Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210650 | GAU20217.1 | 65.110 | 728 | 247 | 3 | 31 | 753 | 3 | 728 | 0.0 | 1031 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210650 | sp|Q9SZL8|FRS5_ARATH | 30.420 | 572 | 386 | 7 | 72 | 634 | 69 | 637 | 2.59e-91 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210650 | A0A445I407 | 50.393 | 764 | 367 | 5 | 6 | 768 | 61 | 813 | 0.0 | 803 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0210650 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0210650 | Msa0210700 | 0.960653 | 8.425254e-119 | -8.615850e-47 |
| Msa0210650 | Msa0279920 | 0.987786 | 1.564328e-171 | -8.615850e-47 |
| Msa0210650 | Msa0289850 | 0.999559 | 1.037538e-322 | -8.615850e-47 |
| Msa0210650 | Msa0728840 | 0.853077 | 3.032970e-61 | -8.615850e-47 |
| Msa0210650 | Msa0777700 | 0.868375 | 6.840344e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210650 | MtrunA17_Chr1g0203051 | 44.444 | 603 | 322 | 4 | 26 | 618 | 22 | 621 | 0.0 | 570 |
| Msa0210650 | MtrunA17_Chr2g0287651 | 35.123 | 689 | 435 | 5 | 67 | 753 | 66 | 744 | 4.54e-148 | 456 |
| Msa0210650 | MtrunA17_Chr2g0308841 | 70.354 | 226 | 67 | 0 | 405 | 630 | 1 | 226 | 6.49e-120 | 361 |
| Msa0210650 | MtrunA17_Chr5g0448761 | 31.866 | 568 | 375 | 6 | 78 | 634 | 62 | 628 | 3.41e-99 | 325 |
| Msa0210650 | MtrunA17_Chr1g0202341 | 31.327 | 565 | 375 | 6 | 74 | 630 | 49 | 608 | 6.19e-97 | 316 |
| Msa0210650 | MtrunA17_Chr2g0324011 | 30.054 | 559 | 374 | 7 | 82 | 630 | 16 | 567 | 5.97e-85 | 281 |
| Msa0210650 | MtrunA17_Chr8g0363841 | 29.735 | 565 | 384 | 7 | 86 | 641 | 27 | 587 | 6.40e-80 | 270 |
| Msa0210650 | MtrunA17_Chr1g0198761 | 27.865 | 768 | 505 | 20 | 30 | 768 | 1 | 748 | 4.82e-79 | 270 |
| Msa0210650 | MtrunA17_Chr1g0203721 | 27.812 | 640 | 412 | 14 | 14 | 630 | 10 | 622 | 3.70e-78 | 270 |
| Msa0210650 | MtrunA17_Chr5g0441581 | 26.412 | 655 | 426 | 15 | 82 | 703 | 38 | 669 | 9.46e-75 | 256 |
| Msa0210650 | MtrunA17_Chr2g0287061 | 30.629 | 604 | 344 | 18 | 52 | 634 | 155 | 704 | 3.77e-72 | 251 |
| Msa0210650 | MtrunA17_Chr6g0458391 | 28.475 | 590 | 371 | 13 | 60 | 630 | 207 | 764 | 5.22e-72 | 250 |
| Msa0210650 | MtrunA17_Chr6g0458391 | 32.540 | 126 | 74 | 4 | 81 | 202 | 96 | 214 | 8.37e-13 | 72.0 |
| Msa0210650 | MtrunA17_Chr2g0296781 | 28.116 | 658 | 423 | 16 | 91 | 722 | 12 | 645 | 2.34e-71 | 248 |
| Msa0210650 | MtrunA17_Chr5g0440451 | 27.697 | 621 | 401 | 13 | 82 | 675 | 49 | 648 | 8.76e-69 | 244 |
| Msa0210650 | MtrunA17_Chr5g0448511 | 30.227 | 397 | 262 | 4 | 240 | 627 | 3 | 393 | 3.23e-67 | 232 |
| Msa0210650 | MtrunA17_Chr3g0118611 | 29.581 | 453 | 307 | 6 | 232 | 675 | 96 | 545 | 5.30e-65 | 231 |
| Msa0210650 | MtrunA17_Chr1g0207551 | 28.393 | 560 | 381 | 12 | 81 | 630 | 39 | 588 | 1.26e-64 | 231 |
| Msa0210650 | MtrunA17_Chr6g0477261 | 30.243 | 453 | 295 | 8 | 201 | 639 | 4 | 449 | 7.63e-64 | 226 |
| Msa0210650 | MtrunA17_Chr3g0082121 | 26.557 | 610 | 402 | 14 | 45 | 630 | 2 | 589 | 3.34e-63 | 224 |
| Msa0210650 | MtrunA17_Chr3g0080351 | 26.400 | 625 | 410 | 15 | 26 | 630 | 28 | 622 | 1.32e-61 | 223 |
| Msa0210650 | MtrunA17_Chr5g0431001 | 31.265 | 419 | 263 | 8 | 82 | 480 | 67 | 480 | 6.91e-60 | 211 |
| Msa0210650 | MtrunA17_Chr2g0329031 | 25.284 | 704 | 477 | 18 | 69 | 747 | 7 | 686 | 2.30e-59 | 214 |
| Msa0210650 | MtrunA17_Chr2g0276841 | 27.586 | 580 | 372 | 16 | 82 | 635 | 76 | 633 | 2.02e-58 | 211 |
| Msa0210650 | MtrunA17_Chr2g0291581 | 24.042 | 574 | 379 | 13 | 81 | 628 | 76 | 618 | 5.62e-55 | 201 |
| Msa0210650 | MtrunA17_Chr1g0196541 | 29.197 | 411 | 276 | 5 | 239 | 639 | 155 | 560 | 2.84e-54 | 200 |
| Msa0210650 | MtrunA17_Chr2g0290391 | 25.561 | 669 | 432 | 17 | 24 | 666 | 23 | 651 | 1.23e-53 | 197 |
| Msa0210650 | MtrunA17_Chr2g0291591 | 27.013 | 559 | 344 | 13 | 8 | 545 | 16 | 531 | 4.39e-53 | 193 |
| Msa0210650 | MtrunA17_Chr2g0294841 | 26.458 | 703 | 454 | 23 | 49 | 715 | 11 | 686 | 3.48e-50 | 188 |
| Msa0210650 | MtrunA17_Chr1g0164591 | 26.923 | 312 | 216 | 3 | 157 | 463 | 3 | 307 | 9.28e-37 | 141 |
| Msa0210650 | MtrunA17_Chr8g0389811 | 37.989 | 179 | 99 | 1 | 9 | 187 | 29 | 195 | 2.23e-35 | 133 |
| Msa0210650 | MtrunA17_Chr1g0171741 | 41.104 | 163 | 93 | 2 | 40 | 202 | 99 | 258 | 2.21e-34 | 132 |
| Msa0210650 | MtrunA17_Chr2g0331371 | 48.592 | 142 | 69 | 1 | 40 | 181 | 23 | 160 | 2.62e-33 | 127 |
| Msa0210650 | MtrunA17_Chr7g0258861 | 28.716 | 296 | 199 | 6 | 75 | 364 | 11 | 300 | 2.92e-33 | 130 |
| Msa0210650 | MtrunA17_Chr6g0473421 | 46.429 | 112 | 56 | 1 | 40 | 151 | 23 | 130 | 1.97e-26 | 105 |
| Msa0210650 | MtrunA17_Chr1g0172931 | 45.192 | 104 | 57 | 0 | 55 | 158 | 55 | 158 | 3.44e-25 | 102 |
| Msa0210650 | MtrunA17_Chr8g0340801 | 40.000 | 105 | 63 | 0 | 187 | 291 | 1 | 105 | 8.90e-23 | 94.0 |
| Msa0210650 | MtrunA17_Chr1g0193171 | 21.554 | 399 | 246 | 14 | 237 | 612 | 304 | 658 | 1.50e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210650 | AT4G38180.1 | 30.420 | 572 | 386 | 7 | 72 | 634 | 69 | 637 | 2.63e-92 | 306 |
| Msa0210650 | AT3G06250.2 | 29.749 | 558 | 337 | 12 | 80 | 630 | 194 | 703 | 1.32e-72 | 253 |
| Msa0210650 | AT3G06250.1 | 29.749 | 558 | 337 | 12 | 80 | 630 | 194 | 703 | 1.32e-72 | 253 |
| Msa0210650 | AT3G06250.3 | 29.749 | 558 | 337 | 12 | 80 | 630 | 194 | 703 | 1.32e-72 | 253 |
| Msa0210650 | AT5G18960.2 | 29.537 | 562 | 336 | 14 | 80 | 630 | 215 | 727 | 7.13e-71 | 248 |
| Msa0210650 | AT5G18960.1 | 29.537 | 562 | 336 | 14 | 80 | 630 | 215 | 727 | 7.13e-71 | 248 |
| Msa0210650 | AT3G22170.2 | 25.872 | 688 | 449 | 16 | 22 | 684 | 14 | 665 | 1.71e-69 | 245 |
| Msa0210650 | AT3G22170.1 | 25.872 | 688 | 449 | 16 | 22 | 684 | 14 | 665 | 1.71e-69 | 245 |
| Msa0210650 | AT4G15090.1 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
| Msa0210650 | AT4G15090.5 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
| Msa0210650 | AT4G15090.3 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
| Msa0210650 | AT4G15090.2 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
| Msa0210650 | AT4G15090.4 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
| Msa0210650 | AT2G27110.2 | 26.594 | 643 | 426 | 12 | 39 | 675 | 20 | 622 | 4.61e-65 | 233 |
| Msa0210650 | AT2G27110.1 | 26.594 | 643 | 426 | 12 | 39 | 675 | 20 | 622 | 4.61e-65 | 233 |
| Msa0210650 | AT1G76320.3 | 28.571 | 560 | 372 | 11 | 81 | 630 | 2 | 543 | 1.55e-62 | 223 |
| Msa0210650 | AT1G76320.1 | 28.571 | 560 | 372 | 11 | 81 | 630 | 2 | 543 | 2.77e-62 | 223 |
| Msa0210650 | AT1G76320.4 | 28.571 | 560 | 372 | 11 | 81 | 630 | 2 | 543 | 2.77e-62 | 223 |
| Msa0210650 | AT1G76320.2 | 28.571 | 560 | 372 | 11 | 81 | 630 | 2 | 543 | 2.94e-62 | 223 |
| Msa0210650 | AT2G27110.3 | 28.146 | 437 | 305 | 4 | 244 | 675 | 45 | 477 | 1.83e-61 | 220 |
| Msa0210650 | AT1G10240.2 | 28.916 | 581 | 381 | 16 | 82 | 644 | 54 | 620 | 1.55e-60 | 217 |
| Msa0210650 | AT1G10240.1 | 28.916 | 581 | 381 | 16 | 82 | 644 | 54 | 620 | 1.55e-60 | 217 |
| Msa0210650 | AT1G80010.1 | 29.131 | 587 | 375 | 17 | 81 | 641 | 100 | 671 | 1.38e-57 | 210 |
| Msa0210650 | AT2G32250.5 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 8.53e-57 | 208 |
| Msa0210650 | AT2G32250.7 | 26.895 | 554 | 353 | 11 | 81 | 628 | 2 | 509 | 1.37e-56 | 207 |
| Msa0210650 | AT2G32250.2 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.38e-56 | 208 |
| Msa0210650 | AT2G32250.4 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.38e-56 | 208 |
| Msa0210650 | AT2G32250.8 | 26.895 | 554 | 353 | 11 | 81 | 628 | 2 | 509 | 1.46e-56 | 207 |
| Msa0210650 | AT2G32250.6 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.65e-56 | 208 |
| Msa0210650 | AT2G32250.1 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.65e-56 | 208 |
| Msa0210650 | AT2G32250.3 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.65e-56 | 208 |
| Msa0210650 | AT1G52520.1 | 26.587 | 583 | 356 | 16 | 81 | 628 | 90 | 635 | 6.06e-54 | 199 |
| Msa0210650 | AT4G19990.5 | 25.346 | 651 | 421 | 14 | 68 | 695 | 13 | 621 | 8.13e-52 | 193 |
| Msa0210650 | AT4G19990.6 | 25.424 | 649 | 423 | 14 | 68 | 695 | 13 | 621 | 9.98e-52 | 194 |
| Msa0210650 | AT4G19990.2 | 25.424 | 649 | 423 | 14 | 68 | 695 | 13 | 621 | 9.98e-52 | 194 |
| Msa0210650 | AT4G19990.7 | 25.346 | 651 | 421 | 14 | 68 | 695 | 27 | 635 | 1.01e-51 | 193 |
| Msa0210650 | AT4G19990.3 | 25.346 | 651 | 421 | 14 | 68 | 695 | 13 | 621 | 1.02e-51 | 193 |
| Msa0210650 | AT4G19990.4 | 25.346 | 651 | 421 | 14 | 68 | 695 | 13 | 621 | 1.02e-51 | 193 |
| Msa0210650 | AT4G38170.1 | 27.297 | 370 | 259 | 4 | 283 | 643 | 46 | 414 | 1.82e-50 | 186 |
| Msa0210650 | AT5G28530.1 | 26.186 | 569 | 383 | 14 | 82 | 626 | 61 | 616 | 1.57e-48 | 183 |
| Msa0210650 | AT5G28530.3 | 26.011 | 569 | 380 | 14 | 82 | 626 | 61 | 612 | 1.92e-48 | 182 |
| Msa0210650 | AT5G28530.2 | 26.011 | 569 | 380 | 14 | 82 | 626 | 61 | 612 | 1.92e-48 | 182 |
| Msa0210650 | AT4G19990.1 | 25.373 | 603 | 388 | 13 | 114 | 695 | 3 | 564 | 1.30e-47 | 181 |
| Msa0210650 | AT5G28530.4 | 24.194 | 558 | 345 | 16 | 82 | 626 | 61 | 553 | 5.03e-31 | 129 |
| Msa0210650 | AT5G28530.5 | 24.014 | 558 | 342 | 16 | 82 | 626 | 61 | 549 | 5.36e-31 | 129 |
Find 153 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACACCTGGTATCATTTC+TGG | 0.155992 | 2_1:+50996189 | None:intergenic |
| ACACAAATGGTTCACAATAT+TGG | 0.219824 | 2_1:-50994704 | Msa0210650:CDS |
| CACAAATGGTTCACAATATT+GGG | 0.257023 | 2_1:-50994703 | Msa0210650:CDS |
| CATAATCTATGATGTGCTTT+TGG | 0.261343 | 2_1:+50995479 | None:intergenic |
| TGGCCTTTGATGCAACTTAT+AGG | 0.268825 | 2_1:-50995715 | Msa0210650:CDS |
| TGATCCAATTGTTGTCTTGC+AGG | 0.279613 | 2_1:+50995318 | None:intergenic |
| TGAATAAGTTTGAAGAACTA+TGG | 0.283312 | 2_1:-50995364 | Msa0210650:CDS |
| TCAAAGTTGTTGACTCCTTT+AGG | 0.283568 | 2_1:+50994357 | None:intergenic |
| ATTTCAAATGTTCGTGTCTT+AGG | 0.296750 | 2_1:-50994857 | Msa0210650:CDS |
| GGGAATGCTATAGTCATAAA+TGG | 0.304640 | 2_1:-50996460 | Msa0210650:CDS |
| AAGATGCATGTTGGGTGATA+TGG | 0.328276 | 2_1:-50995390 | Msa0210650:CDS |
| GTATGTGCAACATACATTAA+AGG | 0.333195 | 2_1:+50995821 | None:intergenic |
| CCTGTGTAAAACTAGATTCT+TGG | 0.335728 | 2_1:+50994764 | None:intergenic |
| CCGTCAGTTATTACGGATAA+AGG | 0.344378 | 2_1:+50995539 | None:intergenic |
| TCCGACTATCGTTCCAACTA+TGG | 0.344499 | 2_1:-50995098 | Msa0210650:CDS |
| ATTGCACCATACGTTTGATA+TGG | 0.351243 | 2_1:+50995983 | None:intergenic |
| CCAAGTTCTGAGGGACCGTT+TGG | 0.359223 | 2_1:-50996299 | Msa0210650:CDS |
| AACATCACCGTCAGTTATTA+CGG | 0.364947 | 2_1:+50995532 | None:intergenic |
| CTTCCACCAGGCGTGGCAAT+TGG | 0.369060 | 2_1:+50994438 | None:intergenic |
| CGCAAACTAGTTTGCAATAC+GGG | 0.372515 | 2_1:+50995071 | None:intergenic |
| CAATATTAACATCGAGGAAA+TGG | 0.372866 | 2_1:-50996578 | Msa0210650:CDS |
| ATTTCCTTTGTCTTCCTGAT+TGG | 0.374974 | 2_1:+50995903 | None:intergenic |
| CCAAACGGTCCCTCAGAACT+TGG | 0.376804 | 2_1:+50996299 | None:intergenic |
| TTCAGACGAAGGAGATAATA+TGG | 0.381516 | 2_1:-50996548 | Msa0210650:CDS |
| TTGGCCTGCAAGACAACAAT+TGG | 0.382041 | 2_1:-50995322 | Msa0210650:CDS |
| GTTTCAAAGTACTGTGGAAA+TGG | 0.394957 | 2_1:-50994918 | Msa0210650:CDS |
| TGAAGAACTATGGGAAGAAA+TGG | 0.400015 | 2_1:-50995354 | Msa0210650:CDS |
| CATTCATAGCAGTCGCAAAT+TGG | 0.400483 | 2_1:+50995570 | None:intergenic |
| CCACACCTGGTATCATTTCT+GGG | 0.408982 | 2_1:+50996190 | None:intergenic |
| TAAGGCATCTATGAAATTGC+TGG | 0.409527 | 2_1:+50995147 | None:intergenic |
| AGCGATTCATCCGAGTCTAA+TGG | 0.410491 | 2_1:-50996481 | Msa0210650:CDS |
| AGAAAATCTCCCTTGTAAAC+TGG | 0.412206 | 2_1:+50995024 | None:intergenic |
| CAATACGGGTTGACCATAGT+TGG | 0.415017 | 2_1:+50995085 | None:intergenic |
| AGTCGTCGACGAAAGTTTAC+TGG | 0.423532 | 2_1:-50994499 | Msa0210650:CDS |
| TTTAAGATATGACATGAAAT+CGG | 0.425674 | 2_1:+50995412 | None:intergenic |
| TCATGGTATGCAAGGGTAAA+CGG | 0.428944 | 2_1:-50996340 | Msa0210650:CDS |
| TATGTGCAACATACATTAAA+GGG | 0.429560 | 2_1:+50995822 | None:intergenic |
| TGCGCATAACCACGAGTTGT+TGG | 0.433550 | 2_1:-50996098 | Msa0210650:CDS |
| AAGGATTTGTATAACCAATC+AGG | 0.433589 | 2_1:-50995917 | Msa0210650:CDS |
| CACATCATAGATTATGTGCT+TGG | 0.435520 | 2_1:-50995472 | Msa0210650:CDS |
| GAGATAATATGGATGACAAT+GGG | 0.436783 | 2_1:-50996537 | Msa0210650:CDS |
| GGGATTCTCAAATTGCTTCA+AGG | 0.437802 | 2_1:-50994683 | Msa0210650:CDS |
| CTGTGTAAAACTAGATTCTT+GGG | 0.438174 | 2_1:+50994765 | None:intergenic |
| CCTACTTGTGTGAGGACTAA+AGG | 0.444636 | 2_1:-50994474 | Msa0210650:CDS |
| AGAGACATATGTTTGGTTGT+TGG | 0.446496 | 2_1:-50995594 | Msa0210650:CDS |
| CTACTTGTGTGAGGACTAAA+GGG | 0.449197 | 2_1:-50994473 | Msa0210650:CDS |
| GCGATTCATCCGAGTCTAAT+GGG | 0.449731 | 2_1:-50996480 | Msa0210650:CDS |
| TGTCTTAGGATGGAGTCGTT+TGG | 0.452899 | 2_1:-50994843 | Msa0210650:CDS |
| TATCTTAAAAGATGCATGTT+GGG | 0.464075 | 2_1:-50995398 | Msa0210650:CDS |
| CAAACTGTTGTCTTTGCGAC+AGG | 0.466297 | 2_1:-50995638 | Msa0210650:CDS |
| CTCGAAATCGAAAATATGTA+AGG | 0.466417 | 2_1:+50995129 | None:intergenic |
| TATGTGCTTGGCATCTTCTA+CGG | 0.467035 | 2_1:-50995460 | Msa0210650:CDS |
| CACGAACATTTGAAATCTAC+AGG | 0.467229 | 2_1:+50994864 | None:intergenic |
| AAATTAGTTTCATCTGACTT+TGG | 0.470983 | 2_1:-50995884 | Msa0210650:CDS |
| AGACGGAAGAGACATATGTT+TGG | 0.472860 | 2_1:-50995601 | Msa0210650:CDS |
| CGGAATGCATCATCGAATGT+TGG | 0.473100 | 2_1:-50995440 | Msa0210650:CDS |
| TTTCCTATAAGTTGCATCAA+AGG | 0.473501 | 2_1:+50995712 | None:intergenic |
| TGTAGTCAGTGTGGTGTGAT+AGG | 0.474905 | 2_1:-50994399 | Msa0210650:CDS |
| TATTCAGTTGTCGAAGGATG+TGG | 0.485194 | 2_1:-50994649 | Msa0210650:CDS |
| GTTGGTATTGATGCTAGCAC+TGG | 0.485843 | 2_1:-50994534 | Msa0210650:CDS |
| ATACTGTAGACAAAGATAAG+AGG | 0.486855 | 2_1:-50995802 | Msa0210650:CDS |
| GGAATGCATCATCGAATGTT+GGG | 0.488653 | 2_1:-50995439 | Msa0210650:CDS |
| CCTTTAGTCCTCACACAAGT+AGG | 0.488782 | 2_1:+50994474 | None:intergenic |
| TTCTCGCTTCCGCCTCTCCA+AGG | 0.489867 | 2_1:+50996213 | None:intergenic |
| CAGCATCGAACCAGTTTACA+AGG | 0.491061 | 2_1:-50995034 | Msa0210650:CDS |
| GGTGCAATGGCTAATTCATC+AGG | 0.491612 | 2_1:-50995968 | Msa0210650:CDS |
| TTGCATATAATTTCTACTCA+TGG | 0.494106 | 2_1:-50996357 | Msa0210650:CDS |
| AGAGGACAGGGGATTGACCT+TGG | 0.494325 | 2_1:-50996230 | Msa0210650:CDS |
| TTAGTTTCATCTGACTTTGG+CGG | 0.496753 | 2_1:-50995881 | Msa0210650:CDS |
| ATTGAAAAGTATAAGAATGT+TGG | 0.500015 | 2_1:-50996013 | Msa0210650:CDS |
| TCGCAAACTAGTTTGCAATA+CGG | 0.502777 | 2_1:+50995070 | None:intergenic |
| CACCGGAGAAAATAACAAAC+GGG | 0.508832 | 2_1:+50995675 | None:intergenic |
| CAAATTGCTTCAAGGTATGC+GGG | 0.516691 | 2_1:-50994675 | Msa0210650:CDS |
| TTGCCACGCCTGGTGGAAGT+AGG | 0.517312 | 2_1:-50994434 | Msa0210650:CDS |
| CAAATGTTCGTGTCTTAGGA+TGG | 0.523067 | 2_1:-50994853 | Msa0210650:CDS |
| AATAAACGATCATGTCCTAA+AGG | 0.523227 | 2_1:-50994372 | Msa0210650:CDS |
| ATTAATGAAGATGATGAAGA+AGG | 0.525000 | 2_1:-50994300 | Msa0210650:CDS |
| GTCGAAGGATGTGGCTGAGA+GGG | 0.529678 | 2_1:-50994640 | Msa0210650:CDS |
| CATAACCACGAGTTGTTGGA+TGG | 0.530438 | 2_1:-50996094 | Msa0210650:CDS |
| ACACCGGAGAAAATAACAAA+CGG | 0.530564 | 2_1:+50995674 | None:intergenic |
| GAATAAGTTTGAAGAACTAT+GGG | 0.530569 | 2_1:-50995363 | Msa0210650:CDS |
| ATTTCTACTCATGGTATGCA+AGG | 0.531446 | 2_1:-50996348 | Msa0210650:CDS |
| CTGTCGCAAAGACAACAGTT+TGG | 0.533935 | 2_1:+50995639 | None:intergenic |
| TCTAATCCAATTGCCACGCC+TGG | 0.535553 | 2_1:-50994444 | Msa0210650:CDS |
| TAGACATTGTTTCGAAGCGT+TGG | 0.536274 | 2_1:-50996141 | Msa0210650:CDS |
| GCTGTTAGCTTTCTATGTGC+CGG | 0.541367 | 2_1:+50996052 | None:intergenic |
| CAAGTTCTGAGGGACCGTTT+GGG | 0.542763 | 2_1:-50996298 | Msa0210650:CDS |
| AATCCAATTGCCACGCCTGG+TGG | 0.547004 | 2_1:-50994441 | Msa0210650:CDS |
| GTTATGCGCAAATTCAAATA+CGG | 0.547080 | 2_1:+50996111 | None:intergenic |
| TTGGTATTGATGCTAGCACT+GGG | 0.551813 | 2_1:-50994533 | Msa0210650:CDS |
| TTGTTGGATGGTTTGCTATG+TGG | 0.558740 | 2_1:-50996082 | Msa0210650:CDS |
| CAATTTGCGACTGCTATGAA+TGG | 0.559494 | 2_1:-50995569 | Msa0210650:CDS |
| TCTATTGTAGGTTATGGAGG+AGG | 0.559706 | 2_1:-50996629 | None:intergenic |
| GCATCAATACCAACAGCTGT+TGG | 0.560993 | 2_1:+50994543 | None:intergenic |
| GCTGCAGAACATTACCCAAA+CGG | 0.563552 | 2_1:+50996284 | None:intergenic |
| TGAAATTCAAGAGATGTCCA+TGG | 0.566346 | 2_1:-50994955 | Msa0210650:CDS |
| GTTCGAGCAAGATACACAAA+TGG | 0.566756 | 2_1:-50994717 | Msa0210650:CDS |
| TGCGACTGCTATGAATGGTA+AGG | 0.571209 | 2_1:-50995564 | Msa0210650:CDS |
| AAGAATAAACCAACAGCTGT+TGG | 0.571265 | 2_1:-50994552 | Msa0210650:CDS |
| GGAGATAATATGGATGACAA+TGG | 0.571879 | 2_1:-50996538 | Msa0210650:CDS |
| TTCGGAAGACCCAAGTTCTG+AGG | 0.573488 | 2_1:-50996309 | Msa0210650:CDS |
| TCAAATTGCTTCAAGGTATG+CGG | 0.574162 | 2_1:-50994676 | Msa0210650:CDS |
| TTTCTGTAGATGTAGTTGAA+AGG | 0.575027 | 2_1:-50996402 | Msa0210650:CDS |
| ATATCAAACGTATGGTGCAA+TGG | 0.580935 | 2_1:-50995981 | Msa0210650:CDS |
| CTTTAGTCCTCACACAAGTA+GGG | 0.582163 | 2_1:+50994475 | None:intergenic |
| GGGGATTGACCTTGGAGAGG+CGG | 0.582190 | 2_1:-50996222 | Msa0210650:CDS |
| CCACACTGACTACATGATTG+AGG | 0.582317 | 2_1:+50994408 | None:intergenic |
| GAGAACCCAGAAATGATACC+AGG | 0.586155 | 2_1:-50996195 | Msa0210650:CDS |
| GTAAGACCATATCAAACGTA+TGG | 0.586746 | 2_1:-50995989 | Msa0210650:CDS |
| AACTTTGTAGATAGAACCCA+TGG | 0.589394 | 2_1:+50994938 | None:intergenic |
| ACCATAGTTGGAACGATAGT+CGG | 0.596621 | 2_1:+50995097 | None:intergenic |
| GCTATAGTCATAAATGGCAT+CGG | 0.596967 | 2_1:-50996454 | Msa0210650:CDS |
| CGAACCACATCTCGGTGTGA+GGG | 0.597328 | 2_1:-50995227 | Msa0210650:CDS |
| ACGCCTACTTCCACCAGGCG+TGG | 0.597902 | 2_1:+50994431 | None:intergenic |
| GTAAAACTAGATTCTTGGGA+AGG | 0.598080 | 2_1:+50994769 | None:intergenic |
| GAGGGTTTATCAAGATGTAG+AGG | 0.601064 | 2_1:-50994622 | Msa0210650:CDS |
| GGGAATTATTCAGTTGTCGA+AGG | 0.603195 | 2_1:-50994655 | Msa0210650:CDS |
| TGGGCGACTGCTCATATCAA+AGG | 0.603639 | 2_1:-50995269 | Msa0210650:CDS |
| GAAATTCAAGAGATGTCCAT+GGG | 0.603913 | 2_1:-50994954 | Msa0210650:CDS |
| ACGAACCACATCTCGGTGTG+AGG | 0.609021 | 2_1:-50995228 | Msa0210650:CDS |
| ATGCATGTTGGGTGATATGG+AGG | 0.613251 | 2_1:-50995387 | Msa0210650:CDS |
| TCGGAAGACCCAAGTTCTGA+GGG | 0.617413 | 2_1:-50996308 | Msa0210650:CDS |
| ACAGCAATAATATGATCGCA+AGG | 0.619104 | 2_1:+50994816 | None:intergenic |
| CAAACGGTCCCTCAGAACTT+GGG | 0.622569 | 2_1:+50996300 | None:intergenic |
| ATATCTTAAAAGATGCATGT+TGG | 0.624704 | 2_1:-50995399 | Msa0210650:CDS |
| CAGGTATACGAACCACATCT+CGG | 0.625104 | 2_1:-50995235 | Msa0210650:CDS |
| GCAATGGCTAATTCATCAGG+TGG | 0.625760 | 2_1:-50995965 | Msa0210650:CDS |
| TACTGGACCCTACTTGTGTG+AGG | 0.626363 | 2_1:-50994482 | Msa0210650:CDS |
| TTTCTACTCATGGTATGCAA+GGG | 0.627306 | 2_1:-50996347 | Msa0210650:CDS |
| ATGGACGAAGCTTCAGACGA+AGG | 0.631163 | 2_1:-50996559 | Msa0210650:CDS |
| TAAACCCTCACACCGAGATG+TGG | 0.631791 | 2_1:+50995223 | None:intergenic |
| CCTTTATCCGTAATAACTGA+CGG | 0.633304 | 2_1:-50995539 | Msa0210650:CDS |
| AGGTTTAGTTACGAGAGAGA+CGG | 0.633832 | 2_1:-50995618 | Msa0210650:CDS |
| TACAAAGTTTCAAAGTACTG+TGG | 0.634037 | 2_1:-50994924 | Msa0210650:CDS |
| TTGGTTATGATGATTAACAC+CGG | 0.637737 | 2_1:+50995658 | None:intergenic |
| ACTGTGGAAATGGAAGTGTC+TGG | 0.638067 | 2_1:-50994908 | Msa0210650:CDS |
| TATAGCATTCCCATTAGACT+CGG | 0.641750 | 2_1:+50996471 | None:intergenic |
| GAGGGTTTACATAGTCACAT+AGG | 0.642304 | 2_1:-50995209 | Msa0210650:CDS |
| GCTTCGAAACAATGTCTATG+TGG | 0.645082 | 2_1:+50996146 | None:intergenic |
| AATGGGGCTAATGAGTGTGA+TGG | 0.645283 | 2_1:-50996520 | Msa0210650:CDS |
| CCCAGAAATGATACCAGGTG+TGG | 0.648094 | 2_1:-50996190 | Msa0210650:CDS |
| TGTGTGAGGACTAAAGGGTG+TGG | 0.651598 | 2_1:-50994468 | Msa0210650:CDS |
| TGTCGAAGGATGTGGCTGAG+AGG | 0.652941 | 2_1:-50994641 | Msa0210650:CDS |
| TGAGGACGCCTACTTCCACC+AGG | 0.673688 | 2_1:+50994426 | None:intergenic |
| ATAACCAATCAGGAAGACAA+AGG | 0.684750 | 2_1:-50995907 | Msa0210650:CDS |
| ACAGGGGATTGACCTTGGAG+AGG | 0.687350 | 2_1:-50996225 | Msa0210650:CDS |
| AGATAATATGGATGACAATG+GGG | 0.688595 | 2_1:-50996536 | Msa0210650:CDS |
| CCTCAATCATGTAGTCAGTG+TGG | 0.690892 | 2_1:-50994408 | Msa0210650:CDS |
| GCAAACCATCCAACAACTCG+TGG | 0.699078 | 2_1:+50996089 | None:intergenic |
| CACTAAGAAAATCTACAATG+CGG | 0.712293 | 2_1:+50994592 | None:intergenic |
| AGCATCGAACCAGTTTACAA+GGG | 0.716912 | 2_1:-50995033 | Msa0210650:CDS |
| TAATGACAATATTAACATCG+AGG | 0.732342 | 2_1:-50996584 | Msa0210650:CDS |
| TGGTATTGATGCTAGCACTG+GGG | 0.762460 | 2_1:-50994532 | Msa0210650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGAAAAGTATAAGAATGT+TGG | - | chr2_1:50994887-50994906 | Msa0210650:CDS | 20.0% |
| !!! | CGTATGAATTATGAAATTTT+TGG | - | chr2_1:50995154-50995173 | Msa0210650:CDS | 20.0% |
| !!! | TTTTGGAAATATACTCTTTA+TGG | + | chr2_1:50995407-50995426 | None:intergenic | 20.0% |
| !!! | TTTAAGATATGACATGAAAT+CGG | + | chr2_1:50995491-50995510 | None:intergenic | 20.0% |
| !!! | ATTGAAAAGTATAAGAATGT+TGG | - | chr2_1:50994887-50994906 | Msa0210650:CDS | 20.0% |
| !!! | CGTATGAATTATGAAATTTT+TGG | - | chr2_1:50995154-50995173 | Msa0210650:CDS | 20.0% |
| !!! | TTTTGGAAATATACTCTTTA+TGG | + | chr2_1:50995407-50995426 | None:intergenic | 20.0% |
| !!! | TTTAAGATATGACATGAAAT+CGG | + | chr2_1:50995491-50995510 | None:intergenic | 20.0% |
| ! | TAATGACAATATTAACATCG+AGG | - | chr2_1:50994316-50994335 | Msa0210650:CDS | 25.0% |
| ! | TTGCATATAATTTCTACTCA+TGG | - | chr2_1:50994543-50994562 | Msa0210650:CDS | 25.0% |
| !! | AAATTAGTTTCATCTGACTT+TGG | - | chr2_1:50995016-50995035 | Msa0210650:CDS | 25.0% |
| ! | TATGTGCAACATACATTAAA+GGG | + | chr2_1:50995081-50995100 | None:intergenic | 25.0% |
| !!! | TGAAATTTTTGGTGATGTAT+TGG | - | chr2_1:50995165-50995184 | Msa0210650:CDS | 25.0% |
| ! | ATATCTTAAAAGATGCATGT+TGG | - | chr2_1:50995501-50995520 | Msa0210650:CDS | 25.0% |
| ! | TATCTTAAAAGATGCATGTT+GGG | - | chr2_1:50995502-50995521 | Msa0210650:CDS | 25.0% |
| ! | TGAATAAGTTTGAAGAACTA+TGG | - | chr2_1:50995536-50995555 | Msa0210650:CDS | 25.0% |
| ! | GAATAAGTTTGAAGAACTAT+GGG | - | chr2_1:50995537-50995556 | Msa0210650:CDS | 25.0% |
| ! | GAAGAAATGGTTGAAAAATT+TGG | - | chr2_1:50995559-50995578 | Msa0210650:CDS | 25.0% |
| ! | TGTATGCAAAAAAAAGAATG+TGG | - | chr2_1:50995611-50995630 | Msa0210650:CDS | 25.0% |
| ! | GTATGCAAAAAAAAGAATGT+GGG | - | chr2_1:50995612-50995631 | Msa0210650:CDS | 25.0% |
| !!! | AAGATTTTTTCAGAGCATTA+CGG | + | chr2_1:50995909-50995928 | None:intergenic | 25.0% |
| ! | ATTAATGAAGATGATGAAGA+AGG | - | chr2_1:50996600-50996619 | Msa0210650:CDS | 25.0% |
| ! | TAATGACAATATTAACATCG+AGG | - | chr2_1:50994316-50994335 | Msa0210650:CDS | 25.0% |
| ! | TTGCATATAATTTCTACTCA+TGG | - | chr2_1:50994543-50994562 | Msa0210650:CDS | 25.0% |
| !! | AAATTAGTTTCATCTGACTT+TGG | - | chr2_1:50995016-50995035 | Msa0210650:CDS | 25.0% |
| ! | TATGTGCAACATACATTAAA+GGG | + | chr2_1:50995081-50995100 | None:intergenic | 25.0% |
| !!! | TGAAATTTTTGGTGATGTAT+TGG | - | chr2_1:50995165-50995184 | Msa0210650:CDS | 25.0% |
| ! | ATATCTTAAAAGATGCATGT+TGG | - | chr2_1:50995501-50995520 | Msa0210650:CDS | 25.0% |
| ! | TATCTTAAAAGATGCATGTT+GGG | - | chr2_1:50995502-50995521 | Msa0210650:CDS | 25.0% |
| ! | TGAATAAGTTTGAAGAACTA+TGG | - | chr2_1:50995536-50995555 | Msa0210650:CDS | 25.0% |
| ! | GAATAAGTTTGAAGAACTAT+GGG | - | chr2_1:50995537-50995556 | Msa0210650:CDS | 25.0% |
| ! | GAAGAAATGGTTGAAAAATT+TGG | - | chr2_1:50995559-50995578 | Msa0210650:CDS | 25.0% |
| ! | TGTATGCAAAAAAAAGAATG+TGG | - | chr2_1:50995611-50995630 | Msa0210650:CDS | 25.0% |
| ! | GTATGCAAAAAAAAGAATGT+GGG | - | chr2_1:50995612-50995631 | Msa0210650:CDS | 25.0% |
| !!! | AAGATTTTTTCAGAGCATTA+CGG | + | chr2_1:50995909-50995928 | None:intergenic | 25.0% |
| ! | ATTAATGAAGATGATGAAGA+AGG | - | chr2_1:50996600-50996619 | Msa0210650:CDS | 25.0% |
| CAATATTAACATCGAGGAAA+TGG | - | chr2_1:50994322-50994341 | Msa0210650:CDS | 30.0% | |
| GAGATAATATGGATGACAAT+GGG | - | chr2_1:50994363-50994382 | Msa0210650:CDS | 30.0% | |
| AGATAATATGGATGACAATG+GGG | - | chr2_1:50994364-50994383 | Msa0210650:CDS | 30.0% | |
| !! | CATCGGTGATATTTTAAAGA+TGG | - | chr2_1:50994463-50994482 | Msa0210650:CDS | 30.0% |
| TTTCTGTAGATGTAGTTGAA+AGG | - | chr2_1:50994498-50994517 | Msa0210650:CDS | 30.0% | |
| GTTATGCGCAAATTCAAATA+CGG | + | chr2_1:50994792-50994811 | None:intergenic | 30.0% | |
| !! | CAAGTTAGGTTTTGTGAAAA+AGG | - | chr2_1:50994964-50994983 | Msa0210650:CDS | 30.0% |
| AAGGATTTGTATAACCAATC+AGG | - | chr2_1:50994983-50995002 | Msa0210650:CDS | 30.0% | |
| GTATGTGCAACATACATTAA+AGG | + | chr2_1:50995082-50995101 | None:intergenic | 30.0% | |
| ATACTGTAGACAAAGATAAG+AGG | - | chr2_1:50995098-50995117 | Msa0210650:CDS | 30.0% | |
| TTTCCTATAAGTTGCATCAA+AGG | + | chr2_1:50995191-50995210 | None:intergenic | 30.0% | |
| TTGGTTATGATGATTAACAC+CGG | + | chr2_1:50995245-50995264 | None:intergenic | 30.0% | |
| ! | CATAATCTATGATGTGCTTT+TGG | + | chr2_1:50995424-50995443 | None:intergenic | 30.0% |
| !!! | ATCAAAGGAGAATTTTTTGC+AGG | - | chr2_1:50995646-50995665 | Msa0210650:CDS | 30.0% |
| CTCGAAATCGAAAATATGTA+AGG | + | chr2_1:50995774-50995793 | None:intergenic | 30.0% | |
| !! | TACAAAGTTTCAAAGTACTG+TGG | - | chr2_1:50995976-50995995 | Msa0210650:CDS | 30.0% |
| ATTTCAAATGTTCGTGTCTT+AGG | - | chr2_1:50996043-50996062 | Msa0210650:CDS | 30.0% | |
| !!! | TATTGCTGTTTTGATGTATC+TGG | - | chr2_1:50996098-50996117 | Msa0210650:CDS | 30.0% |
| CTGTGTAAAACTAGATTCTT+GGG | + | chr2_1:50996138-50996157 | None:intergenic | 30.0% | |
| ACACAAATGGTTCACAATAT+TGG | - | chr2_1:50996196-50996215 | Msa0210650:CDS | 30.0% | |
| CACAAATGGTTCACAATATT+GGG | - | chr2_1:50996197-50996216 | Msa0210650:CDS | 30.0% | |
| CACTAAGAAAATCTACAATG+CGG | + | chr2_1:50996311-50996330 | None:intergenic | 30.0% | |
| AATAAACGATCATGTCCTAA+AGG | - | chr2_1:50996528-50996547 | Msa0210650:CDS | 30.0% | |
| CAATATTAACATCGAGGAAA+TGG | - | chr2_1:50994322-50994341 | Msa0210650:CDS | 30.0% | |
| GAGATAATATGGATGACAAT+GGG | - | chr2_1:50994363-50994382 | Msa0210650:CDS | 30.0% | |
| AGATAATATGGATGACAATG+GGG | - | chr2_1:50994364-50994383 | Msa0210650:CDS | 30.0% | |
| !! | CATCGGTGATATTTTAAAGA+TGG | - | chr2_1:50994463-50994482 | Msa0210650:CDS | 30.0% |
| TTTCTGTAGATGTAGTTGAA+AGG | - | chr2_1:50994498-50994517 | Msa0210650:CDS | 30.0% | |
| GTTATGCGCAAATTCAAATA+CGG | + | chr2_1:50994792-50994811 | None:intergenic | 30.0% | |
| !! | CAAGTTAGGTTTTGTGAAAA+AGG | - | chr2_1:50994964-50994983 | Msa0210650:CDS | 30.0% |
| AAGGATTTGTATAACCAATC+AGG | - | chr2_1:50994983-50995002 | Msa0210650:CDS | 30.0% | |
| GTATGTGCAACATACATTAA+AGG | + | chr2_1:50995082-50995101 | None:intergenic | 30.0% | |
| ATACTGTAGACAAAGATAAG+AGG | - | chr2_1:50995098-50995117 | Msa0210650:CDS | 30.0% | |
| TTTCCTATAAGTTGCATCAA+AGG | + | chr2_1:50995191-50995210 | None:intergenic | 30.0% | |
| TTGGTTATGATGATTAACAC+CGG | + | chr2_1:50995245-50995264 | None:intergenic | 30.0% | |
| ! | CATAATCTATGATGTGCTTT+TGG | + | chr2_1:50995424-50995443 | None:intergenic | 30.0% |
| !!! | ATCAAAGGAGAATTTTTTGC+AGG | - | chr2_1:50995646-50995665 | Msa0210650:CDS | 30.0% |
| CTCGAAATCGAAAATATGTA+AGG | + | chr2_1:50995774-50995793 | None:intergenic | 30.0% | |
| !! | TACAAAGTTTCAAAGTACTG+TGG | - | chr2_1:50995976-50995995 | Msa0210650:CDS | 30.0% |
| ATTTCAAATGTTCGTGTCTT+AGG | - | chr2_1:50996043-50996062 | Msa0210650:CDS | 30.0% | |
| !!! | TATTGCTGTTTTGATGTATC+TGG | - | chr2_1:50996098-50996117 | Msa0210650:CDS | 30.0% |
| CTGTGTAAAACTAGATTCTT+GGG | + | chr2_1:50996138-50996157 | None:intergenic | 30.0% | |
| ACACAAATGGTTCACAATAT+TGG | - | chr2_1:50996196-50996215 | Msa0210650:CDS | 30.0% | |
| CACAAATGGTTCACAATATT+GGG | - | chr2_1:50996197-50996216 | Msa0210650:CDS | 30.0% | |
| CACTAAGAAAATCTACAATG+CGG | + | chr2_1:50996311-50996330 | None:intergenic | 30.0% | |
| AATAAACGATCATGTCCTAA+AGG | - | chr2_1:50996528-50996547 | Msa0210650:CDS | 30.0% | |
| TTCAGACGAAGGAGATAATA+TGG | - | chr2_1:50994352-50994371 | Msa0210650:CDS | 35.0% | |
| GGAGATAATATGGATGACAA+TGG | - | chr2_1:50994362-50994381 | Msa0210650:CDS | 35.0% | |
| TATAGCATTCCCATTAGACT+CGG | + | chr2_1:50994432-50994451 | None:intergenic | 35.0% | |
| GGGAATGCTATAGTCATAAA+TGG | - | chr2_1:50994440-50994459 | Msa0210650:CDS | 35.0% | |
| GCTATAGTCATAAATGGCAT+CGG | - | chr2_1:50994446-50994465 | Msa0210650:CDS | 35.0% | |
| ATTTCTACTCATGGTATGCA+AGG | - | chr2_1:50994552-50994571 | Msa0210650:CDS | 35.0% | |
| TTTCTACTCATGGTATGCAA+GGG | - | chr2_1:50994553-50994572 | Msa0210650:CDS | 35.0% | |
| !! | AGCAAACTTTTGTTTGTTCG+CGG | - | chr2_1:50994636-50994655 | Msa0210650:CDS | 35.0% |
| !! | TTTGCTATGTGGTCTTTTAC+CGG | - | chr2_1:50994829-50994848 | Msa0210650:CDS | 35.0% |
| GTAAGACCATATCAAACGTA+TGG | - | chr2_1:50994911-50994930 | Msa0210650:CDS | 35.0% | |
| ATTGCACCATACGTTTGATA+TGG | + | chr2_1:50994920-50994939 | None:intergenic | 35.0% | |
| ATATCAAACGTATGGTGCAA+TGG | - | chr2_1:50994919-50994938 | Msa0210650:CDS | 35.0% | |
| ATAACCAATCAGGAAGACAA+AGG | - | chr2_1:50994993-50995012 | Msa0210650:CDS | 35.0% | |
| ATTTCCTTTGTCTTCCTGAT+TGG | + | chr2_1:50995000-50995019 | None:intergenic | 35.0% | |
| TTAGTTTCATCTGACTTTGG+CGG | - | chr2_1:50995019-50995038 | Msa0210650:CDS | 35.0% | |
| ACACCGGAGAAAATAACAAA+CGG | + | chr2_1:50995229-50995248 | None:intergenic | 35.0% | |
| AGAGACATATGTTTGGTTGT+TGG | - | chr2_1:50995306-50995325 | Msa0210650:CDS | 35.0% | |
| CCTTTATCCGTAATAACTGA+CGG | - | chr2_1:50995361-50995380 | Msa0210650:CDS | 35.0% | |
| AACATCACCGTCAGTTATTA+CGG | + | chr2_1:50995371-50995390 | None:intergenic | 35.0% | |
| CACATCATAGATTATGTGCT+TGG | - | chr2_1:50995428-50995447 | Msa0210650:CDS | 35.0% | |
| TGAAGAACTATGGGAAGAAA+TGG | - | chr2_1:50995546-50995565 | Msa0210650:CDS | 35.0% | |
| ! | TAAGGCATCTATGAAATTGC+TGG | + | chr2_1:50995756-50995775 | None:intergenic | 35.0% |
| ! | TCGCAAACTAGTTTGCAATA+CGG | + | chr2_1:50995833-50995852 | None:intergenic | 35.0% |
| AGAAAATCTCCCTTGTAAAC+TGG | + | chr2_1:50995879-50995898 | None:intergenic | 35.0% | |
| !! | TTTTCAGAGCATTACGGAAA+AGG | + | chr2_1:50995903-50995922 | None:intergenic | 35.0% |
| TGAAATTCAAGAGATGTCCA+TGG | - | chr2_1:50995945-50995964 | Msa0210650:CDS | 35.0% | |
| GAAATTCAAGAGATGTCCAT+GGG | - | chr2_1:50995946-50995965 | Msa0210650:CDS | 35.0% | |
| AACTTTGTAGATAGAACCCA+TGG | + | chr2_1:50995965-50995984 | None:intergenic | 35.0% | |
| !! | GTTTCAAAGTACTGTGGAAA+TGG | - | chr2_1:50995982-50996001 | Msa0210650:CDS | 35.0% |
| ! | CACGAACATTTGAAATCTAC+AGG | + | chr2_1:50996039-50996058 | None:intergenic | 35.0% |
| ACAGCAATAATATGATCGCA+AGG | + | chr2_1:50996087-50996106 | None:intergenic | 35.0% | |
| GTAAAACTAGATTCTTGGGA+AGG | + | chr2_1:50996134-50996153 | None:intergenic | 35.0% | |
| CCTGTGTAAAACTAGATTCT+TGG | + | chr2_1:50996139-50996158 | None:intergenic | 35.0% | |
| !!! | CCAAGAATCTAGTTTTACAC+AGG | - | chr2_1:50996136-50996155 | Msa0210650:CDS | 35.0% |
| !!! | AGAATCTAGTTTTACACAGG+TGG | - | chr2_1:50996139-50996158 | Msa0210650:CDS | 35.0% |
| TCAAATTGCTTCAAGGTATG+CGG | - | chr2_1:50996224-50996243 | Msa0210650:CDS | 35.0% | |
| !! | TTCTTAGTGCTGAACTTTTG+AGG | - | chr2_1:50996322-50996341 | Msa0210650:CDS | 35.0% |
| AAGAATAAACCAACAGCTGT+TGG | - | chr2_1:50996348-50996367 | Msa0210650:CDS | 35.0% | |
| !! | TCAAAGTTGTTGACTCCTTT+AGG | + | chr2_1:50996546-50996565 | None:intergenic | 35.0% |
| TTCAGACGAAGGAGATAATA+TGG | - | chr2_1:50994352-50994371 | Msa0210650:CDS | 35.0% | |
| GGAGATAATATGGATGACAA+TGG | - | chr2_1:50994362-50994381 | Msa0210650:CDS | 35.0% | |
| TATAGCATTCCCATTAGACT+CGG | + | chr2_1:50994432-50994451 | None:intergenic | 35.0% | |
| GGGAATGCTATAGTCATAAA+TGG | - | chr2_1:50994440-50994459 | Msa0210650:CDS | 35.0% | |
| GCTATAGTCATAAATGGCAT+CGG | - | chr2_1:50994446-50994465 | Msa0210650:CDS | 35.0% | |
| ATTTCTACTCATGGTATGCA+AGG | - | chr2_1:50994552-50994571 | Msa0210650:CDS | 35.0% | |
| TTTCTACTCATGGTATGCAA+GGG | - | chr2_1:50994553-50994572 | Msa0210650:CDS | 35.0% | |
| !! | AGCAAACTTTTGTTTGTTCG+CGG | - | chr2_1:50994636-50994655 | Msa0210650:CDS | 35.0% |
| !! | TTTGCTATGTGGTCTTTTAC+CGG | - | chr2_1:50994829-50994848 | Msa0210650:CDS | 35.0% |
| GTAAGACCATATCAAACGTA+TGG | - | chr2_1:50994911-50994930 | Msa0210650:CDS | 35.0% | |
| ATTGCACCATACGTTTGATA+TGG | + | chr2_1:50994920-50994939 | None:intergenic | 35.0% | |
| ATATCAAACGTATGGTGCAA+TGG | - | chr2_1:50994919-50994938 | Msa0210650:CDS | 35.0% | |
| ATAACCAATCAGGAAGACAA+AGG | - | chr2_1:50994993-50995012 | Msa0210650:CDS | 35.0% | |
| ATTTCCTTTGTCTTCCTGAT+TGG | + | chr2_1:50995000-50995019 | None:intergenic | 35.0% | |
| TTAGTTTCATCTGACTTTGG+CGG | - | chr2_1:50995019-50995038 | Msa0210650:CDS | 35.0% | |
| ACACCGGAGAAAATAACAAA+CGG | + | chr2_1:50995229-50995248 | None:intergenic | 35.0% | |
| AGAGACATATGTTTGGTTGT+TGG | - | chr2_1:50995306-50995325 | Msa0210650:CDS | 35.0% | |
| CCTTTATCCGTAATAACTGA+CGG | - | chr2_1:50995361-50995380 | Msa0210650:CDS | 35.0% | |
| AACATCACCGTCAGTTATTA+CGG | + | chr2_1:50995371-50995390 | None:intergenic | 35.0% | |
| CACATCATAGATTATGTGCT+TGG | - | chr2_1:50995428-50995447 | Msa0210650:CDS | 35.0% | |
| TGAAGAACTATGGGAAGAAA+TGG | - | chr2_1:50995546-50995565 | Msa0210650:CDS | 35.0% | |
| ! | TAAGGCATCTATGAAATTGC+TGG | + | chr2_1:50995756-50995775 | None:intergenic | 35.0% |
| ! | TCGCAAACTAGTTTGCAATA+CGG | + | chr2_1:50995833-50995852 | None:intergenic | 35.0% |
| AGAAAATCTCCCTTGTAAAC+TGG | + | chr2_1:50995879-50995898 | None:intergenic | 35.0% | |
| !! | TTTTCAGAGCATTACGGAAA+AGG | + | chr2_1:50995903-50995922 | None:intergenic | 35.0% |
| TGAAATTCAAGAGATGTCCA+TGG | - | chr2_1:50995945-50995964 | Msa0210650:CDS | 35.0% | |
| GAAATTCAAGAGATGTCCAT+GGG | - | chr2_1:50995946-50995965 | Msa0210650:CDS | 35.0% | |
| AACTTTGTAGATAGAACCCA+TGG | + | chr2_1:50995965-50995984 | None:intergenic | 35.0% | |
| !! | GTTTCAAAGTACTGTGGAAA+TGG | - | chr2_1:50995982-50996001 | Msa0210650:CDS | 35.0% |
| ! | CACGAACATTTGAAATCTAC+AGG | + | chr2_1:50996039-50996058 | None:intergenic | 35.0% |
| ACAGCAATAATATGATCGCA+AGG | + | chr2_1:50996087-50996106 | None:intergenic | 35.0% | |
| GTAAAACTAGATTCTTGGGA+AGG | + | chr2_1:50996134-50996153 | None:intergenic | 35.0% | |
| CCTGTGTAAAACTAGATTCT+TGG | + | chr2_1:50996139-50996158 | None:intergenic | 35.0% | |
| !!! | CCAAGAATCTAGTTTTACAC+AGG | - | chr2_1:50996136-50996155 | Msa0210650:CDS | 35.0% |
| !!! | AGAATCTAGTTTTACACAGG+TGG | - | chr2_1:50996139-50996158 | Msa0210650:CDS | 35.0% |
| TCAAATTGCTTCAAGGTATG+CGG | - | chr2_1:50996224-50996243 | Msa0210650:CDS | 35.0% | |
| !! | TTCTTAGTGCTGAACTTTTG+AGG | - | chr2_1:50996322-50996341 | Msa0210650:CDS | 35.0% |
| AAGAATAAACCAACAGCTGT+TGG | - | chr2_1:50996348-50996367 | Msa0210650:CDS | 35.0% | |
| !! | TCAAAGTTGTTGACTCCTTT+AGG | + | chr2_1:50996546-50996565 | None:intergenic | 35.0% |
| TCATGGTATGCAAGGGTAAA+CGG | - | chr2_1:50994560-50994579 | Msa0210650:CDS | 40.0% | |
| !! | GGGTAAACGGATTTTCTGTT+CGG | - | chr2_1:50994573-50994592 | Msa0210650:CDS | 40.0% |
| !! | GCAAACTTTTGTTTGTTCGC+GGG | - | chr2_1:50994637-50994656 | Msa0210650:CDS | 40.0% |
| GCTTCGAAACAATGTCTATG+TGG | + | chr2_1:50994757-50994776 | None:intergenic | 40.0% | |
| TAGACATTGTTTCGAAGCGT+TGG | - | chr2_1:50994759-50994778 | Msa0210650:CDS | 40.0% | |
| !! | TTGTTGGATGGTTTGCTATG+TGG | - | chr2_1:50994818-50994837 | Msa0210650:CDS | 40.0% |
| ! | TCAGGTGGTTTTCACAAGTT+AGG | - | chr2_1:50994950-50994969 | Msa0210650:CDS | 40.0% |
| !!! | AGAGGCTTGAACGTCTTTTT+TGG | - | chr2_1:50995116-50995135 | Msa0210650:CDS | 40.0% |
| !!! | GAACGTCTTTTTTGGTGTGA+TGG | - | chr2_1:50995124-50995143 | Msa0210650:CDS | 40.0% |
| TGGCCTTTGATGCAACTTAT+AGG | - | chr2_1:50995185-50995204 | Msa0210650:CDS | 40.0% | |
| !!! | TGCCCGTTTGTTATTTTCTC+CGG | - | chr2_1:50995223-50995242 | Msa0210650:CDS | 40.0% |
| CACCGGAGAAAATAACAAAC+GGG | + | chr2_1:50995228-50995247 | None:intergenic | 40.0% | |
| AGGTTTAGTTACGAGAGAGA+CGG | - | chr2_1:50995282-50995301 | Msa0210650:CDS | 40.0% | |
| AGACGGAAGAGACATATGTT+TGG | - | chr2_1:50995299-50995318 | Msa0210650:CDS | 40.0% | |
| CATTCATAGCAGTCGCAAAT+TGG | + | chr2_1:50995333-50995352 | None:intergenic | 40.0% | |
| CAATTTGCGACTGCTATGAA+TGG | - | chr2_1:50995331-50995350 | Msa0210650:CDS | 40.0% | |
| CCGTCAGTTATTACGGATAA+AGG | + | chr2_1:50995364-50995383 | None:intergenic | 40.0% | |
| TATGTGCTTGGCATCTTCTA+CGG | - | chr2_1:50995440-50995459 | Msa0210650:CDS | 40.0% | |
| GGAATGCATCATCGAATGTT+GGG | - | chr2_1:50995461-50995480 | Msa0210650:CDS | 40.0% | |
| AAGATGCATGTTGGGTGATA+TGG | - | chr2_1:50995510-50995529 | Msa0210650:CDS | 40.0% | |
| TGATCCAATTGTTGTCTTGC+AGG | + | chr2_1:50995585-50995604 | None:intergenic | 40.0% | |
| GAGGGTTTACATAGTCACAT+AGG | - | chr2_1:50995691-50995710 | Msa0210650:CDS | 40.0% | |
| ACCATAGTTGGAACGATAGT+CGG | + | chr2_1:50995806-50995825 | None:intergenic | 40.0% | |
| ! | CGCAAACTAGTTTGCAATAC+GGG | + | chr2_1:50995832-50995851 | None:intergenic | 40.0% |
| ! | AGCATCGAACCAGTTTACAA+GGG | - | chr2_1:50995867-50995886 | Msa0210650:CDS | 40.0% |
| CAAATGTTCGTGTCTTAGGA+TGG | - | chr2_1:50996047-50996066 | Msa0210650:CDS | 40.0% | |
| GTTCGAGCAAGATACACAAA+TGG | - | chr2_1:50996183-50996202 | Msa0210650:CDS | 40.0% | |
| GGGATTCTCAAATTGCTTCA+AGG | - | chr2_1:50996217-50996236 | Msa0210650:CDS | 40.0% | |
| CAAATTGCTTCAAGGTATGC+GGG | - | chr2_1:50996225-50996244 | Msa0210650:CDS | 40.0% | |
| GGGAATTATTCAGTTGTCGA+AGG | - | chr2_1:50996245-50996264 | Msa0210650:CDS | 40.0% | |
| TATTCAGTTGTCGAAGGATG+TGG | - | chr2_1:50996251-50996270 | Msa0210650:CDS | 40.0% | |
| GAGGGTTTATCAAGATGTAG+AGG | - | chr2_1:50996278-50996297 | Msa0210650:CDS | 40.0% | |
| !! | TTGGTATTGATGCTAGCACT+GGG | - | chr2_1:50996367-50996386 | Msa0210650:CDS | 40.0% |
| CTTTAGTCCTCACACAAGTA+GGG | + | chr2_1:50996428-50996447 | None:intergenic | 40.0% | |
| CTACTTGTGTGAGGACTAAA+GGG | - | chr2_1:50996427-50996446 | Msa0210650:CDS | 40.0% | |
| TCATGGTATGCAAGGGTAAA+CGG | - | chr2_1:50994560-50994579 | Msa0210650:CDS | 40.0% | |
| !! | GGGTAAACGGATTTTCTGTT+CGG | - | chr2_1:50994573-50994592 | Msa0210650:CDS | 40.0% |
| !! | GCAAACTTTTGTTTGTTCGC+GGG | - | chr2_1:50994637-50994656 | Msa0210650:CDS | 40.0% |
| GCTTCGAAACAATGTCTATG+TGG | + | chr2_1:50994757-50994776 | None:intergenic | 40.0% | |
| TAGACATTGTTTCGAAGCGT+TGG | - | chr2_1:50994759-50994778 | Msa0210650:CDS | 40.0% | |
| !! | TTGTTGGATGGTTTGCTATG+TGG | - | chr2_1:50994818-50994837 | Msa0210650:CDS | 40.0% |
| ! | TCAGGTGGTTTTCACAAGTT+AGG | - | chr2_1:50994950-50994969 | Msa0210650:CDS | 40.0% |
| !!! | AGAGGCTTGAACGTCTTTTT+TGG | - | chr2_1:50995116-50995135 | Msa0210650:CDS | 40.0% |
| !!! | GAACGTCTTTTTTGGTGTGA+TGG | - | chr2_1:50995124-50995143 | Msa0210650:CDS | 40.0% |
| TGGCCTTTGATGCAACTTAT+AGG | - | chr2_1:50995185-50995204 | Msa0210650:CDS | 40.0% | |
| !!! | TGCCCGTTTGTTATTTTCTC+CGG | - | chr2_1:50995223-50995242 | Msa0210650:CDS | 40.0% |
| CACCGGAGAAAATAACAAAC+GGG | + | chr2_1:50995228-50995247 | None:intergenic | 40.0% | |
| AGGTTTAGTTACGAGAGAGA+CGG | - | chr2_1:50995282-50995301 | Msa0210650:CDS | 40.0% | |
| AGACGGAAGAGACATATGTT+TGG | - | chr2_1:50995299-50995318 | Msa0210650:CDS | 40.0% | |
| CATTCATAGCAGTCGCAAAT+TGG | + | chr2_1:50995333-50995352 | None:intergenic | 40.0% | |
| CAATTTGCGACTGCTATGAA+TGG | - | chr2_1:50995331-50995350 | Msa0210650:CDS | 40.0% | |
| CCGTCAGTTATTACGGATAA+AGG | + | chr2_1:50995364-50995383 | None:intergenic | 40.0% | |
| TATGTGCTTGGCATCTTCTA+CGG | - | chr2_1:50995440-50995459 | Msa0210650:CDS | 40.0% | |
| GGAATGCATCATCGAATGTT+GGG | - | chr2_1:50995461-50995480 | Msa0210650:CDS | 40.0% | |
| AAGATGCATGTTGGGTGATA+TGG | - | chr2_1:50995510-50995529 | Msa0210650:CDS | 40.0% | |
| TGATCCAATTGTTGTCTTGC+AGG | + | chr2_1:50995585-50995604 | None:intergenic | 40.0% | |
| GAGGGTTTACATAGTCACAT+AGG | - | chr2_1:50995691-50995710 | Msa0210650:CDS | 40.0% | |
| ACCATAGTTGGAACGATAGT+CGG | + | chr2_1:50995806-50995825 | None:intergenic | 40.0% | |
| ! | CGCAAACTAGTTTGCAATAC+GGG | + | chr2_1:50995832-50995851 | None:intergenic | 40.0% |
| ! | AGCATCGAACCAGTTTACAA+GGG | - | chr2_1:50995867-50995886 | Msa0210650:CDS | 40.0% |
| CAAATGTTCGTGTCTTAGGA+TGG | - | chr2_1:50996047-50996066 | Msa0210650:CDS | 40.0% | |
| GTTCGAGCAAGATACACAAA+TGG | - | chr2_1:50996183-50996202 | Msa0210650:CDS | 40.0% | |
| GGGATTCTCAAATTGCTTCA+AGG | - | chr2_1:50996217-50996236 | Msa0210650:CDS | 40.0% | |
| CAAATTGCTTCAAGGTATGC+GGG | - | chr2_1:50996225-50996244 | Msa0210650:CDS | 40.0% | |
| GGGAATTATTCAGTTGTCGA+AGG | - | chr2_1:50996245-50996264 | Msa0210650:CDS | 40.0% | |
| TATTCAGTTGTCGAAGGATG+TGG | - | chr2_1:50996251-50996270 | Msa0210650:CDS | 40.0% | |
| GAGGGTTTATCAAGATGTAG+AGG | - | chr2_1:50996278-50996297 | Msa0210650:CDS | 40.0% | |
| !! | TTGGTATTGATGCTAGCACT+GGG | - | chr2_1:50996367-50996386 | Msa0210650:CDS | 40.0% |
| CTTTAGTCCTCACACAAGTA+GGG | + | chr2_1:50996428-50996447 | None:intergenic | 40.0% | |
| CTACTTGTGTGAGGACTAAA+GGG | - | chr2_1:50996427-50996446 | Msa0210650:CDS | 40.0% | |
| AATGGGGCTAATGAGTGTGA+TGG | - | chr2_1:50994380-50994399 | Msa0210650:CDS | 45.0% | |
| AGCGATTCATCCGAGTCTAA+TGG | - | chr2_1:50994419-50994438 | Msa0210650:CDS | 45.0% | |
| GCGATTCATCCGAGTCTAAT+GGG | - | chr2_1:50994420-50994439 | Msa0210650:CDS | 45.0% | |
| GCTGCAGAACATTACCCAAA+CGG | + | chr2_1:50994619-50994638 | None:intergenic | 45.0% | |
| !! | ACTTTTGTTTGTTCGCGGGA+AGG | - | chr2_1:50994641-50994660 | Msa0210650:CDS | 45.0% |
| !!! | GGAAGGTTTTAGAGAGGACA+GGG | - | chr2_1:50994658-50994677 | Msa0210650:CDS | 45.0% |
| !!! | GAAGGTTTTAGAGAGGACAG+GGG | - | chr2_1:50994659-50994678 | Msa0210650:CDS | 45.0% |
| GAGAACCCAGAAATGATACC+AGG | - | chr2_1:50994705-50994724 | Msa0210650:CDS | 45.0% | |
| CCACACCTGGTATCATTTCT+GGG | + | chr2_1:50994713-50994732 | None:intergenic | 45.0% | |
| TCCACACCTGGTATCATTTC+TGG | + | chr2_1:50994714-50994733 | None:intergenic | 45.0% | |
| ! | TTTTGCAGAACATCCACACC+TGG | + | chr2_1:50994726-50994745 | None:intergenic | 45.0% |
| CATAACCACGAGTTGTTGGA+TGG | - | chr2_1:50994806-50994825 | Msa0210650:CDS | 45.0% | |
| !! | GCTGTTAGCTTTCTATGTGC+CGG | + | chr2_1:50994851-50994870 | None:intergenic | 45.0% |
| GGTGCAATGGCTAATTCATC+AGG | - | chr2_1:50994932-50994951 | Msa0210650:CDS | 45.0% | |
| GCAATGGCTAATTCATCAGG+TGG | - | chr2_1:50994935-50994954 | Msa0210650:CDS | 45.0% | |
| CTGTCGCAAAGACAACAGTT+TGG | + | chr2_1:50995264-50995283 | None:intergenic | 45.0% | |
| CAAACTGTTGTCTTTGCGAC+AGG | - | chr2_1:50995262-50995281 | Msa0210650:CDS | 45.0% | |
| TGCGACTGCTATGAATGGTA+AGG | - | chr2_1:50995336-50995355 | Msa0210650:CDS | 45.0% | |
| CGGAATGCATCATCGAATGT+TGG | - | chr2_1:50995460-50995479 | Msa0210650:CDS | 45.0% | |
| ATGCATGTTGGGTGATATGG+AGG | - | chr2_1:50995513-50995532 | Msa0210650:CDS | 45.0% | |
| TTGGCCTGCAAGACAACAAT+TGG | - | chr2_1:50995578-50995597 | Msa0210650:CDS | 45.0% | |
| CAGGTATACGAACCACATCT+CGG | - | chr2_1:50995665-50995684 | Msa0210650:CDS | 45.0% | |
| TCCGACTATCGTTCCAACTA+TGG | - | chr2_1:50995802-50995821 | Msa0210650:CDS | 45.0% | |
| ! | CAATACGGGTTGACCATAGT+TGG | + | chr2_1:50995818-50995837 | None:intergenic | 45.0% |
| ! | CAGCATCGAACCAGTTTACA+AGG | - | chr2_1:50995866-50995885 | Msa0210650:CDS | 45.0% |
| !! | ACTGTGGAAATGGAAGTGTC+TGG | - | chr2_1:50995992-50996011 | Msa0210650:CDS | 45.0% |
| TGTCTTAGGATGGAGTCGTT+TGG | - | chr2_1:50996057-50996076 | Msa0210650:CDS | 45.0% | |
| GCATCAATACCAACAGCTGT+TGG | + | chr2_1:50996360-50996379 | None:intergenic | 45.0% | |
| !! | GTTGGTATTGATGCTAGCAC+TGG | - | chr2_1:50996366-50996385 | Msa0210650:CDS | 45.0% |
| !! | TGGTATTGATGCTAGCACTG+GGG | - | chr2_1:50996368-50996387 | Msa0210650:CDS | 45.0% |
| AGTCGTCGACGAAAGTTTAC+TGG | - | chr2_1:50996401-50996420 | Msa0210650:CDS | 45.0% | |
| CCTTTAGTCCTCACACAAGT+AGG | + | chr2_1:50996429-50996448 | None:intergenic | 45.0% | |
| CCTACTTGTGTGAGGACTAA+AGG | - | chr2_1:50996426-50996445 | Msa0210650:CDS | 45.0% | |
| ! | CCACACTGACTACATGATTG+AGG | + | chr2_1:50996495-50996514 | None:intergenic | 45.0% |
| CCTCAATCATGTAGTCAGTG+TGG | - | chr2_1:50996492-50996511 | Msa0210650:CDS | 45.0% | |
| TGTAGTCAGTGTGGTGTGAT+AGG | - | chr2_1:50996501-50996520 | Msa0210650:CDS | 45.0% | |
| AATGGGGCTAATGAGTGTGA+TGG | - | chr2_1:50994380-50994399 | Msa0210650:CDS | 45.0% | |
| AGCGATTCATCCGAGTCTAA+TGG | - | chr2_1:50994419-50994438 | Msa0210650:CDS | 45.0% | |
| GCGATTCATCCGAGTCTAAT+GGG | - | chr2_1:50994420-50994439 | Msa0210650:CDS | 45.0% | |
| GCTGCAGAACATTACCCAAA+CGG | + | chr2_1:50994619-50994638 | None:intergenic | 45.0% | |
| !! | ACTTTTGTTTGTTCGCGGGA+AGG | - | chr2_1:50994641-50994660 | Msa0210650:CDS | 45.0% |
| !!! | GGAAGGTTTTAGAGAGGACA+GGG | - | chr2_1:50994658-50994677 | Msa0210650:CDS | 45.0% |
| !!! | GAAGGTTTTAGAGAGGACAG+GGG | - | chr2_1:50994659-50994678 | Msa0210650:CDS | 45.0% |
| GAGAACCCAGAAATGATACC+AGG | - | chr2_1:50994705-50994724 | Msa0210650:CDS | 45.0% | |
| CCACACCTGGTATCATTTCT+GGG | + | chr2_1:50994713-50994732 | None:intergenic | 45.0% | |
| TCCACACCTGGTATCATTTC+TGG | + | chr2_1:50994714-50994733 | None:intergenic | 45.0% | |
| ! | TTTTGCAGAACATCCACACC+TGG | + | chr2_1:50994726-50994745 | None:intergenic | 45.0% |
| CATAACCACGAGTTGTTGGA+TGG | - | chr2_1:50994806-50994825 | Msa0210650:CDS | 45.0% | |
| !! | GCTGTTAGCTTTCTATGTGC+CGG | + | chr2_1:50994851-50994870 | None:intergenic | 45.0% |
| GGTGCAATGGCTAATTCATC+AGG | - | chr2_1:50994932-50994951 | Msa0210650:CDS | 45.0% | |
| GCAATGGCTAATTCATCAGG+TGG | - | chr2_1:50994935-50994954 | Msa0210650:CDS | 45.0% | |
| CTGTCGCAAAGACAACAGTT+TGG | + | chr2_1:50995264-50995283 | None:intergenic | 45.0% | |
| CAAACTGTTGTCTTTGCGAC+AGG | - | chr2_1:50995262-50995281 | Msa0210650:CDS | 45.0% | |
| TGCGACTGCTATGAATGGTA+AGG | - | chr2_1:50995336-50995355 | Msa0210650:CDS | 45.0% | |
| CGGAATGCATCATCGAATGT+TGG | - | chr2_1:50995460-50995479 | Msa0210650:CDS | 45.0% | |
| ATGCATGTTGGGTGATATGG+AGG | - | chr2_1:50995513-50995532 | Msa0210650:CDS | 45.0% | |
| TTGGCCTGCAAGACAACAAT+TGG | - | chr2_1:50995578-50995597 | Msa0210650:CDS | 45.0% | |
| CAGGTATACGAACCACATCT+CGG | - | chr2_1:50995665-50995684 | Msa0210650:CDS | 45.0% | |
| TCCGACTATCGTTCCAACTA+TGG | - | chr2_1:50995802-50995821 | Msa0210650:CDS | 45.0% | |
| ! | CAATACGGGTTGACCATAGT+TGG | + | chr2_1:50995818-50995837 | None:intergenic | 45.0% |
| ! | CAGCATCGAACCAGTTTACA+AGG | - | chr2_1:50995866-50995885 | Msa0210650:CDS | 45.0% |
| !! | ACTGTGGAAATGGAAGTGTC+TGG | - | chr2_1:50995992-50996011 | Msa0210650:CDS | 45.0% |
| TGTCTTAGGATGGAGTCGTT+TGG | - | chr2_1:50996057-50996076 | Msa0210650:CDS | 45.0% | |
| GCATCAATACCAACAGCTGT+TGG | + | chr2_1:50996360-50996379 | None:intergenic | 45.0% | |
| !! | GTTGGTATTGATGCTAGCAC+TGG | - | chr2_1:50996366-50996385 | Msa0210650:CDS | 45.0% |
| !! | TGGTATTGATGCTAGCACTG+GGG | - | chr2_1:50996368-50996387 | Msa0210650:CDS | 45.0% |
| AGTCGTCGACGAAAGTTTAC+TGG | - | chr2_1:50996401-50996420 | Msa0210650:CDS | 45.0% | |
| CCTTTAGTCCTCACACAAGT+AGG | + | chr2_1:50996429-50996448 | None:intergenic | 45.0% | |
| CCTACTTGTGTGAGGACTAA+AGG | - | chr2_1:50996426-50996445 | Msa0210650:CDS | 45.0% | |
| ! | CCACACTGACTACATGATTG+AGG | + | chr2_1:50996495-50996514 | None:intergenic | 45.0% |
| CCTCAATCATGTAGTCAGTG+TGG | - | chr2_1:50996492-50996511 | Msa0210650:CDS | 45.0% | |
| TGTAGTCAGTGTGGTGTGAT+AGG | - | chr2_1:50996501-50996520 | Msa0210650:CDS | 45.0% | |
| ATGGACGAAGCTTCAGACGA+AGG | - | chr2_1:50994341-50994360 | Msa0210650:CDS | 50.0% | |
| TTCGGAAGACCCAAGTTCTG+AGG | - | chr2_1:50994591-50994610 | Msa0210650:CDS | 50.0% | |
| ! | TCGGAAGACCCAAGTTCTGA+GGG | - | chr2_1:50994592-50994611 | Msa0210650:CDS | 50.0% |
| CAAACGGTCCCTCAGAACTT+GGG | + | chr2_1:50994603-50994622 | None:intergenic | 50.0% | |
| !! | CAAGTTCTGAGGGACCGTTT+GGG | - | chr2_1:50994602-50994621 | Msa0210650:CDS | 50.0% |
| !!! | TTCGCGGGAAGGTTTTAGAG+AGG | - | chr2_1:50994652-50994671 | Msa0210650:CDS | 50.0% |
| !!! | GGGAAGGTTTTAGAGAGGAC+AGG | - | chr2_1:50994657-50994676 | Msa0210650:CDS | 50.0% |
| CCCAGAAATGATACCAGGTG+TGG | - | chr2_1:50994710-50994729 | Msa0210650:CDS | 50.0% | |
| TGCGCATAACCACGAGTTGT+TGG | - | chr2_1:50994802-50994821 | Msa0210650:CDS | 50.0% | |
| GCAAACCATCCAACAACTCG+TGG | + | chr2_1:50994814-50994833 | None:intergenic | 50.0% | |
| TGGGCGACTGCTCATATCAA+AGG | - | chr2_1:50995631-50995650 | Msa0210650:CDS | 50.0% | |
| TAAACCCTCACACCGAGATG+TGG | + | chr2_1:50995680-50995699 | None:intergenic | 50.0% | |
| TACTGGACCCTACTTGTGTG+AGG | - | chr2_1:50996418-50996437 | Msa0210650:CDS | 50.0% | |
| TGTGTGAGGACTAAAGGGTG+TGG | - | chr2_1:50996432-50996451 | Msa0210650:CDS | 50.0% | |
| TCTAATCCAATTGCCACGCC+TGG | - | chr2_1:50996456-50996475 | Msa0210650:CDS | 50.0% | |
| ATGGACGAAGCTTCAGACGA+AGG | - | chr2_1:50994341-50994360 | Msa0210650:CDS | 50.0% | |
| TTCGGAAGACCCAAGTTCTG+AGG | - | chr2_1:50994591-50994610 | Msa0210650:CDS | 50.0% | |
| ! | TCGGAAGACCCAAGTTCTGA+GGG | - | chr2_1:50994592-50994611 | Msa0210650:CDS | 50.0% |
| CAAACGGTCCCTCAGAACTT+GGG | + | chr2_1:50994603-50994622 | None:intergenic | 50.0% | |
| !! | CAAGTTCTGAGGGACCGTTT+GGG | - | chr2_1:50994602-50994621 | Msa0210650:CDS | 50.0% |
| !!! | TTCGCGGGAAGGTTTTAGAG+AGG | - | chr2_1:50994652-50994671 | Msa0210650:CDS | 50.0% |
| !!! | GGGAAGGTTTTAGAGAGGAC+AGG | - | chr2_1:50994657-50994676 | Msa0210650:CDS | 50.0% |
| CCCAGAAATGATACCAGGTG+TGG | - | chr2_1:50994710-50994729 | Msa0210650:CDS | 50.0% | |
| TGCGCATAACCACGAGTTGT+TGG | - | chr2_1:50994802-50994821 | Msa0210650:CDS | 50.0% | |
| GCAAACCATCCAACAACTCG+TGG | + | chr2_1:50994814-50994833 | None:intergenic | 50.0% | |
| TGGGCGACTGCTCATATCAA+AGG | - | chr2_1:50995631-50995650 | Msa0210650:CDS | 50.0% | |
| TAAACCCTCACACCGAGATG+TGG | + | chr2_1:50995680-50995699 | None:intergenic | 50.0% | |
| TACTGGACCCTACTTGTGTG+AGG | - | chr2_1:50996418-50996437 | Msa0210650:CDS | 50.0% | |
| TGTGTGAGGACTAAAGGGTG+TGG | - | chr2_1:50996432-50996451 | Msa0210650:CDS | 50.0% | |
| TCTAATCCAATTGCCACGCC+TGG | - | chr2_1:50996456-50996475 | Msa0210650:CDS | 50.0% | |
| CCAAACGGTCCCTCAGAACT+TGG | + | chr2_1:50994604-50994623 | None:intergenic | 55.0% | |
| !! | CCAAGTTCTGAGGGACCGTT+TGG | - | chr2_1:50994601-50994620 | Msa0210650:CDS | 55.0% |
| AGAGGACAGGGGATTGACCT+TGG | - | chr2_1:50994670-50994689 | Msa0210650:CDS | 55.0% | |
| ACAGGGGATTGACCTTGGAG+AGG | - | chr2_1:50994675-50994694 | Msa0210650:CDS | 55.0% | |
| ! | ACGAACCACATCTCGGTGTG+AGG | - | chr2_1:50995672-50995691 | Msa0210650:CDS | 55.0% |
| ! | CGAACCACATCTCGGTGTGA+GGG | - | chr2_1:50995673-50995692 | Msa0210650:CDS | 55.0% |
| TGTCGAAGGATGTGGCTGAG+AGG | - | chr2_1:50996259-50996278 | Msa0210650:CDS | 55.0% | |
| GTCGAAGGATGTGGCTGAGA+GGG | - | chr2_1:50996260-50996279 | Msa0210650:CDS | 55.0% | |
| AATCCAATTGCCACGCCTGG+TGG | - | chr2_1:50996459-50996478 | Msa0210650:CDS | 55.0% | |
| CCAAACGGTCCCTCAGAACT+TGG | + | chr2_1:50994604-50994623 | None:intergenic | 55.0% | |
| !! | CCAAGTTCTGAGGGACCGTT+TGG | - | chr2_1:50994601-50994620 | Msa0210650:CDS | 55.0% |
| AGAGGACAGGGGATTGACCT+TGG | - | chr2_1:50994670-50994689 | Msa0210650:CDS | 55.0% | |
| ACAGGGGATTGACCTTGGAG+AGG | - | chr2_1:50994675-50994694 | Msa0210650:CDS | 55.0% | |
| ! | ACGAACCACATCTCGGTGTG+AGG | - | chr2_1:50995672-50995691 | Msa0210650:CDS | 55.0% |
| ! | CGAACCACATCTCGGTGTGA+GGG | - | chr2_1:50995673-50995692 | Msa0210650:CDS | 55.0% |
| TGTCGAAGGATGTGGCTGAG+AGG | - | chr2_1:50996259-50996278 | Msa0210650:CDS | 55.0% | |
| GTCGAAGGATGTGGCTGAGA+GGG | - | chr2_1:50996260-50996279 | Msa0210650:CDS | 55.0% | |
| AATCCAATTGCCACGCCTGG+TGG | - | chr2_1:50996459-50996478 | Msa0210650:CDS | 55.0% | |
| GGGGATTGACCTTGGAGAGG+CGG | - | chr2_1:50994678-50994697 | Msa0210650:CDS | 60.0% | |
| TTCTCGCTTCCGCCTCTCCA+AGG | + | chr2_1:50994690-50994709 | None:intergenic | 60.0% | |
| CTTCCACCAGGCGTGGCAAT+TGG | + | chr2_1:50996465-50996484 | None:intergenic | 60.0% | |
| TTGCCACGCCTGGTGGAAGT+AGG | - | chr2_1:50996466-50996485 | Msa0210650:CDS | 60.0% | |
| TGAGGACGCCTACTTCCACC+AGG | + | chr2_1:50996477-50996496 | None:intergenic | 60.0% | |
| GGGGATTGACCTTGGAGAGG+CGG | - | chr2_1:50994678-50994697 | Msa0210650:CDS | 60.0% | |
| TTCTCGCTTCCGCCTCTCCA+AGG | + | chr2_1:50994690-50994709 | None:intergenic | 60.0% | |
| CTTCCACCAGGCGTGGCAAT+TGG | + | chr2_1:50996465-50996484 | None:intergenic | 60.0% | |
| TTGCCACGCCTGGTGGAAGT+AGG | - | chr2_1:50996466-50996485 | Msa0210650:CDS | 60.0% | |
| TGAGGACGCCTACTTCCACC+AGG | + | chr2_1:50996477-50996496 | None:intergenic | 60.0% | |
| ACGCCTACTTCCACCAGGCG+TGG | + | chr2_1:50996472-50996491 | None:intergenic | 65.0% | |
| ACGCCTACTTCCACCAGGCG+TGG | + | chr2_1:50996472-50996491 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 50994284 | 50996638 | 50994284 | ID=Msa0210650;Name=Msa0210650 |
| chr2_1 | mRNA | 50994284 | 50996638 | 50994284 | ID=Msa0210650-mRNA-1;Parent=Msa0210650;Name=Msa0210650-mRNA-1;_AED=0.08;_eAED=0.09;_QI=0|-1|0|1|-1|1|1|0|784 |
| chr2_1 | exon | 50994284 | 50996638 | 50994284 | ID=Msa0210650-mRNA-1:exon:14160;Parent=Msa0210650-mRNA-1 |
| chr2_1 | CDS | 50994284 | 50996638 | 50994284 | ID=Msa0210650-mRNA-1:cds;Parent=Msa0210650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
