15813476-15813495 | None:intergenic | 40.0% | |
| ! | TGATAAGGGTATGTACCAGT+TGG | + | chr2_1:15813543-15813562 | None:intergenic | 40.0% |
| ! | TGAAGGATAAGAGGGTTTTC+AGG | + | chr2_1:15813588-15813607 | None:intergenic | 40.0% |
| GGTGATGTTGAAGGATAAGA+GGG | + | chr2_1:15813596-15813615 | None:intergenic | 40.0% | |
| !! | ATCGGTTTCTTCGGAGTTTT+CGG | - | chr2_1:15813731-15813750 | Msa0197630:intron | 40.0% |
| ATTGGAGTAACTTCAAGCTG+AGG | + | chr2_1:15813921-15813940 | None:intergenic | 40.0% | |
| ACTAAGTATGCTTCTGATCC+TGG | - | chr2_1:15813942-15813961 | Msa0197630:intron | 40.0% | |
| GCATTGAGATATTTGCTTCG+AGG | - | chr2_1:15814056-15814075 | Msa0197630:intron | 40.0% | |
| AGTAGTCAGTTATGGCTTCA+TGG | - | chr2_1:15814179-15814198 | Msa0197630:intron | 40.0% | |
| ATGGCTTCATGGTCATATTC+GGG | - | chr2_1:15814190-15814209 | Msa0197630:intron | 40.0% | |
| ! | TTTGCATGGTTTGCCTTGTT+TGG | - | chr2_1:15814306-15814325 | Msa0197630:intron | 40.0% |
| ! | TGTTTTGCATGGTTTTCTCC+TGG | - | chr2_1:15814404-15814423 | Msa0197630:intron | 40.0% |
| TACGCAGTGATTACAACGAA+AGG | + | chr2_1:15814677-15814696 | None:intergenic | 40.0% | |
| CTCATGGCAACATACAACAT+AGG | + | chr2_1:15814711-15814730 | None:intergenic | 40.0% | |
| ATCTCGACTTTCTGCAAACA+AGG | + | chr2_1:15814885-15814904 | None:intergenic | 40.0% | |
| ATATCCACAAAATTGGAGGG+GGG | + | chr2_1:15815078-15815097 | None:intergenic | 40.0% | |
| GATATCCACAAAATTGGAGG+GGG | + | chr2_1:15815079-15815098 | None:intergenic | 40.0% | |
| ! | AAGGTATTTACCTGGCTAAC+AGG | + | chr2_1:15815154-15815173 | None:intergenic | 40.0% |
| ! | ACTGATGGGGAGTTTTCATA+TGG | - | chr2_1:15815260-15815279 | Msa0197630:CDS | 40.0% |
| GAAGACAAGCCTCAAATTAC+TGG | - | chr2_1:15815307-15815326 | Msa0197630:intron | 40.0% | |
| ATCCTGGCCATTCAAATACT+AGG | - | chr2_1:15815337-15815356 | Msa0197630:intron | 40.0% | |
| AGTTGTTGGAATTGACCAAC+AGG | - | chr2_1:15815488-15815507 | Msa0197630:CDS | 40.0% | |
| !!! | TGGTGTCGATTTTGAGGATA+CGG | + | chr2_1:15815539-15815558 | None:intergenic | 40.0% |
| !!! | CTTTCATGGTGTCGATTTTG+AGG | + | chr2_1:15815545-15815564 | None:intergenic | 40.0% |
| AAAATCGACACCATGAAAGC+TGG | - | chr2_1:15815546-15815565 | Msa0197630:intron | 40.0% | |
| ! | TTCACCTTTTCCAGCTTTCA+TGG | + | chr2_1:15815559-15815578 | None:intergenic | 40.0% |
| ! | CTAATCGACTCTTCATCCAT+TGG | + | chr2_1:15815686-15815705 | None:intergenic | 40.0% |
| GAAGATATGGGAAGAACGTA+AGG | - | chr2_1:15815919-15815938 | Msa0197630:CDS | 40.0% | |
| ! | TGTGGTCTTAAAACAGCAAG+TGG | + | chr2_1:15815950-15815969 | None:intergenic | 40.0% |
| !!! | GCTGTTTTAAGACCACATGA+TGG | - | chr2_1:15815953-15815972 | Msa0197630:intron | 40.0% |
| TTTAGTGGCCCCTATAGTAA+AGG | + | chr2_1:15816142-15816161 | None:intergenic | 40.0% | |
| GAAGTGAAGATATGGGTATC+CGG | - | chr2_1:15816166-15816185 | Msa0197630:intron | 40.0% | |
| TATGCTGTGCACATAGAGTA+TGG | - | chr2_1:15816361-15816380 | Msa0197630:intron | 40.0% | |
| !! | AGCCTTATTGGAACTAGTGA+TGG | - | chr2_1:15816448-15816467 | Msa0197630:intron | 40.0% |
| TGGAACTAGTGATGGTTTAC+CGG | - | chr2_1:15816456-15816475 | Msa0197630:intron | 40.0% | |
| TCAAGTTCAACGTTGTCTAG+TGG | + | chr2_1:15816568-15816587 | None:intergenic | 40.0% | |
| ! | GATAACTTGCGAGACAATCT+TGG | + | chr2_1:15816817-15816836 | None:intergenic | 40.0% |
| GATACTTGATGGAACCATGT+AGG | + | chr2_1:15817129-15817148 | None:intergenic | 40.0% | |
| AGCACAATTGAAGAGTCTTG+TGG | + | chr2_1:15817177-15817196 | None:intergenic | 40.0% | |
| CTTGCTAGCACGCTAATTAA+GGG | + | chr2_1:15817226-15817245 | None:intergenic | 40.0% | |
| ! | ACTTGCTAGCACGCTAATTA+AGG | + | chr2_1:15817227-15817246 | None:intergenic | 40.0% |
| ATCAAATGCAACTAGAGTGC+TGG | - | chr2_1:15817394-15817413 | Msa0197630:CDS | 40.0% | |
| ! | AGTCTTTCATTTGGGCTAGA+TGG | + | chr2_1:15817472-15817491 | None:intergenic | 40.0% |
| ACGACGTAATTAGGGTAAGA+GGG | + | chr2_1:15817711-15817730 | None:intergenic | 40.0% | |
| GGTTGAAGACGACGTAATTA+GGG | + | chr2_1:15817719-15817738 | None:intergenic | 40.0% | |
| AGGTTGAAGACGACGTAATT+AGG | + | chr2_1:15817720-15817739 | None:intergenic | 40.0% | |
| AGTGAAGGTGAAGGGAATGA+TGG | + | chr2_1:15813468-15813487 | None:intergenic | 45.0% | |
| GGTGTAGAAAGTGAAGGTGA+AGG | + | chr2_1:15813477-15813496 | None:intergenic | 45.0% | |
| ! | TAAGGGTATGTACCAGTTGG+TGG | + | chr2_1:15813540-15813559 | None:intergenic | 45.0% |
| GGGTGATGTTGAAGGATAAG+AGG | + | chr2_1:15813597-15813616 | None:intergenic | 45.0% | |
| GCATTTGAGGGTGATGTTGA+AGG | + | chr2_1:15813605-15813624 | None:intergenic | 45.0% | |
| ! | TTTGAGGCGCATGCATTTGA+GGG | + | chr2_1:15813617-15813636 | None:intergenic | 45.0% |
| GTGGTTGGATTTGGAGATGA+AGG | + | chr2_1:15813663-15813682 | None:intergenic | 45.0% | |
| TACCTCTGGTGCAAGGTTAA+TGG | - | chr2_1:15813683-15813702 | Msa0197630:intron | 45.0% | |
| CTGAGTGCTAAGGTTCCAAA+GGG | - | chr2_1:15813831-15813850 | Msa0197630:intron | 45.0% | |
| CCTTTCAAATGCCTACCCTT+TGG | + | chr2_1:15813849-15813868 | None:intergenic | 45.0% | |
| CCAAAGGGTAGGCATTTGAA+AGG | - | chr2_1:15813846-15813865 | Msa0197630:intron | 45.0% | |
| TTTGCTTCGAGGTCATACTC+AGG | - | chr2_1:15814067-15814086 | Msa0197630:intron | 45.0% | |
| CTTCATGGTCATATTCGGGT+GGG | - | chr2_1:15814194-15814213 | Msa0197630:intron | 45.0% | |
| ! | TTGCATGGTTTTCTCCTGGT+TGG | - | chr2_1:15814408-15814427 | Msa0197630:intron | 45.0% |
| GTTGCCATGAGACGTGAAAA+AGG | - | chr2_1:15814720-15814739 | Msa0197630:CDS | 45.0% | |
| ! | ATTCACAGTGCTAGCACTGA+TGG | - | chr2_1:15815245-15815264 | Msa0197630:CDS | 45.0% |
| !! | TTCACAGTGCTAGCACTGAT+GGG | - | chr2_1:15815246-15815265 | Msa0197630:CDS | 45.0% |
| CTCCTAGTATTTGAATGGCC+AGG | + | chr2_1:15815342-15815361 | None:intergenic | 45.0% | |
| GACACCATGAAAGCTGGAAA+AGG | - | chr2_1:15815552-15815571 | Msa0197630:intron | 45.0% | |
| ! | AGGTGAAACCTTTTCTGCAG+AGG | - | chr2_1:15815572-15815591 | Msa0197630:intron | 45.0% |
| CCATTGGCACATTGACAACT+CGG | + | chr2_1:15815670-15815689 | None:intergenic | 45.0% | |
| TTAGCTTCAGCATCAGCAGA+TGG | - | chr2_1:15815702-15815721 | Msa0197630:intron | 45.0% | |
| GTGACAAGAACGATGTGATC+CGG | + | chr2_1:15816022-15816041 | None:intergenic | 45.0% | |
| TCACATCGTTCTTGTCACAG+CGG | - | chr2_1:15816024-15816043 | Msa0197630:intron | 45.0% | |
| ACTATAGGGGCCACTAAATC+AGG | - | chr2_1:15816144-15816163 | Msa0197630:intron | 45.0% | |
| TAACCAACCTTCCTCGTAAC+CGG | + | chr2_1:15816188-15816207 | None:intergenic | 45.0% | |
| ! | ATCCATGACTCGGAATCACT+AGG | + | chr2_1:15816214-15816233 | None:intergenic | 45.0% |
| AAAGAATGCTTCCTCAGGGT+TGG | + | chr2_1:15816275-15816294 | None:intergenic | 45.0% | |
| ATACGAGTGGCAGTTGGATT+GGG | + | chr2_1:15816388-15816407 | None:intergenic | 45.0% | |
| TAATCCATACGAGTGGCAGT+TGG | + | chr2_1:15816394-15816413 | None:intergenic | 45.0% | |
| ACTAGTGATGGTTTACCGGA+TGG | - | chr2_1:15816460-15816479 | Msa0197630:intron | 45.0% | |
| AGTTCAACGTTGTCTAGTGG+CGG | + | chr2_1:15816565-15816584 | None:intergenic | 45.0% | |
| CTTTCAGAAGAGCTCACTTG+TGG | + | chr2_1:15816655-15816674 | None:intergenic | 45.0% | |
| TTGCGAGACAATCTTGGACT+CGG | + | chr2_1:15816811-15816830 | None:intergenic | 45.0% | |
| !! | TGGCTCATTTTTGTGATCGC+TGG | + | chr2_1:15816887-15816906 | None:intergenic | 45.0% |
| ACAGAGGGATCAAGATTTGC+TGG | + | chr2_1:15816907-15816926 | None:intergenic | 45.0% | |
| TCTGGCTGATGTGCTTGTAT+CGG | - | chr2_1:15816957-15816976 | Msa0197630:intron | 45.0% | |
| GACGACGTAATTAGGGTAAG+AGG | + | chr2_1:15817712-15817731 | None:intergenic | 45.0% | |
| !! | TGTGGTTTTGCAAGACAAGC+CGG | + | chr2_1:15817762-15817781 | None:intergenic | 45.0% |
| !!! | AAATATTTATATGATATTTT+TGG | + | chr2_1:15817837-15817856 | None:intergenic | 5.0% |
| GTGGGATAAGAAGAAGGAGG+GGG | + | chr2_1:15813498-15813517 | None:intergenic | 50.0% | |
| GGTGGGATAAGAAGAAGGAG+GGG | + | chr2_1:15813499-15813518 | None:intergenic | 50.0% | |
| GGGTGGGATAAGAAGAAGGA+GGG | + | chr2_1:15813500-15813519 | None:intergenic | 50.0% | |
| TGGAGGGTAAGAAGAAGAGG+GGG | + | chr2_1:15813520-15813539 | None:intergenic | 50.0% | |
| GTGGAGGGTAAGAAGAAGAG+GGG | + | chr2_1:15813521-15813540 | None:intergenic | 50.0% | |
| GGTGGAGGGTAAGAAGAAGA+GGG | + | chr2_1:15813522-15813541 | None:intergenic | 50.0% | |
| TGGTGGAGGGTAAGAAGAAG+AGG | + | chr2_1:15813523-15813542 | None:intergenic | 50.0% | |
| TCTTCTTACCCTCCACCAAC+TGG | - | chr2_1:15813525-15813544 | Msa0197630:intron | 50.0% | |
| !! | GGTATGTACCAGTTGGTGGA+GGG | + | chr2_1:15813536-15813555 | None:intergenic | 50.0% |
| ! | GTTTGAGGCGCATGCATTTG+AGG | + | chr2_1:15813618-15813637 | None:intergenic | 50.0% |
| ! | CCAGAGGTAGTGGTTGGATT+TGG | + | chr2_1:15813672-15813691 | None:intergenic | 50.0% |
| CCAAATCCAACCACTACCTC+TGG | - | chr2_1:15813669-15813688 | Msa0197630:intron | 50.0% | |
| TAACCTTGCACCAGAGGTAG+TGG | + | chr2_1:15813682-15813701 | None:intergenic | 50.0% | |
| AGCCATTAACCTTGCACCAG+AGG | + | chr2_1:15813688-15813707 | None:intergenic | 50.0% | |
| !! | TTCGGTGTCAGCAAATCCTG+TGG | - | chr2_1:15813749-15813768 | Msa0197630:intron | 50.0% |
| GCAAATCCTGTGGTGAGTTC+AGG | - | chr2_1:15813759-15813778 | Msa0197630:intron | 50.0% | |
| GAAGAACCTGAACTCACCAC+AGG | + | chr2_1:15813768-15813787 | None:intergenic | 50.0% | |
| !! | ATCCTTGCAGGTGTTGACTG+AGG | + | chr2_1:15813810-15813829 | None:intergenic | 50.0% |
| TTAGCACTCAGCATCCTTGC+AGG | + | chr2_1:15813822-15813841 | None:intergenic | 50.0% | |
| TGCAAGGATGCTGAGTGCTA+AGG | - | chr2_1:15813821-15813840 | Msa0197630:intron | 50.0% | |
| GCTGAGTGCTAAGGTTCCAA+AGG | - | chr2_1:15813830-15813849 | Msa0197630:intron | 50.0% | |
| GTGCTAAGGTTCCAAAGGGT+AGG | - | chr2_1:15813835-15813854 | Msa0197630:intron | 50.0% | |
| !! | TCTGATCCTGGTCTTGTGCT+TGG | - | chr2_1:15813954-15813973 | Msa0197630:intron | 50.0% |
| !! | CTGATCCTGGTCTTGTGCTT+GGG | - | chr2_1:15813955-15813974 | Msa0197630:intron | 50.0% |
| GCTTCATGGTCATATTCGGG+TGG | - | chr2_1:15814193-15814212 | Msa0197630:intron | 50.0% | |
| !! | CGTGCCTTTTTCACGTCTCA+TGG | + | chr2_1:15814727-15814746 | None:intergenic | 50.0% |
| CACAAAATTGGAGGGGGGTA+TGG | + | chr2_1:15815073-15815092 | None:intergenic | 50.0% | |
| ! | CATACCCCCCTCCAATTTTG+TGG | - | chr2_1:15815071-15815090 | Msa0197630:CDS | 50.0% |
| AGACATGGCTTTCTTCGCTG+AGG | - | chr2_1:15815121-15815140 | Msa0197630:CDS | 50.0% | |
| AGGATGTTCACCTGTTAGCC+AGG | - | chr2_1:15815141-15815160 | Msa0197630:CDS | 50.0% | |
| !! | TCACAGTGCTAGCACTGATG+GGG | - | chr2_1:15815247-15815266 | Msa0197630:CDS | 50.0% |
| AATCAATGAGGGCCCTGATG+AGG | - | chr2_1:15815285-15815304 | Msa0197630:CDS | 50.0% | |
| GAGGCTTGTCTTCCTCATCA+GGG | + | chr2_1:15815300-15815319 | None:intergenic | 50.0% | |
| TGAGGCTTGTCTTCCTCATC+AGG | + | chr2_1:15815301-15815320 | None:intergenic | 50.0% | |
| ATTGACGGGGTGCACCTTAT+TGG | - | chr2_1:15815624-15815643 | Msa0197630:intron | 50.0% | |
| CCGAGTTGTCAATGTGCCAA+TGG | - | chr2_1:15815667-15815686 | Msa0197630:intron | 50.0% | |
| TTCAGCATCAGCAGATGGCA+CGG | - | chr2_1:15815707-15815726 | Msa0197630:intron | 50.0% | |
| CAAGAACGATGTGATCCGGA+CGG | + | chr2_1:15816018-15816037 | None:intergenic | 50.0% | |
| GATATGGGTATCCGGTTACG+AGG | - | chr2_1:15816174-15816193 | Msa0197630:intron | 50.0% | |
| TATCCGGTTACGAGGAAGGT+TGG | - | chr2_1:15816182-15816201 | Msa0197630:intron | 50.0% | |
| TGCCTAGTGATTCCGAGTCA+TGG | - | chr2_1:15816209-15816228 | Msa0197630:intron | 50.0% | |
| !! | TTCTTCTGAAGCCAACCCTG+AGG | - | chr2_1:15816261-15816280 | Msa0197630:intron | 50.0% |
| CATACGAGTGGCAGTTGGAT+TGG | + | chr2_1:15816389-15816408 | None:intergenic | 50.0% | |
| CAATCCAACTGCCACTCGTA+TGG | - | chr2_1:15816387-15816406 | Msa0197630:intron | 50.0% | |
| TGCACAAGATGGTCTCCATC+CGG | + | chr2_1:15816478-15816497 | None:intergenic | 50.0% | |
| AACCGAGTGTATCTCGTGCT+TGG | - | chr2_1:15816596-15816615 | Msa0197630:intron | 50.0% | |
| ACCGAGTGTATCTCGTGCTT+GGG | - | chr2_1:15816597-15816616 | Msa0197630:intron | 50.0% | |
| TCCCAAGCACGAGATACACT+CGG | + | chr2_1:15816601-15816620 | None:intergenic | 50.0% | |
| AGTGTATCTCGTGCTTGGGA+TGG | - | chr2_1:15816601-15816620 | Msa0197630:intron | 50.0% | |
| TTGGGATGGATCTGCTGATC+TGG | - | chr2_1:15816615-15816634 | Msa0197630:intron | 50.0% | |
| ATCTTGGACTCGGAGGATGT+GGG | + | chr2_1:15816801-15816820 | None:intergenic | 50.0% | |
| AATCTTGGACTCGGAGGATG+TGG | + | chr2_1:15816802-15816821 | None:intergenic | 50.0% | |
| CTGGCTGATGTGCTTGTATC+GGG | - | chr2_1:15816958-15816977 | Msa0197630:intron | 50.0% | |
| CGTCGTCTTCAACCTTTACC+CGG | - | chr2_1:15817725-15817744 | Msa0197630:CDS | 50.0% | |
| GTCGTCTTCAACCTTTACCC+GGG | - | chr2_1:15817726-15817745 | Msa0197630:CDS | 50.0% | |
| TCTTCAACCTTTACCCGGGT+CGG | - | chr2_1:15817730-15817749 | Msa0197630:CDS | 50.0% | |
| !! | GTGGTTTTGCAAGACAAGCC+GGG | + | chr2_1:15817761-15817780 | None:intergenic | 50.0% |
| ! | GGAGGGGGTGTAGAAAGTGA+AGG | + | chr2_1:15813483-15813502 | None:intergenic | 55.0% |
| GGGGTGGGATAAGAAGAAGG+AGG | + | chr2_1:15813501-15813520 | None:intergenic | 55.0% | |
| GAGGGGGTGGGATAAGAAGA+AGG | + | chr2_1:15813504-15813523 | None:intergenic | 55.0% | |
| GGGTAAGAAGAAGAGGGGGT+GGG | + | chr2_1:15813516-15813535 | None:intergenic | 55.0% | |
| AGGGTAAGAAGAAGAGGGGG+TGG | + | chr2_1:15813517-15813536 | None:intergenic | 55.0% | |
| !! | GGGTATGTACCAGTTGGTGG+AGG | + | chr2_1:15813537-15813556 | None:intergenic | 55.0% |
| ! | CTTGCACCAGAGGTAGTGGT+TGG | + | chr2_1:15813678-15813697 | None:intergenic | 55.0% |
| CAACCACTACCTCTGGTGCA+AGG | - | chr2_1:15813676-15813695 | Msa0197630:intron | 55.0% | |
| GTCCTCAGTCAACACCTGCA+AGG | - | chr2_1:15813805-15813824 | Msa0197630:intron | 55.0% | |
| TGTCTCCCAAGCACAAGACC+AGG | + | chr2_1:15813963-15813982 | None:intergenic | 55.0% | |
| !!! | CGGGTGGGATGTGTTGCTTT+TGG | - | chr2_1:15814209-15814228 | Msa0197630:intron | 55.0% |
| CAGTTCATCCGCGAGTATGC+TGG | - | chr2_1:15815371-15815390 | Msa0197630:intron | 55.0% | |
| TGAGGATGCCAGCATACTCG+CGG | + | chr2_1:15815382-15815401 | None:intergenic | 55.0% | |
| GAGAGGCTCCTCTGCAGAAA+AGG | + | chr2_1:15815583-15815602 | None:intergenic | 55.0% | |
| CAGATGGCACGGTCTGCATT+TGG | - | chr2_1:15815718-15815737 | Msa0197630:intron | 55.0% | |
| TGGGTATCCGGTTACGAGGA+AGG | - | chr2_1:15816178-15816197 | Msa0197630:intron | 55.0% | |
| AGCAGAACCAAACCAGCACG+AGG | + | chr2_1:15816316-15816335 | None:intergenic | 55.0% | |
| TCAACGTTGTCTAGTGGCGG+AGG | + | chr2_1:15816562-15816581 | None:intergenic | 55.0% | |
| TCTTGGACTCGGAGGATGTG+GGG | + | chr2_1:15816800-15816819 | None:intergenic | 55.0% | |
| CGAGACAATCTTGGACTCGG+AGG | + | chr2_1:15816808-15816827 | None:intergenic | 55.0% | |
| GGTTTAACCGACCCGGGTAA+AGG | + | chr2_1:15817740-15817759 | None:intergenic | 55.0% | |
| TTACCCGGGTCGGTTAAACC+CGG | - | chr2_1:15817740-15817759 | Msa0197630:CDS | 55.0% | |
| AGCTGAGGCTGCATTTCCCC+TGG | + | chr2_1:15813906-15813925 | None:intergenic | 60.0% | |
| CTTGACTGCTCCACACCGTC+CGG | - | chr2_1:15816000-15816019 | Msa0197630:intron | 60.0% | |
| ACGATGTGATCCGGACGGTG+TGG | + | chr2_1:15816013-15816032 | None:intergenic | 60.0% | |
| GTTGTAGCGTTGCCTCGTGC+TGG | - | chr2_1:15816301-15816320 | Msa0197630:intron | 60.0% | |
| !! | AGCGTTGCCTCGTGCTGGTT+TGG | - | chr2_1:15816306-15816325 | Msa0197630:intron | 60.0% |
| CTTGGACTCGGAGGATGTGG+GGG | + | chr2_1:15816799-15816818 | None:intergenic | 60.0% | |
| AAGCCGGGTTTAACCGACCC+GGG | + | chr2_1:15817746-15817765 | None:intergenic | 60.0% | |
| CAAGCCGGGTTTAACCGACC+CGG | + | chr2_1:15817747-15817766 | None:intergenic | 60.0% | |
| ATCGCTGGCGCTAGCTGAGC+TGG | + | chr2_1:15816872-15816891 | None:intergenic | 65.0% | |
| GATGTGGGGGTGGAGCAGCG+TGG | + | chr2_1:15816786-15816805 | None:intergenic | 70.0% | |
| GGACTCGGAGGATGTGGGGG+TGG | + | chr2_1:15816796-15816815 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 15813351 | 15818115 | 15813351 | ID=Msa0197630;Name=Msa0197630 |
| chr2_1 | mRNA | 15813351 | 15818115 | 15813351 | ID=Msa0197630-mRNA-1;Parent=Msa0197630;Name=Msa0197630-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.5|0.4|0.8|1|1|5|0|653 |
| chr2_1 | exon | 15817327 | 15818115 | 15817327 | ID=Msa0197630-mRNA-1:exon:6629;Parent=Msa0197630-mRNA-1 |
| chr2_1 | exon | 15815738 | 15815956 | 15815738 | ID=Msa0197630-mRNA-1:exon:6628;Parent=Msa0197630-mRNA-1 |
| chr2_1 | exon | 15815421 | 15815549 | 15815421 | ID=Msa0197630-mRNA-1:exon:6627;Parent=Msa0197630-mRNA-1 |
| chr2_1 | exon | 15814494 | 15815315 | 15814494 | ID=Msa0197630-mRNA-1:exon:6626;Parent=Msa0197630-mRNA-1 |
| chr2_1 | exon | 15813351 | 15813353 | 15813351 | ID=Msa0197630-mRNA-1:exon:6625;Parent=Msa0197630-mRNA-1 |
| chr2_1 | CDS | 15817327 | 15818115 | 15817327 | ID=Msa0197630-mRNA-1:cds;Parent=Msa0197630-mRNA-1 |
| chr2_1 | CDS | 15815738 | 15815956 | 15815738 | ID=Msa0197630-mRNA-1:cds;Parent=Msa0197630-mRNA-1 |
| chr2_1 | CDS | 15815421 | 15815549 | 15815421 | ID=Msa0197630-mRNA-1:cds;Parent=Msa0197630-mRNA-1 |
| chr2_1 | CDS | 15814494 | 15815315 | 15814494 | ID=Msa0197630-mRNA-1:cds;Parent=Msa0197630-mRNA-1 |
| chr2_1 | CDS | 15813351 | 15813353 | 15813351 | ID=Msa0197630-mRNA-1:cds;Parent=Msa0197630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
