AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0208020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0208020 MtrunA17_Chr2g0307011 98.143 377 7 0 1 377 1 377 0.0 773
Msa0208020 MtrunA17_Chr3g0081621 35.000 320 193 5 56 366 140 453 1.24e-55 190
Msa0208020 MtrunA17_Chr8g0354091 34.146 328 194 7 48 366 41 355 5.73e-55 185
Msa0208020 MtrunA17_Chr6g0466631 34.365 323 189 6 59 366 29 343 1.55e-54 183
Msa0208020 MtrunA17_Chr1g0201341 33.846 325 190 8 57 365 27 342 8.02e-50 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0208020 AT2G26830.1 63.610 349 127 0 24 372 22 370 8.44e-171 481
Msa0208020 AT4G09760.1 35.897 312 184 6 64 366 38 342 2.55e-56 188
Msa0208020 AT4G09760.2 35.897 312 184 6 64 366 38 342 2.55e-56 188
Msa0208020 AT1G74320.1 32.515 326 197 9 56 368 32 347 2.71e-53 180
Msa0208020 AT1G71697.1 30.058 346 222 7 31 365 8 344 2.73e-48 167
Msa0208020 AT4G09760.3 30.729 192 125 4 64 253 38 223 3.40e-22 95.1
Msa0208020 AT4G09760.4 29.714 175 115 4 64 236 38 206 3.90e-18 82.8

Find 94 sgRNAs with CRISPR-Local

Find 752 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATATTGTTCGTTCATATT+TGG 0.100547 2_1:-42150728 None:intergenic
TCTCACAATGACTTGCTTTC+TGG 0.116891 2_1:+42149686 Msa0208020:CDS
TTGCAGTTGTTTGGCTATTT+TGG 0.127146 2_1:-42145021 None:intergenic
GCAGCATCTGTTCTAGAATT+TGG 0.157391 2_1:+42146420 Msa0208020:intron
TTTAAAGTTGAGAAAATTTC+TGG 0.169623 2_1:+42142467 Msa0208020:CDS
GCTAAGTGGCTTGGAATATT+TGG 0.191747 2_1:+42143869 Msa0208020:CDS
ATAATCAATAATACTAATAA+TGG 0.249750 2_1:+42141749 Msa0208020:exon
TCCTATTCTGTCTTTCGAAT+TGG 0.255059 2_1:-42141586 None:intergenic
TCTACTCATTCCTTTCTAAA+AGG 0.267387 2_1:-42152335 None:intergenic
CTCAATTATGGAATGATATC+TGG 0.267418 2_1:+42145081 Msa0208020:CDS
GATATTGTTCGTTCATATTT+GGG 0.276266 2_1:-42150727 None:intergenic
GTATTGTAATCCAGAAAATT+AGG 0.282777 2_1:+42152543 Msa0208020:three_prime_UTR
TACATCACTGCTGCAGGATT+TGG 0.299530 2_1:+42143845 Msa0208020:CDS
CCAATAGAATTTGATTATCT+TGG 0.305896 2_1:+42152243 Msa0208020:CDS
CAAGATAATCAAATTCTATT+GGG 0.308596 2_1:-42152242 None:intergenic
CCTATTCTGTCTTTCGAATT+GGG 0.312336 2_1:-42141585 None:intergenic
CCAAGATAATCAAATTCTAT+TGG 0.314209 2_1:-42152243 None:intergenic
GCTCTAAGGAACCTCAATTA+TGG 0.322165 2_1:+42145069 Msa0208020:CDS
ACTACGATCAAGGCAAATTT+AGG 0.324943 2_1:+42152486 Msa0208020:three_prime_UTR
AAAGGAGAATGGTGTTTATT+CGG 0.342021 2_1:-42141613 None:intergenic
AACATTTAACTACATGAATC+AGG 0.346353 2_1:-42152407 None:intergenic
TCAATGATATGCTCGGTGTT+GGG 0.351100 2_1:-42142777 None:intergenic
TTCAAGACCTGGTCAAGTTT+AGG 0.351629 2_1:+42142434 Msa0208020:CDS
TGGATTACAATACAACAATA+AGG 0.362339 2_1:-42152533 None:intergenic
ACGAACAATATCATTTCTTC+AGG 0.383658 2_1:+42150738 Msa0208020:CDS
GCTTGTTCTGCGATTTCAAC+GGG 0.403905 2_1:-42141795 None:intergenic
TGATCGCTTTCGAGAATTGC+AGG 0.404652 2_1:+42142797 Msa0208020:CDS
TTCAGATGACATAATTTGTT+CGG 0.410215 2_1:+42152652 Msa0208020:three_prime_UTR
TGTGGAAATTCCAGGCTCTA+AGG 0.418229 2_1:+42145055 Msa0208020:CDS
ATTACCTCTTGAGGTCTGTC+TGG 0.424572 2_1:-42150773 None:intergenic
TGGCTTGGAATATTTGGAAA+TGG 0.427165 2_1:+42143875 Msa0208020:CDS
ATCAATGATATGCTCGGTGT+TGG 0.428005 2_1:-42142778 None:intergenic
CAGATATCATTCCATAATTG+AGG 0.428787 2_1:-42145080 None:intergenic
ATTATAACCATCAGATTGTA+TGG 0.431135 2_1:+42142753 Msa0208020:CDS
TAATCAATAATACTAATAAT+GGG 0.441137 2_1:+42141750 Msa0208020:exon
AAGGGAAAGAGAAGGATCAA+TGG 0.457811 2_1:-42141859 None:intergenic
ATCAAATACATCACTGCTGC+AGG 0.459460 2_1:+42143839 Msa0208020:CDS
TGGGTGGAAAAGTTAAGATC+TGG 0.470594 2_1:+42141769 Msa0208020:CDS
AATTGAGGTTCCTTAGAGCC+TGG 0.470783 2_1:-42145065 None:intergenic
GTATGCGCTCACTACGATCA+AGG 0.474926 2_1:+42152476 Msa0208020:three_prime_UTR
GCGCATACTCTTGCTCCATC+AGG 0.478124 2_1:+42143920 Msa0208020:CDS
AGATATGCGAGAACCAAAAC+TGG 0.481384 2_1:+42144995 Msa0208020:intron
TTCGATACAACGAGTACAAA+AGG 0.487153 2_1:+42152277 Msa0208020:CDS
TAGGCCTTTAGTTTGAGCTC+TGG 0.487772 2_1:+42152505 Msa0208020:three_prime_UTR
AGGACTAGTGATCGTATCAT+TGG 0.488928 2_1:+42141551 Msa0208020:five_prime_UTR
AGCTTGTTCTGCGATTTCAA+CGG 0.491199 2_1:-42141796 None:intergenic
TTACAAGACAGTTTCATTCA+AGG 0.491822 2_1:+42146464 Msa0208020:CDS
AACTACAGAGGCTATGACAT+AGG 0.495161 2_1:+42150542 Msa0208020:CDS
CATTCTTTCTAGATGTATTG+TGG 0.495682 2_1:+42152583 Msa0208020:three_prime_UTR
TCTTAAAACTTTGTATGTTG+AGG 0.497216 2_1:+42152065 Msa0208020:CDS
TGATGAAATTTATGAGCTCC+AGG 0.497219 2_1:+42146494 Msa0208020:CDS
TTTCACGGTGTGGAAATTCC+AGG 0.499815 2_1:+42145047 Msa0208020:CDS
TGCAGCAGTGATGTATTTGA+TGG 0.502189 2_1:-42143837 None:intergenic
CTGAAGGTTTCGGTTAAACA+AGG 0.517757 2_1:+42142714 Msa0208020:CDS
TTGAAATCGCAGAACAAGCT+CGG 0.518498 2_1:+42141799 Msa0208020:CDS
GGATCAATGGAGAGAAGAGA+AGG 0.518927 2_1:-42141846 None:intergenic
CAATGATATGCTCGGTGTTG+GGG 0.521995 2_1:-42142776 None:intergenic
GGATTTGGTGCTAAGTGGCT+TGG 0.523784 2_1:+42143860 Msa0208020:CDS
GCTACCAGAGCTCAAACTAA+AGG 0.526105 2_1:-42152509 None:intergenic
CTGCAGGATTTGGTGCTAAG+TGG 0.526710 2_1:+42143855 Msa0208020:CDS
GAAAGAAAAGCTTGTATCGA+TGG 0.527863 2_1:+42152302 Msa0208020:CDS
AATCACTTTGCAGAATATGC+TGG 0.528361 2_1:+42150566 Msa0208020:CDS
ATGACAAGAGGTGTCATTTG+AGG 0.530129 2_1:-42141882 None:intergenic
AGATAGTTTCTACTTCATCA+AGG 0.534604 2_1:+42152357 Msa0208020:three_prime_UTR
ATAATGATTAATCATGAAGA+AGG 0.535615 2_1:+42149713 Msa0208020:CDS
CCCAATTCGAAAGACAGAAT+AGG 0.536024 2_1:+42141585 Msa0208020:five_prime_UTR
ACTACAGAGGCTATGACATA+GGG 0.549695 2_1:+42150543 Msa0208020:CDS
CAAGAGGTGTCATTTGAGGA+AGG 0.560993 2_1:-42141878 None:intergenic
ACAGCCAGACAGACCTCAAG+AGG 0.575109 2_1:+42150769 Msa0208020:CDS
TGAATGCAGTAATTTGTGCA+AGG 0.578273 2_1:+42142406 Msa0208020:intron
GTCTTTCGAATTGGGCGGTG+TGG 0.581990 2_1:-42141577 None:intergenic
TGAGGTAAATACATATGCAC+TGG 0.582931 2_1:+42152083 Msa0208020:CDS
ACTGTGATTATTACCTCTTG+AGG 0.585155 2_1:-42150782 None:intergenic
CTCATTCCTTTCTAAAAGGT+AGG 0.596387 2_1:-42152331 None:intergenic
ATGTTTGTGAGAATGAGAAA+AGG 0.598143 2_1:-42141631 None:intergenic
AGAGTTACTGACATGACAAG+AGG 0.598713 2_1:-42141894 None:intergenic
AAGATAATCAAATTCTATTG+GGG 0.603378 2_1:-42152241 None:intergenic
AAAGCGATCAATGATATGCT+CGG 0.607018 2_1:-42142784 None:intergenic
ATTTGAGGAAGGGAAAGAGA+AGG 0.609170 2_1:-42141867 None:intergenic
AAGAGGTGTCATTTGAGGAA+GGG 0.609628 2_1:-42141877 None:intergenic
TGAGAATGAGAAAAGGAGAA+TGG 0.613006 2_1:-42141624 None:intergenic
GAAGGTTTCGGTTAAACAAG+GGG 0.617236 2_1:+42142716 Msa0208020:CDS
AATCGATGAGAAAGATTCAG+AGG 0.617397 2_1:-42141724 None:intergenic
AAAGTTGAGAAAATTTCTGG+AGG 0.619890 2_1:+42142470 Msa0208020:CDS
CGATGAGAAAGATTCAGAGG+TGG 0.620503 2_1:-42141721 None:intergenic
GCAAGGACATGTTCAAGACC+TGG 0.621936 2_1:+42142423 Msa0208020:CDS
GTTGGGGCCATACAATCTGA+TGG 0.622325 2_1:-42142760 None:intergenic
AGAATCACCTAAACTTGACC+AGG 0.623881 2_1:-42142441 None:intergenic
ACATTTAACTACATGAATCA+GGG 0.626795 2_1:-42152406 None:intergenic
TCAATAATACTAATAATGGG+TGG 0.633491 2_1:+42141753 Msa0208020:exon
TGAAGGTTTCGGTTAAACAA+GGG 0.654561 2_1:+42142715 Msa0208020:CDS
ATTCTGTCTTTCGAATTGGG+CGG 0.659114 2_1:-42141582 None:intergenic
CAGAGACCAGAAAAGGTGTG+AGG 0.696052 2_1:-42152106 None:intergenic
TATGCATCATACAACTACAG+AGG 0.713439 2_1:+42150530 Msa0208020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATAAATAAAAATTA+AGG + chr2_1:42146937-42146956 Msa0208020:intron 0.0%
!! ATAATCAATAATACTAATAA+TGG + chr2_1:42141749-42141768 Msa0208020:exon 10.0%
!! TAATCAATAATACTAATAAT+GGG + chr2_1:42141750-42141769 Msa0208020:exon 10.0%
!!! TATGATAATTTTGAATTTAT+TGG - chr2_1:42143583-42143602 None:intergenic 10.0%
!!! AATGAATTTTAATCAAATTA+TGG - chr2_1:42146906-42146925 None:intergenic 10.0%
!! TAAATAAATAAAAATTAAGG+TGG + chr2_1:42146940-42146959 Msa0208020:intron 10.0%
!!! AATGAATTTTAAACAAATTA+TGG + chr2_1:42147272-42147291 Msa0208020:intron 10.0%
!! AAAAAAAAAAAAAACATAGT+AGG - chr2_1:42147481-42147500 None:intergenic 10.0%
!! AAGCTAATAAAATAAATTAT+TGG - chr2_1:42147620-42147639 None:intergenic 10.0%
!! TACATTTCAAATTATATAAA+CGG - chr2_1:42147790-42147809 None:intergenic 10.0%
!!! GAAATAAATATTTATTGTTT+TGG - chr2_1:42149953-42149972 None:intergenic 10.0%
!! AGATTTACTAATAAATAAAT+AGG - chr2_1:42150447-42150466 None:intergenic 10.0%
!!! AATTTGAATTATTGAGTTTT+GGG + chr2_1:42142322-42142341 Msa0208020:intron 15.0%
!! AAAAAAATCCAACAAAAAAT+TGG - chr2_1:42143110-42143129 None:intergenic 15.0%
!! TAAAGAACAAATTTATGAAA+AGG + chr2_1:42143200-42143219 Msa0208020:intron 15.0%
!! AAAGAACAAATTTATGAAAA+GGG + chr2_1:42143201-42143220 Msa0208020:intron 15.0%
!! TGAGATTTAATTAAAAAAGT+TGG - chr2_1:42144393-42144412 None:intergenic 15.0%
!!! TTTCTTTTTTCTTGAATTTT+GGG - chr2_1:42145566-42145585 None:intergenic 15.0%
!!! ATTTCTTTTTTCTTGAATTT+TGG - chr2_1:42145567-42145586 None:intergenic 15.0%
!!! TGAATTTTAAGTAATGTTTA+AGG - chr2_1:42145813-42145832 None:intergenic 15.0%
!! AAAGTAATATACAAACATAA+CGG - chr2_1:42146547-42146566 None:intergenic 15.0%
!!! AAAACTTTTAGATTTAAGAT+TGG + chr2_1:42146630-42146649 Msa0208020:intron 15.0%
!! ATTAAATAACAAAATTAAGG+TGG - chr2_1:42147240-42147259 None:intergenic 15.0%
!! AATATTATATATGCATAACT+TGG + chr2_1:42147966-42147985 Msa0208020:intron 15.0%
!!! AAATATTAAGTTTTATTCCT+AGG + chr2_1:42148833-42148852 Msa0208020:intron 15.0%
!! AAAACCAAATAAATAGAAAT+TGG + chr2_1:42149394-42149413 Msa0208020:intron 15.0%
!! TAATCCAATTTCTATTTATT+TGG - chr2_1:42149401-42149420 None:intergenic 15.0%
!! TAGTTTATAATAAAGTCATA+AGG + chr2_1:42150339-42150358 Msa0208020:intron 15.0%
!!! TATCTTTTTATTTTGACTTT+TGG + chr2_1:42150990-42151009 Msa0208020:intron 15.0%
!!! ATCTTTTTATTTTGACTTTT+GGG + chr2_1:42150991-42151010 Msa0208020:intron 15.0%
!!! TTAACTACTTTTTTTTTATC+AGG - chr2_1:42152434-42152453 None:intergenic 15.0%
!! AAAGTGAAAAAATTTGCAAA+AGG - chr2_1:42141954-42141973 None:intergenic 20.0%
!!! CAAGCAATCATTTTTTTTTA+AGG - chr2_1:42142149-42142168 None:intergenic 20.0%
!! CTTAAAAAAAAATGATTGCT+TGG + chr2_1:42142147-42142166 Msa0208020:intron 20.0%
!! TTCTAATTACTTAGTTATTG+CGG + chr2_1:42142238-42142257 Msa0208020:intron 20.0%
!! ACATTTCAATTTCTTTGATT+TGG + chr2_1:42142272-42142291 Msa0208020:intron 20.0%
!!! GAATTTGAATTATTGAGTTT+TGG + chr2_1:42142321-42142340 Msa0208020:intron 20.0%
!!! ATTTGAATTATTGAGTTTTG+GGG + chr2_1:42142323-42142342 Msa0208020:intron 20.0%
!!! TTTAAAGTTGAGAAAATTTC+TGG + chr2_1:42142467-42142486 Msa0208020:CDS 20.0%
!! AATAATATCACAAAATACTC+AGG - chr2_1:42142600-42142619 None:intergenic 20.0%
!!! TTCATTTTATGTACAAAACA+TGG + chr2_1:42142837-42142856 Msa0208020:intron 20.0%
!! ATCAATAAAACAACAAAAGT+GGG - chr2_1:42143047-42143066 None:intergenic 20.0%
!!! ACTTTTGTTGTTTTATTGAT+GGG + chr2_1:42143047-42143066 Msa0208020:intron 20.0%
!! AAGAACAAATTTATGAAAAG+GGG + chr2_1:42143202-42143221 Msa0208020:intron 20.0%
!! TTGAAATACATTGTAAATTC+TGG - chr2_1:42143420-42143439 None:intergenic 20.0%
!! TTTCTTGAATATGCTTAATA+AGG + chr2_1:42143486-42143505 Msa0208020:intron 20.0%
!! ATTAACAAAGATTATGAAGA+GGG + chr2_1:42143540-42143559 Msa0208020:intron 20.0%
!!! TTTTTTTAATTTGTACCTGA+TGG - chr2_1:42143938-42143957 None:intergenic 20.0%
!! TGATATGTATTAAGTTATCA+TGG - chr2_1:42144351-42144370 None:intergenic 20.0%
!! AAATAAAATACCAAAGAAAG+TGG + chr2_1:42144563-42144582 Msa0208020:intron 20.0%
!! AGTAAGTTATACTATGATAT+TGG + chr2_1:42144877-42144896 Msa0208020:intron 20.0%
!! CAAAGTTCATATTAGTTATA+GGG - chr2_1:42145136-42145155 None:intergenic 20.0%
!! TCAAAGTTCATATTAGTTAT+AGG - chr2_1:42145137-42145156 None:intergenic 20.0%
!! AAATAGCTTATGATATTAGA+AGG + chr2_1:42145320-42145339 Msa0208020:intron 20.0%
!! ACTTGATCAGTATATTAAAA+TGG + chr2_1:42145474-42145493 Msa0208020:intron 20.0%
!!! TTCTTTTTTCTTGAATTTTG+GGG - chr2_1:42145565-42145584 None:intergenic 20.0%
!! ATTGTATTATTGAATGTAGA+TGG + chr2_1:42145585-42145604 Msa0208020:intron 20.0%
!! TTGTATTATTGAATGTAGAT+GGG + chr2_1:42145586-42145605 Msa0208020:intron 20.0%
!! ATAGAAAAAGTTAGATAACA+AGG - chr2_1:42146301-42146320 None:intergenic 20.0%
!! CAAATGAAAACAAAAAGTTA+AGG - chr2_1:42146401-42146420 None:intergenic 20.0%
!! AAAGTGATCAAAAATTTAAC+AGG - chr2_1:42146673-42146692 None:intergenic 20.0%
!!! ATGCATTTAGTTTATTTTCA+GGG - chr2_1:42147133-42147152 None:intergenic 20.0%
!!! TGCGTATATAAATGAAATTT+TGG + chr2_1:42147535-42147554 Msa0208020:intron 20.0%
!!! TTATGAGTTTTGATAGATTT+TGG - chr2_1:42147571-42147590 None:intergenic 20.0%
!!! ACTGAAATGTTAAGTTATTT+TGG - chr2_1:42147656-42147675 None:intergenic 20.0%
!! ATTTCAATGTTGCTAAAAAA+TGG - chr2_1:42147714-42147733 None:intergenic 20.0%
!! TTAATATGTGTCTTGTAAAT+AGG - chr2_1:42147887-42147906 None:intergenic 20.0%
!!! TCGTTTTGTAATAAATATCT+TGG - chr2_1:42148603-42148622 None:intergenic 20.0%
!!! CTTTGGTAAATTCTTTAAAA+TGG + chr2_1:42149544-42149563 Msa0208020:intron 20.0%
!!! TATATTTTTTATGTTGCAAC+AGG + chr2_1:42149628-42149647 Msa0208020:intron 20.0%
!! TCATTGTGAGAAAAAATTAT+AGG - chr2_1:42149677-42149696 None:intergenic 20.0%
!! ATAATGATTAATCATGAAGA+AGG + chr2_1:42149713-42149732 Msa0208020:CDS 20.0%
!! TAAATGCAACATACAAAAAA+TGG - chr2_1:42149892-42149911 None:intergenic 20.0%
!!! TTTCTTCAATAGTTTTGAAA+TGG + chr2_1:42150142-42150161 Msa0208020:intron 20.0%
!!! TATTCAATATTTTATCATGC+AGG + chr2_1:42150702-42150721 Msa0208020:intron 20.0%
!! AAAATGTCAAATTGATACTT+GGG + chr2_1:42151105-42151124 Msa0208020:intron 20.0%
!!! AAGATTTTACAATTCAAATC+GGG - chr2_1:42151189-42151208 None:intergenic 20.0%
!!! CAAGATTTTACAATTCAAAT+CGG - chr2_1:42151190-42151209 None:intergenic 20.0%
!!! TAATCCTATTTTTGTAGAAT+AGG + chr2_1:42151255-42151274 Msa0208020:intron 20.0%
!!! AATCCTATTTTTGTAGAATA+GGG + chr2_1:42151256-42151275 Msa0208020:intron 20.0%
!! TCATTTGGAAATTAATTAGA+AGG - chr2_1:42151402-42151421 None:intergenic 20.0%
!! GTACTATTTAACTGTAATAT+AGG + chr2_1:42151966-42151985 Msa0208020:intron 20.0%
!!! ATATAGGTTATTTTCTTTTC+CGG + chr2_1:42151982-42152001 Msa0208020:intron 20.0%
!! TTATATAAATGTAATACAGC+CGG - chr2_1:42152004-42152023 None:intergenic 20.0%
!! TATTTCTTTGCATAATAAAC+AGG + chr2_1:42152209-42152228 Msa0208020:intron 20.0%
!! AAGATAATCAAATTCTATTG+GGG - chr2_1:42152244-42152263 None:intergenic 20.0%
!! CAAGATAATCAAATTCTATT+GGG - chr2_1:42152245-42152264 None:intergenic 20.0%
!!! GATCTTTACAAATTTTGATA+TGG + chr2_1:42152607-42152626 Msa0208020:three_prime_UTR 20.0%
!! TCAATAATACTAATAATGGG+TGG + chr2_1:42141753-42141772 Msa0208020:exon 25.0%
!!! TCTAACTGATTTTTTTTCCT+CGG - chr2_1:42142040-42142059 None:intergenic 25.0%
! AAAAAAAGGGAAATGTTAAC+TGG + chr2_1:42142101-42142120 Msa0208020:intron 25.0%
!!! ATTTCTTTGATTTGGACTAA+TGG + chr2_1:42142280-42142299 Msa0208020:intron 25.0%
!!! TTTCTTTGATTTGGACTAAT+GGG + chr2_1:42142281-42142300 Msa0208020:intron 25.0%
!!! GAAAAGTGTTTGTAATTAGT+TGG + chr2_1:42142628-42142647 Msa0208020:intron 25.0%
!! ATCAAATATCAACTAGTTTG+AGG - chr2_1:42142671-42142690 None:intergenic 25.0%
!!! TCATTATTTTTCAGTACTGA+AGG + chr2_1:42142698-42142717 Msa0208020:intron 25.0%
! ATTATAACCATCAGATTGTA+TGG + chr2_1:42142753-42142772 Msa0208020:CDS 25.0%
! GCAACATCAATACAAAATAA+TGG - chr2_1:42142884-42142903 None:intergenic 25.0%
! AATACAGATTCACTCAAAAT+GGG - chr2_1:42143014-42143033 None:intergenic 25.0%
! TAATACAGATTCACTCAAAA+TGG - chr2_1:42143015-42143034 None:intergenic 25.0%
! TCAATAAAACAACAAAAGTG+GGG - chr2_1:42143046-42143065 None:intergenic 25.0%
! CATCAATAAAACAACAAAAG+TGG - chr2_1:42143048-42143067 None:intergenic 25.0%
!!! CACTTTTGTTGTTTTATTGA+TGG + chr2_1:42143046-42143065 Msa0208020:intron 25.0%
! AAAAAATTGGAGATTTGAGT+GGG - chr2_1:42143097-42143116 None:intergenic 25.0%
!!! TCAAATCTCCAATTTTTTGT+TGG + chr2_1:42143099-42143118 Msa0208020:intron 25.0%
! AGAACAAATTTATGAAAAGG+GGG + chr2_1:42143203-42143222 Msa0208020:intron 25.0%
!! TCATTATTCTCGAGTATTTT+AGG + chr2_1:42143287-42143306 Msa0208020:intron 25.0%
! CATTAACAAAGATTATGAAG+AGG + chr2_1:42143539-42143558 Msa0208020:intron 25.0%
! TTTGAATTTATTGGAAGTTC+AGG - chr2_1:42143574-42143593 None:intergenic 25.0%
! TATTGTAATTGCTTGTGAAA+TGG + chr2_1:42143806-42143825 Msa0208020:intron 25.0%
!! ATTTTCAACACAAATGACAA+AGG + chr2_1:42143961-42143980 Msa0208020:intron 25.0%
!! AAATTGAAATCGATTCAGAA+GGG - chr2_1:42144200-42144219 None:intergenic 25.0%
!! TAAATTGAAATCGATTCAGA+AGG - chr2_1:42144201-42144220 None:intergenic 25.0%
! CATGCTAGAAAAATGAAAAT+CGG + chr2_1:42144444-42144463 Msa0208020:intron 25.0%
!!! TTTGGTATTTTATTTGCAGT+GGG - chr2_1:42144558-42144577 None:intergenic 25.0%
! AATACAGGAAACAAGATAAA+CGG - chr2_1:42144722-42144741 None:intergenic 25.0%
!!! TGGAAATGGATTAGAAAATA+GGG - chr2_1:42144797-42144816 None:intergenic 25.0%
!!! TTGGAAATGGATTAGAAAAT+AGG - chr2_1:42144798-42144817 None:intergenic 25.0%
! AAACAACTGCAAAAATTTCA+CGG + chr2_1:42145032-42145051 Msa0208020:CDS 25.0%
! ACAGAAGTAACTAAAACAAA+AGG - chr2_1:42145168-42145187 None:intergenic 25.0%
!! TACTTCTGTAATTTTTCCTA+AGG + chr2_1:42145179-42145198 Msa0208020:intron 25.0%
!! TAATTTTTCCTAAGGTGAAT+TGG + chr2_1:42145187-42145206 Msa0208020:intron 25.0%
!! TTTCTCTCAAATTTGAAATC+AGG - chr2_1:42145303-42145322 None:intergenic 25.0%
!! GTATTTCTTTTTGAACAACA+TGG - chr2_1:42145783-42145802 None:intergenic 25.0%
! CATTACTTTAAACCGTTTAA+GGG - chr2_1:42145867-42145886 None:intergenic 25.0%
!! CTTAAACGGTTTAAAGTAAT+GGG + chr2_1:42145866-42145885 Msa0208020:intron 25.0%
! TTCCTATCAGATATCTTTAA+AGG + chr2_1:42146351-42146370 Msa0208020:intron 25.0%
!! AACCTTTAAAGATATCTGAT+AGG - chr2_1:42146356-42146375 None:intergenic 25.0%
!! TATCAGATATCTTTAAAGGT+TGG + chr2_1:42146355-42146374 Msa0208020:intron 25.0%
!! AATCTAAAAGTTTTCACACT+TGG - chr2_1:42146624-42146643 None:intergenic 25.0%
!!! GTTTATTTTCAGGGTTATTT+TGG - chr2_1:42147124-42147143 None:intergenic 25.0%
!!! CATGCATTTAGTTTATTTTC+AGG - chr2_1:42147134-42147153 None:intergenic 25.0%
! TTCTAACTAGTATGTCATAT+AGG - chr2_1:42147374-42147393 None:intergenic 25.0%
! TTATTTATTCGCAAAACTCT+TGG - chr2_1:42147594-42147613 None:intergenic 25.0%
!!! ATTATGCTTTGTTTACTTTG+TGG - chr2_1:42147834-42147853 None:intergenic 25.0%
! TCATTATCAATGTTGTTGAA+AGG + chr2_1:42148284-42148303 Msa0208020:intron 25.0%
! CATTATCAATGTTGTTGAAA+GGG + chr2_1:42148285-42148304 Msa0208020:intron 25.0%
! ATTATCAATGTTGTTGAAAG+GGG + chr2_1:42148286-42148305 Msa0208020:intron 25.0%
!!! TTTTTTGATTGAGAGAGTTT+AGG + chr2_1:42148381-42148400 Msa0208020:intron 25.0%
!!! TTTTTGATTGAGAGAGTTTA+GGG + chr2_1:42148382-42148401 Msa0208020:intron 25.0%
! GATATTTGGACTTCAAATAA+TGG - chr2_1:42148706-42148725 None:intergenic 25.0%
! AAATGTGAACATCAGATATT+TGG - chr2_1:42148720-42148739 None:intergenic 25.0%
!!! TCAATATACAGAAAGTGTTA+GGG - chr2_1:42148773-42148792 None:intergenic 25.0%
!!! ATCAATATACAGAAAGTGTT+AGG - chr2_1:42148774-42148793 None:intergenic 25.0%
! ACAACAAAAACTCAAGTTAA+TGG + chr2_1:42148871-42148890 Msa0208020:intron 25.0%
! CAACAAAAACTCAAGTTAAT+GGG + chr2_1:42148872-42148891 Msa0208020:intron 25.0%
! TTTGATTCTCTCAAATCTTT+AGG - chr2_1:42148943-42148962 None:intergenic 25.0%
! AGTTATGTTCACTCTATAAT+TGG + chr2_1:42148967-42148986 Msa0208020:intron 25.0%
! TAGTGACAACTATAAATAGA+TGG - chr2_1:42149037-42149056 None:intergenic 25.0%
! TATTTATAGTTGTCACTATG+AGG + chr2_1:42149039-42149058 Msa0208020:intron 25.0%
!!! TTTCACATTTTGATTGATGT+AGG - chr2_1:42149251-42149270 None:intergenic 25.0%
! TGATAAATCTACTTCATGAA+TGG - chr2_1:42149441-42149460 None:intergenic 25.0%
! TATTACATTATTGAGGTATG+TGG - chr2_1:42149742-42149761 None:intergenic 25.0%
! GCATAACTATTACATTATTG+AGG - chr2_1:42149749-42149768 None:intergenic 25.0%
! AACTAAAATATACAGCAACA+AGG - chr2_1:42149777-42149796 None:intergenic 25.0%
!!! AGAATATGTTTTAATGTCAG+CGG - chr2_1:42149831-42149850 None:intergenic 25.0%
! AGATATAATCATACTCTCAA+AGG - chr2_1:42149921-42149940 None:intergenic 25.0%
!! TTGAGAGTATGATTATATCT+CGG + chr2_1:42149921-42149940 Msa0208020:intron 25.0%
!!! TCTAGTATAATCCATTTTTC+CGG - chr2_1:42150252-42150271 None:intergenic 25.0%
! TTTCTGTTATCAAACAAACT+TGG - chr2_1:42150296-42150315 None:intergenic 25.0%
! TCAATGAAGTAAAGTTTATC+TGG - chr2_1:42150503-42150522 None:intergenic 25.0%
! GATATTGTTCGTTCATATTT+GGG - chr2_1:42150730-42150749 None:intergenic 25.0%
! TGATATTGTTCGTTCATATT+TGG - chr2_1:42150731-42150750 None:intergenic 25.0%
!!! TTTATTTTGACTTTTGGGTA+TGG + chr2_1:42150996-42151015 Msa0208020:intron 25.0%
!!! TTATTTTGACTTTTGGGTAT+GGG + chr2_1:42150997-42151016 Msa0208020:intron 25.0%
! GAAAATGTCAAATTGATACT+TGG + chr2_1:42151104-42151123 Msa0208020:intron 25.0%
!! AGTATTTCAAGTGTGATTTA+AGG + chr2_1:42151459-42151478 Msa0208020:intron 25.0%
!! AGACAAATTTCAAAAAGTGT+TGG - chr2_1:42151900-42151919 None:intergenic 25.0%
! TTAATACCAATTCACAATAC+AGG + chr2_1:42152029-42152048 Msa0208020:intron 25.0%
! TCTTAAAACTTTGTATGTTG+AGG + chr2_1:42152065-42152084 Msa0208020:CDS 25.0%
! TCTTATTAAAATGATACCCA+TGG + chr2_1:42152179-42152198 Msa0208020:intron 25.0%
! AAAGAAATATCAATAGCCAT+GGG - chr2_1:42152198-42152217 None:intergenic 25.0%
! CCAAGATAATCAAATTCTAT+TGG - chr2_1:42152246-42152265 None:intergenic 25.0%
! CCAATAGAATTTGATTATCT+TGG + chr2_1:42152243-42152262 Msa0208020:CDS 25.0%
! ACATTTAACTACATGAATCA+GGG - chr2_1:42152409-42152428 None:intergenic 25.0%
! AACATTTAACTACATGAATC+AGG - chr2_1:42152410-42152429 None:intergenic 25.0%
! TGGATTACAATACAACAATA+AGG - chr2_1:42152536-42152555 None:intergenic 25.0%
! GTATTGTAATCCAGAAAATT+AGG + chr2_1:42152543-42152562 Msa0208020:three_prime_UTR 25.0%
!!! TTCAGATGACATAATTTGTT+CGG + chr2_1:42152652-42152671 Msa0208020:three_prime_UTR 25.0%
AAAGGAGAATGGTGTTTATT+CGG - chr2_1:42141616-42141635 None:intergenic 30.0%
ATGTTTGTGAGAATGAGAAA+AGG - chr2_1:42141634-42141653 None:intergenic 30.0%
!!! ACATTTCCCTTTTTTTAACC+AGG - chr2_1:42142097-42142116 None:intergenic 30.0%
! AAAGTTGAGAAAATTTCTGG+AGG + chr2_1:42142470-42142489 Msa0208020:CDS 30.0%
!! ACAAAAAGTACTAATCAAGC+TGG - chr2_1:42142573-42142592 None:intergenic 30.0%
!! TTTTTCAGTACTGAAGGTTT+CGG + chr2_1:42142704-42142723 Msa0208020:intron 30.0%
TAGTAGAAAAATAGTACCAC+AGG - chr2_1:42142927-42142946 None:intergenic 30.0%
! AAAAATTTGGGGCTTTATAG+GGG - chr2_1:42142988-42143007 None:intergenic 30.0%
! CAAAAATTTGGGGCTTTATA+GGG - chr2_1:42142989-42143008 None:intergenic 30.0%
ATACAGATTCACTCAAAATG+GGG - chr2_1:42143013-42143032 None:intergenic 30.0%
AAAAATTGGAGATTTGAGTG+GGG - chr2_1:42143096-42143115 None:intergenic 30.0%
CAAAAAATTGGAGATTTGAG+TGG - chr2_1:42143098-42143117 None:intergenic 30.0%
! TTCTGCTACTTCAAAAAGAA+GGG - chr2_1:42143315-42143334 None:intergenic 30.0%
! TTTCTGCTACTTCAAAAAGA+AGG - chr2_1:42143316-42143335 None:intergenic 30.0%
! GGTTTCTATTTTCTCGTTTT+AGG - chr2_1:42143656-42143675 None:intergenic 30.0%
CCTCTGATCAAATGAAAAAA+TGG - chr2_1:42143677-42143696 None:intergenic 30.0%
!!! CCATTTTTTCATTTGATCAG+AGG + chr2_1:42143674-42143693 Msa0208020:intron 30.0%
! GAGGAAAATATGAGTTCTAA+TGG + chr2_1:42143693-42143712 Msa0208020:intron 30.0%
!!! TTTGTTAGATTGCGCTTTTT+TGG + chr2_1:42143993-42144012 Msa0208020:intron 30.0%
TAGGGAATAGGGATAATATT+AGG + chr2_1:42144123-42144142 Msa0208020:intron 30.0%
AGGGAATAGGGATAATATTA+GGG + chr2_1:42144124-42144143 Msa0208020:intron 30.0%
GATTTCAATTTATACCCAGT+TGG + chr2_1:42144209-42144228 Msa0208020:intron 30.0%
TGTTATGAGAAAAGACTACA+AGG - chr2_1:42144323-42144342 None:intergenic 30.0%
TAGCATGAATATGATCTACA+TGG - chr2_1:42144431-42144450 None:intergenic 30.0%
!! GAAAAATGAAAATCGGTTTG+AGG + chr2_1:42144451-42144470 Msa0208020:intron 30.0%
!! CTTTGGTATTTTATTTGCAG+TGG - chr2_1:42144559-42144578 None:intergenic 30.0%
AAACTGGAAATGCAAAATAC+AGG - chr2_1:42144737-42144756 None:intergenic 30.0%
! TTGCATTTCCAGTTTTACAA+AGG + chr2_1:42144742-42144761 Msa0208020:intron 30.0%
! TGCATTTCCAGTTTTACAAA+GGG + chr2_1:42144743-42144762 Msa0208020:intron 30.0%
!! AAATGGATTAGAAAATAGGG+TGG - chr2_1:42144794-42144813 None:intergenic 30.0%
CGTCTGAATTAAGTATCATA+TGG + chr2_1:42144854-42144873 Msa0208020:intron 30.0%
! TAATTAGGTTGTCATTCTAC+AGG - chr2_1:42144946-42144965 None:intergenic 30.0%
! GTGAAATTTTTGCAGTTGTT+TGG - chr2_1:42145033-42145052 None:intergenic 30.0%
CAGATATCATTCCATAATTG+AGG - chr2_1:42145083-42145102 None:intergenic 30.0%
CTCAATTATGGAATGATATC+TGG + chr2_1:42145081-42145100 Msa0208020:CDS 30.0%
!!! ATCTGGAAGTTTTTTGAGAA+AGG + chr2_1:42145098-42145117 Msa0208020:CDS 30.0%
AGATGAATTCTAAGCCAATT+AGG - chr2_1:42145384-42145403 None:intergenic 30.0%
! TAATGTCCCCATATTTTTCT+TGG + chr2_1:42145407-42145426 Msa0208020:intron 30.0%
TGACAAAAGAAAATTGCACA+AGG - chr2_1:42145519-42145538 None:intergenic 30.0%
!! CGATGGTGGAAAAATAAAAA+AGG + chr2_1:42145626-42145645 Msa0208020:intron 30.0%
ATTACAAAACCACCCTTAAA+CGG + chr2_1:42145852-42145871 Msa0208020:intron 30.0%
CCATTACTTTAAACCGTTTA+AGG - chr2_1:42145868-42145887 None:intergenic 30.0%
! CCTTAAACGGTTTAAAGTAA+TGG + chr2_1:42145865-42145884 Msa0208020:intron 30.0%
AAGTTTCTCATGAGTTGTTT+AGG - chr2_1:42146154-42146173 None:intergenic 30.0%
GAAAAAGTTAGATAACAAGG+TGG - chr2_1:42146298-42146317 None:intergenic 30.0%
TTACAAGACAGTTTCATTCA+AGG + chr2_1:42146464-42146483 Msa0208020:CDS 30.0%
ATAAGAAAAGAATAAGCACC+TGG - chr2_1:42146515-42146534 None:intergenic 30.0%
!! GATCACTTTTGCTAAACATT+AGG + chr2_1:42146684-42146703 Msa0208020:intron 30.0%
! TTTTGCTAAACATTAGGACT+GGG + chr2_1:42146690-42146709 Msa0208020:intron 30.0%
TTCTAACTAGTATGTCATAG+AGG + chr2_1:42146806-42146825 Msa0208020:intron 30.0%
! AAATTAAGGTGGTGTCAAAA+TGG + chr2_1:42146951-42146970 Msa0208020:intron 30.0%
! AATTAAGGTGGTGTCAAAAT+GGG + chr2_1:42146952-42146971 Msa0208020:intron 30.0%
AAATAGGTTAAGAGAGAGAT+TGG + chr2_1:42147070-42147089 Msa0208020:intron 30.0%
TAACAAAATTAAGGTGGTGT+CGG - chr2_1:42147234-42147253 None:intergenic 30.0%
!! TGCTCTTTAGAATGAATTCA+AGG - chr2_1:42147428-42147447 None:intergenic 30.0%
CATAGTAGGAACAAACTTAT+GGG - chr2_1:42147467-42147486 None:intergenic 30.0%
ACATAGTAGGAACAAACTTA+TGG - chr2_1:42147468-42147487 None:intergenic 30.0%
!! TGAATTGATTTGAGCTTCTT+TGG + chr2_1:42148442-42148461 Msa0208020:intron 30.0%
!! TAGAATTTCTAGCTGGTAAT+TGG - chr2_1:42148564-42148583 None:intergenic 30.0%
ATGTAAATTCTCGAGCTTAA+TGG - chr2_1:42148805-42148824 None:intergenic 30.0%
! AATCTTTAGGTTAGGGATTT+AGG - chr2_1:42148930-42148949 None:intergenic 30.0%
! TCTCTCAAATCTTTAGGTTA+GGG - chr2_1:42148937-42148956 None:intergenic 30.0%
! TTCTCTCAAATCTTTAGGTT+AGG - chr2_1:42148938-42148957 None:intergenic 30.0%
TGACAACTATAAATAGATGG+TGG - chr2_1:42149034-42149053 None:intergenic 30.0%
AAATGTGAAAGTTTGATTGC+AGG + chr2_1:42149261-42149280 Msa0208020:intron 30.0%
! CATGACTCTTTCTTCTTTTT+GGG - chr2_1:42149348-42149367 None:intergenic 30.0%
! ACATGACTCTTTCTTCTTTT+TGG - chr2_1:42149349-42149368 None:intergenic 30.0%
GGTAGTTTATGAATAAGCTT+TGG + chr2_1:42149527-42149546 Msa0208020:intron 30.0%
!! CTTTAAAATGGATGAAGTAG+TGG + chr2_1:42149556-42149575 Msa0208020:intron 30.0%
TAAAATATACAGCAACAAGG+TGG - chr2_1:42149774-42149793 None:intergenic 30.0%
GTGAGCAAGTTAAAATGTAA+TGG + chr2_1:42150081-42150100 Msa0208020:intron 30.0%
TAACTCGTCAACATTGAAAA+TGG - chr2_1:42150221-42150240 None:intergenic 30.0%
TTAACTTATAGCCGGAAAAA+TGG + chr2_1:42150238-42150257 Msa0208020:intron 30.0%
GCAAGCATAAATAACTTACA+AGG - chr2_1:42150609-42150628 None:intergenic 30.0%
ACGAACAATATCATTTCTTC+AGG + chr2_1:42150738-42150757 Msa0208020:CDS 30.0%
AGGTAATAATCACAGTGAAA+GGG + chr2_1:42150789-42150808 Msa0208020:intron 30.0%
TCTGTCATGCATGTTTATTA+AGG + chr2_1:42150916-42150935 Msa0208020:intron 30.0%
TACAAATACTAACACTGAAG+TGG - chr2_1:42150967-42150986 None:intergenic 30.0%
TGATACTTGGGAAATTTACT+TGG + chr2_1:42151117-42151136 Msa0208020:intron 30.0%
! AAGCTTTTACGATTCAAATC+AGG - chr2_1:42151288-42151307 None:intergenic 30.0%
! TGTGTACTTTTAATCGATGA+AGG - chr2_1:42151332-42151351 None:intergenic 30.0%
! ATCTTGCGATTTAGTGATTT+TGG + chr2_1:42151357-42151376 Msa0208020:intron 30.0%
! ATTTTTGTAAACTCGGTATC+TGG + chr2_1:42151541-42151560 Msa0208020:intron 30.0%
!! CAAAAAGTGTTGGAATAAAG+CGG - chr2_1:42151890-42151909 None:intergenic 30.0%
ATAATTTACATGTCCTCAAG+TGG - chr2_1:42151942-42151961 None:intergenic 30.0%
CAAAGAAATATCAATAGCCA+TGG - chr2_1:42152199-42152218 None:intergenic 30.0%
TCTACTCATTCCTTTCTAAA+AGG - chr2_1:42152338-42152357 None:intergenic 30.0%
AGATAGTTTCTACTTCATCA+AGG + chr2_1:42152357-42152376 Msa0208020:three_prime_UTR 30.0%
! GATTTGAAAGCCTAATTTTC+TGG - chr2_1:42152556-42152575 None:intergenic 30.0%
CATTCTTTCTAGATGTATTG+TGG + chr2_1:42152583-42152602 Msa0208020:three_prime_UTR 30.0%
CCTATTCTGTCTTTCGAATT+GGG - chr2_1:42141588-42141607 None:intergenic 35.0%
TCCTATTCTGTCTTTCGAAT+TGG - chr2_1:42141589-42141608 None:intergenic 35.0%
TGAGAATGAGAAAAGGAGAA+TGG - chr2_1:42141627-42141646 None:intergenic 35.0%
AATCGATGAGAAAGATTCAG+AGG - chr2_1:42141727-42141746 None:intergenic 35.0%
GTGCAGGAAGAAAAGAAAAA+GGG - chr2_1:42141929-42141948 None:intergenic 35.0%
AGTGCAGGAAGAAAAGAAAA+AGG - chr2_1:42141930-42141949 None:intergenic 35.0%
! AAATTTGCAAAAGGAAGTGC+AGG - chr2_1:42141945-42141964 None:intergenic 35.0%
! TGAATGCAGTAATTTGTGCA+AGG + chr2_1:42142406-42142425 Msa0208020:intron 35.0%
! AATCAAGCTGGCAATTTTTC+TGG - chr2_1:42142561-42142580 None:intergenic 35.0%
! ATCAACTAGTTTGAGGTCAT+TGG - chr2_1:42142664-42142683 None:intergenic 35.0%
TGAAGGTTTCGGTTAAACAA+GGG + chr2_1:42142715-42142734 Msa0208020:CDS 35.0%
AAAGCGATCAATGATATGCT+CGG - chr2_1:42142787-42142806 None:intergenic 35.0%
! AAAATTTGGGGCTTTATAGG+GGG - chr2_1:42142987-42143006 None:intergenic 35.0%
! CCAAAAATTTGGGGCTTTAT+AGG - chr2_1:42142990-42143009 None:intergenic 35.0%
! CCTATAAAGCCCCAAATTTT+TGG + chr2_1:42142987-42143006 Msa0208020:intron 35.0%
AAAATGGGGCCAAAAATTTG+GGG - chr2_1:42142999-42143018 None:intergenic 35.0%
CAAAATGGGGCCAAAAATTT+GGG - chr2_1:42143000-42143019 None:intergenic 35.0%
TCAAAATGGGGCCAAAAATT+TGG - chr2_1:42143001-42143020 None:intergenic 35.0%
! TCTGCTACTTCAAAAAGAAG+GGG - chr2_1:42143314-42143333 None:intergenic 35.0%
TTACCATGCTTCTAAGTTAG+AGG + chr2_1:42143351-42143370 Msa0208020:intron 35.0%
TTGCTTGTGAAATGGTGTTT+AGG + chr2_1:42143814-42143833 Msa0208020:intron 35.0%
! TGGCTTGGAATATTTGGAAA+TGG + chr2_1:42143875-42143894 Msa0208020:CDS 35.0%
GCATACGTACAATGCAATAT+TGG - chr2_1:42144074-42144093 None:intergenic 35.0%
TTACTGAATGCAGCATATCT+AGG + chr2_1:42144104-42144123 Msa0208020:intron 35.0%
TACTGAATGCAGCATATCTA+GGG + chr2_1:42144105-42144124 Msa0208020:intron 35.0%
GGGAATAGGGATAATATTAG+GGG + chr2_1:42144125-42144144 Msa0208020:intron 35.0%
AGGAATTTACTTCAGGACTA+TGG - chr2_1:42144259-42144278 None:intergenic 35.0%
TCCTGAAGTAAATTCCTTAC+TGG + chr2_1:42144262-42144281 Msa0208020:intron 35.0%
TCCAGTAAGGAATTTACTTC+AGG - chr2_1:42144266-42144285 None:intergenic 35.0%
TGAGAAAAGACTACAAGGTT+GGG - chr2_1:42144318-42144337 None:intergenic 35.0%
ATGAGAAAAGACTACAAGGT+TGG - chr2_1:42144319-42144338 None:intergenic 35.0%
! ACAGATGAATTGAAGAGCAT+TGG + chr2_1:42144526-42144545 Msa0208020:intron 35.0%
TTTCAACGAACCACTTTCTT+TGG - chr2_1:42144576-42144595 None:intergenic 35.0%
GAAAGTGGTTCGTTGAAATT+TGG + chr2_1:42144578-42144597 Msa0208020:intron 35.0%
GTTGAAATTTGGATGAGACT+CGG + chr2_1:42144589-42144608 Msa0208020:intron 35.0%
TATAACGTTGTCATGCATTG+AGG + chr2_1:42144625-42144644 Msa0208020:intron 35.0%
! TGAGTAGGATGGAATAGTTT+TGG + chr2_1:42144669-42144688 Msa0208020:intron 35.0%
!! GCATTCAGGAAGCATTAATT+AGG - chr2_1:42144961-42144980 None:intergenic 35.0%
! TTGCAGTTGTTTGGCTATTT+TGG - chr2_1:42145024-42145043 None:intergenic 35.0%
ACACAAATCCAATTCACCTT+AGG - chr2_1:42145198-42145217 None:intergenic 35.0%
CTGAAGGGAAGCTAAAAATT+TGG - chr2_1:42145256-42145275 None:intergenic 35.0%
AAAATTGAGGCAAAGCTGAA+GGG - chr2_1:42145271-42145290 None:intergenic 35.0%
TAAAATTGAGGCAAAGCTGA+AGG - chr2_1:42145272-42145291 None:intergenic 35.0%
AGGATTTGATATCCTATGTG+AGG + chr2_1:42145340-42145359 Msa0208020:intron 35.0%
GACCTTCCAAGAAAAATATG+GGG - chr2_1:42145416-42145435 None:intergenic 35.0%
GGACCTTCCAAGAAAAATAT+GGG - chr2_1:42145417-42145436 None:intergenic 35.0%
AGGACCTTCCAAGAAAAATA+TGG - chr2_1:42145418-42145437 None:intergenic 35.0%
GAGCAAGAATAACAAATGCA+AGG - chr2_1:42145438-42145457 None:intergenic 35.0%
ATACTGATCAAGTACTTTGC+AGG - chr2_1:42145467-42145486 None:intergenic 35.0%
AATGATCTCTGTTGTCAAAG+CGG + chr2_1:42145650-42145669 Msa0208020:intron 35.0%
TACTTTAAACCGTTTAAGGG+TGG - chr2_1:42145864-42145883 None:intergenic 35.0%
ATTTCCTCTGTTGTCAATAG+CGG - chr2_1:42146068-42146087 None:intergenic 35.0%
TCAATGGGGTTATAAAAGAC+AGG - chr2_1:42146203-42146222 None:intergenic 35.0%
! CATTGATAGTCATGTCAATG+GGG - chr2_1:42146217-42146236 None:intergenic 35.0%
! GCATTGATAGTCATGTCAAT+GGG - chr2_1:42146218-42146237 None:intergenic 35.0%
ATCTAAATCATCCATTCACG+TGG - chr2_1:42146240-42146259 None:intergenic 35.0%
CACTAATTGTCATGTGAATG+GGG - chr2_1:42146275-42146294 None:intergenic 35.0%
GCACTAATTGTCATGTGAAT+GGG - chr2_1:42146276-42146295 None:intergenic 35.0%
ATATCTGATAGGAACCTGAA+AGG - chr2_1:42146345-42146364 None:intergenic 35.0%
TGATGAAATTTATGAGCTCC+AGG + chr2_1:42146494-42146513 Msa0208020:CDS 35.0%
!! AGTTTTCACACTTGGTGAAT+AGG - chr2_1:42146616-42146635 None:intergenic 35.0%
! CTTTTGCTAAACATTAGGAC+TGG + chr2_1:42146689-42146708 Msa0208020:intron 35.0%
TTTGCTAAACATTAGGACTG+GGG + chr2_1:42146691-42146710 Msa0208020:intron 35.0%
! CTTGGTAATTCCATTCATCA+GGG - chr2_1:42146732-42146751 None:intergenic 35.0%
! ACTTGGTAATTCCATTCATC+AGG - chr2_1:42146733-42146752 None:intergenic 35.0%
CTATCCTTGTCTTCATTCTA+AGG - chr2_1:42146759-42146778 None:intergenic 35.0%
GCGTAAATCTTTCTTTGTAC+AGG - chr2_1:42146837-42146856 None:intergenic 35.0%
ACAACTGGATTTGATTGAGA+AGG - chr2_1:42147030-42147049 None:intergenic 35.0%
! GATGGCATTGAATGTTGTAA+TGG + chr2_1:42147098-42147117 Msa0208020:intron 35.0%
AGACATGCACATAATTGAGA+AGG + chr2_1:42147155-42147174 Msa0208020:intron 35.0%
AACAAAATTAAGGTGGTGTC+GGG - chr2_1:42147233-42147252 None:intergenic 35.0%
GTGCAAATCTTTCTTTGTAC+AGG + chr2_1:42147341-42147360 Msa0208020:intron 35.0%
!! GCTAAAAAATGGTGTCATGA+GGG - chr2_1:42147703-42147722 None:intergenic 35.0%
!! TGCTAAAAAATGGTGTCATG+AGG - chr2_1:42147704-42147723 None:intergenic 35.0%
AAATAGGCTACAAATAGTCG+TGG - chr2_1:42147871-42147890 None:intergenic 35.0%
AAACTACTTGTCGCTGATAT+AGG - chr2_1:42148339-42148358 None:intergenic 35.0%
TATATCAGCGACAAGTAGTT+TGG + chr2_1:42148338-42148357 Msa0208020:intron 35.0%
TTTGAGCTTCTTTGGCATAA+TGG + chr2_1:42148450-42148469 Msa0208020:intron 35.0%
!! ATCAGTCTAGAATTTCTAGC+TGG - chr2_1:42148571-42148590 None:intergenic 35.0%
TTCCTAGGCAATCAATCAAT+AGG + chr2_1:42148848-42148867 Msa0208020:intron 35.0%
TCAATCTGAACTTTCTTTCC+CGG - chr2_1:42148903-42148922 None:intergenic 35.0%
TTTCTGTGCATGTAGACATA+AGG - chr2_1:42149150-42149169 None:intergenic 35.0%
AAGACGAAACTGGAAAAGAA+GGG - chr2_1:42149501-42149520 None:intergenic 35.0%
AAAGACGAAACTGGAAAAGA+AGG - chr2_1:42149502-42149521 None:intergenic 35.0%
CAATAACATCAACACAGTCT+AGG - chr2_1:42150000-42150019 None:intergenic 35.0%
GAGTACAAAAGTCACCTTAA+AGG + chr2_1:42150167-42150186 Msa0208020:intron 35.0%
ACAAAAGTCACCTTAAAGGT+AGG + chr2_1:42150171-42150190 Msa0208020:intron 35.0%
CAAAAGTCACCTTAAAGGTA+GGG + chr2_1:42150172-42150191 Msa0208020:intron 35.0%
TTGACGAGTTAACTTATAGC+CGG + chr2_1:42150230-42150249 Msa0208020:intron 35.0%
!! ACAAACACACTTCTGGAATA+TGG + chr2_1:42150364-42150383 Msa0208020:intron 35.0%
!! CAAACACACTTCTGGAATAT+GGG + chr2_1:42150365-42150384 Msa0208020:intron 35.0%
ATTCTCATGTCAAGAGAGAA+TGG + chr2_1:42150413-42150432 Msa0208020:intron 35.0%
TATGCATCATACAACTACAG+AGG + chr2_1:42150530-42150549 Msa0208020:CDS 35.0%
AATCACTTTGCAGAATATGC+TGG + chr2_1:42150566-42150585 Msa0208020:CDS 35.0%
!! CTTGCTTTTCTTGCTTTACT+CGG + chr2_1:42150624-42150643 Msa0208020:intron 35.0%
ACTGTGATTATTACCTCTTG+AGG - chr2_1:42150785-42150804 None:intergenic 35.0%
GAGGTAATAATCACAGTGAA+AGG + chr2_1:42150788-42150807 Msa0208020:intron 35.0%
! TTTACGGATGCTTGATAATC+TGG - chr2_1:42150850-42150869 None:intergenic 35.0%
! ACTATGTGGATCTCGTTTTA+CGG - chr2_1:42150866-42150885 None:intergenic 35.0%
TCCACATAGTCTATCAACTA+TGG + chr2_1:42150876-42150895 Msa0208020:intron 35.0%
GACAGAAAAGATGATGATCA+TGG - chr2_1:42150902-42150921 None:intergenic 35.0%
TCAGGGATTAATCACTGTAT+TGG + chr2_1:42151072-42151091 Msa0208020:intron 35.0%
! GATTAATCACTGTATTGGTC+AGG + chr2_1:42151077-42151096 Msa0208020:intron 35.0%
TAACAAAATATCACCACCAC+TGG - chr2_1:42151143-42151162 None:intergenic 35.0%
! TATTTTGTTACTCCTAGCCA+TGG + chr2_1:42151153-42151172 Msa0208020:intron 35.0%
AATCGGGATTGTAATTACCA+TGG - chr2_1:42151173-42151192 None:intergenic 35.0%
CCACCCTATTCTACAAAAAT+AGG - chr2_1:42151262-42151281 None:intergenic 35.0%
!!! CCTATTTTTGTAGAATAGGG+TGG + chr2_1:42151259-42151278 Msa0208020:intron 35.0%
! CATGAGAGTTTGAAGTCATT+TGG - chr2_1:42151417-42151436 None:intergenic 35.0%
GATGTTACGCAAAATCAGAA+AGG - chr2_1:42151767-42151786 None:intergenic 35.0%
TGAGGTAAATACATATGCAC+TGG + chr2_1:42152083-42152102 Msa0208020:CDS 35.0%
! TTTTGTACTCGTTGTATCGA+AGG - chr2_1:42152278-42152297 None:intergenic 35.0%
TTCGATACAACGAGTACAAA+AGG + chr2_1:42152277-42152296 Msa0208020:CDS 35.0%
GAAAGAAAAGCTTGTATCGA+TGG + chr2_1:42152302-42152321 Msa0208020:CDS 35.0%
! CTCATTCCTTTCTAAAAGGT+AGG - chr2_1:42152334-42152353 None:intergenic 35.0%
ACTACGATCAAGGCAAATTT+AGG + chr2_1:42152486-42152505 Msa0208020:three_prime_UTR 35.0%
! AGGACTAGTGATCGTATCAT+TGG + chr2_1:42141551-42141570 Msa0208020:five_prime_UTR 40.0%
ATTCTGTCTTTCGAATTGGG+CGG - chr2_1:42141585-42141604 None:intergenic 40.0%
CCCAATTCGAAAGACAGAAT+AGG + chr2_1:42141585-42141604 Msa0208020:five_prime_UTR 40.0%
TGGGTGGAAAAGTTAAGATC+TGG + chr2_1:42141769-42141788 Msa0208020:CDS 40.0%
! AGCTTGTTCTGCGATTTCAA+CGG - chr2_1:42141799-42141818 None:intergenic 40.0%
TTGAAATCGCAGAACAAGCT+CGG + chr2_1:42141799-42141818 Msa0208020:CDS 40.0%
AAGGGAAAGAGAAGGATCAA+TGG - chr2_1:42141862-42141881 None:intergenic 40.0%
ATTTGAGGAAGGGAAAGAGA+AGG - chr2_1:42141870-42141889 None:intergenic 40.0%
!! AAGAGGTGTCATTTGAGGAA+GGG - chr2_1:42141880-42141899 None:intergenic 40.0%
!! ATGACAAGAGGTGTCATTTG+AGG - chr2_1:42141885-42141904 None:intergenic 40.0%
AGAGTTACTGACATGACAAG+AGG - chr2_1:42141897-42141916 None:intergenic 40.0%
TGATAACATGACTTTCTCCG+AGG + chr2_1:42142020-42142039 Msa0208020:intron 40.0%
ATTCCTCGAGTCGTCAATTT+GGG + chr2_1:42142059-42142078 Msa0208020:intron 40.0%
!!! CCCTTTTTTTAACCAGGACT+GGG - chr2_1:42142091-42142110 None:intergenic 40.0%
CCCAGTCCTGGTTAAAAAAA+GGG + chr2_1:42142088-42142107 Msa0208020:intron 40.0%
!!! TCCCTTTTTTTAACCAGGAC+TGG - chr2_1:42142092-42142111 None:intergenic 40.0%
TAAGGTCTTTAACCAATGCC+CGG - chr2_1:42142131-42142150 None:intergenic 40.0%
! CTTGAGAATTAGTCTCGTAG+CGG + chr2_1:42142177-42142196 Msa0208020:intron 40.0%
TTCAAGACCTGGTCAAGTTT+AGG + chr2_1:42142434-42142453 Msa0208020:CDS 40.0%
AGAATCACCTAAACTTGACC+AGG - chr2_1:42142444-42142463 None:intergenic 40.0%
CTGAAGGTTTCGGTTAAACA+AGG + chr2_1:42142714-42142733 Msa0208020:CDS 40.0%
GAAGGTTTCGGTTAAACAAG+GGG + chr2_1:42142716-42142735 Msa0208020:CDS 40.0%
!! TCAATGATATGCTCGGTGTT+GGG - chr2_1:42142780-42142799 None:intergenic 40.0%
!! ATCAATGATATGCTCGGTGT+TGG - chr2_1:42142781-42142800 None:intergenic 40.0%
!!! GATTTTGTTTCTGTTGCCTG+TGG + chr2_1:42142908-42142927 Msa0208020:intron 40.0%
! TAGGGGGGCTTTTCAATATA+GGG - chr2_1:42142971-42142990 None:intergenic 40.0%
! ATAGGGGGGCTTTTCAATAT+AGG - chr2_1:42142972-42142991 None:intergenic 40.0%
! AAATTTGGGGCTTTATAGGG+GGG - chr2_1:42142986-42143005 None:intergenic 40.0%
AAACAACAAAAGTGGGGCTA+GGG - chr2_1:42143040-42143059 None:intergenic 40.0%
AAAACAACAAAAGTGGGGCT+AGG - chr2_1:42143041-42143060 None:intergenic 40.0%
! TTTATTGATGGGCCCTATTG+AGG + chr2_1:42143058-42143077 Msa0208020:intron 40.0%
! TTTGGGGCTTATGGAAAAGA+GGG + chr2_1:42143263-42143282 Msa0208020:intron 40.0%
! CTGCTACTTCAAAAAGAAGG+GGG - chr2_1:42143313-42143332 None:intergenic 40.0%
CATCCTCTAACTTAGAAGCA+TGG - chr2_1:42143357-42143376 None:intergenic 40.0%
TCTTGAACTAAGTCTTGCAG+TGG + chr2_1:42143731-42143750 Msa0208020:intron 40.0%
CTTGAACTAAGTCTTGCAGT+GGG + chr2_1:42143732-42143751 Msa0208020:intron 40.0%
TGCAGCAGTGATGTATTTGA+TGG - chr2_1:42143840-42143859 None:intergenic 40.0%
ATCAAATACATCACTGCTGC+AGG + chr2_1:42143839-42143858 Msa0208020:CDS 40.0%
! GCTAAGTGGCTTGGAATATT+TGG + chr2_1:42143869-42143888 Msa0208020:CDS 40.0%
ATGCAGCATATCTAGGGAAT+AGG + chr2_1:42144111-42144130 Msa0208020:intron 40.0%
TGCAGCATATCTAGGGAATA+GGG + chr2_1:42144112-42144131 Msa0208020:intron 40.0%
ACTGCTCACTAGATATGTAC+CGG + chr2_1:42144169-42144188 Msa0208020:intron 40.0%
!! TCGATTCAGAAGGGTATTTC+CGG - chr2_1:42144191-42144210 None:intergenic 40.0%
!! ATTTATACCCAGTTGGTGAC+TGG + chr2_1:42144216-42144235 Msa0208020:intron 40.0%
TTAAGATCCAGTCACCAACT+GGG - chr2_1:42144226-42144245 None:intergenic 40.0%
GAGAAAAGACTACAAGGTTG+GGG - chr2_1:42144317-42144336 None:intergenic 40.0%
!! AAAATCGGTTTGAGGAGTAG+TGG + chr2_1:42144459-42144478 Msa0208020:intron 40.0%
!! AAATCGGTTTGAGGAGTAGT+GGG + chr2_1:42144460-42144479 Msa0208020:intron 40.0%
AAATTTGGATGAGACTCGGA+AGG + chr2_1:42144593-42144612 Msa0208020:intron 40.0%
AAGGAAGGCAAGAATTGAGT+AGG + chr2_1:42144654-42144673 Msa0208020:intron 40.0%
AAGGCAAGAATTGAGTAGGA+TGG + chr2_1:42144658-42144677 Msa0208020:intron 40.0%
CAAGATAAACGGAATTCTGC+AGG - chr2_1:42144711-42144730 None:intergenic 40.0%
AAAGCAGCCCTTTGTAAAAC+TGG - chr2_1:42144753-42144772 None:intergenic 40.0%
TGTGTGTGTGAACTTGGAAA+TGG - chr2_1:42144811-42144830 None:intergenic 40.0%
TGTGTATGTGTGTGTGAACT+TGG - chr2_1:42144817-42144836 None:intergenic 40.0%
AGATATGCGAGAACCAAAAC+TGG + chr2_1:42144995-42145014 Msa0208020:intron 40.0%
!!! GCTATTTTGGCAACCAGTTT+TGG - chr2_1:42145011-42145030 None:intergenic 40.0%
ACTGCAAAAATTTCACGGTG+TGG + chr2_1:42145037-42145056 Msa0208020:CDS 40.0%
!! GCTCTAAGGAACCTCAATTA+TGG + chr2_1:42145069-42145088 Msa0208020:CDS 40.0%
! GATTTGTGTCGATGAGTTGT+AGG + chr2_1:42145209-42145228 Msa0208020:intron 40.0%
GGATTTCAGCTATGTTTCGT+AGG + chr2_1:42145230-42145249 Msa0208020:intron 40.0%
!! CAGGAGAAGTGCTAAAATTG+AGG - chr2_1:42145284-42145303 None:intergenic 40.0%
ATCCTATGTGAGGATTCTCT+TGG + chr2_1:42145350-42145369 Msa0208020:intron 40.0%
TCCTATGTGAGGATTCTCTT+GGG + chr2_1:42145351-42145370 Msa0208020:intron 40.0%
! GTCCCCATATTTTTCTTGGA+AGG + chr2_1:42145411-42145430 Msa0208020:intron 40.0%
TCAAGTACTTTGCAGGACTA+GGG - chr2_1:42145460-42145479 None:intergenic 40.0%
ATCAAGTACTTTGCAGGACT+AGG - chr2_1:42145461-42145480 None:intergenic 40.0%
TTTAGGAGAGAAGTTCTCTC+TGG - chr2_1:42146137-42146156 None:intergenic 40.0%
TAAAAGACAGGAAAGCCTAG+AGG - chr2_1:42146191-42146210 None:intergenic 40.0%
!! GGCATTGATAGTCATGTCAA+TGG - chr2_1:42146219-42146238 None:intergenic 40.0%
TGTGAATGGGGAGAAGAAAA+GGG - chr2_1:42146263-42146282 None:intergenic 40.0%
ATGTGAATGGGGAGAAGAAA+AGG - chr2_1:42146264-42146283 None:intergenic 40.0%
GGCACTAATTGTCATGTGAA+TGG - chr2_1:42146277-42146296 None:intergenic 40.0%
! TGAAAGGTCAAAGTGGATTC+GGG - chr2_1:42146329-42146348 None:intergenic 40.0%
! CTGAAAGGTCAAAGTGGATT+CGG - chr2_1:42146330-42146349 None:intergenic 40.0%
!! GCAGCATCTGTTCTAGAATT+TGG + chr2_1:42146420-42146439 Msa0208020:intron 40.0%
! TCACACTTGGTGAATAGGAT+TGG - chr2_1:42146611-42146630 None:intergenic 40.0%
ACAGAAAGTTCCCTGATGAA+TGG + chr2_1:42146719-42146738 Msa0208020:intron 40.0%
!! TCTTCATTCTAAGGAGCACT+TGG - chr2_1:42146750-42146769 None:intergenic 40.0%
TGCTCCTTAGAATGAAGACA+AGG + chr2_1:42146752-42146771 Msa0208020:intron 40.0%
CCTATTTGCACTATGACTGT+AGG - chr2_1:42147057-42147076 None:intergenic 40.0%
CCTACAGTCATAGTGCAAAT+AGG + chr2_1:42147054-42147073 Msa0208020:intron 40.0%
ACTTTGTGGTGTCTATGTGT+TGG - chr2_1:42147820-42147839 None:intergenic 40.0%
ATCAATGTTGTTGAAAGGGG+TGG + chr2_1:42148289-42148308 Msa0208020:intron 40.0%
!!! GCATAATGGTTTTGACAACG+TGG + chr2_1:42148464-42148483 Msa0208020:intron 40.0%
CATCCACATTACTTGTAGGA+AGG - chr2_1:42148510-42148529 None:intergenic 40.0%
GACTCATCCACATTACTTGT+AGG - chr2_1:42148514-42148533 None:intergenic 40.0%
!!! AGTCGAGTTTTGTTCCTACT+AGG + chr2_1:42148530-42148549 Msa0208020:intron 40.0%
!! GTTTTGTTCCTACTAGGTTG+TGG + chr2_1:42148536-42148555 Msa0208020:intron 40.0%
AATTGGAACCACAACCTAGT+AGG - chr2_1:42148547-42148566 None:intergenic 40.0%
AACATAAAACTTGTGACCGC+TGG + chr2_1:42148638-42148657 Msa0208020:intron 40.0%
! GTCCTATTGATTGATTGCCT+AGG - chr2_1:42148853-42148872 None:intergenic 40.0%
CTCAAGTTAATGGGATGAAC+CGG + chr2_1:42148881-42148900 Msa0208020:intron 40.0%
TCAAGTTAATGGGATGAACC+GGG + chr2_1:42148882-42148901 Msa0208020:intron 40.0%
TCCTTTGAATTCCTACCTCA+AGG + chr2_1:42148991-42149010 Msa0208020:intron 40.0%
ACCTTGAGGTAGGAATTCAA+AGG - chr2_1:42148995-42149014 None:intergenic 40.0%
AATACTCACAACCTTGAGGT+AGG - chr2_1:42149005-42149024 None:intergenic 40.0%
AAAGGTTTCTGTGTCAACAC+TGG + chr2_1:42149181-42149200 Msa0208020:intron 40.0%
ATTTATCATGCCCAAGTGTC+AGG + chr2_1:42149453-42149472 Msa0208020:intron 40.0%
AGACGAAACTGGAAAAGAAG+GGG - chr2_1:42149500-42149519 None:intergenic 40.0%
TTCCAGTTTCGTCTTTGTGA+TGG + chr2_1:42149506-42149525 Msa0208020:intron 40.0%
TACCATCACAAAGACGAAAC+TGG - chr2_1:42149511-42149530 None:intergenic 40.0%
!! TCTCACAATGACTTGCTTTC+TGG + chr2_1:42149686-42149705 Msa0208020:CDS 40.0%
TCTAGGAAGAAGAATGGCAA+AGG - chr2_1:42149983-42150002 None:intergenic 40.0%
ACACAGTCTAGGAAGAAGAA+TGG - chr2_1:42149989-42150008 None:intergenic 40.0%
ACTAAATGAGTCAGCACATG+CGG + chr2_1:42150037-42150056 Msa0208020:intron 40.0%
TAAGGAGACAAACACACTTC+TGG + chr2_1:42150357-42150376 Msa0208020:intron 40.0%
!! ACTTCTGGAATATGGGCATT+TGG + chr2_1:42150372-42150391 Msa0208020:intron 40.0%
AACTACAGAGGCTATGACAT+AGG + chr2_1:42150542-42150561 Msa0208020:CDS 40.0%
ACTACAGAGGCTATGACATA+GGG + chr2_1:42150543-42150562 Msa0208020:CDS 40.0%
!! GCCATAGTTGATAGACTATG+TGG - chr2_1:42150880-42150899 None:intergenic 40.0%
!!! TTTTGACTTTTGGGTATGGG+AGG + chr2_1:42151000-42151019 Msa0208020:intron 40.0%
!! TTTGACTTTTGGGTATGGGA+GGG + chr2_1:42151001-42151020 Msa0208020:intron 40.0%
ACAAAATTCACTGACCTGTC+AGG + chr2_1:42151054-42151073 Msa0208020:intron 40.0%
CAAAATTCACTGACCTGTCA+GGG + chr2_1:42151055-42151074 Msa0208020:intron 40.0%
TACAGTGATTAATCCCTGAC+AGG - chr2_1:42151071-42151090 None:intergenic 40.0%
! ATCACTGTATTGGTCAGGAA+TGG + chr2_1:42151082-42151101 Msa0208020:intron 40.0%
GGATTGTAATTACCATGGCT+AGG - chr2_1:42151168-42151187 None:intergenic 40.0%
TGTGTGCTCTTAATCGTTGA+GGG - chr2_1:42151233-42151252 None:intergenic 40.0%
TTGTGTGCTCTTAATCGTTG+AGG - chr2_1:42151234-42151253 None:intergenic 40.0%
TCAAGGAACGACTAATCTGA+GGG + chr2_1:42151565-42151584 Msa0208020:intron 40.0%
!! AGCTTTGCTCTGGCTTTAAA+CGG - chr2_1:42151620-42151639 None:intergenic 40.0%
GGAATCAAAACTGAGACCTT+GGG + chr2_1:42151675-42151694 Msa0208020:intron 40.0%
CAGACACCTGTATTGTGAAT+TGG - chr2_1:42152038-42152057 None:intergenic 40.0%
!! CGCTATCCTACCTTTTAGAA+AGG + chr2_1:42152325-42152344 Msa0208020:CDS 40.0%
CGATGAGAAAGATTCAGAGG+TGG - chr2_1:42141724-42141743 None:intergenic 45.0%
GCTTGTTCTGCGATTTCAAC+GGG - chr2_1:42141798-42141817 None:intergenic 45.0%
GGATCAATGGAGAGAAGAGA+AGG - chr2_1:42141849-42141868 None:intergenic 45.0%
!! CAAGAGGTGTCATTTGAGGA+AGG - chr2_1:42141881-42141900 None:intergenic 45.0%
TACCCGAAAATGAACCTGCA+CGG + chr2_1:42141985-42142004 Msa0208020:intron 45.0%
! ACACCGTGCAGGTTCATTTT+CGG - chr2_1:42141991-42142010 None:intergenic 45.0%
AAATGAACCTGCACGGTGTT+AGG + chr2_1:42141992-42142011 Msa0208020:intron 45.0%
GATTCCTCGAGTCGTCAATT+TGG + chr2_1:42142058-42142077 Msa0208020:intron 45.0%
GCCCAGTCCTGGTTAAAAAA+AGG + chr2_1:42142087-42142106 Msa0208020:intron 45.0%
AAGGTCTTTAACCAATGCCC+GGG - chr2_1:42142130-42142149 None:intergenic 45.0%
AATCCTAGCTTAGGCCACTT+GGG - chr2_1:42142204-42142223 None:intergenic 45.0%
AAATCCTAGCTTAGGCCACT+TGG - chr2_1:42142205-42142224 None:intergenic 45.0%
GACACCAGAAATCCTAGCTT+AGG - chr2_1:42142213-42142232 None:intergenic 45.0%
!! CAATGATATGCTCGGTGTTG+GGG - chr2_1:42142779-42142798 None:intergenic 45.0%
TGATCGCTTTCGAGAATTGC+AGG + chr2_1:42142797-42142816 Msa0208020:CDS 45.0%
!! CCATGAGTTGGTCCTCAATA+GGG - chr2_1:42143073-42143092 None:intergenic 45.0%
ATGAAAAGGGGGCCAACATT+AGG + chr2_1:42143214-42143233 Msa0208020:intron 45.0%
ATACGAAGGAGGCCTAATGT+TGG - chr2_1:42143229-42143248 None:intergenic 45.0%
ATTAGGCCTCCTTCGTATGT+GGG + chr2_1:42143231-42143250 Msa0208020:intron 45.0%
TATGTGGGGCCTACAACTTT+GGG + chr2_1:42143246-42143265 Msa0208020:intron 45.0%
TCCATAAGCCCCAAAGTTGT+AGG - chr2_1:42143258-42143277 None:intergenic 45.0%
!! CTTTGGGGCTTATGGAAAAG+AGG + chr2_1:42143262-42143281 Msa0208020:intron 45.0%
TACATCACTGCTGCAGGATT+TGG + chr2_1:42143845-42143864 Msa0208020:CDS 45.0%
! GCAGTTTACCACAGCTCTAA+AGG - chr2_1:42144154-42144173 None:intergenic 45.0%
GTTAAGATCCAGTCACCAAC+TGG - chr2_1:42144227-42144246 None:intergenic 45.0%
!! TAGTGGGTTGGATAGAAGTG+CGG + chr2_1:42144476-42144495 Msa0208020:intron 45.0%
! GGGATGCATTTGTTAGGAAG+AGG + chr2_1:42144498-42144517 Msa0208020:intron 45.0%
GTTGTCATGCATTGAGGAGA+GGG + chr2_1:42144631-42144650 Msa0208020:intron 45.0%
! TCCTGAATGCTTTTCCTCGA+TGG + chr2_1:42144971-42144990 Msa0208020:intron 45.0%
TTTCACGGTGTGGAAATTCC+AGG + chr2_1:42145047-42145066 Msa0208020:CDS 45.0%
TGTGGAAATTCCAGGCTCTA+AGG + chr2_1:42145055-42145074 Msa0208020:CDS 45.0%
AATTGAGGTTCCTTAGAGCC+TGG - chr2_1:42145068-42145087 None:intergenic 45.0%
ACCCAAGAGAATCCTCACAT+AGG - chr2_1:42145355-42145374 None:intergenic 45.0%
TATGTGAGGATTCTCTTGGG+TGG + chr2_1:42145354-42145373 Msa0208020:intron 45.0%
TGAGCTTAAGAGCTCTACGA+TGG + chr2_1:42145609-42145628 Msa0208020:intron 45.0%
CTGTTGTCAAAGCGGAAATG+TGG + chr2_1:42145658-42145677 Msa0208020:intron 45.0%
CAGATTCAATGCTGCCAAAG+CGG - chr2_1:42145927-42145946 None:intergenic 45.0%
AGCGTGTCGTATGTGAATAG+TGG - chr2_1:42145981-42146000 None:intergenic 45.0%
TCTAGGAGCTTATCTCTGGT+AGG - chr2_1:42146114-42146133 None:intergenic 45.0%
AGAGAAGTTCTCTCTGGTCT+AGG - chr2_1:42146131-42146150 None:intergenic 45.0%
TTCTGAATGCCTCATCCTCT+AGG + chr2_1:42146173-42146192 Msa0208020:intron 45.0%
GACTATCAATGCCACGTGAA+TGG + chr2_1:42146226-42146245 Msa0208020:intron 45.0%
CGAATCCACTTTGACCTTTC+AGG + chr2_1:42146328-42146347 Msa0208020:intron 45.0%
AGGAACCTGAAAGGTCAAAG+TGG - chr2_1:42146336-42146355 None:intergenic 45.0%
ACAAAGTCATGAACCCTTCC+AGG + chr2_1:42148032-42148051 Msa0208020:intron 45.0%
ATCAGCGACAAGTAGTTTGG+TGG + chr2_1:42148341-42148360 Msa0208020:intron 45.0%
! ACAAGTAGTTTGGTGGAGGA+AGG + chr2_1:42148348-42148367 Msa0208020:intron 45.0%
! TTTGGTGGAGGAAGGTTTTG+TGG + chr2_1:42148356-42148375 Msa0208020:intron 45.0%
!! TTGGTGGAGGAAGGTTTTGT+GGG + chr2_1:42148357-42148376 Msa0208020:intron 45.0%
GAGCCTTCCTACAAGTAATG+TGG + chr2_1:42148504-42148523 Msa0208020:intron 45.0%
GCTGAATACTCACAACCTTG+AGG - chr2_1:42149009-42149028 None:intergenic 45.0%
AAACAGACTTCATGGTGCAC+AGG - chr2_1:42149097-42149116 None:intergenic 45.0%
CGGCTTGAAAACAGACTTCA+TGG - chr2_1:42149105-42149124 None:intergenic 45.0%
AGCTAGCAAGTGCGTAAACA+CGG - chr2_1:42149125-42149144 None:intergenic 45.0%
ACAGAAAGTAGCCACTGGAA+AGG + chr2_1:42149163-42149182 Msa0208020:intron 45.0%
TGACACAGAAACCTTTCCAG+TGG - chr2_1:42149177-42149196 None:intergenic 45.0%
GAGACAGAGAAGACAGCAAA+TGG - chr2_1:42149220-42149239 None:intergenic 45.0%
TATCCCTAAGCCTGACACTT+GGG - chr2_1:42149466-42149485 None:intergenic 45.0%
ATATCCCTAAGCCTGACACT+TGG - chr2_1:42149467-42149486 None:intergenic 45.0%
AGCTCATGACCCTACCTTTA+AGG - chr2_1:42150184-42150203 None:intergenic 45.0%
TAAAGGTAGGGTCATGAGCT+TGG + chr2_1:42150184-42150203 Msa0208020:intron 45.0%
ATTACCTCTTGAGGTCTGTC+TGG - chr2_1:42150776-42150795 None:intergenic 45.0%
!! TTGACTTTTGGGTATGGGAG+GGG + chr2_1:42151002-42151021 Msa0208020:intron 45.0%
TGGGAAATTTACTTGGCCAG+TGG + chr2_1:42151124-42151143 Msa0208020:intron 45.0%
GAAATTTACTTGGCCAGTGG+TGG + chr2_1:42151127-42151146 Msa0208020:intron 45.0%
! TAAACTCGGTATCTGGCTCA+AGG + chr2_1:42151548-42151567 Msa0208020:intron 45.0%
CTCAAGGAACGACTAATCTG+AGG + chr2_1:42151564-42151583 Msa0208020:intron 45.0%
CAAGGAACGACTAATCTGAG+GGG + chr2_1:42151566-42151585 Msa0208020:intron 45.0%
CAATCCCACTGTCCATTTGT+GGG + chr2_1:42151591-42151610 Msa0208020:intron 45.0%
AATCCCACTGTCCATTTGTG+GGG + chr2_1:42151592-42151611 Msa0208020:intron 45.0%
!! CTTTGCTCTGGCTTTAAACG+GGG - chr2_1:42151618-42151637 None:intergenic 45.0%
!! GCTTTGCTCTGGCTTTAAAC+GGG - chr2_1:42151619-42151638 None:intergenic 45.0%
!!! GTCTCAGTTTTGATTCCCAC+CGG - chr2_1:42151672-42151691 None:intergenic 45.0%
GGGAATCAAAACTGAGACCT+TGG + chr2_1:42151674-42151693 Msa0208020:intron 45.0%
ATCAAAACTGAGACCTTGGG+TGG + chr2_1:42151678-42151697 Msa0208020:intron 45.0%
!!! GTGTGTGTGTGTTTTGGCTT+GGG - chr2_1:42151718-42151737 None:intergenic 45.0%
!!! TGTGTGTGTGTGTTTTGGCT+TGG - chr2_1:42151719-42151738 None:intergenic 45.0%
! GTGTGTGTGTGTGTGTGTTT+TGG - chr2_1:42151724-42151743 None:intergenic 45.0%
TAACTACCTTGCTCCTAACC+AGG + chr2_1:42151794-42151813 Msa0208020:intron 45.0%
CAATACAACTGATGCCCTGA+AGG - chr2_1:42151827-42151846 None:intergenic 45.0%
ACATGTCCTCAAGTGGAACA+GGG - chr2_1:42151935-42151954 None:intergenic 45.0%
TACATGTCCTCAAGTGGAAC+AGG - chr2_1:42151936-42151955 None:intergenic 45.0%
!! ACACCTTTTCTGGTCTCTGT+GGG + chr2_1:42152110-42152129 Msa0208020:CDS 45.0%
!! TAGGCCTTTAGTTTGAGCTC+TGG + chr2_1:42152505-42152524 Msa0208020:three_prime_UTR 45.0%
GCTACCAGAGCTCAAACTAA+AGG - chr2_1:42152512-42152531 None:intergenic 45.0%
!!! ATATTTTATAATAGTTATAT+AGG + chr2_1:42143610-42143629 Msa0208020:intron 5.0%
!! ATAATTAAATAACAAAATTA+AGG - chr2_1:42147243-42147262 None:intergenic 5.0%
! CACCGTGCAGGTTCATTTTC+GGG - chr2_1:42141990-42142009 None:intergenic 50.0%
GGAAATGTTAACTGGTGCCC+CGG + chr2_1:42142109-42142128 Msa0208020:intron 50.0%
GAAATGTTAACTGGTGCCCC+GGG + chr2_1:42142110-42142129 Msa0208020:intron 50.0%
AGGTCTTTAACCAATGCCCG+GGG - chr2_1:42142129-42142148 None:intergenic 50.0%
GTGGCCTAAGCTAGGATTTC+TGG + chr2_1:42142206-42142225 Msa0208020:intron 50.0%
GCAAGGACATGTTCAAGACC+TGG + chr2_1:42142423-42142442 Msa0208020:CDS 50.0%
GTTGGGGCCATACAATCTGA+TGG - chr2_1:42142763-42142782 None:intergenic 50.0%
CCCTATTGAGGACCAACTCA+TGG + chr2_1:42143070-42143089 Msa0208020:intron 50.0%
!! GCCATGAGTTGGTCCTCAAT+AGG - chr2_1:42143074-42143093 None:intergenic 50.0%
ATTTGAGTGGGGCCATGAGT+TGG - chr2_1:42143085-42143104 None:intergenic 50.0%
CATTAGGCCTCCTTCGTATG+TGG + chr2_1:42143230-42143249 Msa0208020:intron 50.0%
TTAGGCCTCCTTCGTATGTG+GGG + chr2_1:42143232-42143251 Msa0208020:intron 50.0%
GTATGTGGGGCCTACAACTT+TGG + chr2_1:42143245-42143264 Msa0208020:intron 50.0%
ATGTGGGGCCTACAACTTTG+GGG + chr2_1:42143247-42143266 Msa0208020:intron 50.0%
!! GCCTACAACTTTGGGGCTTA+TGG + chr2_1:42143254-42143273 Msa0208020:intron 50.0%
!! CTGCAGGATTTGGTGCTAAG+TGG + chr2_1:42143855-42143874 Msa0208020:CDS 50.0%
!! GGATTTGGTGCTAAGTGGCT+TGG + chr2_1:42143860-42143879 Msa0208020:CDS 50.0%
CGATGCAAGTTCGTCCAGTA+AGG - chr2_1:42144279-42144298 None:intergenic 50.0%
!! AGTGGGTTGGATAGAAGTGC+GGG + chr2_1:42144477-42144496 Msa0208020:intron 50.0%
AGTGCGGGGATGCATTTGTT+AGG + chr2_1:42144492-42144511 Msa0208020:intron 50.0%
CGTTGTCATGCATTGAGGAG+AGG + chr2_1:42144630-42144649 Msa0208020:intron 50.0%
TCATGCATTGAGGAGAGGGA+AGG + chr2_1:42144635-42144654 Msa0208020:intron 50.0%
!! GCCATCGAGGAAAAGCATTC+AGG - chr2_1:42144975-42144994 None:intergenic 50.0%
TTCTCGCATATCTGCCATCG+AGG - chr2_1:42144988-42145007 None:intergenic 50.0%
!! TCTTGGGTGGCTAGCCTAAT+TGG + chr2_1:42145367-42145386 Msa0208020:intron 50.0%
GCTTAAGAGCTCTACGATGG+TGG + chr2_1:42145612-42145631 Msa0208020:intron 50.0%
GGCCACCTCAAAAATTGGTG+CGG + chr2_1:42145689-42145708 Msa0208020:intron 50.0%
!! CACCGCACCAATTTTTGAGG+TGG - chr2_1:42145694-42145713 None:intergenic 50.0%
CCTCAAAAATTGGTGCGGTG+CGG + chr2_1:42145694-42145713 Msa0208020:intron 50.0%
CTCAAAAATTGGTGCGGTGC+GGG + chr2_1:42145695-42145714 Msa0208020:intron 50.0%
!!! GCGTAGTGGGCACTATTTTG+TGG + chr2_1:42145726-42145745 Msa0208020:intron 50.0%
GGCAAAACCATCATTCTGCG+TGG + chr2_1:42145887-42145906 Msa0208020:intron 50.0%
ACACACACCACGCAGAATGA+TGG - chr2_1:42145897-42145916 None:intergenic 50.0%
TCTGCGTGGTGTGTGTATAG+CGG + chr2_1:42145901-42145920 Msa0208020:intron 50.0%
GGTAGGAGTTCTCTGAACTC+TGG - chr2_1:42146097-42146116 None:intergenic 50.0%
CTGGTCTAGGAGCTTATCTC+TGG - chr2_1:42146118-42146137 None:intergenic 50.0%
ACAGGAAAGCCTAGAGGATG+AGG - chr2_1:42146185-42146204 None:intergenic 50.0%
! GGTCAAAGTGGATTCGGGAA+TGG - chr2_1:42146324-42146343 None:intergenic 50.0%
ATGACTGTAGGCTGCACAAC+TGG - chr2_1:42147045-42147064 None:intergenic 50.0%
AGAGAGAGATTGGAGTGCGA+TGG + chr2_1:42147080-42147099 Msa0208020:intron 50.0%
AGGAGGGATGGTCTACAACA+CGG - chr2_1:42148083-42148102 None:intergenic 50.0%
GACAACGTCATTGTCGAGGA+GGG - chr2_1:42148099-42148118 None:intergenic 50.0%
TGACAACGTCATTGTCGAGG+AGG - chr2_1:42148100-42148119 None:intergenic 50.0%
TCCTCGACAATGACGTTGTC+AGG + chr2_1:42148099-42148118 Msa0208020:intron 50.0%
TCCTGACAACGTCATTGTCG+AGG - chr2_1:42148103-42148122 None:intergenic 50.0%
ACGTTTGAACCCCAAGCTCA+GGG - chr2_1:42148126-42148145 None:intergenic 50.0%
AACGTTTGAACCCCAAGCTC+AGG - chr2_1:42148127-42148146 None:intergenic 50.0%
GTTGTTGAAAGGGGTGGTCT+CGG + chr2_1:42148295-42148314 Msa0208020:intron 50.0%
! AGCGACAAGTAGTTTGGTGG+AGG + chr2_1:42148344-42148363 Msa0208020:intron 50.0%
!! TGGTGGAGGAAGGTTTTGTG+GGG + chr2_1:42148358-42148377 Msa0208020:intron 50.0%
TGCTTGTGTTTCAGCTCCAG+CGG - chr2_1:42148657-42148676 None:intergenic 50.0%
TGTCACTATGAGGCTGAGTG+TGG + chr2_1:42149049-42149068 Msa0208020:intron 50.0%
CTGAGTGTGGACACAAGACT+GGG + chr2_1:42149062-42149081 Msa0208020:intron 50.0%
TGAGTGTGGACACAAGACTG+GGG + chr2_1:42149063-42149082 Msa0208020:intron 50.0%
! GGACACAAGACTGGGGATTT+TGG + chr2_1:42149070-42149089 Msa0208020:intron 50.0%
CATGCACAGAAAGTAGCCAC+TGG + chr2_1:42149158-42149177 Msa0208020:intron 50.0%
ATGCCCAAGTGTCAGGCTTA+GGG + chr2_1:42149460-42149479 Msa0208020:intron 50.0%
CCACAAATGGACAGTGGGAT+TGG - chr2_1:42151593-42151612 None:intergenic 50.0%
CCAATCCCACTGTCCATTTG+TGG + chr2_1:42151590-42151609 Msa0208020:intron 50.0%
TTTAAACGGGGCCCCACAAA+TGG - chr2_1:42151606-42151625 None:intergenic 50.0%
AGCCAGAGCAAAGCTCTGTA+TGG + chr2_1:42151625-42151644 Msa0208020:intron 50.0%
GTCCATACAGAGCTTTGCTC+TGG - chr2_1:42151630-42151649 None:intergenic 50.0%
ATGGACCAGTCCACCGAAAT+TGG + chr2_1:42151644-42151663 Msa0208020:intron 50.0%
! ATTCCCACCGGTGCCAATTT+CGG - chr2_1:42151660-42151679 None:intergenic 50.0%
TGAAGGACTGTAGCCTGGTT+AGG - chr2_1:42151810-42151829 None:intergenic 50.0%
TAACCAGGCTACAGTCCTTC+AGG + chr2_1:42151809-42151828 Msa0208020:intron 50.0%
AACCAGGCTACAGTCCTTCA+GGG + chr2_1:42151810-42151829 Msa0208020:intron 50.0%
TGAATGCCCTGTTCCACTTG+AGG + chr2_1:42151926-42151945 Msa0208020:intron 50.0%
! CAGAGACCAGAAAAGGTGTG+AGG - chr2_1:42152109-42152128 None:intergenic 50.0%
!! CACACCTTTTCTGGTCTCTG+TGG + chr2_1:42152109-42152128 Msa0208020:CDS 50.0%
!! CACCTTTTCTGGTCTCTGTG+GGG + chr2_1:42152111-42152130 Msa0208020:CDS 50.0%
!! ACCTTTTCTGGTCTCTGTGG+GGG + chr2_1:42152112-42152131 Msa0208020:CDS 50.0%
GTATGCGCTCACTACGATCA+AGG + chr2_1:42152476-42152495 Msa0208020:three_prime_UTR 50.0%
GTCTTTCGAATTGGGCGGTG+TGG - chr2_1:42141580-42141599 None:intergenic 55.0%
CAACTCTCCTAACACCGTGC+AGG - chr2_1:42142002-42142021 None:intergenic 55.0%
CCTCCCAAATTGACGACTCG+AGG - chr2_1:42142065-42142084 None:intergenic 55.0%
CCTCGAGTCGTCAATTTGGG+AGG + chr2_1:42142062-42142081 Msa0208020:intron 55.0%
GTTGTAGGCCCCACATACGA+AGG - chr2_1:42143243-42143262 None:intergenic 55.0%
GCGCATACTCTTGCTCCATC+AGG + chr2_1:42143920-42143939 Msa0208020:CDS 55.0%
!! AGGGGTCTCCTTTAGAGCTG+TGG + chr2_1:42144143-42144162 Msa0208020:intron 55.0%
!! CGGTTTGAGGAGTAGTGGGT+TGG + chr2_1:42144464-42144483 Msa0208020:intron 55.0%
!! GTGGGTTGGATAGAAGTGCG+GGG + chr2_1:42144478-42144497 Msa0208020:intron 55.0%
GCATTGAGGAGAGGGAAGGA+AGG + chr2_1:42144639-42144658 Msa0208020:intron 55.0%
GTCAAAGCGGAAATGTGGCG+CGG + chr2_1:42145663-42145682 Msa0208020:intron 55.0%
! CCGCACCGCACCAATTTTTG+AGG - chr2_1:42145697-42145716 None:intergenic 55.0%
! GTGGGCACTATTTTGTGGCG+CGG + chr2_1:42145731-42145750 Msa0208020:intron 55.0%
TGTGTGTATAGCGGCCGCTT+TGG + chr2_1:42145910-42145929 Msa0208020:intron 55.0%
AGGGGTTGTGCTACCTGGAA+GGG - chr2_1:42148048-42148067 None:intergenic 55.0%
TAGGGGTTGTGCTACCTGGA+AGG - chr2_1:42148049-42148068 None:intergenic 55.0%
GTGTTAGGGGTTGTGCTACC+TGG - chr2_1:42148053-42148072 None:intergenic 55.0%
ATGGTCTACAACACGGGGAG+GGG - chr2_1:42148076-42148095 None:intergenic 55.0%
GATGGTCTACAACACGGGGA+GGG - chr2_1:42148077-42148096 None:intergenic 55.0%
GAGGGATGGTCTACAACACG+GGG - chr2_1:42148081-42148100 None:intergenic 55.0%
GGAGGGATGGTCTACAACAC+GGG - chr2_1:42148082-42148101 None:intergenic 55.0%
ACGTCATTGTCGAGGAGGGA+TGG - chr2_1:42148095-42148114 None:intergenic 55.0%
GTTGTCAGGACCCTGAGCTT+GGG + chr2_1:42148113-42148132 Msa0208020:intron 55.0%
TTGTCAGGACCCTGAGCTTG+GGG + chr2_1:42148114-42148133 Msa0208020:intron 55.0%
GTCTCGGTGGAGATTGGTGT+TGG + chr2_1:42148311-42148330 Msa0208020:intron 55.0%
GCTGAGTGTGGACACAAGAC+TGG + chr2_1:42149061-42149080 Msa0208020:intron 55.0%
CATGCCCAAGTGTCAGGCTT+AGG + chr2_1:42149459-42149478 Msa0208020:intron 55.0%
ACAGCCAGACAGACCTCAAG+AGG + chr2_1:42150769-42150788 Msa0208020:CDS 55.0%
CAGTCCACCGAAATTGGCAC+CGG + chr2_1:42151650-42151669 Msa0208020:intron 55.0%
CTGTAGCCTGGTTAGGAGCA+AGG - chr2_1:42151803-42151822 None:intergenic 55.0%
!! CACTGGCCTCACACCTTTTC+TGG + chr2_1:42152100-42152119 Msa0208020:CDS 55.0%
GTCTCTGTGGGGGCTAATTC+AGG + chr2_1:42152122-42152141 Msa0208020:CDS 55.0%
TTTGGGAGGTAGCCCAGTCC+TGG + chr2_1:42142076-42142095 Msa0208020:intron 60.0%
TTAACTGGTGCCCCGGGCAT+TGG + chr2_1:42142116-42142135 Msa0208020:intron 60.0%
!! AGTCTCGTAGCGGACCCAAG+TGG + chr2_1:42142187-42142206 Msa0208020:intron 60.0%
GGACCCAAGTGGCCTAAGCT+AGG + chr2_1:42142198-42142217 Msa0208020:intron 60.0%
GTAGGCCCCACATACGAAGG+AGG - chr2_1:42143240-42143259 None:intergenic 60.0%
GGCGCGGCCACCTCAAAAAT+TGG + chr2_1:42145684-42145703 Msa0208020:intron 60.0%
AAATTGGTGCGGTGCGGGAG+CGG + chr2_1:42145700-42145719 Msa0208020:intron 60.0%
TGCCCCGCACTGCTGAATAG+CGG + chr2_1:42145945-42145964 Msa0208020:intron 60.0%
AGCCCGCTATTCAGCAGTGC+GGG - chr2_1:42145951-42145970 None:intergenic 60.0%
CAGCCCGCTATTCAGCAGTG+CGG - chr2_1:42145952-42145971 None:intergenic 60.0%
ACATACGACACGCTCCGTCG+CGG + chr2_1:42145987-42146006 Msa0208020:intron 60.0%
TCCGCTACGCTCCGCTATAG+CGG + chr2_1:42146033-42146052 Msa0208020:intron 60.0%
GCGGCCGCTATTGACAACAG+AGG + chr2_1:42146061-42146080 Msa0208020:intron 60.0%
!! AACACGGGGAGGGGGTGTTA+GGG - chr2_1:42148067-42148086 None:intergenic 60.0%
TGGTCTACAACACGGGGAGG+GGG - chr2_1:42148075-42148094 None:intergenic 60.0%
GGATGGTCTACAACACGGGG+AGG - chr2_1:42148078-42148097 None:intergenic 60.0%
CGTTGTCAGGACCCTGAGCT+TGG + chr2_1:42148112-42148131 Msa0208020:intron 60.0%
GTTGAAAGGGGTGGTCTCGG+TGG + chr2_1:42148298-42148317 Msa0208020:intron 60.0%
TAGGAAGGCTCGAGCAGCAG+TGG - chr2_1:42148495-42148514 None:intergenic 60.0%
GGGCCCCACAAATGGACAGT+GGG - chr2_1:42151598-42151617 None:intergenic 60.0%
! CGGTGCCAATTTCGGTGGAC+TGG - chr2_1:42151652-42151671 None:intergenic 60.0%
! TCCACCGAAATTGGCACCGG+TGG + chr2_1:42151653-42151672 Msa0208020:intron 60.0%
!! CCACCGAAATTGGCACCGGT+GGG + chr2_1:42151654-42151673 Msa0208020:intron 60.0%
CCTTGAGTGTGCTCCACCCA+AGG - chr2_1:42151694-42151713 None:intergenic 60.0%
CCTTGGGTGGAGCACACTCA+AGG + chr2_1:42151691-42151710 Msa0208020:intron 60.0%
TGCCCTGAAGGACTGTAGCC+TGG - chr2_1:42151815-42151834 None:intergenic 60.0%
GCCCCCACAGAGACCAGAAA+AGG - chr2_1:42152116-42152135 None:intergenic 60.0%
AATTGGTGCGGTGCGGGAGC+GGG + chr2_1:42145701-42145720 Msa0208020:intron 65.0%
GCCCCGCACTGCTGAATAGC+GGG + chr2_1:42145946-42145965 Msa0208020:intron 65.0%
GCCCGCTATTCAGCAGTGCG+GGG - chr2_1:42145950-42145969 None:intergenic 65.0%
! CCCGCTATAGCGGAGCGTAG+CGG - chr2_1:42146037-42146056 None:intergenic 65.0%
CCGCTACGCTCCGCTATAGC+GGG + chr2_1:42146034-42146053 Msa0208020:intron 65.0%
! CTACGCTCCGCTATAGCGGG+TGG + chr2_1:42146037-42146056 Msa0208020:intron 65.0%
!! ACACGGGGAGGGGGTGTTAG+GGG - chr2_1:42148066-42148085 None:intergenic 65.0%
!! CAACACGGGGAGGGGGTGTT+AGG - chr2_1:42148068-42148087 None:intergenic 65.0%
GGGGTGGTCTCGGTGGAGAT+TGG + chr2_1:42148305-42148324 Msa0208020:intron 65.0%
GAAGGCTCGAGCAGCAGTGG+CGG - chr2_1:42148492-42148511 None:intergenic 65.0%
GGGGCCCCACAAATGGACAG+TGG - chr2_1:42151599-42151618 None:intergenic 65.0%
! CCCACCGGTGCCAATTTCGG+TGG - chr2_1:42151657-42151676 None:intergenic 65.0%
AGCGGAAATGTGGCGCGGCG+CGG + chr2_1:42145668-42145687 Msa0208020:intron 70.0%
ATTGGTGCGGTGCGGGAGCG+GGG + chr2_1:42145702-42145721 Msa0208020:intron 70.0%
!! CTCCGCTATAGCGGGTGGCG+CGG + chr2_1:42146042-42146061 Msa0208020:intron 70.0%
! TGCGGGAGCGGGGAGCGTAG+TGG + chr2_1:42145712-42145731 Msa0208020:intron 75.0%
! GCGGGAGCGGGGAGCGTAGT+GGG + chr2_1:42145713-42145732 Msa0208020:intron 75.0%
CGACACGCTCCGTCGCGGCT+AGG + chr2_1:42145992-42146011 Msa0208020:intron 75.0%
CGCTCCGTCGCGGCTAGGAG+CGG + chr2_1:42145997-42146016 Msa0208020:intron 75.0%
TCCGTCGCGGCTAGGAGCGG+TGG + chr2_1:42146000-42146019 Msa0208020:intron 75.0%
CCCACCGCTCCTAGCCGCGA+CGG - chr2_1:42146004-42146023 None:intergenic 75.0%
CCGTCGCGGCTAGGAGCGGT+GGG + chr2_1:42146001-42146020 Msa0208020:intron 75.0%
GGCCGCGCCACCCGCTATAG+CGG - chr2_1:42146047-42146066 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 42141535 42152680 42141535 ID=Msa0208020;Name=Msa0208020
chr2_1 mRNA 42141535 42152680 42141535 ID=Msa0208020-mRNA-1;Parent=Msa0208020;Name=Msa0208020-mRNA-1;_AED=0.06;_eAED=0.06;_QI=233|1|1|1|1|1|11|324|377
chr2_1 exon 42141535 42141904 42141535 ID=Msa0208020-mRNA-1:exon:12658;Parent=Msa0208020-mRNA-1
chr2_1 exon 42142415 42142506 42142415 ID=Msa0208020-mRNA-1:exon:12659;Parent=Msa0208020-mRNA-1
chr2_1 exon 42142712 42142818 42142712 ID=Msa0208020-mRNA-1:exon:12660;Parent=Msa0208020-mRNA-1
chr2_1 exon 42143836 42143941 42143836 ID=Msa0208020-mRNA-1:exon:12661;Parent=Msa0208020-mRNA-1
chr2_1 exon 42144997 42145119 42144997 ID=Msa0208020-mRNA-1:exon:12662;Parent=Msa0208020-mRNA-1
chr2_1 exon 42146424 42146515 42146424 ID=Msa0208020-mRNA-1:exon:12663;Parent=Msa0208020-mRNA-1
chr2_1 exon 42149650 42149734 42149650 ID=Msa0208020-mRNA-1:exon:12664;Parent=Msa0208020-mRNA-1
chr2_1 exon 42150504 42150609 42150504 ID=Msa0208020-mRNA-1:exon:12665;Parent=Msa0208020-mRNA-1
chr2_1 exon 42150724 42150790 42150724 ID=Msa0208020-mRNA-1:exon:12666;Parent=Msa0208020-mRNA-1
chr2_1 exon 42152051 42152143 42152051 ID=Msa0208020-mRNA-1:exon:12667;Parent=Msa0208020-mRNA-1
chr2_1 exon 42152231 42152680 42152231 ID=Msa0208020-mRNA-1:exon:12668;Parent=Msa0208020-mRNA-1
chr2_1 five_prime_UTR 42141535 42141767 42141535 ID=Msa0208020-mRNA-1:five_prime_utr;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42141768 42141904 42141768 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42142415 42142506 42142415 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42142712 42142818 42142712 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42143836 42143941 42143836 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42144997 42145119 42144997 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42146424 42146515 42146424 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42149650 42149734 42149650 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42150504 42150609 42150504 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42150724 42150790 42150724 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42152051 42152143 42152051 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 CDS 42152231 42152356 42152231 ID=Msa0208020-mRNA-1:cds;Parent=Msa0208020-mRNA-1
chr2_1 three_prime_UTR 42152357 42152680 42152357 ID=Msa0208020-mRNA-1:three_prime_utr;Parent=Msa0208020-mRNA-1
Gene Sequence

>Msa0208020

ATGGGTGGAAAAGTTAAGATCTGGAATCCCGTTGAAATCGCAGAACAAGCTCGGAATGATTACGCTTCGCAGATTTTTCCTTCTCTTCTCTCCATTGATCCTTCTCTTTCCCTTCCTCAAATGACACCTCTTGTCATTAATTTGTGCAAGGACATGTTCAAGACCTGGTCAAGTTTAGGTGATTCTTGCTTTAAAGTTGAGAAAATTTCTGGAGGCATAACAAATTTATTACTGAAGGTTTCGGTTAAACAAGGGGACTCTATTGATGATATTATAACCATCAGATTGTATGGCCCCAACACCGAGCATATCATTGATCGCTTTCGAGAATTGCAGGCCATCAAATACATCACTGCTGCAGGATTTGGTGCTAAGTGGCTTGGAATATTTGGAAATGGCATAGTGCAATCTTTTATTAATGCGCATACTCTTGCTCCATCAGATATGCGAGAACCAAAACTGGTTGCCAAAATAGCCAAACAACTGCAAAAATTTCACGGTGTGGAAATTCCAGGCTCTAAGGAACCTCAATTATGGAATGATATCTGGAAGTTTTTTGAGAAAGCATCTGTTCTAGAATTTGGTGATAATGAAAAGCAAAAGACTTACAAGACAGTTTCATTCAAGGAAGTTCATGATGAAATTTATGAGCTCCAGGTGTTGTGTGATCGTCTCAAATCTCCTATAATTTTTTCTCACAATGACTTGCTTTCTGGAAACATAATGATTAATCATGAAGAAGATAAACTTTACTTCATTGATTATGAGTATGCATCATACAACTACAGAGGCTATGACATAGGGAATCACTTTGCAGAATATGCTGGTTTTGAATGTGATTACTCCTTGTACCCAAATATGAACGAACAATATCATTTCTTCAGGCATTACTTACAGCCAGACAGACCTCAAGAGGTGTCTGAGAATGATCTTAAAACTTTGTATGTTGAGGTAAATACATATGCACTGGCCTCACACCTTTTCTGGTCTCTGTGGGGGCTAATTCAGGCAAAGATGTCCCCAATAGAATTTGATTATCTTGGTTACTTTTTCCTTCGATACAACGAGTACAAAAGGCAGAAAGAAAAGCTTGTATCGATGGCGCTATCCTACCTTTTAGAAAGGAATGAGTAG

Protein sequence

>Msa0208020

MGGKVKIWNPVEIAEQARNDYASQIFPSLLSIDPSLSLPQMTPLVINLCKDMFKTWSSLGDSCFKVEKISGGITNLLLKVSVKQGDSIDDIITIRLYGPNTEHIIDRFRELQAIKYITAAGFGAKWLGIFGNGIVQSFINAHTLAPSDMREPKLVAKIAKQLQKFHGVEIPGSKEPQLWNDIWKFFEKASVLEFGDNEKQKTYKTVSFKEVHDEIYELQVLCDRLKSPIIFSHNDLLSGNIMINHEEDKLYFIDYEYASYNYRGYDIGNHFAEYAGFECDYSLYPNMNEQYHFFRHYLQPDRPQEVSENDLKTLYVEVNTYALASHLFWSLWGLIQAKMSPIEFDYLGYFFLRYNEYKRQKEKLVSMALSYLLERNE*