Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300950 | A0A396IEG2 | 97.421 | 504 | 13 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1012 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042330 | Msa1300950 | 0.808055 | 3.737492e-50 | -8.615850e-47 |
| Msa0707000 | Msa1300950 | 0.839190 | 1.837619e-57 | -8.615850e-47 |
| Msa0183640 | Msa1300950 | 0.818014 | 2.445416e-52 | -8.615850e-47 |
| Msa0197630 | Msa1300950 | 0.810871 | 9.291062e-51 | -8.615850e-47 |
| Msa0216580 | Msa1300950 | 0.833709 | 4.564060e-56 | -8.615850e-47 |
| Msa1256070 | Msa1300950 | 0.814067 | 1.860921e-51 | -8.615850e-47 |
| Msa1279490 | Msa1300950 | 0.887678 | 1.155589e-72 | -8.615850e-47 |
| Msa1296250 | Msa1300950 | 0.849002 | 4.274556e-60 | -8.615850e-47 |
| Msa1300950 | Msa1331970 | 0.853539 | 2.235207e-61 | -8.615850e-47 |
| Msa1300950 | Msa1381100 | 0.868411 | 6.663258e-66 | -8.615850e-47 |
| Msa1300950 | Msa1404220 | 0.856691 | 2.710178e-62 | -8.615850e-47 |
| Msa1300950 | Msa1424560 | 0.833082 | 6.542528e-56 | -8.615850e-47 |
| Msa1300950 | Msa1442160 | 0.808318 | 3.284739e-50 | -8.615850e-47 |
| Msa0378410 | Msa1300950 | 0.868037 | 8.793938e-66 | -8.615850e-47 |
| Msa0472780 | Msa1300950 | 0.818820 | 1.605909e-52 | -8.615850e-47 |
| Msa1040110 | Msa1300950 | 0.856031 | 4.232852e-62 | -8.615850e-47 |
| Msa1083420 | Msa1300950 | 0.859475 | 4.032019e-63 | -8.615850e-47 |
| Msa0247970 | Msa1300950 | 0.800929 | 1.144240e-48 | -8.615850e-47 |
| Msa0269800 | Msa1300950 | 0.817492 | 3.206352e-52 | -8.615850e-47 |
| Msa0328420 | Msa1300950 | 0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa1123290 | Msa1300950 | 0.825645 | 4.187943e-54 | -8.615850e-47 |
| Msa1123310 | Msa1300950 | 0.827095 | 1.889819e-54 | -8.615850e-47 |
| Msa1128170 | Msa1300950 | 0.844385 | 7.812575e-59 | -8.615850e-47 |
| Msa1154680 | Msa1300950 | 0.831854 | 1.318453e-55 | -8.615850e-47 |
| Msa1165370 | Msa1300950 | 0.833136 | 6.342600e-56 | -8.615850e-47 |
| Msa1215020 | Msa1300950 | 0.919571 | 3.811368e-87 | -8.615850e-47 |
| Msa0539010 | Msa1300950 | 0.809347 | 1.978996e-50 | -8.615850e-47 |
| Msa0573100 | Msa1300950 | 0.837494 | 5.030302e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300950 | MtrunA17_Chr4g0064061 | 97.421 | 504 | 13 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1012 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300950 | AT3G33530.5 | 56.098 | 492 | 193 | 8 | 23 | 504 | 3 | 481 | 1.50e-166 | 504 |
| Msa1300950 | AT3G33530.4 | 56.098 | 492 | 193 | 8 | 23 | 504 | 3 | 481 | 5.08e-166 | 505 |
| Msa1300950 | AT3G33530.1 | 55.242 | 496 | 201 | 7 | 23 | 510 | 3 | 485 | 8.04e-166 | 505 |
| Msa1300950 | AT3G33530.2 | 58.864 | 440 | 169 | 4 | 23 | 455 | 3 | 437 | 2.28e-164 | 501 |
| Msa1300950 | AT3G33530.3 | 58.864 | 440 | 169 | 4 | 23 | 455 | 3 | 437 | 5.02e-164 | 501 |
| Msa1300950 | AT2G26610.1 | 53.828 | 418 | 169 | 6 | 33 | 435 | 6 | 414 | 1.13e-144 | 447 |
Find 160 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAACTGATTCGAAATT+AGG | 0.160485 | 8_3:+62728614 | Msa1300950:CDS |
| GATTTGATTTGATTTGATTC+AGG | 0.226104 | 8_3:-62728150 | None:intergenic |
| TATCTGATGATGGGAAAATA+TGG | 0.258973 | 8_3:+62730338 | Msa1300950:CDS |
| TTAATCCTAGCTGCGATTAC+TGG | 0.275252 | 8_3:+62728677 | Msa1300950:CDS |
| TTGAAACTGATTCGAAATTA+GGG | 0.280134 | 8_3:+62728615 | Msa1300950:CDS |
| CACTTACGGTTTCCTCTTCC+AGG | 0.282891 | 8_3:-62729188 | None:intergenic |
| TGATTCGAAATTAGGGATTC+AGG | 0.293094 | 8_3:+62728622 | Msa1300950:CDS |
| AATGTATCTTAGAAATAATC+TGG | 0.301987 | 8_3:-62730306 | None:intergenic |
| CCTTCATCGAAATTTCTTCA+TGG | 0.306350 | 8_3:-62730567 | None:intergenic |
| ATTTGCGCGATAGGTCTTAA+AGG | 0.312043 | 8_3:+62728812 | Msa1300950:CDS |
| AATAATTCTTGCCAATGTTC+TGG | 0.316996 | 8_3:-62730216 | None:intergenic |
| CTCATGAAGGTAAGGAGAAC+TGG | 0.332505 | 8_3:-62730248 | None:intergenic |
| TGGTGGAGGGATGGGGAAAG+TGG | 0.340095 | 8_3:-62728423 | None:intergenic |
| CCGGCGGAGGACGGTGGTGG+AGG | 0.341096 | 8_3:-62728437 | None:intergenic |
| CTGCACTCACAAACTTGCTT+TGG | 0.343307 | 8_3:+62730595 | Msa1300950:CDS |
| GATTCAGGGTTAGTGTTTAG+TGG | 0.357365 | 8_3:-62728135 | None:intergenic |
| GGTTTGCATTCTCTCAGCTT+TGG | 0.361075 | 8_3:+62728993 | Msa1300950:CDS |
| GGGAATGCGAGGAGGCCGTT+GGG | 0.372644 | 8_3:-62728350 | None:intergenic |
| AGGACGGTGGTGGAGGGATG+GGG | 0.379222 | 8_3:-62728430 | None:intergenic |
| AACACTATGGTATCTATTGC+TGG | 0.382376 | 8_3:+62730466 | Msa1300950:CDS |
| TAGGCGGCTTCTATTATCAT+TGG | 0.389552 | 8_3:-62730527 | None:intergenic |
| TCTACGCTTTCTCTGTTTAA+CGG | 0.392906 | 8_3:+62728704 | Msa1300950:CDS |
| GTTCTACTGGACGATGTGTT+TGG | 0.393788 | 8_3:+62728726 | Msa1300950:CDS |
| GAGGACGGTGGTGGAGGGAT+GGG | 0.399454 | 8_3:-62728431 | None:intergenic |
| ATTTGATTTGATTTGATTCA+GGG | 0.399977 | 8_3:-62728149 | None:intergenic |
| GGTCCGGCGGAGGACGGTGG+TGG | 0.407620 | 8_3:-62728440 | None:intergenic |
| TCGTACCGATTCGACTGAAT+TGG | 0.419294 | 8_3:+62728901 | Msa1300950:CDS |
| GGCCTCCTCGCATTCCCTTC+CGG | 0.419361 | 8_3:+62728356 | Msa1300950:CDS |
| ATCTACTGTGCTCATGTTGA+TGG | 0.421400 | 8_3:+62729154 | Msa1300950:CDS |
| GGTGATGAAGATGATGAAAA+TGG | 0.423103 | 8_3:-62728257 | None:intergenic |
| CTTCATCACCACAAGAATCA+TGG | 0.435292 | 8_3:+62728270 | Msa1300950:CDS |
| AGATACCATAGTGTTAGAAT+TGG | 0.437666 | 8_3:-62730458 | None:intergenic |
| CATCGAAATTTCTTCATGGT+TGG | 0.438055 | 8_3:-62730563 | None:intergenic |
| GGTAAAATCTCTTTCAAGCT+TGG | 0.442222 | 8_3:-62728924 | None:intergenic |
| TGAGGAAAGTGTTGTTATCA+AGG | 0.442346 | 8_3:+62728868 | Msa1300950:CDS |
| GATTGCACAGTAGCATTAGA+TGG | 0.446634 | 8_3:+62730433 | Msa1300950:CDS |
| TTGATCTCCATATCTGATGA+TGG | 0.448006 | 8_3:+62730328 | Msa1300950:CDS |
| CAGTAGATCCACTCGTTAGT+AGG | 0.450037 | 8_3:-62729139 | None:intergenic |
| GGAGGACGGTGGTGGAGGGA+TGG | 0.450636 | 8_3:-62728432 | None:intergenic |
| TGGAGCCAATTCTAACACTA+TGG | 0.460082 | 8_3:+62730453 | Msa1300950:CDS |
| AGGCGGCTTCTATTATCATT+GGG | 0.461789 | 8_3:-62730526 | None:intergenic |
| CCGAAGTTGTTGCGAGTTGA+GGG | 0.466342 | 8_3:-62728311 | None:intergenic |
| TCAAAAGGATGATAAGAAGC+TGG | 0.466639 | 8_3:+62730396 | Msa1300950:CDS |
| TTGCATTCTCTCAGCTTTGG+AGG | 0.469320 | 8_3:+62728996 | Msa1300950:CDS |
| ATCCACTCGTTAGTAGGATC+AGG | 0.470357 | 8_3:-62729133 | None:intergenic |
| TCTCTGTTTAACGGTTCTAC+TGG | 0.470504 | 8_3:+62728713 | Msa1300950:CDS |
| AGGTGGCGATTGAGAGGGAG+AGG | 0.471434 | 8_3:-62728488 | None:intergenic |
| CTGTTATCGTTGCTTCATGT+TGG | 0.472403 | 8_3:+62728839 | Msa1300950:CDS |
| GGTATCTATTGCTGGTGGAC+GGG | 0.473492 | 8_3:+62730474 | Msa1300950:CDS |
| TCCGAAGTTGTTGCGAGTTG+AGG | 0.474623 | 8_3:-62728312 | None:intergenic |
| TAGGGATTCAGGATCTCTGT+TGG | 0.477627 | 8_3:+62728633 | Msa1300950:CDS |
| GCAGCTAGGATTAACAAATC+AGG | 0.479228 | 8_3:-62728668 | None:intergenic |
| GAAAGGAGGTGGCGATTGAG+AGG | 0.481789 | 8_3:-62728494 | None:intergenic |
| AGGGAATGCGAGGAGGCCGT+TGG | 0.484572 | 8_3:-62728351 | None:intergenic |
| GAGGTGAGAGGAGGAAGGCT+CGG | 0.491183 | 8_3:-62728519 | None:intergenic |
| TCGCGACGAATTTGCGCGAT+AGG | 0.492135 | 8_3:+62728803 | Msa1300950:CDS |
| AGGAGGAAGGCTCGGATGAA+AGG | 0.492347 | 8_3:-62728511 | None:intergenic |
| TCTCACCTCCTCCTCGCCGC+CGG | 0.494130 | 8_3:+62728533 | Msa1300950:CDS |
| CGGCGGAGGACGGTGGTGGA+GGG | 0.495839 | 8_3:-62728436 | None:intergenic |
| TGTGGTTGTGATGATGATCT+TGG | 0.501048 | 8_3:-62728230 | None:intergenic |
| TCGTCGTTGCCTCGTGGTTG+TGG | 0.501342 | 8_3:+62729091 | Msa1300950:CDS |
| GGTTGGACGTTGAGCTTGGT+AGG | 0.503109 | 8_3:-62730546 | None:intergenic |
| AGAAGCCGGTGTTGCAGCAC+CGG | 0.503477 | 8_3:-62728945 | None:intergenic |
| TTGTTGCGAGTTGAGGGACC+TGG | 0.504230 | 8_3:-62728305 | None:intergenic |
| GTCTCAAATCCGCGATTCTG+TGG | 0.506465 | 8_3:+62728591 | Msa1300950:CDS |
| CAAATTCGTCGCGAATCAAA+CGG | 0.507891 | 8_3:-62728794 | None:intergenic |
| GACGATGGAGATTGAACTGC+CGG | 0.507984 | 8_3:-62728375 | None:intergenic |
| GACTGGCTCTTGACTGCTGA+AGG | 0.508483 | 8_3:+62730361 | Msa1300950:CDS |
| GATCACCGGCGGCGAGGAGG+AGG | 0.513014 | 8_3:-62728538 | None:intergenic |
| TCAAAATCCTCATGAAGGTA+AGG | 0.514473 | 8_3:-62730256 | None:intergenic |
| GACTCGTCGCAAAAGTCAAA+AGG | 0.514911 | 8_3:-62730283 | None:intergenic |
| ATCTGATGATGGGAAAATAT+GGG | 0.515551 | 8_3:+62730339 | Msa1300950:CDS |
| GGTATCTGATTGGCATAAAA+CGG | 0.519297 | 8_3:-62730188 | None:intergenic |
| TCATGGTTGGACGTTGAGCT+TGG | 0.520462 | 8_3:-62730550 | None:intergenic |
| TGTTACATTTCCGAGGGAGT+TGG | 0.520464 | 8_3:+62729030 | Msa1300950:CDS |
| TGGTATCTATTGCTGGTGGA+CGG | 0.523241 | 8_3:+62730473 | Msa1300950:CDS |
| AGGGAATGCAGACACTCAAA+AGG | 0.523962 | 8_3:+62730381 | Msa1300950:CDS |
| CTTGGCCAATTCAGTCGAAT+CGG | 0.524458 | 8_3:-62728906 | None:intergenic |
| GGCGAGGAGGAGGTGAGAGG+AGG | 0.527947 | 8_3:-62728528 | None:intergenic |
| CCATGAAGAAATTTCGATGA+AGG | 0.528504 | 8_3:+62730567 | Msa1300950:CDS |
| AGGAGGAGGTGAGAGGAGGA+AGG | 0.530200 | 8_3:-62728524 | None:intergenic |
| AATGCGACCTTGACGATCAC+CGG | 0.531317 | 8_3:-62728552 | None:intergenic |
| CCCTCAACTCGCAACAACTT+CGG | 0.533175 | 8_3:+62728311 | Msa1300950:CDS |
| CTTGCCAATGTTCTGGAGAG+TGG | 0.535940 | 8_3:-62730209 | None:intergenic |
| TTAAACAGAGAAAGCGTAGA+AGG | 0.536407 | 8_3:-62728701 | None:intergenic |
| GCCGTTGGGGTTTAGATCTG+AGG | 0.541714 | 8_3:-62728336 | None:intergenic |
| TTATCATTGGGATGCTCCTG+TGG | 0.543793 | 8_3:-62730514 | None:intergenic |
| TTCATCACCACAAGAATCAT+GGG | 0.548550 | 8_3:+62728271 | Msa1300950:CDS |
| CAGTTCTCCTTACCTTCATG+AGG | 0.548717 | 8_3:+62730249 | Msa1300950:CDS |
| GACGGGAACTAAATGTAGGC+AGG | 0.552346 | 8_3:+62730491 | Msa1300950:CDS |
| AACTGTCACATAGAACCAAA+TGG | 0.553291 | 8_3:-62730630 | None:intergenic |
| GGGACAGAGGTGCCAACAGA+TGG | 0.555143 | 8_3:-62730145 | None:intergenic |
| TTGGAAGTACGATGCTTCGC+CGG | 0.556925 | 8_3:+62728745 | Msa1300950:CDS |
| GGCGGCGAGGAGGAGGTGAG+AGG | 0.557363 | 8_3:-62728531 | None:intergenic |
| GGAATGCGAGGAGGCCGTTG+GGG | 0.558189 | 8_3:-62728349 | None:intergenic |
| GATGATGAAAATGGTGATTG+TGG | 0.559434 | 8_3:-62728248 | None:intergenic |
| AGTTACGAACGGTCCGGCGG+AGG | 0.559436 | 8_3:-62728450 | None:intergenic |
| GCAAGCTTAGCACCTGGAAG+AGG | 0.559747 | 8_3:+62729176 | Msa1300950:CDS |
| TGATCTCCATATCTGATGAT+GGG | 0.561439 | 8_3:+62730329 | Msa1300950:CDS |
| AGAGGAAAAGCTGCAGAAGC+CGG | 0.561440 | 8_3:-62728959 | None:intergenic |
| GCAAACCTAGCTACATGAAG+AGG | 0.561471 | 8_3:-62728977 | None:intergenic |
| AAAGGAGGTGGCGATTGAGA+GGG | 0.564845 | 8_3:-62728493 | None:intergenic |
| CCTCCACCACCGTCCTCCGC+CGG | 0.566437 | 8_3:+62728437 | Msa1300950:CDS |
| CAAAAGGATGATAAGAAGCT+GGG | 0.571281 | 8_3:+62730397 | Msa1300950:CDS |
| ATGTATCTTAGAAATAATCT+GGG | 0.572225 | 8_3:-62730305 | None:intergenic |
| ACTAAATGTAGGCAGGCCAC+AGG | 0.572382 | 8_3:+62730498 | Msa1300950:CDS |
| TGGAGATTGAACTGCCGGAA+GGG | 0.574798 | 8_3:-62728370 | None:intergenic |
| GGTGGCGATTGAGAGGGAGA+GGG | 0.578790 | 8_3:-62728487 | None:intergenic |
| GATTGTCAAAATCCTCATGA+AGG | 0.579191 | 8_3:-62730261 | None:intergenic |
| CTCGCCGCCGGTGATCGTCA+AGG | 0.579738 | 8_3:+62728545 | Msa1300950:CDS |
| AACGGTCCGGCGGAGGACGG+TGG | 0.582624 | 8_3:-62728443 | None:intergenic |
| ATGATGGGAAAATATGGGAC+TGG | 0.586681 | 8_3:+62730344 | Msa1300950:CDS |
| TCACATAGAACCAAATGGTG+GGG | 0.587174 | 8_3:-62730625 | None:intergenic |
| CAATCTCCATCGTCGACACA+CGG | 0.588368 | 8_3:+62728384 | Msa1300950:CDS |
| AACGGAAGTTACGAACGGTC+CGG | 0.591997 | 8_3:-62728456 | None:intergenic |
| GGTGGACGGGAACTAAATGT+AGG | 0.597165 | 8_3:+62730487 | Msa1300950:CDS |
| TCTGGAGAGTGGTATCTGAT+TGG | 0.597286 | 8_3:-62730198 | None:intergenic |
| TCAAACACAACCAACTCCCT+CGG | 0.597805 | 8_3:-62729040 | None:intergenic |
| AAGGCTCGGATGAAAGGAGG+TGG | 0.597880 | 8_3:-62728505 | None:intergenic |
| AGGAAGGCTCGGATGAAAGG+AGG | 0.600021 | 8_3:-62728508 | None:intergenic |
| GTCACATAGAACCAAATGGT+GGG | 0.600148 | 8_3:-62730626 | None:intergenic |
| CGGAAAGTATCGAAGGAGAA+GGG | 0.604397 | 8_3:-62730165 | None:intergenic |
| GACGATCACCGGCGGCGAGG+AGG | 0.604512 | 8_3:-62728541 | None:intergenic |
| AAGGTCCAGTAATCGCAGCT+AGG | 0.607613 | 8_3:-62728682 | None:intergenic |
| AGGGAGAGGGATCCAGCGAA+CGG | 0.607863 | 8_3:-62728474 | None:intergenic |
| ATTGATTCCCATGATTCTTG+TGG | 0.608005 | 8_3:-62728278 | None:intergenic |
| TGTTGCGAGTTGAGGGACCT+GGG | 0.608063 | 8_3:-62728304 | None:intergenic |
| AGTACACACTATGTATTCGA+TGG | 0.609162 | 8_3:+62730111 | Msa1300950:CDS |
| GCGGAAAGTATCGAAGGAGA+AGG | 0.610917 | 8_3:-62730166 | None:intergenic |
| CACATAGAACCAAATGGTGG+GGG | 0.611069 | 8_3:-62730624 | None:intergenic |
| TCATGGGAATCAATGCTCCC+AGG | 0.611399 | 8_3:+62728287 | Msa1300950:CDS |
| ATGGAGATTGAACTGCCGGA+AGG | 0.613476 | 8_3:-62728371 | None:intergenic |
| TTGATGGCAAGCTTAGCACC+TGG | 0.615368 | 8_3:+62729170 | Msa1300950:CDS |
| ACTGGCTCTTGACTGCTGAA+GGG | 0.616680 | 8_3:+62730362 | Msa1300950:CDS |
| GCTTCATGTTGGTGATTCTG+AGG | 0.616903 | 8_3:+62728850 | Msa1300950:CDS |
| AACTGCCGGAAGGGAATGCG+AGG | 0.618009 | 8_3:-62728361 | None:intergenic |
| TTTGTTTGTTACATTTCCGA+GGG | 0.620703 | 8_3:+62729024 | Msa1300950:CDS |
| TCATGAAGGTAAGGAGAACT+GGG | 0.620997 | 8_3:-62730247 | None:intergenic |
| ACGAACGGTCCGGCGGAGGA+CGG | 0.622280 | 8_3:-62728446 | None:intergenic |
| GATGATCTTGGTGATGCTCG+TGG | 0.626094 | 8_3:-62728218 | None:intergenic |
| AAAACGGCGGAAAGTATCGA+AGG | 0.629671 | 8_3:-62730172 | None:intergenic |
| GAAGAGTTGATGCCATCTGT+TGG | 0.630445 | 8_3:+62730133 | Msa1300950:CDS |
| GATACCACTCTCCAGAACAT+TGG | 0.631170 | 8_3:+62730205 | Msa1300950:CDS |
| TATCGAAGGAGAAGGGACAG+AGG | 0.638528 | 8_3:-62730158 | None:intergenic |
| ACTATGGTATCTATTGCTGG+TGG | 0.639187 | 8_3:+62730469 | Msa1300950:CDS |
| TGCCTGATCCTACTAACGAG+TGG | 0.643830 | 8_3:+62729131 | Msa1300950:CDS |
| TGGACGTTGAGCTTGGTAGG+CGG | 0.645391 | 8_3:-62730543 | None:intergenic |
| TGCCGGAAGGGAATGCGAGG+AGG | 0.645896 | 8_3:-62728358 | None:intergenic |
| AGTTTCAAACCACAGAATCG+CGG | 0.649988 | 8_3:-62728600 | None:intergenic |
| ATCTCTGTTGGATTCAAGCG+CGG | 0.650701 | 8_3:+62728645 | Msa1300950:CDS |
| CGAATACACGAGAAATACTC+CGG | 0.652238 | 8_3:-62728764 | None:intergenic |
| GCGACCTTGACGATCACCGG+CGG | 0.652741 | 8_3:-62728549 | None:intergenic |
| CTTGACGATCACCGGCGGCG+AGG | 0.653914 | 8_3:-62728544 | None:intergenic |
| TTTGCGTCGTCGTTGCCTCG+TGG | 0.657204 | 8_3:+62729085 | Msa1300950:CDS |
| GGAAGTTACGAACGGTCCGG+CGG | 0.658031 | 8_3:-62728453 | None:intergenic |
| CATTGACCGTGTGTCGACGA+TGG | 0.660637 | 8_3:-62728390 | None:intergenic |
| ATCTGATTGGCATAAAACGG+CGG | 0.669593 | 8_3:-62730185 | None:intergenic |
| TCCTCAGATCTAAACCCCAA+CGG | 0.670465 | 8_3:+62728335 | Msa1300950:CDS |
| TGTCACATAGAACCAAATGG+TGG | 0.694602 | 8_3:-62730627 | None:intergenic |
| CAGCGAACGGAAGTTACGAA+CGG | 0.698175 | 8_3:-62728461 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTCTTACATTCATATT+TGG | + | chr8_3:62729224-62729243 | Msa1300950:intron | 15.0% |
| !!! | ATTTTTGTTTGTCAAATTTT+TGG | + | chr8_3:62729436-62729455 | Msa1300950:intron | 15.0% |
| !!! | ATTTGATTTGATTTGATTCA+GGG | - | chr8_3:62728152-62728171 | None:intergenic | 20.0% |
| !! | AAAATCCAAAAAATGTTCTT+AGG | + | chr8_3:62728185-62728204 | Msa1300950:exon | 20.0% |
| !! | ATGACAAGTATAAAAACAAT+AGG | - | chr8_3:62729675-62729694 | None:intergenic | 20.0% |
| !! | GAAATATATGTAGAATATAC+TGG | - | chr8_3:62729963-62729982 | None:intergenic | 20.0% |
| !! | GTATATTCTACATATATTTC+TGG | + | chr8_3:62729963-62729982 | Msa1300950:intron | 20.0% |
| !! | ATGTATCTTAGAAATAATCT+GGG | - | chr8_3:62730308-62730327 | None:intergenic | 20.0% |
| !! | AATGTATCTTAGAAATAATC+TGG | - | chr8_3:62730309-62730328 | None:intergenic | 20.0% |
| !!! | GATTTGATTTGATTTGATTC+AGG | - | chr8_3:62728153-62728172 | None:intergenic | 25.0% |
| !!! | AAGTTCCTAAGAACATTTTT+TGG | - | chr8_3:62728193-62728212 | None:intergenic | 25.0% |
| !!! | TTTGAAACTGATTCGAAATT+AGG | + | chr8_3:62728614-62728633 | Msa1300950:CDS | 25.0% |
| !!! | TTGAAACTGATTCGAAATTA+GGG | + | chr8_3:62728615-62728634 | Msa1300950:CDS | 25.0% |
| ! | ATGTAAGAAAATTCTACGAT+AGG | - | chr8_3:62729217-62729236 | None:intergenic | 25.0% |
| ! | TATATGAAACTATCAATCAC+TGG | - | chr8_3:62729306-62729325 | None:intergenic | 25.0% |
| ! | TTAAATTACTCGTAATATGC+TGG | + | chr8_3:62729354-62729373 | Msa1300950:intron | 25.0% |
| ! | AAGGGAAGATAATTCATATA+AGG | - | chr8_3:62729527-62729546 | None:intergenic | 25.0% |
| ! | CACTTAAAAATTCAGTTCTT+GGG | - | chr8_3:62729553-62729572 | None:intergenic | 25.0% |
| ! | TCACTTAAAAATTCAGTTCT+TGG | - | chr8_3:62729554-62729573 | None:intergenic | 25.0% |
| !!! | AAGAACTGAATTTTTAAGTG+AGG | + | chr8_3:62729553-62729572 | Msa1300950:intron | 25.0% |
| ! | TTTATCCTCTATAACAATCA+AGG | - | chr8_3:62729631-62729650 | None:intergenic | 25.0% |
| ! | AAGCTTGAAAGAGATTTTAC+CGG | + | chr8_3:62728926-62728945 | Msa1300950:CDS | 30.0% |
| !! | TTTTGTTTGTTACATTTCCG+AGG | + | chr8_3:62729023-62729042 | Msa1300950:CDS | 30.0% |
| ! | TTTGTTTGTTACATTTCCGA+GGG | + | chr8_3:62729024-62729043 | Msa1300950:CDS | 30.0% |
| !!! | AACTGAATTTTTAAGTGAGG+TGG | + | chr8_3:62729556-62729575 | Msa1300950:intron | 30.0% |
| ! | TTTGCTCTATAAGTTTTCCA+AGG | + | chr8_3:62729694-62729713 | Msa1300950:intron | 30.0% |
| ! | TTGCTCTATAAGTTTTCCAA+GGG | + | chr8_3:62729695-62729714 | Msa1300950:intron | 30.0% |
| ! | ACTGGATGCATAGATATTTT+GGG | - | chr8_3:62729945-62729964 | None:intergenic | 30.0% |
| ! | TACTGGATGCATAGATATTT+TGG | - | chr8_3:62729946-62729965 | None:intergenic | 30.0% |
| AATAATTCTTGCCAATGTTC+TGG | - | chr8_3:62730219-62730238 | None:intergenic | 30.0% | |
| ! | TATTTTCCCATCATCAGATA+TGG | - | chr8_3:62730338-62730357 | None:intergenic | 30.0% |
| !! | TATCTGATGATGGGAAAATA+TGG | + | chr8_3:62730338-62730357 | Msa1300950:CDS | 30.0% |
| !! | ATCTGATGATGGGAAAATAT+GGG | + | chr8_3:62730339-62730358 | Msa1300950:CDS | 30.0% |
| AGATACCATAGTGTTAGAAT+TGG | - | chr8_3:62730461-62730480 | None:intergenic | 30.0% | |
| GATGATGAAAATGGTGATTG+TGG | - | chr8_3:62728251-62728270 | None:intergenic | 35.0% | |
| GGTGATGAAGATGATGAAAA+TGG | - | chr8_3:62728260-62728279 | None:intergenic | 35.0% | |
| TTCATCACCACAAGAATCAT+GGG | + | chr8_3:62728271-62728290 | Msa1300950:CDS | 35.0% | |
| ! | ATTGATTCCCATGATTCTTG+TGG | - | chr8_3:62728281-62728300 | None:intergenic | 35.0% |
| TGATTCGAAATTAGGGATTC+AGG | + | chr8_3:62728622-62728641 | Msa1300950:CDS | 35.0% | |
| ! | TTAAACAGAGAAAGCGTAGA+AGG | - | chr8_3:62728704-62728723 | None:intergenic | 35.0% |
| TCTACGCTTTCTCTGTTTAA+CGG | + | chr8_3:62728704-62728723 | Msa1300950:CDS | 35.0% | |
| !! | TGAGGAAAGTGTTGTTATCA+AGG | + | chr8_3:62728868-62728887 | Msa1300950:CDS | 35.0% |
| GGTAAAATCTCTTTCAAGCT+TGG | - | chr8_3:62728927-62728946 | None:intergenic | 35.0% | |
| TCTACGATAGGAAACACTTA+CGG | - | chr8_3:62729205-62729224 | None:intergenic | 35.0% | |
| TGCTGGTAGAATATGTTGAT+TGG | + | chr8_3:62729371-62729390 | Msa1300950:intron | 35.0% | |
| GACAAATGATGAATGTTCAG+AGG | + | chr8_3:62729578-62729597 | Msa1300950:intron | 35.0% | |
| AAATGATGAATGTTCAGAGG+AGG | + | chr8_3:62729581-62729600 | Msa1300950:intron | 35.0% | |
| AAATGATGCTGATCTGTATC+AGG | - | chr8_3:62729750-62729769 | None:intergenic | 35.0% | |
| TACTGAAACAGCTCAGAAAA+GGG | - | chr8_3:62729810-62729829 | None:intergenic | 35.0% | |
| TTACTGAAACAGCTCAGAAA+AGG | - | chr8_3:62729811-62729830 | None:intergenic | 35.0% | |
| ! | GCTGTTTCAGTAACCATATT+TGG | + | chr8_3:62729818-62729837 | Msa1300950:intron | 35.0% |
| AGAGCAATGCAAACCAAATA+TGG | - | chr8_3:62729834-62729853 | None:intergenic | 35.0% | |
| ATTTGACCTTTCAAAGCTGT+TGG | + | chr8_3:62729892-62729911 | Msa1300950:intron | 35.0% | |
| TTTGACCTTTCAAAGCTGTT+GGG | + | chr8_3:62729893-62729912 | Msa1300950:intron | 35.0% | |
| CATATACTTATGTACACCCA+TGG | - | chr8_3:62729919-62729938 | None:intergenic | 35.0% | |
| ATTTCAGGAAATGAAGAGAC+TGG | - | chr8_3:62730011-62730030 | None:intergenic | 35.0% | |
| ATCAGCTATACTCTGATTTC+AGG | - | chr8_3:62730026-62730045 | None:intergenic | 35.0% | |
| TTATCTGTATGTGATCACAG+TGG | + | chr8_3:62730082-62730101 | Msa1300950:intron | 35.0% | |
| TATCTGTATGTGATCACAGT+GGG | + | chr8_3:62730083-62730102 | Msa1300950:intron | 35.0% | |
| AGTACACACTATGTATTCGA+TGG | + | chr8_3:62730111-62730130 | Msa1300950:CDS | 35.0% | |
| GGTATCTGATTGGCATAAAA+CGG | - | chr8_3:62730191-62730210 | None:intergenic | 35.0% | |
| TCAAAATCCTCATGAAGGTA+AGG | - | chr8_3:62730259-62730278 | None:intergenic | 35.0% | |
| GATTGTCAAAATCCTCATGA+AGG | - | chr8_3:62730264-62730283 | None:intergenic | 35.0% | |
| TTGATCTCCATATCTGATGA+TGG | + | chr8_3:62730328-62730347 | Msa1300950:CDS | 35.0% | |
| TGATCTCCATATCTGATGAT+GGG | + | chr8_3:62730329-62730348 | Msa1300950:CDS | 35.0% | |
| TCAAAAGGATGATAAGAAGC+TGG | + | chr8_3:62730396-62730415 | Msa1300950:CDS | 35.0% | |
| CAAAAGGATGATAAGAAGCT+GGG | + | chr8_3:62730397-62730416 | Msa1300950:CDS | 35.0% | |
| AACACTATGGTATCTATTGC+TGG | + | chr8_3:62730466-62730485 | Msa1300950:CDS | 35.0% | |
| CATCGAAATTTCTTCATGGT+TGG | - | chr8_3:62730566-62730585 | None:intergenic | 35.0% | |
| CCTTCATCGAAATTTCTTCA+TGG | - | chr8_3:62730570-62730589 | None:intergenic | 35.0% | |
| CCATGAAGAAATTTCGATGA+AGG | + | chr8_3:62730567-62730586 | Msa1300950:CDS | 35.0% | |
| AACTGTCACATAGAACCAAA+TGG | - | chr8_3:62730633-62730652 | None:intergenic | 35.0% | |
| ! | GATTCAGGGTTAGTGTTTAG+TGG | - | chr8_3:62728138-62728157 | None:intergenic | 40.0% |
| ! | TGTGGTTGTGATGATGATCT+TGG | - | chr8_3:62728233-62728252 | None:intergenic | 40.0% |
| CTTCATCACCACAAGAATCA+TGG | + | chr8_3:62728270-62728289 | Msa1300950:CDS | 40.0% | |
| AGTTTCAAACCACAGAATCG+CGG | - | chr8_3:62728603-62728622 | None:intergenic | 40.0% | |
| GCAGCTAGGATTAACAAATC+AGG | - | chr8_3:62728671-62728690 | None:intergenic | 40.0% | |
| TTAATCCTAGCTGCGATTAC+TGG | + | chr8_3:62728677-62728696 | Msa1300950:CDS | 40.0% | |
| TCTCTGTTTAACGGTTCTAC+TGG | + | chr8_3:62728713-62728732 | Msa1300950:CDS | 40.0% | |
| CGAATACACGAGAAATACTC+CGG | - | chr8_3:62728767-62728786 | None:intergenic | 40.0% | |
| CAAATTCGTCGCGAATCAAA+CGG | - | chr8_3:62728797-62728816 | None:intergenic | 40.0% | |
| ATTTGCGCGATAGGTCTTAA+AGG | + | chr8_3:62728812-62728831 | Msa1300950:CDS | 40.0% | |
| CTGTTATCGTTGCTTCATGT+TGG | + | chr8_3:62728839-62728858 | Msa1300950:CDS | 40.0% | |
| ! | CTTTTCCTCTTCATGTAGCT+AGG | + | chr8_3:62728972-62728991 | Msa1300950:CDS | 40.0% |
| ATCTACTGTGCTCATGTTGA+TGG | + | chr8_3:62729154-62729173 | Msa1300950:CDS | 40.0% | |
| AATTCAGTTCTTGGGAGCAA+GGG | - | chr8_3:62729545-62729564 | None:intergenic | 40.0% | |
| AAATTCAGTTCTTGGGAGCA+AGG | - | chr8_3:62729546-62729565 | None:intergenic | 40.0% | |
| GGCTTCCTTGATTGTTATAG+AGG | + | chr8_3:62729623-62729642 | Msa1300950:intron | 40.0% | |
| !!! | TTTTCCAAGGGTATTACCCA+TGG | + | chr8_3:62729707-62729726 | Msa1300950:intron | 40.0% |
| ATCTGTATGTGATCACAGTG+GGG | + | chr8_3:62730084-62730103 | Msa1300950:intron | 40.0% | |
| ATCTGATTGGCATAAAACGG+CGG | - | chr8_3:62730188-62730207 | None:intergenic | 40.0% | |
| TCATGAAGGTAAGGAGAACT+GGG | - | chr8_3:62730250-62730269 | None:intergenic | 40.0% | |
| ! | ATGATGGGAAAATATGGGAC+TGG | + | chr8_3:62730344-62730363 | Msa1300950:CDS | 40.0% |
| GATTGCACAGTAGCATTAGA+TGG | + | chr8_3:62730433-62730452 | Msa1300950:CDS | 40.0% | |
| TGGAGCCAATTCTAACACTA+TGG | + | chr8_3:62730453-62730472 | Msa1300950:CDS | 40.0% | |
| ACTATGGTATCTATTGCTGG+TGG | + | chr8_3:62730469-62730488 | Msa1300950:CDS | 40.0% | |
| AGGCGGCTTCTATTATCATT+GGG | - | chr8_3:62730529-62730548 | None:intergenic | 40.0% | |
| TAGGCGGCTTCTATTATCAT+TGG | - | chr8_3:62730530-62730549 | None:intergenic | 40.0% | |
| TCACATAGAACCAAATGGTG+GGG | - | chr8_3:62730628-62730647 | None:intergenic | 40.0% | |
| GTCACATAGAACCAAATGGT+GGG | - | chr8_3:62730629-62730648 | None:intergenic | 40.0% | |
| TGTCACATAGAACCAAATGG+TGG | - | chr8_3:62730630-62730649 | None:intergenic | 40.0% | |
| TCCTCAGATCTAAACCCCAA+CGG | + | chr8_3:62728335-62728354 | Msa1300950:CDS | 45.0% | |
| TAGGGATTCAGGATCTCTGT+TGG | + | chr8_3:62728633-62728652 | Msa1300950:CDS | 45.0% | |
| ATCTCTGTTGGATTCAAGCG+CGG | + | chr8_3:62728645-62728664 | Msa1300950:CDS | 45.0% | |
| GTTCTACTGGACGATGTGTT+TGG | + | chr8_3:62728726-62728745 | Msa1300950:CDS | 45.0% | |
| !! | GCTTCATGTTGGTGATTCTG+AGG | + | chr8_3:62728850-62728869 | Msa1300950:CDS | 45.0% |
| !! | TCGTACCGATTCGACTGAAT+TGG | + | chr8_3:62728901-62728920 | Msa1300950:CDS | 45.0% |
| CTTGGCCAATTCAGTCGAAT+CGG | - | chr8_3:62728909-62728928 | None:intergenic | 45.0% | |
| GCAAACCTAGCTACATGAAG+AGG | - | chr8_3:62728980-62728999 | None:intergenic | 45.0% | |
| GGTTTGCATTCTCTCAGCTT+TGG | + | chr8_3:62728993-62729012 | Msa1300950:CDS | 45.0% | |
| ! | TTGCATTCTCTCAGCTTTGG+AGG | + | chr8_3:62728996-62729015 | Msa1300950:CDS | 45.0% |
| TGTTACATTTCCGAGGGAGT+TGG | + | chr8_3:62729030-62729049 | Msa1300950:CDS | 45.0% | |
| TCAAACACAACCAACTCCCT+CGG | - | chr8_3:62729043-62729062 | None:intergenic | 45.0% | |
| AAAAACTTGCCACAACCACG+AGG | - | chr8_3:62729103-62729122 | None:intergenic | 45.0% | |
| ATCCACTCGTTAGTAGGATC+AGG | - | chr8_3:62729136-62729155 | None:intergenic | 45.0% | |
| CAGTAGATCCACTCGTTAGT+AGG | - | chr8_3:62729142-62729161 | None:intergenic | 45.0% | |
| GGAGGAGATTGTATACGTGA+TGG | + | chr8_3:62729599-62729618 | Msa1300950:intron | 45.0% | |
| GGAGATTGTATACGTGATGG+TGG | + | chr8_3:62729602-62729621 | Msa1300950:intron | 45.0% | |
| TTTCAAAGCTGTTGGGCCAT+GGG | + | chr8_3:62729900-62729919 | Msa1300950:intron | 45.0% | |
| GGAAATGAAGAGACTGGAGA+GGG | - | chr8_3:62730005-62730024 | None:intergenic | 45.0% | |
| AGGAAATGAAGAGACTGGAG+AGG | - | chr8_3:62730006-62730025 | None:intergenic | 45.0% | |
| !! | GAAGAGTTGATGCCATCTGT+TGG | + | chr8_3:62730133-62730152 | Msa1300950:CDS | 45.0% |
| !! | CGGAAAGTATCGAAGGAGAA+GGG | - | chr8_3:62730168-62730187 | None:intergenic | 45.0% |
| !! | AAAACGGCGGAAAGTATCGA+AGG | - | chr8_3:62730175-62730194 | None:intergenic | 45.0% |
| TCTGGAGAGTGGTATCTGAT+TGG | - | chr8_3:62730201-62730220 | None:intergenic | 45.0% | |
| GATACCACTCTCCAGAACAT+TGG | + | chr8_3:62730205-62730224 | Msa1300950:CDS | 45.0% | |
| CTCATGAAGGTAAGGAGAAC+TGG | - | chr8_3:62730251-62730270 | None:intergenic | 45.0% | |
| CAGTTCTCCTTACCTTCATG+AGG | + | chr8_3:62730249-62730268 | Msa1300950:CDS | 45.0% | |
| GACTCGTCGCAAAAGTCAAA+AGG | - | chr8_3:62730286-62730305 | None:intergenic | 45.0% | |
| AGGGAATGCAGACACTCAAA+AGG | + | chr8_3:62730381-62730400 | Msa1300950:CDS | 45.0% | |
| TGGTATCTATTGCTGGTGGA+CGG | + | chr8_3:62730473-62730492 | Msa1300950:CDS | 45.0% | |
| TTATCATTGGGATGCTCCTG+TGG | - | chr8_3:62730517-62730536 | None:intergenic | 45.0% | |
| ! | CTGCACTCACAAACTTGCTT+TGG | + | chr8_3:62730595-62730614 | Msa1300950:CDS | 45.0% |
| TGGTTTATACCCCCACCATT+TGG | + | chr8_3:62730615-62730634 | Msa1300950:CDS | 45.0% | |
| CACATAGAACCAAATGGTGG+GGG | - | chr8_3:62730627-62730646 | None:intergenic | 45.0% | |
| !! | GATGATCTTGGTGATGCTCG+TGG | - | chr8_3:62728221-62728240 | None:intergenic | 50.0% |
| TCATGGGAATCAATGCTCCC+AGG | + | chr8_3:62728287-62728306 | Msa1300950:CDS | 50.0% | |
| ! | CCGAAGTTGTTGCGAGTTGA+GGG | - | chr8_3:62728314-62728333 | None:intergenic | 50.0% |
| CCCTCAACTCGCAACAACTT+CGG | + | chr8_3:62728311-62728330 | Msa1300950:CDS | 50.0% | |
| TCCGAAGTTGTTGCGAGTTG+AGG | - | chr8_3:62728315-62728334 | None:intergenic | 50.0% | |
| TGGAGATTGAACTGCCGGAA+GGG | - | chr8_3:62728373-62728392 | None:intergenic | 50.0% | |
| ATGGAGATTGAACTGCCGGA+AGG | - | chr8_3:62728374-62728393 | None:intergenic | 50.0% | |
| GACGATGGAGATTGAACTGC+CGG | - | chr8_3:62728378-62728397 | None:intergenic | 50.0% | |
| CAATCTCCATCGTCGACACA+CGG | + | chr8_3:62728384-62728403 | Msa1300950:CDS | 50.0% | |
| AACGGAAGTTACGAACGGTC+CGG | - | chr8_3:62728459-62728478 | None:intergenic | 50.0% | |
| CAGCGAACGGAAGTTACGAA+CGG | - | chr8_3:62728464-62728483 | None:intergenic | 50.0% | |
| AAAGGAGGTGGCGATTGAGA+GGG | - | chr8_3:62728496-62728515 | None:intergenic | 50.0% | |
| AATGCGACCTTGACGATCAC+CGG | - | chr8_3:62728555-62728574 | None:intergenic | 50.0% | |
| GTCTCAAATCCGCGATTCTG+TGG | + | chr8_3:62728591-62728610 | Msa1300950:CDS | 50.0% | |
| AAGGTCCAGTAATCGCAGCT+AGG | - | chr8_3:62728685-62728704 | None:intergenic | 50.0% | |
| ! | TTGGAAGTACGATGCTTCGC+CGG | + | chr8_3:62728745-62728764 | Msa1300950:CDS | 50.0% |
| !!! | TTTTACCGGTGCTGCAACAC+CGG | + | chr8_3:62728940-62728959 | Msa1300950:CDS | 50.0% |
| AGAGGAAAAGCTGCAGAAGC+CGG | - | chr8_3:62728962-62728981 | None:intergenic | 50.0% | |
| TGCCTGATCCTACTAACGAG+TGG | + | chr8_3:62729131-62729150 | Msa1300950:CDS | 50.0% | |
| ! | TTGATGGCAAGCTTAGCACC+TGG | + | chr8_3:62729170-62729189 | Msa1300950:CDS | 50.0% |
| CACTTACGGTTTCCTCTTCC+AGG | - | chr8_3:62729191-62729210 | None:intergenic | 50.0% | |
| CTAGAGTTGCATGCGTCCAT+GGG | - | chr8_3:62729726-62729745 | None:intergenic | 50.0% | |
| !! | CATGGCCCAACAGCTTTGAA+AGG | - | chr8_3:62729901-62729920 | None:intergenic | 50.0% |
| CTTTCAAAGCTGTTGGGCCA+TGG | + | chr8_3:62729899-62729918 | Msa1300950:intron | 50.0% | |
| TATCGAAGGAGAAGGGACAG+AGG | - | chr8_3:62730161-62730180 | None:intergenic | 50.0% | |
| !! | GCGGAAAGTATCGAAGGAGA+AGG | - | chr8_3:62730169-62730188 | None:intergenic | 50.0% |
| !! | CTTGCCAATGTTCTGGAGAG+TGG | - | chr8_3:62730212-62730231 | None:intergenic | 50.0% |
| ! | ACTGGCTCTTGACTGCTGAA+GGG | + | chr8_3:62730362-62730381 | Msa1300950:CDS | 50.0% |
| ! | GGTATCTATTGCTGGTGGAC+GGG | + | chr8_3:62730474-62730493 | Msa1300950:CDS | 50.0% |
| GGTGGACGGGAACTAAATGT+AGG | + | chr8_3:62730487-62730506 | Msa1300950:CDS | 50.0% | |
| GACGGGAACTAAATGTAGGC+AGG | + | chr8_3:62730491-62730510 | Msa1300950:CDS | 50.0% | |
| ACTAAATGTAGGCAGGCCAC+AGG | + | chr8_3:62730498-62730517 | Msa1300950:CDS | 50.0% | |
| TCATGGTTGGACGTTGAGCT+TGG | - | chr8_3:62730553-62730572 | None:intergenic | 50.0% | |
| ! | TGTTGCGAGTTGAGGGACCT+GGG | - | chr8_3:62728307-62728326 | None:intergenic | 55.0% |
| ! | TTGTTGCGAGTTGAGGGACC+TGG | - | chr8_3:62728308-62728327 | None:intergenic | 55.0% |
| GCCGTTGGGGTTTAGATCTG+AGG | - | chr8_3:62728339-62728358 | None:intergenic | 55.0% | |
| ! | CATTGACCGTGTGTCGACGA+TGG | - | chr8_3:62728393-62728412 | None:intergenic | 55.0% |
| CGTTCGTAACTTCCGTTCGC+TGG | + | chr8_3:62728462-62728481 | Msa1300950:CDS | 55.0% | |
| GAAAGGAGGTGGCGATTGAG+AGG | - | chr8_3:62728497-62728516 | None:intergenic | 55.0% | |
| AAGGCTCGGATGAAAGGAGG+TGG | - | chr8_3:62728508-62728527 | None:intergenic | 55.0% | |
| AGGAAGGCTCGGATGAAAGG+AGG | - | chr8_3:62728511-62728530 | None:intergenic | 55.0% | |
| AGGAGGAAGGCTCGGATGAA+AGG | - | chr8_3:62728514-62728533 | None:intergenic | 55.0% | |
| TCGCGACGAATTTGCGCGAT+AGG | + | chr8_3:62728803-62728822 | Msa1300950:CDS | 55.0% | |
| GCAAGCTTAGCACCTGGAAG+AGG | + | chr8_3:62729176-62729195 | Msa1300950:CDS | 55.0% | |
| GCGTCCATGGGTAATACCCT+TGG | - | chr8_3:62729714-62729733 | None:intergenic | 55.0% | |
| CCTAGAGTTGCATGCGTCCA+TGG | - | chr8_3:62729727-62729746 | None:intergenic | 55.0% | |
| CCATGGACGCATGCAACTCT+AGG | + | chr8_3:62729724-62729743 | Msa1300950:intron | 55.0% | |
| TGAAGAGACTGGAGAGGGAG+AGG | - | chr8_3:62730000-62730019 | None:intergenic | 55.0% | |
| ! | GACTGGCTCTTGACTGCTGA+AGG | + | chr8_3:62730361-62730380 | Msa1300950:CDS | 55.0% |
| TGGACGTTGAGCTTGGTAGG+CGG | - | chr8_3:62730546-62730565 | None:intergenic | 55.0% | |
| GGTTGGACGTTGAGCTTGGT+AGG | - | chr8_3:62730549-62730568 | None:intergenic | 55.0% | |
| AACTGCCGGAAGGGAATGCG+AGG | - | chr8_3:62728364-62728383 | None:intergenic | 60.0% | |
| TGGTGGAGGGATGGGGAAAG+TGG | - | chr8_3:62728426-62728445 | None:intergenic | 60.0% | |
| GGAAGTTACGAACGGTCCGG+CGG | - | chr8_3:62728456-62728475 | None:intergenic | 60.0% | |
| AGGGAGAGGGATCCAGCGAA+CGG | - | chr8_3:62728477-62728496 | None:intergenic | 60.0% | |
| GGTGGCGATTGAGAGGGAGA+GGG | - | chr8_3:62728490-62728509 | None:intergenic | 60.0% | |
| AGGTGGCGATTGAGAGGGAG+AGG | - | chr8_3:62728491-62728510 | None:intergenic | 60.0% | |
| GAGGTGAGAGGAGGAAGGCT+CGG | - | chr8_3:62728522-62728541 | None:intergenic | 60.0% | |
| AGGAGGAGGTGAGAGGAGGA+AGG | - | chr8_3:62728527-62728546 | None:intergenic | 60.0% | |
| !! | AGAAGCCGGTGTTGCAGCAC+CGG | - | chr8_3:62728948-62728967 | None:intergenic | 60.0% |
| TTTGCGTCGTCGTTGCCTCG+TGG | + | chr8_3:62729085-62729104 | Msa1300950:CDS | 60.0% | |
| TCGTCGTTGCCTCGTGGTTG+TGG | + | chr8_3:62729091-62729110 | Msa1300950:CDS | 60.0% | |
| !! | GGGACAGAGGTGCCAACAGA+TGG | - | chr8_3:62730148-62730167 | None:intergenic | 60.0% |
| GGAATGCGAGGAGGCCGTTG+GGG | - | chr8_3:62728352-62728371 | None:intergenic | 65.0% | |
| GGGAATGCGAGGAGGCCGTT+GGG | - | chr8_3:62728353-62728372 | None:intergenic | 65.0% | |
| AGGGAATGCGAGGAGGCCGT+TGG | - | chr8_3:62728354-62728373 | None:intergenic | 65.0% | |
| GGCCTCCTCGCATTCCCTTC+CGG | + | chr8_3:62728356-62728375 | Msa1300950:CDS | 65.0% | |
| TGCCGGAAGGGAATGCGAGG+AGG | - | chr8_3:62728361-62728380 | None:intergenic | 65.0% | |
| !! | AGGACGGTGGTGGAGGGATG+GGG | - | chr8_3:62728433-62728452 | None:intergenic | 65.0% |
| !! | GAGGACGGTGGTGGAGGGAT+GGG | - | chr8_3:62728434-62728453 | None:intergenic | 65.0% |
| AGTTACGAACGGTCCGGCGG+AGG | - | chr8_3:62728453-62728472 | None:intergenic | 65.0% | |
| GCGACCTTGACGATCACCGG+CGG | - | chr8_3:62728552-62728571 | None:intergenic | 65.0% | |
| !! | GGAGGACGGTGGTGGAGGGA+TGG | - | chr8_3:62728435-62728454 | None:intergenic | 70.0% |
| ACGAACGGTCCGGCGGAGGA+CGG | - | chr8_3:62728449-62728468 | None:intergenic | 70.0% | |
| GGCGAGGAGGAGGTGAGAGG+AGG | - | chr8_3:62728531-62728550 | None:intergenic | 70.0% | |
| TCTCACCTCCTCCTCGCCGC+CGG | + | chr8_3:62728533-62728552 | Msa1300950:CDS | 70.0% | |
| CTTGACGATCACCGGCGGCG+AGG | - | chr8_3:62728547-62728566 | None:intergenic | 70.0% | |
| CTCGCCGCCGGTGATCGTCA+AGG | + | chr8_3:62728545-62728564 | Msa1300950:CDS | 70.0% | |
| !! | CGGCGGAGGACGGTGGTGGA+GGG | - | chr8_3:62728439-62728458 | None:intergenic | 75.0% |
| CCTCCACCACCGTCCTCCGC+CGG | + | chr8_3:62728437-62728456 | Msa1300950:CDS | 75.0% | |
| AACGGTCCGGCGGAGGACGG+TGG | - | chr8_3:62728446-62728465 | None:intergenic | 75.0% | |
| GGCGGCGAGGAGGAGGTGAG+AGG | - | chr8_3:62728534-62728553 | None:intergenic | 75.0% | |
| GATCACCGGCGGCGAGGAGG+AGG | - | chr8_3:62728541-62728560 | None:intergenic | 75.0% | |
| GACGATCACCGGCGGCGAGG+AGG | - | chr8_3:62728544-62728563 | None:intergenic | 75.0% | |
| !! | CCGGCGGAGGACGGTGGTGG+AGG | - | chr8_3:62728440-62728459 | None:intergenic | 80.0% |
| ! | GGTCCGGCGGAGGACGGTGG+TGG | - | chr8_3:62728443-62728462 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 62728123 | 62730669 | 62728123 | ID=Msa1300950;Name=Msa1300950 |
| chr8_3 | mRNA | 62728123 | 62730669 | 62728123 | ID=Msa1300950-mRNA-1;Parent=Msa1300950;Name=Msa1300950-mRNA-1;_AED=0.03;_eAED=0.03;_QI=74|1|0.5|1|1|1|2|0|524 |
| chr8_3 | exon | 62728123 | 62729203 | 62728123 | ID=Msa1300950-mRNA-1:exon:18616;Parent=Msa1300950-mRNA-1 |
| chr8_3 | exon | 62730102 | 62730669 | 62730102 | ID=Msa1300950-mRNA-1:exon:18617;Parent=Msa1300950-mRNA-1 |
| chr8_3 | five_prime_UTR | 62728123 | 62728196 | 62728123 | ID=Msa1300950-mRNA-1:five_prime_utr;Parent=Msa1300950-mRNA-1 |
| chr8_3 | CDS | 62728197 | 62729203 | 62728197 | ID=Msa1300950-mRNA-1:cds;Parent=Msa1300950-mRNA-1 |
| chr8_3 | CDS | 62730102 | 62730669 | 62730102 | ID=Msa1300950-mRNA-1:cds;Parent=Msa1300950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
