Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289850 | GAU20217.1 | 65.110 | 728 | 247 | 3 | 31 | 753 | 3 | 728 | 0.0 | 1031 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289850 | sp|Q9SZL8|FRS5_ARATH | 30.420 | 572 | 386 | 7 | 72 | 634 | 69 | 637 | 2.59e-91 | 306 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289850 | A0A445I407 | 50.393 | 764 | 367 | 5 | 6 | 768 | 61 | 813 | 0.0 | 803 |
Gene ID | Type | Classification |
---|---|---|
Msa0289850 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0210650 | Msa0289850 | 0.999559 | 1.037538e-322 | -8.615850e-47 |
Msa0210700 | Msa0289850 | 0.961682 | 5.500835e-120 | -8.615850e-47 |
Msa0279920 | Msa0289850 | 0.988332 | 1.317996e-173 | -8.615850e-47 |
Msa0289850 | Msa0728840 | 0.852378 | 4.802672e-61 | -8.615850e-47 |
Msa0289850 | Msa0777700 | 0.866049 | 3.786274e-65 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289850 | MtrunA17_Chr1g0203051 | 44.444 | 603 | 322 | 4 | 26 | 618 | 22 | 621 | 0.0 | 570 |
Msa0289850 | MtrunA17_Chr2g0287651 | 35.123 | 689 | 435 | 5 | 67 | 753 | 66 | 744 | 4.54e-148 | 456 |
Msa0289850 | MtrunA17_Chr2g0308841 | 70.354 | 226 | 67 | 0 | 405 | 630 | 1 | 226 | 6.49e-120 | 361 |
Msa0289850 | MtrunA17_Chr5g0448761 | 31.866 | 568 | 375 | 6 | 78 | 634 | 62 | 628 | 3.41e-99 | 325 |
Msa0289850 | MtrunA17_Chr1g0202341 | 31.327 | 565 | 375 | 6 | 74 | 630 | 49 | 608 | 6.19e-97 | 316 |
Msa0289850 | MtrunA17_Chr2g0324011 | 30.054 | 559 | 374 | 7 | 82 | 630 | 16 | 567 | 5.97e-85 | 281 |
Msa0289850 | MtrunA17_Chr8g0363841 | 29.735 | 565 | 384 | 7 | 86 | 641 | 27 | 587 | 6.40e-80 | 270 |
Msa0289850 | MtrunA17_Chr1g0198761 | 27.865 | 768 | 505 | 20 | 30 | 768 | 1 | 748 | 4.82e-79 | 270 |
Msa0289850 | MtrunA17_Chr1g0203721 | 27.812 | 640 | 412 | 14 | 14 | 630 | 10 | 622 | 3.70e-78 | 270 |
Msa0289850 | MtrunA17_Chr5g0441581 | 26.412 | 655 | 426 | 15 | 82 | 703 | 38 | 669 | 9.46e-75 | 256 |
Msa0289850 | MtrunA17_Chr2g0287061 | 30.629 | 604 | 344 | 18 | 52 | 634 | 155 | 704 | 3.77e-72 | 251 |
Msa0289850 | MtrunA17_Chr6g0458391 | 28.475 | 590 | 371 | 13 | 60 | 630 | 207 | 764 | 5.22e-72 | 250 |
Msa0289850 | MtrunA17_Chr6g0458391 | 32.540 | 126 | 74 | 4 | 81 | 202 | 96 | 214 | 8.37e-13 | 72.0 |
Msa0289850 | MtrunA17_Chr2g0296781 | 28.116 | 658 | 423 | 16 | 91 | 722 | 12 | 645 | 2.34e-71 | 248 |
Msa0289850 | MtrunA17_Chr5g0440451 | 27.697 | 621 | 401 | 13 | 82 | 675 | 49 | 648 | 8.76e-69 | 244 |
Msa0289850 | MtrunA17_Chr5g0448511 | 30.227 | 397 | 262 | 4 | 240 | 627 | 3 | 393 | 3.23e-67 | 232 |
Msa0289850 | MtrunA17_Chr3g0118611 | 29.581 | 453 | 307 | 6 | 232 | 675 | 96 | 545 | 5.30e-65 | 231 |
Msa0289850 | MtrunA17_Chr1g0207551 | 28.393 | 560 | 381 | 12 | 81 | 630 | 39 | 588 | 1.26e-64 | 231 |
Msa0289850 | MtrunA17_Chr6g0477261 | 30.243 | 453 | 295 | 8 | 201 | 639 | 4 | 449 | 7.63e-64 | 226 |
Msa0289850 | MtrunA17_Chr3g0082121 | 26.557 | 610 | 402 | 14 | 45 | 630 | 2 | 589 | 3.34e-63 | 224 |
Msa0289850 | MtrunA17_Chr3g0080351 | 26.400 | 625 | 410 | 15 | 26 | 630 | 28 | 622 | 1.32e-61 | 223 |
Msa0289850 | MtrunA17_Chr5g0431001 | 31.265 | 419 | 263 | 8 | 82 | 480 | 67 | 480 | 6.91e-60 | 211 |
Msa0289850 | MtrunA17_Chr2g0329031 | 25.284 | 704 | 477 | 18 | 69 | 747 | 7 | 686 | 2.30e-59 | 214 |
Msa0289850 | MtrunA17_Chr2g0276841 | 27.586 | 580 | 372 | 16 | 82 | 635 | 76 | 633 | 2.02e-58 | 211 |
Msa0289850 | MtrunA17_Chr2g0291581 | 24.042 | 574 | 379 | 13 | 81 | 628 | 76 | 618 | 5.62e-55 | 201 |
Msa0289850 | MtrunA17_Chr1g0196541 | 29.197 | 411 | 276 | 5 | 239 | 639 | 155 | 560 | 2.84e-54 | 200 |
Msa0289850 | MtrunA17_Chr2g0290391 | 25.561 | 669 | 432 | 17 | 24 | 666 | 23 | 651 | 1.23e-53 | 197 |
Msa0289850 | MtrunA17_Chr2g0291591 | 27.013 | 559 | 344 | 13 | 8 | 545 | 16 | 531 | 4.39e-53 | 193 |
Msa0289850 | MtrunA17_Chr2g0294841 | 26.458 | 703 | 454 | 23 | 49 | 715 | 11 | 686 | 3.48e-50 | 188 |
Msa0289850 | MtrunA17_Chr1g0164591 | 26.923 | 312 | 216 | 3 | 157 | 463 | 3 | 307 | 9.28e-37 | 141 |
Msa0289850 | MtrunA17_Chr8g0389811 | 37.989 | 179 | 99 | 1 | 9 | 187 | 29 | 195 | 2.23e-35 | 133 |
Msa0289850 | MtrunA17_Chr1g0171741 | 41.104 | 163 | 93 | 2 | 40 | 202 | 99 | 258 | 2.21e-34 | 132 |
Msa0289850 | MtrunA17_Chr2g0331371 | 48.592 | 142 | 69 | 1 | 40 | 181 | 23 | 160 | 2.62e-33 | 127 |
Msa0289850 | MtrunA17_Chr7g0258861 | 28.716 | 296 | 199 | 6 | 75 | 364 | 11 | 300 | 2.92e-33 | 130 |
Msa0289850 | MtrunA17_Chr6g0473421 | 46.429 | 112 | 56 | 1 | 40 | 151 | 23 | 130 | 1.97e-26 | 105 |
Msa0289850 | MtrunA17_Chr1g0172931 | 45.192 | 104 | 57 | 0 | 55 | 158 | 55 | 158 | 3.44e-25 | 102 |
Msa0289850 | MtrunA17_Chr8g0340801 | 40.000 | 105 | 63 | 0 | 187 | 291 | 1 | 105 | 8.90e-23 | 94.0 |
Msa0289850 | MtrunA17_Chr1g0193171 | 21.554 | 399 | 246 | 14 | 237 | 612 | 304 | 658 | 1.50e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289850 | AT4G38180.1 | 30.420 | 572 | 386 | 7 | 72 | 634 | 69 | 637 | 2.63e-92 | 306 |
Msa0289850 | AT3G06250.2 | 29.749 | 558 | 337 | 12 | 80 | 630 | 194 | 703 | 1.32e-72 | 253 |
Msa0289850 | AT3G06250.1 | 29.749 | 558 | 337 | 12 | 80 | 630 | 194 | 703 | 1.32e-72 | 253 |
Msa0289850 | AT3G06250.3 | 29.749 | 558 | 337 | 12 | 80 | 630 | 194 | 703 | 1.32e-72 | 253 |
Msa0289850 | AT5G18960.2 | 29.537 | 562 | 336 | 14 | 80 | 630 | 215 | 727 | 7.13e-71 | 248 |
Msa0289850 | AT5G18960.1 | 29.537 | 562 | 336 | 14 | 80 | 630 | 215 | 727 | 7.13e-71 | 248 |
Msa0289850 | AT3G22170.2 | 25.872 | 688 | 449 | 16 | 22 | 684 | 14 | 665 | 1.71e-69 | 245 |
Msa0289850 | AT3G22170.1 | 25.872 | 688 | 449 | 16 | 22 | 684 | 14 | 665 | 1.71e-69 | 245 |
Msa0289850 | AT4G15090.1 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
Msa0289850 | AT4G15090.5 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
Msa0289850 | AT4G15090.3 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
Msa0289850 | AT4G15090.2 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
Msa0289850 | AT4G15090.4 | 26.821 | 604 | 424 | 10 | 81 | 675 | 56 | 650 | 3.90e-68 | 241 |
Msa0289850 | AT2G27110.2 | 26.594 | 643 | 426 | 12 | 39 | 675 | 20 | 622 | 4.61e-65 | 233 |
Msa0289850 | AT2G27110.1 | 26.594 | 643 | 426 | 12 | 39 | 675 | 20 | 622 | 4.61e-65 | 233 |
Msa0289850 | AT1G76320.3 | 28.571 | 560 | 372 | 11 | 81 | 630 | 2 | 543 | 1.55e-62 | 223 |
Msa0289850 | AT1G76320.1 | 28.571 | 560 | 372 | 11 | 81 | 630 | 2 | 543 | 2.77e-62 | 223 |
Msa0289850 | AT1G76320.4 | 28.571 | 560 | 372 | 11 | 81 | 630 | 2 | 543 | 2.77e-62 | 223 |
Msa0289850 | AT1G76320.2 | 28.571 | 560 | 372 | 11 | 81 | 630 | 2 | 543 | 2.94e-62 | 223 |
Msa0289850 | AT2G27110.3 | 28.146 | 437 | 305 | 4 | 244 | 675 | 45 | 477 | 1.83e-61 | 220 |
Msa0289850 | AT1G10240.2 | 28.916 | 581 | 381 | 16 | 82 | 644 | 54 | 620 | 1.55e-60 | 217 |
Msa0289850 | AT1G10240.1 | 28.916 | 581 | 381 | 16 | 82 | 644 | 54 | 620 | 1.55e-60 | 217 |
Msa0289850 | AT1G80010.1 | 29.131 | 587 | 375 | 17 | 81 | 641 | 100 | 671 | 1.38e-57 | 210 |
Msa0289850 | AT2G32250.5 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 8.53e-57 | 208 |
Msa0289850 | AT2G32250.7 | 26.895 | 554 | 353 | 11 | 81 | 628 | 2 | 509 | 1.37e-56 | 207 |
Msa0289850 | AT2G32250.2 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.38e-56 | 208 |
Msa0289850 | AT2G32250.4 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.38e-56 | 208 |
Msa0289850 | AT2G32250.8 | 26.895 | 554 | 353 | 11 | 81 | 628 | 2 | 509 | 1.46e-56 | 207 |
Msa0289850 | AT2G32250.6 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.65e-56 | 208 |
Msa0289850 | AT2G32250.1 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.65e-56 | 208 |
Msa0289850 | AT2G32250.3 | 26.895 | 554 | 353 | 11 | 81 | 628 | 43 | 550 | 1.65e-56 | 208 |
Msa0289850 | AT1G52520.1 | 26.587 | 583 | 356 | 16 | 81 | 628 | 90 | 635 | 6.06e-54 | 199 |
Msa0289850 | AT4G19990.5 | 25.346 | 651 | 421 | 14 | 68 | 695 | 13 | 621 | 8.13e-52 | 193 |
Msa0289850 | AT4G19990.6 | 25.424 | 649 | 423 | 14 | 68 | 695 | 13 | 621 | 9.98e-52 | 194 |
Msa0289850 | AT4G19990.2 | 25.424 | 649 | 423 | 14 | 68 | 695 | 13 | 621 | 9.98e-52 | 194 |
Msa0289850 | AT4G19990.7 | 25.346 | 651 | 421 | 14 | 68 | 695 | 27 | 635 | 1.01e-51 | 193 |
Msa0289850 | AT4G19990.3 | 25.346 | 651 | 421 | 14 | 68 | 695 | 13 | 621 | 1.02e-51 | 193 |
Msa0289850 | AT4G19990.4 | 25.346 | 651 | 421 | 14 | 68 | 695 | 13 | 621 | 1.02e-51 | 193 |
Msa0289850 | AT4G38170.1 | 27.297 | 370 | 259 | 4 | 283 | 643 | 46 | 414 | 1.82e-50 | 186 |
Msa0289850 | AT5G28530.1 | 26.186 | 569 | 383 | 14 | 82 | 626 | 61 | 616 | 1.57e-48 | 183 |
Msa0289850 | AT5G28530.3 | 26.011 | 569 | 380 | 14 | 82 | 626 | 61 | 612 | 1.92e-48 | 182 |
Msa0289850 | AT5G28530.2 | 26.011 | 569 | 380 | 14 | 82 | 626 | 61 | 612 | 1.92e-48 | 182 |
Msa0289850 | AT4G19990.1 | 25.373 | 603 | 388 | 13 | 114 | 695 | 3 | 564 | 1.30e-47 | 181 |
Msa0289850 | AT5G28530.4 | 24.194 | 558 | 345 | 16 | 82 | 626 | 61 | 553 | 5.03e-31 | 129 |
Msa0289850 | AT5G28530.5 | 24.014 | 558 | 342 | 16 | 82 | 626 | 61 | 549 | 5.36e-31 | 129 |
Find 153 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCACACCTGGTATCATTTC+TGG | 0.155992 | 2_3:+36259473 | None:intergenic |
ACACAAATGGTTCACAATAT+TGG | 0.219824 | 2_3:-36257988 | Msa0289850:CDS |
CACAAATGGTTCACAATATT+GGG | 0.257023 | 2_3:-36257987 | Msa0289850:CDS |
CATAATCTATGATGTGCTTT+TGG | 0.261343 | 2_3:+36258763 | None:intergenic |
TGGCCTTTGATGCAACTTAT+AGG | 0.268825 | 2_3:-36258999 | Msa0289850:CDS |
TGATCCAATTGTTGTCTTGC+AGG | 0.279613 | 2_3:+36258602 | None:intergenic |
TGAATAAGTTTGAAGAACTA+TGG | 0.283312 | 2_3:-36258648 | Msa0289850:CDS |
TCAAAGTTGTTGACTCCTTT+AGG | 0.283568 | 2_3:+36257641 | None:intergenic |
ATTTCAAATGTTCGTGTCTT+AGG | 0.296750 | 2_3:-36258141 | Msa0289850:CDS |
GGGAATGCTATAGTCATAAA+TGG | 0.304640 | 2_3:-36259744 | Msa0289850:CDS |
AAGATGCATGTTGGGTGATA+TGG | 0.328276 | 2_3:-36258674 | Msa0289850:CDS |
GTATGTGCAACATACATTAA+AGG | 0.333195 | 2_3:+36259105 | None:intergenic |
CCTGTGTAAAACTAGATTCT+TGG | 0.335728 | 2_3:+36258048 | None:intergenic |
CCGTCAGTTATTACGGATAA+AGG | 0.344378 | 2_3:+36258823 | None:intergenic |
TCCGACTATCGTTCCAACTA+TGG | 0.344499 | 2_3:-36258382 | Msa0289850:CDS |
ATTGCACCATACGTTTGATA+TGG | 0.351243 | 2_3:+36259267 | None:intergenic |
CCAAGTTCTGAGGGACCGTT+TGG | 0.359223 | 2_3:-36259583 | Msa0289850:CDS |
AACATCACCGTCAGTTATTA+CGG | 0.364947 | 2_3:+36258816 | None:intergenic |
CTTCCACCAGGCGTGGCAAT+TGG | 0.369060 | 2_3:+36257722 | None:intergenic |
CGCAAACTAGTTTGCAATAC+GGG | 0.372515 | 2_3:+36258355 | None:intergenic |
CAATATTAACATCGAGGAAA+TGG | 0.372866 | 2_3:-36259862 | Msa0289850:CDS |
ATTTCCTTTGTCTTCCTGAT+TGG | 0.374974 | 2_3:+36259187 | None:intergenic |
CCAAACGGTCCCTCAGAACT+TGG | 0.376804 | 2_3:+36259583 | None:intergenic |
TTCAGACGAAGGAGATAATA+TGG | 0.381516 | 2_3:-36259832 | Msa0289850:CDS |
TTGGCCTGCAAGACAACAAT+TGG | 0.382041 | 2_3:-36258606 | Msa0289850:CDS |
GTTTCAAAGTACTGTGGAAA+TGG | 0.394957 | 2_3:-36258202 | Msa0289850:CDS |
TGAAGAACTATGGGAAGAAA+TGG | 0.400015 | 2_3:-36258638 | Msa0289850:CDS |
CATTCATAGCAGTCGCAAAT+TGG | 0.400483 | 2_3:+36258854 | None:intergenic |
CCACACCTGGTATCATTTCT+GGG | 0.408982 | 2_3:+36259474 | None:intergenic |
TAAGGCATCTATGAAATTGC+TGG | 0.409527 | 2_3:+36258431 | None:intergenic |
AGCGATTCATCCGAGTCTAA+TGG | 0.410491 | 2_3:-36259765 | Msa0289850:CDS |
AGAAAATCTCCCTTGTAAAC+TGG | 0.412206 | 2_3:+36258308 | None:intergenic |
CAATACGGGTTGACCATAGT+TGG | 0.415017 | 2_3:+36258369 | None:intergenic |
AGTCGTCGACGAAAGTTTAC+TGG | 0.423532 | 2_3:-36257783 | Msa0289850:CDS |
TTTAAGATATGACATGAAAT+CGG | 0.425674 | 2_3:+36258696 | None:intergenic |
TCATGGTATGCAAGGGTAAA+CGG | 0.428944 | 2_3:-36259624 | Msa0289850:CDS |
TATGTGCAACATACATTAAA+GGG | 0.429560 | 2_3:+36259106 | None:intergenic |
TGCGCATAACCACGAGTTGT+TGG | 0.433550 | 2_3:-36259382 | Msa0289850:CDS |
AAGGATTTGTATAACCAATC+AGG | 0.433589 | 2_3:-36259201 | Msa0289850:CDS |
CACATCATAGATTATGTGCT+TGG | 0.435520 | 2_3:-36258756 | Msa0289850:CDS |
GAGATAATATGGATGACAAT+GGG | 0.436783 | 2_3:-36259821 | Msa0289850:CDS |
GGGATTCTCAAATTGCTTCA+AGG | 0.437802 | 2_3:-36257967 | Msa0289850:CDS |
CTGTGTAAAACTAGATTCTT+GGG | 0.438174 | 2_3:+36258049 | None:intergenic |
CCTACTTGTGTGAGGACTAA+AGG | 0.444636 | 2_3:-36257758 | Msa0289850:CDS |
AGAGACATATGTTTGGTTGT+TGG | 0.446496 | 2_3:-36258878 | Msa0289850:CDS |
CTACTTGTGTGAGGACTAAA+GGG | 0.449197 | 2_3:-36257757 | Msa0289850:CDS |
GCGATTCATCCGAGTCTAAT+GGG | 0.449731 | 2_3:-36259764 | Msa0289850:CDS |
TGTCTTAGGATGGAGTCGTT+TGG | 0.452899 | 2_3:-36258127 | Msa0289850:CDS |
TATCTTAAAAGATGCATGTT+GGG | 0.464075 | 2_3:-36258682 | Msa0289850:CDS |
CAAACTGTTGTCTTTGCGAC+AGG | 0.466297 | 2_3:-36258922 | Msa0289850:CDS |
CTCGAAATCGAAAATATGTA+AGG | 0.466417 | 2_3:+36258413 | None:intergenic |
TATGTGCTTGGCATCTTCTA+CGG | 0.467035 | 2_3:-36258744 | Msa0289850:CDS |
CACGAACATTTGAAATCTAC+AGG | 0.467229 | 2_3:+36258148 | None:intergenic |
AAATTAGTTTCATCTGACTT+TGG | 0.470983 | 2_3:-36259168 | Msa0289850:CDS |
AGACGGAAGAGACATATGTT+TGG | 0.472860 | 2_3:-36258885 | Msa0289850:CDS |
CGGAATGCATCATCGAATGT+TGG | 0.473100 | 2_3:-36258724 | Msa0289850:CDS |
TTTCCTATAAGTTGCATCAA+AGG | 0.473501 | 2_3:+36258996 | None:intergenic |
TGTAGTCAGTGTGGTGTGAT+AGG | 0.474905 | 2_3:-36257683 | Msa0289850:CDS |
TATTCAGTTGTCGAAGGATG+TGG | 0.485194 | 2_3:-36257933 | Msa0289850:CDS |
GTTGGTATTGATGCTAGCAC+TGG | 0.485843 | 2_3:-36257818 | Msa0289850:CDS |
ATACTGTAGACAAAGATAAG+AGG | 0.486855 | 2_3:-36259086 | Msa0289850:CDS |
GGAATGCATCATCGAATGTT+GGG | 0.488653 | 2_3:-36258723 | Msa0289850:CDS |
CCTTTAGTCCTCACACAAGT+AGG | 0.488782 | 2_3:+36257758 | None:intergenic |
TTCTCGCTTCCGCCTCTCCA+AGG | 0.489867 | 2_3:+36259497 | None:intergenic |
CAGCATCGAACCAGTTTACA+AGG | 0.491061 | 2_3:-36258318 | Msa0289850:CDS |
GGTGCAATGGCTAATTCATC+AGG | 0.491612 | 2_3:-36259252 | Msa0289850:CDS |
TTGCATATAATTTCTACTCA+TGG | 0.494106 | 2_3:-36259641 | Msa0289850:CDS |
AGAGGACAGGGGATTGACCT+TGG | 0.494325 | 2_3:-36259514 | Msa0289850:CDS |
TTAGTTTCATCTGACTTTGG+CGG | 0.496753 | 2_3:-36259165 | Msa0289850:CDS |
ATTGAAAAGTATAAGAATGT+TGG | 0.500015 | 2_3:-36259297 | Msa0289850:CDS |
TCGCAAACTAGTTTGCAATA+CGG | 0.502777 | 2_3:+36258354 | None:intergenic |
CACCGGAGAAAATAACAAAC+GGG | 0.508832 | 2_3:+36258959 | None:intergenic |
CAAATTGCTTCAAGGTATGC+GGG | 0.516691 | 2_3:-36257959 | Msa0289850:CDS |
TTGCCACGCCTGGTGGAAGT+AGG | 0.517312 | 2_3:-36257718 | Msa0289850:CDS |
CAAATGTTCGTGTCTTAGGA+TGG | 0.523067 | 2_3:-36258137 | Msa0289850:CDS |
AATAAACGATCATGTCCTAA+AGG | 0.523227 | 2_3:-36257656 | Msa0289850:CDS |
ATTAATGAAGATGATGAAGA+AGG | 0.525000 | 2_3:-36257584 | Msa0289850:CDS |
GTCGAAGGATGTGGCTGAGA+GGG | 0.529678 | 2_3:-36257924 | Msa0289850:CDS |
CATAACCACGAGTTGTTGGA+TGG | 0.530438 | 2_3:-36259378 | Msa0289850:CDS |
ACACCGGAGAAAATAACAAA+CGG | 0.530564 | 2_3:+36258958 | None:intergenic |
GAATAAGTTTGAAGAACTAT+GGG | 0.530569 | 2_3:-36258647 | Msa0289850:CDS |
ATTTCTACTCATGGTATGCA+AGG | 0.531446 | 2_3:-36259632 | Msa0289850:CDS |
CTGTCGCAAAGACAACAGTT+TGG | 0.533935 | 2_3:+36258923 | None:intergenic |
TCTAATCCAATTGCCACGCC+TGG | 0.535553 | 2_3:-36257728 | Msa0289850:CDS |
TAGACATTGTTTCGAAGCGT+TGG | 0.536274 | 2_3:-36259425 | Msa0289850:CDS |
GCTGTTAGCTTTCTATGTGC+CGG | 0.541367 | 2_3:+36259336 | None:intergenic |
CAAGTTCTGAGGGACCGTTT+GGG | 0.542763 | 2_3:-36259582 | Msa0289850:CDS |
AATCCAATTGCCACGCCTGG+TGG | 0.547004 | 2_3:-36257725 | Msa0289850:CDS |
GTTATGCGCAAATTCAAATA+CGG | 0.547080 | 2_3:+36259395 | None:intergenic |
TTGGTATTGATGCTAGCACT+GGG | 0.551813 | 2_3:-36257817 | Msa0289850:CDS |
TTGTTGGATGGTTTGCTATG+TGG | 0.558740 | 2_3:-36259366 | Msa0289850:CDS |
CAATTTGCGACTGCTATGAA+TGG | 0.559494 | 2_3:-36258853 | Msa0289850:CDS |
TCTATTGTAGGTTATGGAGG+AGG | 0.559706 | 2_3:-36259913 | None:intergenic |
GCATCAATACCAACAGCTGT+TGG | 0.560993 | 2_3:+36257827 | None:intergenic |
GCTGCAGAACATTACCCAAA+CGG | 0.563552 | 2_3:+36259568 | None:intergenic |
TGAAATTCAAGAGATGTCCA+TGG | 0.566346 | 2_3:-36258239 | Msa0289850:CDS |
GTTCGAGCAAGATACACAAA+TGG | 0.566756 | 2_3:-36258001 | Msa0289850:CDS |
TGCGACTGCTATGAATGGTA+AGG | 0.571209 | 2_3:-36258848 | Msa0289850:CDS |
AAGAATAAACCAACAGCTGT+TGG | 0.571265 | 2_3:-36257836 | Msa0289850:CDS |
GGAGATAATATGGATGACAA+TGG | 0.571879 | 2_3:-36259822 | Msa0289850:CDS |
TTCGGAAGACCCAAGTTCTG+AGG | 0.573488 | 2_3:-36259593 | Msa0289850:CDS |
TCAAATTGCTTCAAGGTATG+CGG | 0.574162 | 2_3:-36257960 | Msa0289850:CDS |
TTTCTGTAGATGTAGTTGAA+AGG | 0.575027 | 2_3:-36259686 | Msa0289850:CDS |
ATATCAAACGTATGGTGCAA+TGG | 0.580935 | 2_3:-36259265 | Msa0289850:CDS |
CTTTAGTCCTCACACAAGTA+GGG | 0.582163 | 2_3:+36257759 | None:intergenic |
GGGGATTGACCTTGGAGAGG+CGG | 0.582190 | 2_3:-36259506 | Msa0289850:CDS |
CCACACTGACTACATGATTG+AGG | 0.582317 | 2_3:+36257692 | None:intergenic |
GAGAACCCAGAAATGATACC+AGG | 0.586155 | 2_3:-36259479 | Msa0289850:CDS |
GTAAGACCATATCAAACGTA+TGG | 0.586746 | 2_3:-36259273 | Msa0289850:CDS |
AACTTTGTAGATAGAACCCA+TGG | 0.589394 | 2_3:+36258222 | None:intergenic |
ACCATAGTTGGAACGATAGT+CGG | 0.596621 | 2_3:+36258381 | None:intergenic |
GCTATAGTCATAAATGGCAT+CGG | 0.596967 | 2_3:-36259738 | Msa0289850:CDS |
CGAACCACATCTCGGTGTGA+GGG | 0.597328 | 2_3:-36258511 | Msa0289850:CDS |
ACGCCTACTTCCACCAGGCG+TGG | 0.597902 | 2_3:+36257715 | None:intergenic |
GTAAAACTAGATTCTTGGGA+AGG | 0.598080 | 2_3:+36258053 | None:intergenic |
GAGGGTTTATCAAGATGTAG+AGG | 0.601064 | 2_3:-36257906 | Msa0289850:CDS |
GGGAATTATTCAGTTGTCGA+AGG | 0.603195 | 2_3:-36257939 | Msa0289850:CDS |
TGGGCGACTGCTCATATCAA+AGG | 0.603639 | 2_3:-36258553 | Msa0289850:CDS |
GAAATTCAAGAGATGTCCAT+GGG | 0.603913 | 2_3:-36258238 | Msa0289850:CDS |
ACGAACCACATCTCGGTGTG+AGG | 0.609021 | 2_3:-36258512 | Msa0289850:CDS |
ATGCATGTTGGGTGATATGG+AGG | 0.613251 | 2_3:-36258671 | Msa0289850:CDS |
TCGGAAGACCCAAGTTCTGA+GGG | 0.617413 | 2_3:-36259592 | Msa0289850:CDS |
ACAGCAATAATATGATCGCA+AGG | 0.619104 | 2_3:+36258100 | None:intergenic |
CAAACGGTCCCTCAGAACTT+GGG | 0.622569 | 2_3:+36259584 | None:intergenic |
ATATCTTAAAAGATGCATGT+TGG | 0.624704 | 2_3:-36258683 | Msa0289850:CDS |
CAGGTATACGAACCACATCT+CGG | 0.625104 | 2_3:-36258519 | Msa0289850:CDS |
GCAATGGCTAATTCATCAGG+TGG | 0.625760 | 2_3:-36259249 | Msa0289850:CDS |
TACTGGACCCTACTTGTGTG+AGG | 0.626363 | 2_3:-36257766 | Msa0289850:CDS |
TTTCTACTCATGGTATGCAA+GGG | 0.627306 | 2_3:-36259631 | Msa0289850:CDS |
ATGGACGAAGCTTCAGACGA+AGG | 0.631163 | 2_3:-36259843 | Msa0289850:CDS |
TAAACCCTCACACCGAGATG+TGG | 0.631791 | 2_3:+36258507 | None:intergenic |
CCTTTATCCGTAATAACTGA+CGG | 0.633304 | 2_3:-36258823 | Msa0289850:CDS |
AGGTTTAGTTACGAGAGAGA+CGG | 0.633832 | 2_3:-36258902 | Msa0289850:CDS |
TACAAAGTTTCAAAGTACTG+TGG | 0.634037 | 2_3:-36258208 | Msa0289850:CDS |
TTGGTTATGATGATTAACAC+CGG | 0.637737 | 2_3:+36258942 | None:intergenic |
ACTGTGGAAATGGAAGTGTC+TGG | 0.638067 | 2_3:-36258192 | Msa0289850:CDS |
TATAGCATTCCCATTAGACT+CGG | 0.641750 | 2_3:+36259755 | None:intergenic |
GAGGGTTTACATAGTCACAT+AGG | 0.642304 | 2_3:-36258493 | Msa0289850:CDS |
GCTTCGAAACAATGTCTATG+TGG | 0.645082 | 2_3:+36259430 | None:intergenic |
AATGGGGCTAATGAGTGTGA+TGG | 0.645283 | 2_3:-36259804 | Msa0289850:CDS |
CCCAGAAATGATACCAGGTG+TGG | 0.648094 | 2_3:-36259474 | Msa0289850:CDS |
TGTGTGAGGACTAAAGGGTG+TGG | 0.651598 | 2_3:-36257752 | Msa0289850:CDS |
TGTCGAAGGATGTGGCTGAG+AGG | 0.652941 | 2_3:-36257925 | Msa0289850:CDS |
TGAGGACGCCTACTTCCACC+AGG | 0.673688 | 2_3:+36257710 | None:intergenic |
ATAACCAATCAGGAAGACAA+AGG | 0.684750 | 2_3:-36259191 | Msa0289850:CDS |
ACAGGGGATTGACCTTGGAG+AGG | 0.687350 | 2_3:-36259509 | Msa0289850:CDS |
AGATAATATGGATGACAATG+GGG | 0.688595 | 2_3:-36259820 | Msa0289850:CDS |
CCTCAATCATGTAGTCAGTG+TGG | 0.690892 | 2_3:-36257692 | Msa0289850:CDS |
GCAAACCATCCAACAACTCG+TGG | 0.699078 | 2_3:+36259373 | None:intergenic |
CACTAAGAAAATCTACAATG+CGG | 0.712293 | 2_3:+36257876 | None:intergenic |
AGCATCGAACCAGTTTACAA+GGG | 0.716912 | 2_3:-36258317 | Msa0289850:CDS |
TAATGACAATATTAACATCG+AGG | 0.732342 | 2_3:-36259868 | Msa0289850:CDS |
TGGTATTGATGCTAGCACTG+GGG | 0.762460 | 2_3:-36257816 | Msa0289850:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTGAAAAGTATAAGAATGT+TGG | - | chr2_3:36258171-36258190 | Msa0289850:CDS | 20.0% |
!!! | CGTATGAATTATGAAATTTT+TGG | - | chr2_3:36258438-36258457 | Msa0289850:CDS | 20.0% |
!!! | TTTTGGAAATATACTCTTTA+TGG | + | chr2_3:36258691-36258710 | None:intergenic | 20.0% |
!!! | TTTAAGATATGACATGAAAT+CGG | + | chr2_3:36258775-36258794 | None:intergenic | 20.0% |
!!! | ATTGAAAAGTATAAGAATGT+TGG | - | chr2_3:36258171-36258190 | Msa0289850:CDS | 20.0% |
!!! | CGTATGAATTATGAAATTTT+TGG | - | chr2_3:36258438-36258457 | Msa0289850:CDS | 20.0% |
!!! | TTTTGGAAATATACTCTTTA+TGG | + | chr2_3:36258691-36258710 | None:intergenic | 20.0% |
!!! | TTTAAGATATGACATGAAAT+CGG | + | chr2_3:36258775-36258794 | None:intergenic | 20.0% |
! | TAATGACAATATTAACATCG+AGG | - | chr2_3:36257600-36257619 | Msa0289850:CDS | 25.0% |
! | TTGCATATAATTTCTACTCA+TGG | - | chr2_3:36257827-36257846 | Msa0289850:CDS | 25.0% |
!! | AAATTAGTTTCATCTGACTT+TGG | - | chr2_3:36258300-36258319 | Msa0289850:CDS | 25.0% |
! | TATGTGCAACATACATTAAA+GGG | + | chr2_3:36258365-36258384 | None:intergenic | 25.0% |
!!! | TGAAATTTTTGGTGATGTAT+TGG | - | chr2_3:36258449-36258468 | Msa0289850:CDS | 25.0% |
! | ATATCTTAAAAGATGCATGT+TGG | - | chr2_3:36258785-36258804 | Msa0289850:CDS | 25.0% |
! | TATCTTAAAAGATGCATGTT+GGG | - | chr2_3:36258786-36258805 | Msa0289850:CDS | 25.0% |
! | TGAATAAGTTTGAAGAACTA+TGG | - | chr2_3:36258820-36258839 | Msa0289850:CDS | 25.0% |
! | GAATAAGTTTGAAGAACTAT+GGG | - | chr2_3:36258821-36258840 | Msa0289850:CDS | 25.0% |
! | GAAGAAATGGTTGAAAAATT+TGG | - | chr2_3:36258843-36258862 | Msa0289850:CDS | 25.0% |
! | TGTATGCAAAAAAAAGAATG+TGG | - | chr2_3:36258895-36258914 | Msa0289850:CDS | 25.0% |
! | GTATGCAAAAAAAAGAATGT+GGG | - | chr2_3:36258896-36258915 | Msa0289850:CDS | 25.0% |
!!! | AAGATTTTTTCAGAGCATTA+CGG | + | chr2_3:36259193-36259212 | None:intergenic | 25.0% |
! | ATTAATGAAGATGATGAAGA+AGG | - | chr2_3:36259884-36259903 | Msa0289850:CDS | 25.0% |
! | TAATGACAATATTAACATCG+AGG | - | chr2_3:36257600-36257619 | Msa0289850:CDS | 25.0% |
! | TTGCATATAATTTCTACTCA+TGG | - | chr2_3:36257827-36257846 | Msa0289850:CDS | 25.0% |
!! | AAATTAGTTTCATCTGACTT+TGG | - | chr2_3:36258300-36258319 | Msa0289850:CDS | 25.0% |
! | TATGTGCAACATACATTAAA+GGG | + | chr2_3:36258365-36258384 | None:intergenic | 25.0% |
!!! | TGAAATTTTTGGTGATGTAT+TGG | - | chr2_3:36258449-36258468 | Msa0289850:CDS | 25.0% |
! | ATATCTTAAAAGATGCATGT+TGG | - | chr2_3:36258785-36258804 | Msa0289850:CDS | 25.0% |
! | TATCTTAAAAGATGCATGTT+GGG | - | chr2_3:36258786-36258805 | Msa0289850:CDS | 25.0% |
! | TGAATAAGTTTGAAGAACTA+TGG | - | chr2_3:36258820-36258839 | Msa0289850:CDS | 25.0% |
! | GAATAAGTTTGAAGAACTAT+GGG | - | chr2_3:36258821-36258840 | Msa0289850:CDS | 25.0% |
! | GAAGAAATGGTTGAAAAATT+TGG | - | chr2_3:36258843-36258862 | Msa0289850:CDS | 25.0% |
! | TGTATGCAAAAAAAAGAATG+TGG | - | chr2_3:36258895-36258914 | Msa0289850:CDS | 25.0% |
! | GTATGCAAAAAAAAGAATGT+GGG | - | chr2_3:36258896-36258915 | Msa0289850:CDS | 25.0% |
!!! | AAGATTTTTTCAGAGCATTA+CGG | + | chr2_3:36259193-36259212 | None:intergenic | 25.0% |
! | ATTAATGAAGATGATGAAGA+AGG | - | chr2_3:36259884-36259903 | Msa0289850:CDS | 25.0% |
CAATATTAACATCGAGGAAA+TGG | - | chr2_3:36257606-36257625 | Msa0289850:CDS | 30.0% | |
GAGATAATATGGATGACAAT+GGG | - | chr2_3:36257647-36257666 | Msa0289850:CDS | 30.0% | |
AGATAATATGGATGACAATG+GGG | - | chr2_3:36257648-36257667 | Msa0289850:CDS | 30.0% | |
!! | CATCGGTGATATTTTAAAGA+TGG | - | chr2_3:36257747-36257766 | Msa0289850:CDS | 30.0% |
TTTCTGTAGATGTAGTTGAA+AGG | - | chr2_3:36257782-36257801 | Msa0289850:CDS | 30.0% | |
GTTATGCGCAAATTCAAATA+CGG | + | chr2_3:36258076-36258095 | None:intergenic | 30.0% | |
!! | CAAGTTAGGTTTTGTGAAAA+AGG | - | chr2_3:36258248-36258267 | Msa0289850:CDS | 30.0% |
AAGGATTTGTATAACCAATC+AGG | - | chr2_3:36258267-36258286 | Msa0289850:CDS | 30.0% | |
GTATGTGCAACATACATTAA+AGG | + | chr2_3:36258366-36258385 | None:intergenic | 30.0% | |
ATACTGTAGACAAAGATAAG+AGG | - | chr2_3:36258382-36258401 | Msa0289850:CDS | 30.0% | |
TTTCCTATAAGTTGCATCAA+AGG | + | chr2_3:36258475-36258494 | None:intergenic | 30.0% | |
TTGGTTATGATGATTAACAC+CGG | + | chr2_3:36258529-36258548 | None:intergenic | 30.0% | |
! | CATAATCTATGATGTGCTTT+TGG | + | chr2_3:36258708-36258727 | None:intergenic | 30.0% |
!!! | ATCAAAGGAGAATTTTTTGC+AGG | - | chr2_3:36258930-36258949 | Msa0289850:CDS | 30.0% |
CTCGAAATCGAAAATATGTA+AGG | + | chr2_3:36259058-36259077 | None:intergenic | 30.0% | |
!! | TACAAAGTTTCAAAGTACTG+TGG | - | chr2_3:36259260-36259279 | Msa0289850:CDS | 30.0% |
ATTTCAAATGTTCGTGTCTT+AGG | - | chr2_3:36259327-36259346 | Msa0289850:CDS | 30.0% | |
!!! | TATTGCTGTTTTGATGTATC+TGG | - | chr2_3:36259382-36259401 | Msa0289850:CDS | 30.0% |
CTGTGTAAAACTAGATTCTT+GGG | + | chr2_3:36259422-36259441 | None:intergenic | 30.0% | |
ACACAAATGGTTCACAATAT+TGG | - | chr2_3:36259480-36259499 | Msa0289850:CDS | 30.0% | |
CACAAATGGTTCACAATATT+GGG | - | chr2_3:36259481-36259500 | Msa0289850:CDS | 30.0% | |
CACTAAGAAAATCTACAATG+CGG | + | chr2_3:36259595-36259614 | None:intergenic | 30.0% | |
AATAAACGATCATGTCCTAA+AGG | - | chr2_3:36259812-36259831 | Msa0289850:CDS | 30.0% | |
CAATATTAACATCGAGGAAA+TGG | - | chr2_3:36257606-36257625 | Msa0289850:CDS | 30.0% | |
GAGATAATATGGATGACAAT+GGG | - | chr2_3:36257647-36257666 | Msa0289850:CDS | 30.0% | |
AGATAATATGGATGACAATG+GGG | - | chr2_3:36257648-36257667 | Msa0289850:CDS | 30.0% | |
!! | CATCGGTGATATTTTAAAGA+TGG | - | chr2_3:36257747-36257766 | Msa0289850:CDS | 30.0% |
TTTCTGTAGATGTAGTTGAA+AGG | - | chr2_3:36257782-36257801 | Msa0289850:CDS | 30.0% | |
GTTATGCGCAAATTCAAATA+CGG | + | chr2_3:36258076-36258095 | None:intergenic | 30.0% | |
!! | CAAGTTAGGTTTTGTGAAAA+AGG | - | chr2_3:36258248-36258267 | Msa0289850:CDS | 30.0% |
AAGGATTTGTATAACCAATC+AGG | - | chr2_3:36258267-36258286 | Msa0289850:CDS | 30.0% | |
GTATGTGCAACATACATTAA+AGG | + | chr2_3:36258366-36258385 | None:intergenic | 30.0% | |
ATACTGTAGACAAAGATAAG+AGG | - | chr2_3:36258382-36258401 | Msa0289850:CDS | 30.0% | |
TTTCCTATAAGTTGCATCAA+AGG | + | chr2_3:36258475-36258494 | None:intergenic | 30.0% | |
TTGGTTATGATGATTAACAC+CGG | + | chr2_3:36258529-36258548 | None:intergenic | 30.0% | |
! | CATAATCTATGATGTGCTTT+TGG | + | chr2_3:36258708-36258727 | None:intergenic | 30.0% |
!!! | ATCAAAGGAGAATTTTTTGC+AGG | - | chr2_3:36258930-36258949 | Msa0289850:CDS | 30.0% |
CTCGAAATCGAAAATATGTA+AGG | + | chr2_3:36259058-36259077 | None:intergenic | 30.0% | |
!! | TACAAAGTTTCAAAGTACTG+TGG | - | chr2_3:36259260-36259279 | Msa0289850:CDS | 30.0% |
ATTTCAAATGTTCGTGTCTT+AGG | - | chr2_3:36259327-36259346 | Msa0289850:CDS | 30.0% | |
!!! | TATTGCTGTTTTGATGTATC+TGG | - | chr2_3:36259382-36259401 | Msa0289850:CDS | 30.0% |
CTGTGTAAAACTAGATTCTT+GGG | + | chr2_3:36259422-36259441 | None:intergenic | 30.0% | |
ACACAAATGGTTCACAATAT+TGG | - | chr2_3:36259480-36259499 | Msa0289850:CDS | 30.0% | |
CACAAATGGTTCACAATATT+GGG | - | chr2_3:36259481-36259500 | Msa0289850:CDS | 30.0% | |
CACTAAGAAAATCTACAATG+CGG | + | chr2_3:36259595-36259614 | None:intergenic | 30.0% | |
AATAAACGATCATGTCCTAA+AGG | - | chr2_3:36259812-36259831 | Msa0289850:CDS | 30.0% | |
TTCAGACGAAGGAGATAATA+TGG | - | chr2_3:36257636-36257655 | Msa0289850:CDS | 35.0% | |
GGAGATAATATGGATGACAA+TGG | - | chr2_3:36257646-36257665 | Msa0289850:CDS | 35.0% | |
TATAGCATTCCCATTAGACT+CGG | + | chr2_3:36257716-36257735 | None:intergenic | 35.0% | |
GGGAATGCTATAGTCATAAA+TGG | - | chr2_3:36257724-36257743 | Msa0289850:CDS | 35.0% | |
GCTATAGTCATAAATGGCAT+CGG | - | chr2_3:36257730-36257749 | Msa0289850:CDS | 35.0% | |
ATTTCTACTCATGGTATGCA+AGG | - | chr2_3:36257836-36257855 | Msa0289850:CDS | 35.0% | |
TTTCTACTCATGGTATGCAA+GGG | - | chr2_3:36257837-36257856 | Msa0289850:CDS | 35.0% | |
!! | AGCAAACTTTTGTTTGTTCG+CGG | - | chr2_3:36257920-36257939 | Msa0289850:CDS | 35.0% |
!! | TTTGCTATGTGGTCTTTTAC+CGG | - | chr2_3:36258113-36258132 | Msa0289850:CDS | 35.0% |
GTAAGACCATATCAAACGTA+TGG | - | chr2_3:36258195-36258214 | Msa0289850:CDS | 35.0% | |
ATTGCACCATACGTTTGATA+TGG | + | chr2_3:36258204-36258223 | None:intergenic | 35.0% | |
ATATCAAACGTATGGTGCAA+TGG | - | chr2_3:36258203-36258222 | Msa0289850:CDS | 35.0% | |
ATAACCAATCAGGAAGACAA+AGG | - | chr2_3:36258277-36258296 | Msa0289850:CDS | 35.0% | |
ATTTCCTTTGTCTTCCTGAT+TGG | + | chr2_3:36258284-36258303 | None:intergenic | 35.0% | |
TTAGTTTCATCTGACTTTGG+CGG | - | chr2_3:36258303-36258322 | Msa0289850:CDS | 35.0% | |
ACACCGGAGAAAATAACAAA+CGG | + | chr2_3:36258513-36258532 | None:intergenic | 35.0% | |
AGAGACATATGTTTGGTTGT+TGG | - | chr2_3:36258590-36258609 | Msa0289850:CDS | 35.0% | |
CCTTTATCCGTAATAACTGA+CGG | - | chr2_3:36258645-36258664 | Msa0289850:CDS | 35.0% | |
AACATCACCGTCAGTTATTA+CGG | + | chr2_3:36258655-36258674 | None:intergenic | 35.0% | |
CACATCATAGATTATGTGCT+TGG | - | chr2_3:36258712-36258731 | Msa0289850:CDS | 35.0% | |
TGAAGAACTATGGGAAGAAA+TGG | - | chr2_3:36258830-36258849 | Msa0289850:CDS | 35.0% | |
! | TAAGGCATCTATGAAATTGC+TGG | + | chr2_3:36259040-36259059 | None:intergenic | 35.0% |
! | TCGCAAACTAGTTTGCAATA+CGG | + | chr2_3:36259117-36259136 | None:intergenic | 35.0% |
AGAAAATCTCCCTTGTAAAC+TGG | + | chr2_3:36259163-36259182 | None:intergenic | 35.0% | |
!! | TTTTCAGAGCATTACGGAAA+AGG | + | chr2_3:36259187-36259206 | None:intergenic | 35.0% |
TGAAATTCAAGAGATGTCCA+TGG | - | chr2_3:36259229-36259248 | Msa0289850:CDS | 35.0% | |
GAAATTCAAGAGATGTCCAT+GGG | - | chr2_3:36259230-36259249 | Msa0289850:CDS | 35.0% | |
AACTTTGTAGATAGAACCCA+TGG | + | chr2_3:36259249-36259268 | None:intergenic | 35.0% | |
!! | GTTTCAAAGTACTGTGGAAA+TGG | - | chr2_3:36259266-36259285 | Msa0289850:CDS | 35.0% |
! | CACGAACATTTGAAATCTAC+AGG | + | chr2_3:36259323-36259342 | None:intergenic | 35.0% |
ACAGCAATAATATGATCGCA+AGG | + | chr2_3:36259371-36259390 | None:intergenic | 35.0% | |
GTAAAACTAGATTCTTGGGA+AGG | + | chr2_3:36259418-36259437 | None:intergenic | 35.0% | |
CCTGTGTAAAACTAGATTCT+TGG | + | chr2_3:36259423-36259442 | None:intergenic | 35.0% | |
!!! | CCAAGAATCTAGTTTTACAC+AGG | - | chr2_3:36259420-36259439 | Msa0289850:CDS | 35.0% |
!!! | AGAATCTAGTTTTACACAGG+TGG | - | chr2_3:36259423-36259442 | Msa0289850:CDS | 35.0% |
TCAAATTGCTTCAAGGTATG+CGG | - | chr2_3:36259508-36259527 | Msa0289850:CDS | 35.0% | |
!! | TTCTTAGTGCTGAACTTTTG+AGG | - | chr2_3:36259606-36259625 | Msa0289850:CDS | 35.0% |
AAGAATAAACCAACAGCTGT+TGG | - | chr2_3:36259632-36259651 | Msa0289850:CDS | 35.0% | |
!! | TCAAAGTTGTTGACTCCTTT+AGG | + | chr2_3:36259830-36259849 | None:intergenic | 35.0% |
TTCAGACGAAGGAGATAATA+TGG | - | chr2_3:36257636-36257655 | Msa0289850:CDS | 35.0% | |
GGAGATAATATGGATGACAA+TGG | - | chr2_3:36257646-36257665 | Msa0289850:CDS | 35.0% | |
TATAGCATTCCCATTAGACT+CGG | + | chr2_3:36257716-36257735 | None:intergenic | 35.0% | |
GGGAATGCTATAGTCATAAA+TGG | - | chr2_3:36257724-36257743 | Msa0289850:CDS | 35.0% | |
GCTATAGTCATAAATGGCAT+CGG | - | chr2_3:36257730-36257749 | Msa0289850:CDS | 35.0% | |
ATTTCTACTCATGGTATGCA+AGG | - | chr2_3:36257836-36257855 | Msa0289850:CDS | 35.0% | |
TTTCTACTCATGGTATGCAA+GGG | - | chr2_3:36257837-36257856 | Msa0289850:CDS | 35.0% | |
!! | AGCAAACTTTTGTTTGTTCG+CGG | - | chr2_3:36257920-36257939 | Msa0289850:CDS | 35.0% |
!! | TTTGCTATGTGGTCTTTTAC+CGG | - | chr2_3:36258113-36258132 | Msa0289850:CDS | 35.0% |
GTAAGACCATATCAAACGTA+TGG | - | chr2_3:36258195-36258214 | Msa0289850:CDS | 35.0% | |
ATTGCACCATACGTTTGATA+TGG | + | chr2_3:36258204-36258223 | None:intergenic | 35.0% | |
ATATCAAACGTATGGTGCAA+TGG | - | chr2_3:36258203-36258222 | Msa0289850:CDS | 35.0% | |
ATAACCAATCAGGAAGACAA+AGG | - | chr2_3:36258277-36258296 | Msa0289850:CDS | 35.0% | |
ATTTCCTTTGTCTTCCTGAT+TGG | + | chr2_3:36258284-36258303 | None:intergenic | 35.0% | |
TTAGTTTCATCTGACTTTGG+CGG | - | chr2_3:36258303-36258322 | Msa0289850:CDS | 35.0% | |
ACACCGGAGAAAATAACAAA+CGG | + | chr2_3:36258513-36258532 | None:intergenic | 35.0% | |
AGAGACATATGTTTGGTTGT+TGG | - | chr2_3:36258590-36258609 | Msa0289850:CDS | 35.0% | |
CCTTTATCCGTAATAACTGA+CGG | - | chr2_3:36258645-36258664 | Msa0289850:CDS | 35.0% | |
AACATCACCGTCAGTTATTA+CGG | + | chr2_3:36258655-36258674 | None:intergenic | 35.0% | |
CACATCATAGATTATGTGCT+TGG | - | chr2_3:36258712-36258731 | Msa0289850:CDS | 35.0% | |
TGAAGAACTATGGGAAGAAA+TGG | - | chr2_3:36258830-36258849 | Msa0289850:CDS | 35.0% | |
! | TAAGGCATCTATGAAATTGC+TGG | + | chr2_3:36259040-36259059 | None:intergenic | 35.0% |
! | TCGCAAACTAGTTTGCAATA+CGG | + | chr2_3:36259117-36259136 | None:intergenic | 35.0% |
AGAAAATCTCCCTTGTAAAC+TGG | + | chr2_3:36259163-36259182 | None:intergenic | 35.0% | |
!! | TTTTCAGAGCATTACGGAAA+AGG | + | chr2_3:36259187-36259206 | None:intergenic | 35.0% |
TGAAATTCAAGAGATGTCCA+TGG | - | chr2_3:36259229-36259248 | Msa0289850:CDS | 35.0% | |
GAAATTCAAGAGATGTCCAT+GGG | - | chr2_3:36259230-36259249 | Msa0289850:CDS | 35.0% | |
AACTTTGTAGATAGAACCCA+TGG | + | chr2_3:36259249-36259268 | None:intergenic | 35.0% | |
!! | GTTTCAAAGTACTGTGGAAA+TGG | - | chr2_3:36259266-36259285 | Msa0289850:CDS | 35.0% |
! | CACGAACATTTGAAATCTAC+AGG | + | chr2_3:36259323-36259342 | None:intergenic | 35.0% |
ACAGCAATAATATGATCGCA+AGG | + | chr2_3:36259371-36259390 | None:intergenic | 35.0% | |
GTAAAACTAGATTCTTGGGA+AGG | + | chr2_3:36259418-36259437 | None:intergenic | 35.0% | |
CCTGTGTAAAACTAGATTCT+TGG | + | chr2_3:36259423-36259442 | None:intergenic | 35.0% | |
!!! | CCAAGAATCTAGTTTTACAC+AGG | - | chr2_3:36259420-36259439 | Msa0289850:CDS | 35.0% |
!!! | AGAATCTAGTTTTACACAGG+TGG | - | chr2_3:36259423-36259442 | Msa0289850:CDS | 35.0% |
TCAAATTGCTTCAAGGTATG+CGG | - | chr2_3:36259508-36259527 | Msa0289850:CDS | 35.0% | |
!! | TTCTTAGTGCTGAACTTTTG+AGG | - | chr2_3:36259606-36259625 | Msa0289850:CDS | 35.0% |
AAGAATAAACCAACAGCTGT+TGG | - | chr2_3:36259632-36259651 | Msa0289850:CDS | 35.0% | |
!! | TCAAAGTTGTTGACTCCTTT+AGG | + | chr2_3:36259830-36259849 | None:intergenic | 35.0% |
TCATGGTATGCAAGGGTAAA+CGG | - | chr2_3:36257844-36257863 | Msa0289850:CDS | 40.0% | |
!! | GGGTAAACGGATTTTCTGTT+CGG | - | chr2_3:36257857-36257876 | Msa0289850:CDS | 40.0% |
!! | GCAAACTTTTGTTTGTTCGC+GGG | - | chr2_3:36257921-36257940 | Msa0289850:CDS | 40.0% |
GCTTCGAAACAATGTCTATG+TGG | + | chr2_3:36258041-36258060 | None:intergenic | 40.0% | |
TAGACATTGTTTCGAAGCGT+TGG | - | chr2_3:36258043-36258062 | Msa0289850:CDS | 40.0% | |
!! | TTGTTGGATGGTTTGCTATG+TGG | - | chr2_3:36258102-36258121 | Msa0289850:CDS | 40.0% |
! | TCAGGTGGTTTTCACAAGTT+AGG | - | chr2_3:36258234-36258253 | Msa0289850:CDS | 40.0% |
!!! | AGAGGCTTGAACGTCTTTTT+TGG | - | chr2_3:36258400-36258419 | Msa0289850:CDS | 40.0% |
!!! | GAACGTCTTTTTTGGTGTGA+TGG | - | chr2_3:36258408-36258427 | Msa0289850:CDS | 40.0% |
TGGCCTTTGATGCAACTTAT+AGG | - | chr2_3:36258469-36258488 | Msa0289850:CDS | 40.0% | |
!!! | TGCCCGTTTGTTATTTTCTC+CGG | - | chr2_3:36258507-36258526 | Msa0289850:CDS | 40.0% |
CACCGGAGAAAATAACAAAC+GGG | + | chr2_3:36258512-36258531 | None:intergenic | 40.0% | |
AGGTTTAGTTACGAGAGAGA+CGG | - | chr2_3:36258566-36258585 | Msa0289850:CDS | 40.0% | |
AGACGGAAGAGACATATGTT+TGG | - | chr2_3:36258583-36258602 | Msa0289850:CDS | 40.0% | |
CATTCATAGCAGTCGCAAAT+TGG | + | chr2_3:36258617-36258636 | None:intergenic | 40.0% | |
CAATTTGCGACTGCTATGAA+TGG | - | chr2_3:36258615-36258634 | Msa0289850:CDS | 40.0% | |
CCGTCAGTTATTACGGATAA+AGG | + | chr2_3:36258648-36258667 | None:intergenic | 40.0% | |
TATGTGCTTGGCATCTTCTA+CGG | - | chr2_3:36258724-36258743 | Msa0289850:CDS | 40.0% | |
GGAATGCATCATCGAATGTT+GGG | - | chr2_3:36258745-36258764 | Msa0289850:CDS | 40.0% | |
AAGATGCATGTTGGGTGATA+TGG | - | chr2_3:36258794-36258813 | Msa0289850:CDS | 40.0% | |
TGATCCAATTGTTGTCTTGC+AGG | + | chr2_3:36258869-36258888 | None:intergenic | 40.0% | |
GAGGGTTTACATAGTCACAT+AGG | - | chr2_3:36258975-36258994 | Msa0289850:CDS | 40.0% | |
ACCATAGTTGGAACGATAGT+CGG | + | chr2_3:36259090-36259109 | None:intergenic | 40.0% | |
! | CGCAAACTAGTTTGCAATAC+GGG | + | chr2_3:36259116-36259135 | None:intergenic | 40.0% |
! | AGCATCGAACCAGTTTACAA+GGG | - | chr2_3:36259151-36259170 | Msa0289850:CDS | 40.0% |
CAAATGTTCGTGTCTTAGGA+TGG | - | chr2_3:36259331-36259350 | Msa0289850:CDS | 40.0% | |
GTTCGAGCAAGATACACAAA+TGG | - | chr2_3:36259467-36259486 | Msa0289850:CDS | 40.0% | |
GGGATTCTCAAATTGCTTCA+AGG | - | chr2_3:36259501-36259520 | Msa0289850:CDS | 40.0% | |
CAAATTGCTTCAAGGTATGC+GGG | - | chr2_3:36259509-36259528 | Msa0289850:CDS | 40.0% | |
GGGAATTATTCAGTTGTCGA+AGG | - | chr2_3:36259529-36259548 | Msa0289850:CDS | 40.0% | |
TATTCAGTTGTCGAAGGATG+TGG | - | chr2_3:36259535-36259554 | Msa0289850:CDS | 40.0% | |
GAGGGTTTATCAAGATGTAG+AGG | - | chr2_3:36259562-36259581 | Msa0289850:CDS | 40.0% | |
!! | TTGGTATTGATGCTAGCACT+GGG | - | chr2_3:36259651-36259670 | Msa0289850:CDS | 40.0% |
CTTTAGTCCTCACACAAGTA+GGG | + | chr2_3:36259712-36259731 | None:intergenic | 40.0% | |
CTACTTGTGTGAGGACTAAA+GGG | - | chr2_3:36259711-36259730 | Msa0289850:CDS | 40.0% | |
TCATGGTATGCAAGGGTAAA+CGG | - | chr2_3:36257844-36257863 | Msa0289850:CDS | 40.0% | |
!! | GGGTAAACGGATTTTCTGTT+CGG | - | chr2_3:36257857-36257876 | Msa0289850:CDS | 40.0% |
!! | GCAAACTTTTGTTTGTTCGC+GGG | - | chr2_3:36257921-36257940 | Msa0289850:CDS | 40.0% |
GCTTCGAAACAATGTCTATG+TGG | + | chr2_3:36258041-36258060 | None:intergenic | 40.0% | |
TAGACATTGTTTCGAAGCGT+TGG | - | chr2_3:36258043-36258062 | Msa0289850:CDS | 40.0% | |
!! | TTGTTGGATGGTTTGCTATG+TGG | - | chr2_3:36258102-36258121 | Msa0289850:CDS | 40.0% |
! | TCAGGTGGTTTTCACAAGTT+AGG | - | chr2_3:36258234-36258253 | Msa0289850:CDS | 40.0% |
!!! | AGAGGCTTGAACGTCTTTTT+TGG | - | chr2_3:36258400-36258419 | Msa0289850:CDS | 40.0% |
!!! | GAACGTCTTTTTTGGTGTGA+TGG | - | chr2_3:36258408-36258427 | Msa0289850:CDS | 40.0% |
TGGCCTTTGATGCAACTTAT+AGG | - | chr2_3:36258469-36258488 | Msa0289850:CDS | 40.0% | |
!!! | TGCCCGTTTGTTATTTTCTC+CGG | - | chr2_3:36258507-36258526 | Msa0289850:CDS | 40.0% |
CACCGGAGAAAATAACAAAC+GGG | + | chr2_3:36258512-36258531 | None:intergenic | 40.0% | |
AGGTTTAGTTACGAGAGAGA+CGG | - | chr2_3:36258566-36258585 | Msa0289850:CDS | 40.0% | |
AGACGGAAGAGACATATGTT+TGG | - | chr2_3:36258583-36258602 | Msa0289850:CDS | 40.0% | |
CATTCATAGCAGTCGCAAAT+TGG | + | chr2_3:36258617-36258636 | None:intergenic | 40.0% | |
CAATTTGCGACTGCTATGAA+TGG | - | chr2_3:36258615-36258634 | Msa0289850:CDS | 40.0% | |
CCGTCAGTTATTACGGATAA+AGG | + | chr2_3:36258648-36258667 | None:intergenic | 40.0% | |
TATGTGCTTGGCATCTTCTA+CGG | - | chr2_3:36258724-36258743 | Msa0289850:CDS | 40.0% | |
GGAATGCATCATCGAATGTT+GGG | - | chr2_3:36258745-36258764 | Msa0289850:CDS | 40.0% | |
AAGATGCATGTTGGGTGATA+TGG | - | chr2_3:36258794-36258813 | Msa0289850:CDS | 40.0% | |
TGATCCAATTGTTGTCTTGC+AGG | + | chr2_3:36258869-36258888 | None:intergenic | 40.0% | |
GAGGGTTTACATAGTCACAT+AGG | - | chr2_3:36258975-36258994 | Msa0289850:CDS | 40.0% | |
ACCATAGTTGGAACGATAGT+CGG | + | chr2_3:36259090-36259109 | None:intergenic | 40.0% | |
! | CGCAAACTAGTTTGCAATAC+GGG | + | chr2_3:36259116-36259135 | None:intergenic | 40.0% |
! | AGCATCGAACCAGTTTACAA+GGG | - | chr2_3:36259151-36259170 | Msa0289850:CDS | 40.0% |
CAAATGTTCGTGTCTTAGGA+TGG | - | chr2_3:36259331-36259350 | Msa0289850:CDS | 40.0% | |
GTTCGAGCAAGATACACAAA+TGG | - | chr2_3:36259467-36259486 | Msa0289850:CDS | 40.0% | |
GGGATTCTCAAATTGCTTCA+AGG | - | chr2_3:36259501-36259520 | Msa0289850:CDS | 40.0% | |
CAAATTGCTTCAAGGTATGC+GGG | - | chr2_3:36259509-36259528 | Msa0289850:CDS | 40.0% | |
GGGAATTATTCAGTTGTCGA+AGG | - | chr2_3:36259529-36259548 | Msa0289850:CDS | 40.0% | |
TATTCAGTTGTCGAAGGATG+TGG | - | chr2_3:36259535-36259554 | Msa0289850:CDS | 40.0% | |
GAGGGTTTATCAAGATGTAG+AGG | - | chr2_3:36259562-36259581 | Msa0289850:CDS | 40.0% | |
!! | TTGGTATTGATGCTAGCACT+GGG | - | chr2_3:36259651-36259670 | Msa0289850:CDS | 40.0% |
CTTTAGTCCTCACACAAGTA+GGG | + | chr2_3:36259712-36259731 | None:intergenic | 40.0% | |
CTACTTGTGTGAGGACTAAA+GGG | - | chr2_3:36259711-36259730 | Msa0289850:CDS | 40.0% | |
AATGGGGCTAATGAGTGTGA+TGG | - | chr2_3:36257664-36257683 | Msa0289850:CDS | 45.0% | |
AGCGATTCATCCGAGTCTAA+TGG | - | chr2_3:36257703-36257722 | Msa0289850:CDS | 45.0% | |
GCGATTCATCCGAGTCTAAT+GGG | - | chr2_3:36257704-36257723 | Msa0289850:CDS | 45.0% | |
GCTGCAGAACATTACCCAAA+CGG | + | chr2_3:36257903-36257922 | None:intergenic | 45.0% | |
!! | ACTTTTGTTTGTTCGCGGGA+AGG | - | chr2_3:36257925-36257944 | Msa0289850:CDS | 45.0% |
!!! | GGAAGGTTTTAGAGAGGACA+GGG | - | chr2_3:36257942-36257961 | Msa0289850:CDS | 45.0% |
!!! | GAAGGTTTTAGAGAGGACAG+GGG | - | chr2_3:36257943-36257962 | Msa0289850:CDS | 45.0% |
GAGAACCCAGAAATGATACC+AGG | - | chr2_3:36257989-36258008 | Msa0289850:CDS | 45.0% | |
CCACACCTGGTATCATTTCT+GGG | + | chr2_3:36257997-36258016 | None:intergenic | 45.0% | |
TCCACACCTGGTATCATTTC+TGG | + | chr2_3:36257998-36258017 | None:intergenic | 45.0% | |
! | TTTTGCAGAACATCCACACC+TGG | + | chr2_3:36258010-36258029 | None:intergenic | 45.0% |
CATAACCACGAGTTGTTGGA+TGG | - | chr2_3:36258090-36258109 | Msa0289850:CDS | 45.0% | |
!! | GCTGTTAGCTTTCTATGTGC+CGG | + | chr2_3:36258135-36258154 | None:intergenic | 45.0% |
GGTGCAATGGCTAATTCATC+AGG | - | chr2_3:36258216-36258235 | Msa0289850:CDS | 45.0% | |
GCAATGGCTAATTCATCAGG+TGG | - | chr2_3:36258219-36258238 | Msa0289850:CDS | 45.0% | |
CTGTCGCAAAGACAACAGTT+TGG | + | chr2_3:36258548-36258567 | None:intergenic | 45.0% | |
CAAACTGTTGTCTTTGCGAC+AGG | - | chr2_3:36258546-36258565 | Msa0289850:CDS | 45.0% | |
TGCGACTGCTATGAATGGTA+AGG | - | chr2_3:36258620-36258639 | Msa0289850:CDS | 45.0% | |
CGGAATGCATCATCGAATGT+TGG | - | chr2_3:36258744-36258763 | Msa0289850:CDS | 45.0% | |
ATGCATGTTGGGTGATATGG+AGG | - | chr2_3:36258797-36258816 | Msa0289850:CDS | 45.0% | |
TTGGCCTGCAAGACAACAAT+TGG | - | chr2_3:36258862-36258881 | Msa0289850:CDS | 45.0% | |
CAGGTATACGAACCACATCT+CGG | - | chr2_3:36258949-36258968 | Msa0289850:CDS | 45.0% | |
TCCGACTATCGTTCCAACTA+TGG | - | chr2_3:36259086-36259105 | Msa0289850:CDS | 45.0% | |
! | CAATACGGGTTGACCATAGT+TGG | + | chr2_3:36259102-36259121 | None:intergenic | 45.0% |
! | CAGCATCGAACCAGTTTACA+AGG | - | chr2_3:36259150-36259169 | Msa0289850:CDS | 45.0% |
!! | ACTGTGGAAATGGAAGTGTC+TGG | - | chr2_3:36259276-36259295 | Msa0289850:CDS | 45.0% |
TGTCTTAGGATGGAGTCGTT+TGG | - | chr2_3:36259341-36259360 | Msa0289850:CDS | 45.0% | |
GCATCAATACCAACAGCTGT+TGG | + | chr2_3:36259644-36259663 | None:intergenic | 45.0% | |
!! | GTTGGTATTGATGCTAGCAC+TGG | - | chr2_3:36259650-36259669 | Msa0289850:CDS | 45.0% |
!! | TGGTATTGATGCTAGCACTG+GGG | - | chr2_3:36259652-36259671 | Msa0289850:CDS | 45.0% |
AGTCGTCGACGAAAGTTTAC+TGG | - | chr2_3:36259685-36259704 | Msa0289850:CDS | 45.0% | |
CCTTTAGTCCTCACACAAGT+AGG | + | chr2_3:36259713-36259732 | None:intergenic | 45.0% | |
CCTACTTGTGTGAGGACTAA+AGG | - | chr2_3:36259710-36259729 | Msa0289850:CDS | 45.0% | |
! | CCACACTGACTACATGATTG+AGG | + | chr2_3:36259779-36259798 | None:intergenic | 45.0% |
CCTCAATCATGTAGTCAGTG+TGG | - | chr2_3:36259776-36259795 | Msa0289850:CDS | 45.0% | |
TGTAGTCAGTGTGGTGTGAT+AGG | - | chr2_3:36259785-36259804 | Msa0289850:CDS | 45.0% | |
AATGGGGCTAATGAGTGTGA+TGG | - | chr2_3:36257664-36257683 | Msa0289850:CDS | 45.0% | |
AGCGATTCATCCGAGTCTAA+TGG | - | chr2_3:36257703-36257722 | Msa0289850:CDS | 45.0% | |
GCGATTCATCCGAGTCTAAT+GGG | - | chr2_3:36257704-36257723 | Msa0289850:CDS | 45.0% | |
GCTGCAGAACATTACCCAAA+CGG | + | chr2_3:36257903-36257922 | None:intergenic | 45.0% | |
!! | ACTTTTGTTTGTTCGCGGGA+AGG | - | chr2_3:36257925-36257944 | Msa0289850:CDS | 45.0% |
!!! | GGAAGGTTTTAGAGAGGACA+GGG | - | chr2_3:36257942-36257961 | Msa0289850:CDS | 45.0% |
!!! | GAAGGTTTTAGAGAGGACAG+GGG | - | chr2_3:36257943-36257962 | Msa0289850:CDS | 45.0% |
GAGAACCCAGAAATGATACC+AGG | - | chr2_3:36257989-36258008 | Msa0289850:CDS | 45.0% | |
CCACACCTGGTATCATTTCT+GGG | + | chr2_3:36257997-36258016 | None:intergenic | 45.0% | |
TCCACACCTGGTATCATTTC+TGG | + | chr2_3:36257998-36258017 | None:intergenic | 45.0% | |
! | TTTTGCAGAACATCCACACC+TGG | + | chr2_3:36258010-36258029 | None:intergenic | 45.0% |
CATAACCACGAGTTGTTGGA+TGG | - | chr2_3:36258090-36258109 | Msa0289850:CDS | 45.0% | |
!! | GCTGTTAGCTTTCTATGTGC+CGG | + | chr2_3:36258135-36258154 | None:intergenic | 45.0% |
GGTGCAATGGCTAATTCATC+AGG | - | chr2_3:36258216-36258235 | Msa0289850:CDS | 45.0% | |
GCAATGGCTAATTCATCAGG+TGG | - | chr2_3:36258219-36258238 | Msa0289850:CDS | 45.0% | |
CTGTCGCAAAGACAACAGTT+TGG | + | chr2_3:36258548-36258567 | None:intergenic | 45.0% | |
CAAACTGTTGTCTTTGCGAC+AGG | - | chr2_3:36258546-36258565 | Msa0289850:CDS | 45.0% | |
TGCGACTGCTATGAATGGTA+AGG | - | chr2_3:36258620-36258639 | Msa0289850:CDS | 45.0% | |
CGGAATGCATCATCGAATGT+TGG | - | chr2_3:36258744-36258763 | Msa0289850:CDS | 45.0% | |
ATGCATGTTGGGTGATATGG+AGG | - | chr2_3:36258797-36258816 | Msa0289850:CDS | 45.0% | |
TTGGCCTGCAAGACAACAAT+TGG | - | chr2_3:36258862-36258881 | Msa0289850:CDS | 45.0% | |
CAGGTATACGAACCACATCT+CGG | - | chr2_3:36258949-36258968 | Msa0289850:CDS | 45.0% | |
TCCGACTATCGTTCCAACTA+TGG | - | chr2_3:36259086-36259105 | Msa0289850:CDS | 45.0% | |
! | CAATACGGGTTGACCATAGT+TGG | + | chr2_3:36259102-36259121 | None:intergenic | 45.0% |
! | CAGCATCGAACCAGTTTACA+AGG | - | chr2_3:36259150-36259169 | Msa0289850:CDS | 45.0% |
!! | ACTGTGGAAATGGAAGTGTC+TGG | - | chr2_3:36259276-36259295 | Msa0289850:CDS | 45.0% |
TGTCTTAGGATGGAGTCGTT+TGG | - | chr2_3:36259341-36259360 | Msa0289850:CDS | 45.0% | |
GCATCAATACCAACAGCTGT+TGG | + | chr2_3:36259644-36259663 | None:intergenic | 45.0% | |
!! | GTTGGTATTGATGCTAGCAC+TGG | - | chr2_3:36259650-36259669 | Msa0289850:CDS | 45.0% |
!! | TGGTATTGATGCTAGCACTG+GGG | - | chr2_3:36259652-36259671 | Msa0289850:CDS | 45.0% |
AGTCGTCGACGAAAGTTTAC+TGG | - | chr2_3:36259685-36259704 | Msa0289850:CDS | 45.0% | |
CCTTTAGTCCTCACACAAGT+AGG | + | chr2_3:36259713-36259732 | None:intergenic | 45.0% | |
CCTACTTGTGTGAGGACTAA+AGG | - | chr2_3:36259710-36259729 | Msa0289850:CDS | 45.0% | |
! | CCACACTGACTACATGATTG+AGG | + | chr2_3:36259779-36259798 | None:intergenic | 45.0% |
CCTCAATCATGTAGTCAGTG+TGG | - | chr2_3:36259776-36259795 | Msa0289850:CDS | 45.0% | |
TGTAGTCAGTGTGGTGTGAT+AGG | - | chr2_3:36259785-36259804 | Msa0289850:CDS | 45.0% | |
ATGGACGAAGCTTCAGACGA+AGG | - | chr2_3:36257625-36257644 | Msa0289850:CDS | 50.0% | |
TTCGGAAGACCCAAGTTCTG+AGG | - | chr2_3:36257875-36257894 | Msa0289850:CDS | 50.0% | |
! | TCGGAAGACCCAAGTTCTGA+GGG | - | chr2_3:36257876-36257895 | Msa0289850:CDS | 50.0% |
CAAACGGTCCCTCAGAACTT+GGG | + | chr2_3:36257887-36257906 | None:intergenic | 50.0% | |
!! | CAAGTTCTGAGGGACCGTTT+GGG | - | chr2_3:36257886-36257905 | Msa0289850:CDS | 50.0% |
!!! | TTCGCGGGAAGGTTTTAGAG+AGG | - | chr2_3:36257936-36257955 | Msa0289850:CDS | 50.0% |
!!! | GGGAAGGTTTTAGAGAGGAC+AGG | - | chr2_3:36257941-36257960 | Msa0289850:CDS | 50.0% |
CCCAGAAATGATACCAGGTG+TGG | - | chr2_3:36257994-36258013 | Msa0289850:CDS | 50.0% | |
TGCGCATAACCACGAGTTGT+TGG | - | chr2_3:36258086-36258105 | Msa0289850:CDS | 50.0% | |
GCAAACCATCCAACAACTCG+TGG | + | chr2_3:36258098-36258117 | None:intergenic | 50.0% | |
TGGGCGACTGCTCATATCAA+AGG | - | chr2_3:36258915-36258934 | Msa0289850:CDS | 50.0% | |
TAAACCCTCACACCGAGATG+TGG | + | chr2_3:36258964-36258983 | None:intergenic | 50.0% | |
TACTGGACCCTACTTGTGTG+AGG | - | chr2_3:36259702-36259721 | Msa0289850:CDS | 50.0% | |
TGTGTGAGGACTAAAGGGTG+TGG | - | chr2_3:36259716-36259735 | Msa0289850:CDS | 50.0% | |
TCTAATCCAATTGCCACGCC+TGG | - | chr2_3:36259740-36259759 | Msa0289850:CDS | 50.0% | |
ATGGACGAAGCTTCAGACGA+AGG | - | chr2_3:36257625-36257644 | Msa0289850:CDS | 50.0% | |
TTCGGAAGACCCAAGTTCTG+AGG | - | chr2_3:36257875-36257894 | Msa0289850:CDS | 50.0% | |
! | TCGGAAGACCCAAGTTCTGA+GGG | - | chr2_3:36257876-36257895 | Msa0289850:CDS | 50.0% |
CAAACGGTCCCTCAGAACTT+GGG | + | chr2_3:36257887-36257906 | None:intergenic | 50.0% | |
!! | CAAGTTCTGAGGGACCGTTT+GGG | - | chr2_3:36257886-36257905 | Msa0289850:CDS | 50.0% |
!!! | TTCGCGGGAAGGTTTTAGAG+AGG | - | chr2_3:36257936-36257955 | Msa0289850:CDS | 50.0% |
!!! | GGGAAGGTTTTAGAGAGGAC+AGG | - | chr2_3:36257941-36257960 | Msa0289850:CDS | 50.0% |
CCCAGAAATGATACCAGGTG+TGG | - | chr2_3:36257994-36258013 | Msa0289850:CDS | 50.0% | |
TGCGCATAACCACGAGTTGT+TGG | - | chr2_3:36258086-36258105 | Msa0289850:CDS | 50.0% | |
GCAAACCATCCAACAACTCG+TGG | + | chr2_3:36258098-36258117 | None:intergenic | 50.0% | |
TGGGCGACTGCTCATATCAA+AGG | - | chr2_3:36258915-36258934 | Msa0289850:CDS | 50.0% | |
TAAACCCTCACACCGAGATG+TGG | + | chr2_3:36258964-36258983 | None:intergenic | 50.0% | |
TACTGGACCCTACTTGTGTG+AGG | - | chr2_3:36259702-36259721 | Msa0289850:CDS | 50.0% | |
TGTGTGAGGACTAAAGGGTG+TGG | - | chr2_3:36259716-36259735 | Msa0289850:CDS | 50.0% | |
TCTAATCCAATTGCCACGCC+TGG | - | chr2_3:36259740-36259759 | Msa0289850:CDS | 50.0% | |
CCAAACGGTCCCTCAGAACT+TGG | + | chr2_3:36257888-36257907 | None:intergenic | 55.0% | |
!! | CCAAGTTCTGAGGGACCGTT+TGG | - | chr2_3:36257885-36257904 | Msa0289850:CDS | 55.0% |
AGAGGACAGGGGATTGACCT+TGG | - | chr2_3:36257954-36257973 | Msa0289850:CDS | 55.0% | |
ACAGGGGATTGACCTTGGAG+AGG | - | chr2_3:36257959-36257978 | Msa0289850:CDS | 55.0% | |
! | ACGAACCACATCTCGGTGTG+AGG | - | chr2_3:36258956-36258975 | Msa0289850:CDS | 55.0% |
! | CGAACCACATCTCGGTGTGA+GGG | - | chr2_3:36258957-36258976 | Msa0289850:CDS | 55.0% |
TGTCGAAGGATGTGGCTGAG+AGG | - | chr2_3:36259543-36259562 | Msa0289850:CDS | 55.0% | |
GTCGAAGGATGTGGCTGAGA+GGG | - | chr2_3:36259544-36259563 | Msa0289850:CDS | 55.0% | |
AATCCAATTGCCACGCCTGG+TGG | - | chr2_3:36259743-36259762 | Msa0289850:CDS | 55.0% | |
CCAAACGGTCCCTCAGAACT+TGG | + | chr2_3:36257888-36257907 | None:intergenic | 55.0% | |
!! | CCAAGTTCTGAGGGACCGTT+TGG | - | chr2_3:36257885-36257904 | Msa0289850:CDS | 55.0% |
AGAGGACAGGGGATTGACCT+TGG | - | chr2_3:36257954-36257973 | Msa0289850:CDS | 55.0% | |
ACAGGGGATTGACCTTGGAG+AGG | - | chr2_3:36257959-36257978 | Msa0289850:CDS | 55.0% | |
! | ACGAACCACATCTCGGTGTG+AGG | - | chr2_3:36258956-36258975 | Msa0289850:CDS | 55.0% |
! | CGAACCACATCTCGGTGTGA+GGG | - | chr2_3:36258957-36258976 | Msa0289850:CDS | 55.0% |
TGTCGAAGGATGTGGCTGAG+AGG | - | chr2_3:36259543-36259562 | Msa0289850:CDS | 55.0% | |
GTCGAAGGATGTGGCTGAGA+GGG | - | chr2_3:36259544-36259563 | Msa0289850:CDS | 55.0% | |
AATCCAATTGCCACGCCTGG+TGG | - | chr2_3:36259743-36259762 | Msa0289850:CDS | 55.0% | |
GGGGATTGACCTTGGAGAGG+CGG | - | chr2_3:36257962-36257981 | Msa0289850:CDS | 60.0% | |
TTCTCGCTTCCGCCTCTCCA+AGG | + | chr2_3:36257974-36257993 | None:intergenic | 60.0% | |
CTTCCACCAGGCGTGGCAAT+TGG | + | chr2_3:36259749-36259768 | None:intergenic | 60.0% | |
TTGCCACGCCTGGTGGAAGT+AGG | - | chr2_3:36259750-36259769 | Msa0289850:CDS | 60.0% | |
TGAGGACGCCTACTTCCACC+AGG | + | chr2_3:36259761-36259780 | None:intergenic | 60.0% | |
GGGGATTGACCTTGGAGAGG+CGG | - | chr2_3:36257962-36257981 | Msa0289850:CDS | 60.0% | |
TTCTCGCTTCCGCCTCTCCA+AGG | + | chr2_3:36257974-36257993 | None:intergenic | 60.0% | |
CTTCCACCAGGCGTGGCAAT+TGG | + | chr2_3:36259749-36259768 | None:intergenic | 60.0% | |
TTGCCACGCCTGGTGGAAGT+AGG | - | chr2_3:36259750-36259769 | Msa0289850:CDS | 60.0% | |
TGAGGACGCCTACTTCCACC+AGG | + | chr2_3:36259761-36259780 | None:intergenic | 60.0% | |
ACGCCTACTTCCACCAGGCG+TGG | + | chr2_3:36259756-36259775 | None:intergenic | 65.0% | |
ACGCCTACTTCCACCAGGCG+TGG | + | chr2_3:36259756-36259775 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 36257568 | 36259922 | 36257568 | ID=Msa0289850;Name=Msa0289850 |
chr2_3 | mRNA | 36257568 | 36259922 | 36257568 | ID=Msa0289850-mRNA-1;Parent=Msa0289850;Name=Msa0289850-mRNA-1;_AED=0.08;_eAED=0.09;_QI=0|-1|0|1|-1|1|1|0|784 |
chr2_3 | exon | 36257568 | 36259922 | 36257568 | ID=Msa0289850-mRNA-1:exon:11918;Parent=Msa0289850-mRNA-1 |
chr2_3 | CDS | 36257568 | 36259922 | 36257568 | ID=Msa0289850-mRNA-1:cds;Parent=Msa0289850-mRNA-1 |
Gene Sequence |
Protein sequence |