AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0728840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0728840 MtrunA17_Chr1g0203051 44.444 603 322 4 63 655 22 621 0.0 572
Msa0728840 MtrunA17_Chr2g0287651 34.978 689 436 4 104 790 66 744 8.36e-147 456
Msa0728840 MtrunA17_Chr2g0308841 70.354 226 67 0 442 667 1 226 1.89e-118 361
Msa0728840 MtrunA17_Chr5g0448761 32.042 568 374 6 115 671 62 628 1.09e-97 324
Msa0728840 MtrunA17_Chr1g0202341 31.393 567 372 7 111 667 49 608 1.27e-95 315
Msa0728840 MtrunA17_Chr2g0324011 30.233 559 373 8 119 667 16 567 1.31e-83 280
Msa0728840 MtrunA17_Chr8g0363841 29.912 565 383 7 123 678 27 587 5.05e-79 270
Msa0728840 MtrunA17_Chr1g0203721 26.685 742 483 18 51 762 10 720 6.99e-77 269
Msa0728840 MtrunA17_Chr1g0198761 27.568 769 506 19 67 805 1 748 1.29e-75 263
Msa0728840 MtrunA17_Chr5g0441581 27.972 572 358 12 119 665 38 580 3.63e-74 257
Msa0728840 MtrunA17_Chr2g0287061 31.115 601 345 19 89 671 155 704 2.48e-71 251
Msa0728840 MtrunA17_Chr6g0458391 28.305 590 372 13 97 667 207 764 3.90e-70 248
Msa0728840 MtrunA17_Chr6g0458391 29.333 225 135 10 24 239 5 214 6.85e-14 75.9
Msa0728840 MtrunA17_Chr5g0440451 27.697 621 401 13 119 712 49 648 3.10e-68 245
Msa0728840 MtrunA17_Chr2g0296781 29.130 563 371 12 128 676 12 560 3.42e-68 241
Msa0728840 MtrunA17_Chr5g0448511 30.025 393 268 3 277 664 3 393 2.22e-66 232
Msa0728840 MtrunA17_Chr3g0118611 29.581 453 307 6 269 712 96 545 5.96e-65 233
Msa0728840 MtrunA17_Chr1g0207551 28.393 560 381 12 118 667 39 588 1.38e-63 230
Msa0728840 MtrunA17_Chr6g0477261 30.269 446 290 8 245 676 11 449 1.79e-62 224
Msa0728840 MtrunA17_Chr3g0082121 26.437 609 404 13 82 667 2 589 8.86e-62 223
Msa0728840 MtrunA17_Chr3g0080351 25.884 622 417 13 63 667 28 622 1.95e-60 221
Msa0728840 MtrunA17_Chr2g0329031 25.894 699 465 17 106 775 7 681 9.29e-60 218
Msa0728840 MtrunA17_Chr5g0431001 31.265 419 263 8 119 517 67 480 1.02e-59 212
Msa0728840 MtrunA17_Chr2g0276841 27.163 578 377 15 119 672 76 633 1.15e-57 211
Msa0728840 MtrunA17_Chr2g0291581 24.042 574 379 13 118 665 76 618 9.63e-55 202
Msa0728840 MtrunA17_Chr1g0196541 29.197 411 276 5 276 676 155 560 1.22e-53 199
Msa0728840 MtrunA17_Chr2g0290391 25.557 673 427 18 61 703 23 651 2.13e-53 198
Msa0728840 MtrunA17_Chr2g0291591 27.959 490 309 11 114 582 65 531 7.24e-52 191
Msa0728840 MtrunA17_Chr2g0294841 26.622 601 410 14 86 663 11 603 4.96e-51 192
Msa0728840 MtrunA17_Chr8g0389811 34.259 216 126 2 19 234 6 205 2.72e-36 136
Msa0728840 MtrunA17_Chr1g0164591 27.476 313 213 5 194 500 3 307 8.38e-36 138
Msa0728840 MtrunA17_Chr1g0171741 36.000 225 119 5 15 239 59 258 8.71e-35 134
Msa0728840 MtrunA17_Chr2g0331371 48.592 142 69 1 77 218 23 160 2.08e-33 128
Msa0728840 MtrunA17_Chr7g0258861 29.054 296 198 6 112 401 11 300 6.22e-33 129
Msa0728840 MtrunA17_Chr6g0473421 46.429 112 56 1 77 188 23 130 1.52e-26 106
Msa0728840 MtrunA17_Chr1g0172931 44.231 104 58 0 92 195 55 158 1.81e-24 100
Msa0728840 MtrunA17_Chr8g0340801 40.000 105 63 0 224 328 1 105 3.22e-23 95.1
Msa0728840 MtrunA17_Chr1g0193171 21.554 399 246 14 274 649 304 658 8.55e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0728840 AT4G38180.1 30.594 572 385 7 109 671 69 637 5.19e-91 306
Msa0728840 AT3G06250.2 29.749 558 337 12 117 667 194 703 2.95e-71 251
Msa0728840 AT3G06250.1 29.749 558 337 12 117 667 194 703 2.95e-71 251
Msa0728840 AT3G06250.3 29.749 558 337 12 117 667 194 703 2.95e-71 251
Msa0728840 AT5G18960.2 29.715 562 335 14 117 667 215 727 2.69e-70 249
Msa0728840 AT5G18960.1 29.715 562 335 14 117 667 215 727 2.69e-70 249
Msa0728840 AT4G15090.1 27.915 566 391 9 118 673 56 614 1.92e-68 244
Msa0728840 AT4G15090.5 27.915 566 391 9 118 673 56 614 1.92e-68 244
Msa0728840 AT4G15090.3 27.915 566 391 9 118 673 56 614 1.92e-68 244
Msa0728840 AT4G15090.2 27.915 566 391 9 118 673 56 614 1.92e-68 244
Msa0728840 AT4G15090.4 27.915 566 391 9 118 673 56 614 1.92e-68 244
Msa0728840 AT3G22170.2 25.727 688 450 16 59 721 14 665 6.92e-67 240
Msa0728840 AT3G22170.1 25.727 688 450 16 59 721 14 665 6.92e-67 240
Msa0728840 AT2G27110.2 26.439 643 427 12 76 712 20 622 2.78e-64 233
Msa0728840 AT2G27110.1 26.439 643 427 12 76 712 20 622 2.78e-64 233
Msa0728840 AT1G76320.3 28.571 560 372 11 118 667 2 543 7.68e-62 223
Msa0728840 AT1G76320.1 28.571 560 372 11 118 667 2 543 8.92e-62 224
Msa0728840 AT1G76320.4 28.571 560 372 11 118 667 2 543 8.92e-62 224
Msa0728840 AT1G76320.2 28.571 560 372 11 118 667 2 543 1.00e-61 223
Msa0728840 AT2G27110.3 28.146 437 305 4 281 712 45 477 2.02e-61 222
Msa0728840 AT1G10240.2 28.916 581 381 16 119 681 54 620 5.53e-60 218
Msa0728840 AT1G10240.1 28.916 581 381 16 119 681 54 620 5.53e-60 218
Msa0728840 AT2G32250.5 27.076 554 352 11 118 665 43 550 2.65e-57 211
Msa0728840 AT2G32250.2 27.076 554 352 11 118 665 43 550 3.33e-57 211
Msa0728840 AT2G32250.4 27.076 554 352 11 118 665 43 550 3.33e-57 211
Msa0728840 AT2G32250.6 27.076 554 352 11 118 665 43 550 4.65e-57 211
Msa0728840 AT2G32250.1 27.076 554 352 11 118 665 43 550 4.65e-57 211
Msa0728840 AT2G32250.3 27.076 554 352 11 118 665 43 550 4.65e-57 211
Msa0728840 AT2G32250.8 27.076 554 352 11 118 665 2 509 4.67e-57 211
Msa0728840 AT2G32250.7 27.076 554 352 11 118 665 2 509 4.75e-57 211
Msa0728840 AT1G80010.1 29.103 591 370 17 118 678 100 671 7.99e-57 209
Msa0728840 AT1G52520.1 26.758 583 355 16 118 665 90 635 5.75e-54 201
Msa0728840 AT4G19990.3 24.540 652 425 14 105 732 13 621 9.74e-51 192
Msa0728840 AT4G19990.4 24.540 652 425 14 105 732 13 621 9.74e-51 192
Msa0728840 AT4G19990.5 24.540 652 425 14 105 732 13 621 1.03e-50 191
Msa0728840 AT4G19990.6 24.540 652 425 14 105 732 13 621 1.45e-50 191
Msa0728840 AT4G19990.2 24.540 652 425 14 105 732 13 621 1.45e-50 191
Msa0728840 AT4G19990.7 24.540 652 425 14 105 732 27 635 1.54e-50 191
Msa0728840 AT4G38170.1 27.297 370 259 4 320 680 46 414 2.84e-50 186
Msa0728840 AT5G28530.1 26.095 571 385 14 119 665 61 618 4.56e-48 183
Msa0728840 AT5G28530.3 25.919 571 382 14 119 665 61 614 5.38e-48 182
Msa0728840 AT5G28530.2 25.919 571 382 14 119 665 61 614 5.38e-48 182
Msa0728840 AT4G19990.1 24.463 605 391 13 151 732 3 564 1.14e-46 179
Msa0728840 AT5G28530.5 24.014 558 342 16 119 663 61 549 3.12e-30 127
Msa0728840 AT5G28530.4 24.194 558 345 16 119 663 61 553 3.29e-30 127

Find 174 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGTTGTTAGTTGGGTTTC+TGG 0.108006 5_1:+35122247 Msa0728840:CDS
TCCACACCTGGTATCATTTC+TGG 0.155992 5_1:-35119656 None:intergenic
ACACAAATGGTTCACAATAT+TGG 0.219824 5_1:+35121141 Msa0728840:CDS
CACAAATGGTTCACAATATT+GGG 0.257023 5_1:+35121142 Msa0728840:CDS
CATAATCTATGATGTGCTTT+TGG 0.261343 5_1:-35120366 None:intergenic
TGATCCAATTGTTGTCTTGC+AGG 0.279613 5_1:-35120527 None:intergenic
TGAATAAGTTTGAAGAACTA+TGG 0.283312 5_1:+35120481 Msa0728840:CDS
TTGTTGATTCAGGGAGTAGA+AGG 0.286138 5_1:+35119065 Msa0728840:intron
ATTTCAAATGTTCGTGTCTT+AGG 0.296750 5_1:+35120988 Msa0728840:CDS
GGGAATGCTATAGTCATAAA+TGG 0.304640 5_1:+35119385 Msa0728840:CDS
AAGATGCATGTTGGGTGATA+TGG 0.328276 5_1:+35120455 Msa0728840:CDS
TCACCGTTGTTGACTCCTTT+AGG 0.330711 5_1:-35121488 None:intergenic
GTATGTGCAACATACATTAA+AGG 0.333195 5_1:-35120024 None:intergenic
CCTGTGTAAAACTAGATTCT+TGG 0.335728 5_1:-35121081 None:intergenic
ATTGCACCATACGTTTGATA+TGG 0.351243 5_1:-35119862 None:intergenic
CCGTCAGTTATTACAGATAA+AGG 0.354607 5_1:-35120306 None:intergenic
CTCGACATTTGATTGAAGAT+TGG 0.357089 5_1:-35123375 None:intergenic
CCAAGTTCTGAGGGACCGTT+TGG 0.359223 5_1:+35119546 Msa0728840:CDS
GCAGGCTGCTCTCTCTGTGC+AGG 0.371113 5_1:-35123296 None:intergenic
AGATAATTTGCAGCAGCAGC+AGG 0.372479 5_1:-35123314 None:intergenic
CGCAAACTAGTTTGCAATAC+GGG 0.372515 5_1:-35120774 None:intergenic
CAATATTAACATCGAGGAAA+TGG 0.372866 5_1:+35119267 Msa0728840:CDS
CCAAACGGTCCCTCAGAACT+TGG 0.376804 5_1:-35119546 None:intergenic
TTCAGACGAAGGAGATAATA+TGG 0.381516 5_1:+35119297 Msa0728840:CDS
TTGGCCTGCAAGACAACAAT+TGG 0.382041 5_1:+35120523 Msa0728840:CDS
TCCGACTATCATTCCAACTA+TGG 0.385093 5_1:+35120747 Msa0728840:CDS
CTTCCACCAGGCGTAGCAAT+TGG 0.387040 5_1:-35121407 None:intergenic
GTTTCAAAGTACTGTGGAAA+TGG 0.394957 5_1:+35120927 Msa0728840:CDS
CATTCATAGCAGTCGCGAAT+TGG 0.397674 5_1:-35120275 None:intergenic
TAACCCTCTCTCACGGTAGA+AGG 0.398623 5_1:-35117864 Msa0728830:five_prime_UTR
CAATACGGGTTGACCATAGT+TGG 0.402598 5_1:-35120760 None:intergenic
CCACACCTGGTATCATTTCT+GGG 0.408982 5_1:-35119655 None:intergenic
AGCGATTCATCCGAGTCTAA+TGG 0.410491 5_1:+35119364 Msa0728840:CDS
AGAAAATCTCCCTTGTAAAC+TGG 0.412206 5_1:-35120821 None:intergenic
AGTCGTCGACGAAAGTTTAC+TGG 0.423532 5_1:+35121346 Msa0728840:CDS
TAAGGCACCTATGAAATTGC+TGG 0.427921 5_1:-35120698 None:intergenic
TCATGGTATGCAAGGGTAAA+CGG 0.428944 5_1:+35119505 Msa0728840:CDS
TATGTGCAACATACATTAAA+GGG 0.429560 5_1:-35120023 None:intergenic
AAGGATTTGTATAATCAATC+AGG 0.433589 5_1:+35119928 Msa0728840:CDS
CACATCATAGATTATGTGCT+TGG 0.435520 5_1:+35120373 Msa0728840:CDS
GAGATAATATGGATGACAAT+GGG 0.436783 5_1:+35119308 Msa0728840:CDS
GGGATTCTCAAATTGCTTCA+AGG 0.437802 5_1:+35121162 Msa0728840:CDS
CTGTGTAAAACTAGATTCTT+GGG 0.438174 5_1:-35121080 None:intergenic
CCTACTTGTGTGAGGACTAA+AGG 0.444636 5_1:+35121371 Msa0728840:CDS
TGGCCTTTGATGCAACCTAT+AGG 0.445402 5_1:+35120130 Msa0728840:CDS
AGAGACATATGTTTGGTTGT+TGG 0.446496 5_1:+35120251 Msa0728840:CDS
CTACTTGTGTGAGGACTAAA+GGG 0.449197 5_1:+35121372 Msa0728840:CDS
GCGATTCATCCGAGTCTAAT+GGG 0.449731 5_1:+35119365 Msa0728840:CDS
TGTCTTAGGATGGAGTCGTT+TGG 0.452899 5_1:+35121002 Msa0728840:CDS
TATCTTAAAAGATGCATGTT+GGG 0.464075 5_1:+35120447 Msa0728840:CDS
CAAACTGTTGTCTTTGCGAC+AGG 0.466297 5_1:+35120207 Msa0728840:CDS
CTCGAAATCGAAAATATGTA+AGG 0.466417 5_1:-35120716 None:intergenic
TATGTGCTTGGCATCTTCTA+CGG 0.467035 5_1:+35120385 Msa0728840:CDS
CACGAACATTTGAAATCTAC+AGG 0.467229 5_1:-35120981 None:intergenic
AGACGGAAGAGACATATGTT+TGG 0.472860 5_1:+35120244 Msa0728840:CDS
CGGAATGCATCATCGAATGT+TGG 0.473100 5_1:+35120405 Msa0728840:CDS
TGTAGTCAGTGTGGTGTGAT+AGG 0.474905 5_1:+35121446 Msa0728840:CDS
TATTCAGTTGTCGAAGGATG+TGG 0.485194 5_1:+35121196 Msa0728840:CDS
ATACTGTAGACAAAGATAAG+AGG 0.486855 5_1:+35120043 Msa0728840:CDS
GGAATGCATCATCGAATGTT+GGG 0.488653 5_1:+35120406 Msa0728840:CDS
CCTTTAGTCCTCACACAAGT+AGG 0.488782 5_1:-35121371 None:intergenic
TTCTCGCTTCCGCCTCTCCA+AGG 0.489867 5_1:-35119632 None:intergenic
CAGCATCGAACCAGTTTACA+AGG 0.491061 5_1:+35120811 Msa0728840:CDS
GGTGCAATGGCTAATTCATC+AGG 0.491612 5_1:+35119877 Msa0728840:CDS
TCAATCTCAATCAAATCAGT+TGG 0.493229 5_1:-35119814 None:intergenic
TTGCATATAATTTCTACTCA+TGG 0.494106 5_1:+35119488 Msa0728840:CDS
AGAGAACAGGGGATTGACCT+TGG 0.494325 5_1:+35119615 Msa0728840:CDS
TGTTGATTCAGGGAGTAGAA+GGG 0.494387 5_1:+35119066 Msa0728840:intron
GCTTCTGTTGTAGGTTATGG+AGG 0.499576 5_1:+35119213 Msa0728840:intron
CTAAATTCATCAGATATGAA+TGG 0.499723 5_1:+35119101 Msa0728840:CDS
TCGCAAACTAGTTTGCAATA+CGG 0.502777 5_1:-35120775 None:intergenic
TTGCTACGCCTGGTGGAAGT+AGG 0.503186 5_1:+35121411 Msa0728840:CDS
TTTCCTATAGGTTGCATCAA+AGG 0.505303 5_1:-35120133 None:intergenic
CACCGGAGAAAATAACAAAC+GGG 0.508832 5_1:-35120170 None:intergenic
CAGCTGCTGTTCAGCCGAGA+TGG 0.509428 5_1:-35123204 None:intergenic
ACGAACCACGTCTCGGTGTG+AGG 0.515344 5_1:+35120617 Msa0728840:CDS
CAAATTGCTTCAAGGTATGC+GGG 0.516691 5_1:+35121170 Msa0728840:CDS
GGCTTTCTGTTGTGTACTGT+AGG 0.520591 5_1:+35122216 Msa0728840:intron
CTGTTGGATGGTTTGCTATG+TGG 0.521362 5_1:+35119763 Msa0728840:CDS
CAAATGTTCGTGTCTTAGGA+TGG 0.523067 5_1:+35120992 Msa0728840:CDS
AATAAACGATCATGTCCTAA+AGG 0.523227 5_1:+35121473 Msa0728840:CDS
ATTAATGAAGATGATGAAGA+AGG 0.525000 5_1:+35121545 Msa0728840:CDS
GTCGAAGGATGTGGCTGAGA+GGG 0.529678 5_1:+35121205 Msa0728840:CDS
ACACCGGAGAAAATAACAAA+CGG 0.530564 5_1:-35120171 None:intergenic
GAATAAGTTTGAAGAACTAT+GGG 0.530569 5_1:+35120482 Msa0728840:CDS
TAGACATTGTTTCAAAGCGT+TGG 0.530743 5_1:+35119704 Msa0728840:CDS
ATTTCTACTCATGGTATGCA+AGG 0.531446 5_1:+35119497 Msa0728840:CDS
CTGTCGCAAAGACAACAGTT+TGG 0.533935 5_1:-35120206 None:intergenic
TGAAGAACTATGGGAAGAGA+TGG 0.539978 5_1:+35120491 Msa0728840:CDS
CATAACCACGAGCTGTTGGA+TGG 0.541920 5_1:+35119751 Msa0728840:CDS
CGCGACTGCTATGAATGGTA+AGG 0.542367 5_1:+35120281 Msa0728840:CDS
CAAGTTCTGAGGGACCGTTT+GGG 0.542763 5_1:+35119547 Msa0728840:CDS
TGCGCATAACCACGAGCTGT+TGG 0.543217 5_1:+35119747 Msa0728840:CDS
GGTGTTAGCTTTCTATGTGC+CGG 0.543539 5_1:-35119793 None:intergenic
ACTAATCCAATTGCTACGCC+TGG 0.544424 5_1:+35121401 Msa0728840:CDS
GTTGGTATTGATGCTAGCAC+TGG 0.544748 5_1:+35121311 Msa0728840:CDS
AAGAATAAAACAACAACTGT+TGG 0.546824 5_1:+35121293 Msa0728840:CDS
GTTATGCGCAAATTCAAATA+CGG 0.547080 5_1:-35119734 None:intergenic
GATACGCTGCTGAACGCGGT+TGG 0.548463 5_1:+35123341 Msa0728840:CDS
ATAATAATAGTTCCATTGCT+CGG 0.548526 5_1:+35123175 Msa0728840:intron
ATTGAAAAGTATAAGAATGT+TGG 0.559478 5_1:+35119832 Msa0728840:CDS
GGCGCCTTCTACCGTGAGAG+AGG 0.559750 5_1:+35117860 Msa0728840:CDS
CGAACCACGTCTCGGTGTGA+GGG 0.561392 5_1:+35120618 Msa0728840:CDS
GCTGCAGAACATTACCCAAA+CGG 0.563552 5_1:-35119561 None:intergenic
TTGCTCGGAGGTGTCCATCT+CGG 0.564575 5_1:+35123190 Msa0728840:CDS
TGAAATTCAAGAGATGTCCA+TGG 0.566346 5_1:+35120890 Msa0728840:CDS
GTTCGAGCAAGATACACAAA+TGG 0.566756 5_1:+35121128 Msa0728840:CDS
GGAGATAATATGGATGACAA+TGG 0.571879 5_1:+35119307 Msa0728840:CDS
CAATTCGCGACTGCTATGAA+TGG 0.572191 5_1:+35120276 Msa0728840:CDS
TCTGTTGTAGGTTATGGAGG+AGG 0.573234 5_1:+35119216 Msa0728840:intron
TTCGGAAGACCCAAGTTCTG+AGG 0.573488 5_1:+35119536 Msa0728840:CDS
TCAAATTGCTTCAAGGTATG+CGG 0.574162 5_1:+35121169 Msa0728840:CDS
TTTCTGTAGATGTAGTTGAA+AGG 0.575027 5_1:+35119443 Msa0728840:CDS
AATCCAATTGCTACGCCTGG+TGG 0.577075 5_1:+35121404 Msa0728840:CDS
ATATCAAACGTATGGTGCAA+TGG 0.580935 5_1:+35119864 Msa0728840:CDS
CTTTAGTCCTCACACAAGTA+GGG 0.582163 5_1:-35121370 None:intergenic
CCACACTGACTACATGATTG+AGG 0.582317 5_1:-35121437 None:intergenic
GAGAACCCAGAAATGATACC+AGG 0.586155 5_1:+35119650 Msa0728840:CDS
AGATGGACACCTCCGAGCAA+TGG 0.586729 5_1:-35123187 None:intergenic
GTAAGACCATATCAAACGTA+TGG 0.586746 5_1:+35119856 Msa0728840:CDS
AACTTTGTAGATAGAACCCA+TGG 0.589394 5_1:-35120907 None:intergenic
CCTTTATCTGTAATAACTGA+CGG 0.590181 5_1:+35120306 Msa0728840:CDS
CAGGTATACGAACCACGTCT+CGG 0.590615 5_1:+35120610 Msa0728840:CDS
ATTTGTACACACAATCATCT+CGG 0.590993 5_1:-35123398 None:intergenic
GGGGATTGACCTTGGAGAGG+CGG 0.591821 5_1:+35119623 Msa0728840:CDS
ATCAGATATGAATGGATGCA+TGG 0.592737 5_1:+35119109 Msa0728840:CDS
ACCATAGTTGGAATGATAGT+CGG 0.594084 5_1:-35120748 None:intergenic
GCTATAGTCATAAATGGCAT+CGG 0.596967 5_1:+35119391 Msa0728840:CDS
GTAAAACTAGATTCTTGGGA+AGG 0.598080 5_1:-35121076 None:intergenic
GGGAATTATTCAGTTGTCGA+AGG 0.603195 5_1:+35121190 Msa0728840:CDS
TGGGCGACTGCTCATATCAA+AGG 0.603639 5_1:+35120576 Msa0728840:CDS
GAAATTCAAGAGATGTCCAT+GGG 0.603913 5_1:+35120891 Msa0728840:CDS
AGAGGGTTACAAATCCCCTA+TGG 0.604842 5_1:+35117878 Msa0728840:CDS
GAATGGATGCATGGATGATG+AGG 0.606403 5_1:+35119118 Msa0728840:CDS
TTGGTATTGATGCTAGCACT+GGG 0.610032 5_1:+35121312 Msa0728840:CDS
TGCTGATACGCTGCTGAACG+CGG 0.610980 5_1:+35123337 Msa0728840:CDS
ATGCATGTTGGGTGATATGG+AGG 0.613251 5_1:+35120458 Msa0728840:CDS
TCGGAAGACCCAAGTTCTGA+GGG 0.617413 5_1:+35119537 Msa0728840:CDS
TTAGTTTCATCTGACTCTTG+CGG 0.617850 5_1:+35119964 Msa0728840:CDS
GCGCCTTCTACCGTGAGAGA+GGG 0.618968 5_1:+35117861 Msa0728840:CDS
ACAGCAATAATATGATCGCA+AGG 0.619104 5_1:-35121029 None:intergenic
CAAACGGTCCCTCAGAACTT+GGG 0.622569 5_1:-35119545 None:intergenic
ATATCTTAAAAGATGCATGT+TGG 0.624704 5_1:+35120446 Msa0728840:CDS
GCAATGGCTAATTCATCAGG+TGG 0.625760 5_1:+35119880 Msa0728840:CDS
TACTGGACCCTACTTGTGTG+AGG 0.626363 5_1:+35121363 Msa0728840:CDS
TTTCTACTCATGGTATGCAA+GGG 0.627306 5_1:+35119498 Msa0728840:CDS
GCTTTGAAACAATGTCTATG+TGG 0.628276 5_1:-35119699 None:intergenic
ATGGACGAAGCTTCAGACGA+AGG 0.631163 5_1:+35119286 Msa0728840:CDS
AGGTTTAGTTACGAGAGAGA+CGG 0.633832 5_1:+35120227 Msa0728840:CDS
TACAAAGTTTCAAAGTACTG+TGG 0.634037 5_1:+35120921 Msa0728840:CDS
TTGGTTATGATGATTAACAC+CGG 0.637737 5_1:-35120187 None:intergenic
ACTGTGGAAATGGAAGTGTC+TGG 0.638067 5_1:+35120937 Msa0728840:CDS
TATAGCATTCCCATTAGACT+CGG 0.641750 5_1:-35119374 None:intergenic
GAGGGTTTACATAGTCACAT+AGG 0.642304 5_1:+35120636 Msa0728840:CDS
AATGGGGCTAATGAGTGTGA+TGG 0.645283 5_1:+35119325 Msa0728840:CDS
CCCAGAAATGATACCAGGTG+TGG 0.648094 5_1:+35119655 Msa0728840:CDS
AATCTACTTGCTCACCATAG+GGG 0.651568 5_1:-35117892 None:intergenic
TGTCGAAGGATGTGGCTGAG+AGG 0.652941 5_1:+35121204 Msa0728840:CDS
ATAATCAATCAGGAAGACAA+AGG 0.657924 5_1:+35119938 Msa0728840:CDS
GGATTTGTAACCCTCTCTCA+CGG 0.661323 5_1:-35117871 Msa0728830:five_prime_UTR
TAAACCCTCACACCGAGACG+TGG 0.661419 5_1:-35120622 None:intergenic
GCAAACCATCCAACAGCTCG+TGG 0.662133 5_1:-35119756 None:intergenic
ACAGGGGATTGACCTTGGAG+AGG 0.670051 5_1:+35119620 Msa0728840:CDS
TGTGTGAGGACTAAAGGGTG+TGG 0.670824 5_1:+35121377 Msa0728840:CDS
TGAGGACGCCTACTTCCACC+AGG 0.673688 5_1:-35121419 None:intergenic
TACGTGAGTCTGCACTGAGA+TGG 0.681723 5_1:+35123246 Msa0728840:CDS
AGATAATATGGATGACAATG+GGG 0.688595 5_1:+35119309 Msa0728840:CDS
CCTCAATCATGTAGTCAGTG+TGG 0.690892 5_1:+35121437 Msa0728840:CDS
CACTAAGAAAATCTACAATG+CGG 0.712293 5_1:-35121253 None:intergenic
AGCATCGAACCAGTTTACAA+GGG 0.716912 5_1:+35120812 Msa0728840:CDS
ATAATAGTTCCATTGCTCGG+AGG 0.731804 5_1:+35123178 Msa0728840:intron
TAATGACAATATTAACATCG+AGG 0.732342 5_1:+35119261 Msa0728840:CDS
TGTCCTAAAGGAGTCAACAA+CGG 0.735045 5_1:+35121485 Msa0728840:CDS
TGGTATTGATGCTAGCACTG+GGG 0.762460 5_1:+35121313 Msa0728840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAATAAAAGTAAAAAT+GGG - chr5_1:35117962-35117981 None:intergenic 10.0%
!! TCATTAAATAAAAGTAAAAA+TGG - chr5_1:35117963-35117982 None:intergenic 10.0%
!!! ATAAAAATAAAACTGAATTT+TGG - chr5_1:35118279-35118298 None:intergenic 10.0%
!!! TACAGATTTTTTTTTTTAAA+TGG - chr5_1:35118557-35118576 None:intergenic 10.0%
!!! TTTTTCTTAAAACTCAATTT+TGG - chr5_1:35118079-35118098 None:intergenic 15.0%
!! AATAAATTGATGCTAATTAT+TGG + chr5_1:35118672-35118691 Msa0728840:intron 15.0%
!!! TATCTCTTTTTAATTAATGT+GGG - chr5_1:35118818-35118837 None:intergenic 15.0%
!!! TTATCTCTTTTTAATTAATG+TGG - chr5_1:35118819-35118838 None:intergenic 15.0%
!! TAAATGATACTTATTATGAA+TGG + chr5_1:35122015-35122034 Msa0728840:intron 15.0%
!!! TATTCATTTTTATAAACTCA+CGG + chr5_1:35122821-35122840 Msa0728840:intron 15.0%
!!! TTTTTTTAAATGGTGAGAAT+TGG - chr5_1:35118547-35118566 None:intergenic 20.0%
!!! TTTTTTAGAATCAATAAGCT+GGG - chr5_1:35118652-35118671 None:intergenic 20.0%
!!! TTTTTTTAGAATCAATAAGC+TGG - chr5_1:35118653-35118672 None:intergenic 20.0%
!! AATGAATGAAAAAGGTTAAT+GGG - chr5_1:35118868-35118887 None:intergenic 20.0%
!! AAATGAATGAAAAAGGTTAA+TGG - chr5_1:35118869-35118888 None:intergenic 20.0%
!! GTAAGTAAAAAGTGATTATT+AGG + chr5_1:35119143-35119162 Msa0728840:intron 20.0%
!!! ATTGAAAAGTATAAGAATGT+TGG + chr5_1:35119832-35119851 Msa0728840:CDS 20.0%
!!! CGTATGAATTATGAAATTTT+TGG + chr5_1:35120099-35120118 Msa0728840:CDS 20.0%
!!! ATTGTATTTGTTTTTCCTAT+AGG - chr5_1:35120148-35120167 None:intergenic 20.0%
!!! TTTTGGAAATATACTCTTTA+TGG - chr5_1:35120352-35120371 None:intergenic 20.0%
!!! AATTATAGGTTTTCTTTCTT+TGG + chr5_1:35122635-35122654 Msa0728840:intron 20.0%
!!! ATTATAGGTTTTCTTTCTTT+GGG + chr5_1:35122636-35122655 Msa0728840:intron 20.0%
!! AAATATTTGACCAAAAAGAT+AGG + chr5_1:35122938-35122957 Msa0728840:intron 20.0%
! CATATTTGTTTGTAAGAAGA+TGG - chr5_1:35118136-35118155 None:intergenic 25.0%
! ACCATTATATTTGACATTGA+TGG + chr5_1:35118390-35118409 Msa0728840:intron 25.0%
!! CCACATTTTCAATATATACA+CGG - chr5_1:35118765-35118784 None:intergenic 25.0%
! AGTAGGAAAATGAATGAAAA+AGG - chr5_1:35118876-35118895 None:intergenic 25.0%
! TCATCTATAATATCATCAGT+AGG - chr5_1:35118893-35118912 None:intergenic 25.0%
! TAATGTTGAAAATGTGTCTA+AGG - chr5_1:35118960-35118979 None:intergenic 25.0%
!!! ATCATATGTATTGTTGATTC+AGG + chr5_1:35119055-35119074 Msa0728840:intron 25.0%
!!! TCATATGTATTGTTGATTCA+GGG + chr5_1:35119056-35119075 Msa0728840:intron 25.0%
! CTAAATTCATCAGATATGAA+TGG + chr5_1:35119101-35119120 Msa0728840:CDS 25.0%
! TAAAATTATGCTTCTGTTGT+AGG + chr5_1:35119204-35119223 Msa0728840:intron 25.0%
! TAATGACAATATTAACATCG+AGG + chr5_1:35119261-35119280 Msa0728840:CDS 25.0%
! TTGCATATAATTTCTACTCA+TGG + chr5_1:35119488-35119507 Msa0728840:CDS 25.0%
! AAGGATTTGTATAATCAATC+AGG + chr5_1:35119928-35119947 Msa0728840:CDS 25.0%
! TATGTGCAACATACATTAAA+GGG - chr5_1:35120026-35120045 None:intergenic 25.0%
!!! TGAAATTTTTGGTGATGTAT+TGG + chr5_1:35120110-35120129 Msa0728840:CDS 25.0%
! ATATCTTAAAAGATGCATGT+TGG + chr5_1:35120446-35120465 Msa0728840:CDS 25.0%
! TATCTTAAAAGATGCATGTT+GGG + chr5_1:35120447-35120466 Msa0728840:CDS 25.0%
! TGAATAAGTTTGAAGAACTA+TGG + chr5_1:35120481-35120500 Msa0728840:CDS 25.0%
! GAATAAGTTTGAAGAACTAT+GGG + chr5_1:35120482-35120501 Msa0728840:CDS 25.0%
! TGTATGCAAAAAAAAGAATG+TGG + chr5_1:35120556-35120575 Msa0728840:CDS 25.0%
! GTATGCAAAAAAAAGAATGT+GGG + chr5_1:35120557-35120576 Msa0728840:CDS 25.0%
!!! AAGATTTTTTCAGAGCATTA+CGG - chr5_1:35120854-35120873 None:intergenic 25.0%
! AAGAATAAAACAACAACTGT+TGG + chr5_1:35121293-35121312 Msa0728840:CDS 25.0%
! ATTAATGAAGATGATGAAGA+AGG + chr5_1:35121545-35121564 Msa0728840:CDS 25.0%
! TATTATTTACTGATGCAGAT+TGG + chr5_1:35121662-35121681 Msa0728840:intron 25.0%
!! ATGTTGGTTAAAACCTTATA+TGG + chr5_1:35121701-35121720 Msa0728840:intron 25.0%
!! TAAGTAACACATTGTCTTTT+TGG - chr5_1:35121860-35121879 None:intergenic 25.0%
! ATATGTATGTTGATGTATTG+TGG + chr5_1:35121879-35121898 Msa0728840:intron 25.0%
!! ATTGAATGTGTTTTATGTGT+TGG + chr5_1:35121952-35121971 Msa0728840:intron 25.0%
!!! AGTTTTTTGTTGTTGTTAGT+TGG + chr5_1:35122239-35122258 Msa0728840:CDS 25.0%
!!! GTTTTTTGTTGTTGTTAGTT+GGG + chr5_1:35122240-35122259 Msa0728840:CDS 25.0%
! TACAAGGGATTTACTATATA+AGG + chr5_1:35122597-35122616 Msa0728840:intron 25.0%
! ACAAGGGATTTACTATATAA+GGG + chr5_1:35122598-35122617 Msa0728840:intron 25.0%
! CTTGTAATCAAGTTATATGA+TGG + chr5_1:35122668-35122687 Msa0728840:intron 25.0%
! TAATGAGGCAAGATTATTAT+TGG + chr5_1:35122890-35122909 Msa0728840:intron 25.0%
!! TAAGTTCTTTCCTATCTTTT+TGG - chr5_1:35122951-35122970 None:intergenic 25.0%
! GAGAAATGAATAACATACAT+AGG + chr5_1:35123026-35123045 Msa0728840:intron 25.0%
! ATAATAATAGTTCCATTGCT+CGG + chr5_1:35123175-35123194 Msa0728840:intron 25.0%
!!! TTGTTTTTGGACAAAAGGTA+TGG - chr5_1:35118023-35118042 None:intergenic 30.0%
TGTTGAATGAGAAGAAGATA+AGG - chr5_1:35118055-35118074 None:intergenic 30.0%
! ACAGAACAGATTTGTTCATA+AGG - chr5_1:35118168-35118187 None:intergenic 30.0%
AACAGAAGAATTCAGTTTGA+AGG - chr5_1:35118315-35118334 None:intergenic 30.0%
GCCATCAATGTCAAATATAA+TGG - chr5_1:35118394-35118413 None:intergenic 30.0%
CCGTGTATATATTGAAAATG+TGG + chr5_1:35118762-35118781 Msa0728840:intron 30.0%
CAATATTAACATCGAGGAAA+TGG + chr5_1:35119267-35119286 Msa0728840:CDS 30.0%
GAGATAATATGGATGACAAT+GGG + chr5_1:35119308-35119327 Msa0728840:CDS 30.0%
AGATAATATGGATGACAATG+GGG + chr5_1:35119309-35119328 Msa0728840:CDS 30.0%
!! CATCGGTGATATTTTAAAGA+TGG + chr5_1:35119408-35119427 Msa0728840:CDS 30.0%
TTTCTGTAGATGTAGTTGAA+AGG + chr5_1:35119443-35119462 Msa0728840:CDS 30.0%
!! AGCAAACTTTTGTTTGTTCA+CGG + chr5_1:35119581-35119600 Msa0728840:CDS 30.0%
GTTATGCGCAAATTCAAATA+CGG - chr5_1:35119737-35119756 None:intergenic 30.0%
TCAATCTCAATCAAATCAGT+TGG - chr5_1:35119817-35119836 None:intergenic 30.0%
!! CAAGTTAGGTTTTGTGAAAA+AGG + chr5_1:35119909-35119928 Msa0728840:CDS 30.0%
ATAATCAATCAGGAAGACAA+AGG + chr5_1:35119938-35119957 Msa0728840:CDS 30.0%
GTATGTGCAACATACATTAA+AGG - chr5_1:35120027-35120046 None:intergenic 30.0%
ATACTGTAGACAAAGATAAG+AGG + chr5_1:35120043-35120062 Msa0728840:CDS 30.0%
TTGGTTATGATGATTAACAC+CGG - chr5_1:35120190-35120209 None:intergenic 30.0%
CCTTTATCTGTAATAACTGA+CGG + chr5_1:35120306-35120325 Msa0728840:CDS 30.0%
! CATAATCTATGATGTGCTTT+TGG - chr5_1:35120369-35120388 None:intergenic 30.0%
GAAGAGATGGTTGAAAAATT+TGG + chr5_1:35120504-35120523 Msa0728840:CDS 30.0%
!!! ATCAAAGGAGAATTTTTTGC+AGG + chr5_1:35120591-35120610 Msa0728840:CDS 30.0%
! ATTTTGTCCAGCAATTTCAT+AGG + chr5_1:35120691-35120710 Msa0728840:CDS 30.0%
CTCGAAATCGAAAATATGTA+AGG - chr5_1:35120719-35120738 None:intergenic 30.0%
!! TACAAAGTTTCAAAGTACTG+TGG + chr5_1:35120921-35120940 Msa0728840:CDS 30.0%
ATTTCAAATGTTCGTGTCTT+AGG + chr5_1:35120988-35121007 Msa0728840:CDS 30.0%
!!! TATTGCTGTTTTGATGTATC+TGG + chr5_1:35121043-35121062 Msa0728840:CDS 30.0%
CTGTGTAAAACTAGATTCTT+GGG - chr5_1:35121083-35121102 None:intergenic 30.0%
ACACAAATGGTTCACAATAT+TGG + chr5_1:35121141-35121160 Msa0728840:CDS 30.0%
CACAAATGGTTCACAATATT+GGG + chr5_1:35121142-35121161 Msa0728840:CDS 30.0%
CACTAAGAAAATCTACAATG+CGG - chr5_1:35121256-35121275 None:intergenic 30.0%
AATAAACGATCATGTCCTAA+AGG + chr5_1:35121473-35121492 Msa0728840:CDS 30.0%
TGTATTGTTTGTTTGTAGTC+TGG + chr5_1:35121766-35121785 Msa0728840:intron 30.0%
GTTGTGTTAGTAATGTAATG+TGG + chr5_1:35121824-35121843 Msa0728840:intron 30.0%
GTTGATGTATTGTGGTTTAA+TGG + chr5_1:35121887-35121906 Msa0728840:intron 30.0%
! GGTATCAATGACATTTTCTT+AGG + chr5_1:35121908-35121927 Msa0728840:intron 30.0%
! TGTGTTGGCATATCTATTTA+TGG + chr5_1:35121967-35121986 Msa0728840:intron 30.0%
ATACTTATTATGAATGGTGC+TGG + chr5_1:35122021-35122040 Msa0728840:intron 30.0%
CAGAACAAGAACAAAATAAC+AGG - chr5_1:35122283-35122302 None:intergenic 30.0%
GTTGCGTATTAAATCTGAAA+CGG - chr5_1:35122309-35122328 None:intergenic 30.0%
AAAATTTCGTTAGAGCCAAT+TGG + chr5_1:35122538-35122557 Msa0728840:intron 30.0%
!! TTGAGTTGAGTGTGAATTAT+AGG + chr5_1:35122621-35122640 Msa0728840:intron 30.0%
CTTTGCTCACTTAAAATAGA+GGG - chr5_1:35122756-35122775 None:intergenic 30.0%
! CAAATTAAAGTCTTGTCTCA+AGG + chr5_1:35122984-35123003 Msa0728840:intron 30.0%
TCAAAAATTGAGTAGAAGAG+AGG + chr5_1:35123064-35123083 Msa0728840:intron 30.0%
ATAATAGTTTCTGCACATCT+CGG + chr5_1:35123141-35123160 Msa0728840:intron 30.0%
AAATCTACTTGCTCACCATA+GGG - chr5_1:35117896-35117915 None:intergenic 35.0%
AAAATCTACTTGCTCACCAT+AGG - chr5_1:35117897-35117916 None:intergenic 35.0%
! GTGAGCAAGTAGATTTTTAC+CGG + chr5_1:35117900-35117919 Msa0728840:intron 35.0%
!!! GAGTGTTGTTTTTGGACAAA+AGG - chr5_1:35118028-35118047 None:intergenic 35.0%
ATCAGATATGAATGGATGCA+TGG + chr5_1:35119109-35119128 Msa0728840:CDS 35.0%
!!! AGGTATTTACTTTTGAAGCG+AGG + chr5_1:35119163-35119182 Msa0728840:intron 35.0%
TATGCTTCTGTTGTAGGTTA+TGG + chr5_1:35119210-35119229 Msa0728840:intron 35.0%
TTCAGACGAAGGAGATAATA+TGG + chr5_1:35119297-35119316 Msa0728840:CDS 35.0%
GGAGATAATATGGATGACAA+TGG + chr5_1:35119307-35119326 Msa0728840:CDS 35.0%
TATAGCATTCCCATTAGACT+CGG - chr5_1:35119377-35119396 None:intergenic 35.0%
GGGAATGCTATAGTCATAAA+TGG + chr5_1:35119385-35119404 Msa0728840:CDS 35.0%
GCTATAGTCATAAATGGCAT+CGG + chr5_1:35119391-35119410 Msa0728840:CDS 35.0%
ATTTCTACTCATGGTATGCA+AGG + chr5_1:35119497-35119516 Msa0728840:CDS 35.0%
TTTCTACTCATGGTATGCAA+GGG + chr5_1:35119498-35119517 Msa0728840:CDS 35.0%
!! GCAAACTTTTGTTTGTTCAC+GGG + chr5_1:35119582-35119601 Msa0728840:CDS 35.0%
!! GCTTTGAAACAATGTCTATG+TGG - chr5_1:35119702-35119721 None:intergenic 35.0%
TAGACATTGTTTCAAAGCGT+TGG + chr5_1:35119704-35119723 Msa0728840:CDS 35.0%
!! TTTGCTATGTGGTCTTTTAC+CGG + chr5_1:35119774-35119793 Msa0728840:CDS 35.0%
GTAAGACCATATCAAACGTA+TGG + chr5_1:35119856-35119875 Msa0728840:CDS 35.0%
ATTGCACCATACGTTTGATA+TGG - chr5_1:35119865-35119884 None:intergenic 35.0%
ATATCAAACGTATGGTGCAA+TGG + chr5_1:35119864-35119883 Msa0728840:CDS 35.0%
TTAGTTTCATCTGACTCTTG+CGG + chr5_1:35119964-35119983 Msa0728840:CDS 35.0%
TTTCCTATAGGTTGCATCAA+AGG - chr5_1:35120136-35120155 None:intergenic 35.0%
ACACCGGAGAAAATAACAAA+CGG - chr5_1:35120174-35120193 None:intergenic 35.0%
AGAGACATATGTTTGGTTGT+TGG + chr5_1:35120251-35120270 Msa0728840:CDS 35.0%
CCGTCAGTTATTACAGATAA+AGG - chr5_1:35120309-35120328 None:intergenic 35.0%
CACATCATAGATTATGTGCT+TGG + chr5_1:35120373-35120392 Msa0728840:CDS 35.0%
ACCATAGTTGGAATGATAGT+CGG - chr5_1:35120751-35120770 None:intergenic 35.0%
! TCGCAAACTAGTTTGCAATA+CGG - chr5_1:35120778-35120797 None:intergenic 35.0%
AGAAAATCTCCCTTGTAAAC+TGG - chr5_1:35120824-35120843 None:intergenic 35.0%
!! TTTTCAGAGCATTACGGAAA+AGG - chr5_1:35120848-35120867 None:intergenic 35.0%
TGAAATTCAAGAGATGTCCA+TGG + chr5_1:35120890-35120909 Msa0728840:CDS 35.0%
GAAATTCAAGAGATGTCCAT+GGG + chr5_1:35120891-35120910 Msa0728840:CDS 35.0%
AACTTTGTAGATAGAACCCA+TGG - chr5_1:35120910-35120929 None:intergenic 35.0%
!! GTTTCAAAGTACTGTGGAAA+TGG + chr5_1:35120927-35120946 Msa0728840:CDS 35.0%
! CACGAACATTTGAAATCTAC+AGG - chr5_1:35120984-35121003 None:intergenic 35.0%
ACAGCAATAATATGATCGCA+AGG - chr5_1:35121032-35121051 None:intergenic 35.0%
GTAAAACTAGATTCTTGGGA+AGG - chr5_1:35121079-35121098 None:intergenic 35.0%
CCTGTGTAAAACTAGATTCT+TGG - chr5_1:35121084-35121103 None:intergenic 35.0%
!!! CCAAGAATCTAGTTTTACAC+AGG + chr5_1:35121081-35121100 Msa0728840:CDS 35.0%
!!! AGAATCTAGTTTTACACAGG+TGG + chr5_1:35121084-35121103 Msa0728840:CDS 35.0%
TCAAATTGCTTCAAGGTATG+CGG + chr5_1:35121169-35121188 Msa0728840:CDS 35.0%
!! TTCTTAGTGCTGAACTTTTG+AGG + chr5_1:35121267-35121286 Msa0728840:CDS 35.0%
CTTGACAGTTTCTCCATATA+AGG - chr5_1:35121717-35121736 None:intergenic 35.0%
ATATGGAGAAACTGTCAAGA+CGG + chr5_1:35121718-35121737 Msa0728840:intron 35.0%
TACATTAACCATAAACCCAC+CGG - chr5_1:35121750-35121769 None:intergenic 35.0%
!! ACACATTGTCTTTTTGGTGA+GGG - chr5_1:35121854-35121873 None:intergenic 35.0%
!! AACACATTGTCTTTTTGGTG+AGG - chr5_1:35121855-35121874 None:intergenic 35.0%
!!! TTCTGGTTTTTACCTTCTAC+AGG + chr5_1:35122195-35122214 Msa0728840:intron 35.0%
GCTAATAGACAATCAAACAG+AGG + chr5_1:35122365-35122384 Msa0728840:intron 35.0%
! TACTTCATGAAATGCTGCTT+AGG + chr5_1:35122418-35122437 Msa0728840:intron 35.0%
GTTATGCTATGTATGATGCT+AGG + chr5_1:35122444-35122463 Msa0728840:intron 35.0%
TGCAAATACACAGACTTACA+AGG + chr5_1:35122581-35122600 Msa0728840:intron 35.0%
GCAAATACACAGACTTACAA+GGG + chr5_1:35122582-35122601 Msa0728840:intron 35.0%
ATTACTTTGTCATGAGAGAG+AGG - chr5_1:35122717-35122736 None:intergenic 35.0%
CCTTTGCTCACTTAAAATAG+AGG - chr5_1:35122757-35122776 None:intergenic 35.0%
!! CCTCTATTTTAAGTGAGCAA+AGG + chr5_1:35122754-35122773 Msa0728840:intron 35.0%
TTTAAGTGAGCAAAGGATGA+AGG + chr5_1:35122761-35122780 Msa0728840:intron 35.0%
TTAAGTGAGCAAAGGATGAA+GGG + chr5_1:35122762-35122781 Msa0728840:intron 35.0%
TTTAGACAAGGCTCTCTTTA+TGG + chr5_1:35122861-35122880 Msa0728840:intron 35.0%
CTCGACATTTGATTGAAGAT+TGG - chr5_1:35123378-35123397 None:intergenic 35.0%
AATCTACTTGCTCACCATAG+GGG - chr5_1:35117895-35117914 None:intergenic 40.0%
!!! AAGGACGTGAGTGTTGTTTT+TGG - chr5_1:35118036-35118055 None:intergenic 40.0%
ATCCAAACCAAGCAAAGCTA+AGG + chr5_1:35118228-35118247 Msa0728840:intron 40.0%
TCCAAACCAAGCAAAGCTAA+GGG + chr5_1:35118229-35118248 Msa0728840:intron 40.0%
! AAGGGACTCTTTGTGTTGTT+AGG + chr5_1:35118247-35118266 Msa0728840:intron 40.0%
! TTGATGGCCATATGTGTATG+CGG + chr5_1:35118406-35118425 Msa0728840:intron 40.0%
! ATAAGCACCGCATACACATA+TGG - chr5_1:35118416-35118435 None:intergenic 40.0%
GTGTCTAAGGAGATCAAACT+AGG - chr5_1:35118947-35118966 None:intergenic 40.0%
!! TTGTTGATTCAGGGAGTAGA+AGG + chr5_1:35119065-35119084 Msa0728840:intron 40.0%
!! TGTTGATTCAGGGAGTAGAA+GGG + chr5_1:35119066-35119085 Msa0728840:intron 40.0%
TCATGGTATGCAAGGGTAAA+CGG + chr5_1:35119505-35119524 Msa0728840:CDS 40.0%
!! GGGTAAACGGATTTTCTGTT+CGG + chr5_1:35119518-35119537 Msa0728840:CDS 40.0%
!! ACTTTTGTTTGTTCACGGGA+AGG + chr5_1:35119586-35119605 Msa0728840:CDS 40.0%
!!! GGAAGGTTTTAGAGAGAACA+GGG + chr5_1:35119603-35119622 Msa0728840:CDS 40.0%
!!! GAAGGTTTTAGAGAGAACAG+GGG + chr5_1:35119604-35119623 Msa0728840:CDS 40.0%
! TCAGGTGGTTTTCACAAGTT+AGG + chr5_1:35119895-35119914 Msa0728840:CDS 40.0%
!!! AGAGGCTTGAACGTCTTTTT+TGG + chr5_1:35120061-35120080 Msa0728840:CDS 40.0%
!!! GAACGTCTTTTTTGGTGTGA+TGG + chr5_1:35120069-35120088 Msa0728840:CDS 40.0%
!!! TGCCCGTTTGTTATTTTCTC+CGG + chr5_1:35120168-35120187 Msa0728840:CDS 40.0%
CACCGGAGAAAATAACAAAC+GGG - chr5_1:35120173-35120192 None:intergenic 40.0%
AGGTTTAGTTACGAGAGAGA+CGG + chr5_1:35120227-35120246 Msa0728840:CDS 40.0%
AGACGGAAGAGACATATGTT+TGG + chr5_1:35120244-35120263 Msa0728840:CDS 40.0%
TATGTGCTTGGCATCTTCTA+CGG + chr5_1:35120385-35120404 Msa0728840:CDS 40.0%
GGAATGCATCATCGAATGTT+GGG + chr5_1:35120406-35120425 Msa0728840:CDS 40.0%
AAGATGCATGTTGGGTGATA+TGG + chr5_1:35120455-35120474 Msa0728840:CDS 40.0%
TGAAGAACTATGGGAAGAGA+TGG + chr5_1:35120491-35120510 Msa0728840:CDS 40.0%
TGATCCAATTGTTGTCTTGC+AGG - chr5_1:35120530-35120549 None:intergenic 40.0%
GAGGGTTTACATAGTCACAT+AGG + chr5_1:35120636-35120655 Msa0728840:CDS 40.0%
! TAAGGCACCTATGAAATTGC+TGG - chr5_1:35120701-35120720 None:intergenic 40.0%
TCCGACTATCATTCCAACTA+TGG + chr5_1:35120747-35120766 Msa0728840:CDS 40.0%
! CGCAAACTAGTTTGCAATAC+GGG - chr5_1:35120777-35120796 None:intergenic 40.0%
! AGCATCGAACCAGTTTACAA+GGG + chr5_1:35120812-35120831 Msa0728840:CDS 40.0%
CAAATGTTCGTGTCTTAGGA+TGG + chr5_1:35120992-35121011 Msa0728840:CDS 40.0%
GTTCGAGCAAGATACACAAA+TGG + chr5_1:35121128-35121147 Msa0728840:CDS 40.0%
GGGATTCTCAAATTGCTTCA+AGG + chr5_1:35121162-35121181 Msa0728840:CDS 40.0%
CAAATTGCTTCAAGGTATGC+GGG + chr5_1:35121170-35121189 Msa0728840:CDS 40.0%
GGGAATTATTCAGTTGTCGA+AGG + chr5_1:35121190-35121209 Msa0728840:CDS 40.0%
TATTCAGTTGTCGAAGGATG+TGG + chr5_1:35121196-35121215 Msa0728840:CDS 40.0%
!! TTGGTATTGATGCTAGCACT+GGG + chr5_1:35121312-35121331 Msa0728840:CDS 40.0%
CTTTAGTCCTCACACAAGTA+GGG - chr5_1:35121373-35121392 None:intergenic 40.0%
CTACTTGTGTGAGGACTAAA+GGG + chr5_1:35121372-35121391 Msa0728840:CDS 40.0%
TGTCCTAAAGGAGTCAACAA+CGG + chr5_1:35121485-35121504 Msa0728840:CDS 40.0%
! AATGAGCTCGTAGTTGATGT+TGG + chr5_1:35121685-35121704 Msa0728840:intron 40.0%
!! CACATTGTCTTTTTGGTGAG+GGG - chr5_1:35121853-35121872 None:intergenic 40.0%
!! AATAACAGAAGTGCTGCAAC+AGG - chr5_1:35121996-35122015 None:intergenic 40.0%
!! GTCTTAGAGAGTGTCTGATT+CGG + chr5_1:35122045-35122064 Msa0728840:intron 40.0%
!! ATTCGGTAAGAGACTGGTTT+CGG + chr5_1:35122062-35122081 Msa0728840:intron 40.0%
! GTCTTGTATATGTTAGCCTC+AGG + chr5_1:35122144-35122163 Msa0728840:intron 40.0%
!!! TTAGCAGTGGCTGTTTTTTC+TGG + chr5_1:35122178-35122197 Msa0728840:intron 40.0%
! GTTGTTGTTAGTTGGGTTTC+TGG + chr5_1:35122247-35122266 Msa0728840:CDS 40.0%
TTAATACGCAACAGCTGTAG+TGG + chr5_1:35122317-35122336 Msa0728840:intron 40.0%
! TCATGAAATGCTGCTTAGGA+AGG + chr5_1:35122422-35122441 Msa0728840:intron 40.0%
GTTTCGAAGGTGAATGAATG+TGG + chr5_1:35122471-35122490 Msa0728840:intron 40.0%
TTCGTTAGAGCCAATTGGAT+TGG + chr5_1:35122543-35122562 Msa0728840:intron 40.0%
TTCAACACTGCCAATCCAAT+TGG - chr5_1:35122556-35122575 None:intergenic 40.0%
TCTTTATGGCGTGACTAATG+AGG + chr5_1:35122875-35122894 Msa0728840:intron 40.0%
ATAATAGTTCCATTGCTCGG+AGG + chr5_1:35123178-35123197 Msa0728840:intron 40.0%
GGATTTGTAACCCTCTCTCA+CGG - chr5_1:35117874-35117893 Msa0728830:five_prime_UTR 45.0%
AGAGGGTTACAAATCCCCTA+TGG + chr5_1:35117878-35117897 Msa0728840:CDS 45.0%
CCTGCTGAACTTGTAATTGC+CGG - chr5_1:35117922-35117941 None:intergenic 45.0%
!! CTTTGCTTGGTTTGGATCTC+GGG - chr5_1:35118225-35118244 None:intergenic 45.0%
!! GCTTTGCTTGGTTTGGATCT+CGG - chr5_1:35118226-35118245 None:intergenic 45.0%
!! TCCCTTAGCTTTGCTTGGTT+TGG - chr5_1:35118233-35118252 None:intergenic 45.0%
!! AAGAGTCCCTTAGCTTTGCT+TGG - chr5_1:35118238-35118257 None:intergenic 45.0%
GTGAACTGTCACATGGATGA+AGG - chr5_1:35118743-35118762 None:intergenic 45.0%
ATACACGGTGAACTGTCACA+TGG - chr5_1:35118750-35118769 None:intergenic 45.0%
CATTGAGGCAGTTGCAAATC+AGG - chr5_1:35118916-35118935 None:intergenic 45.0%
TTGCAACTGCCTCAATGTTG+TGG + chr5_1:35118919-35118938 Msa0728840:intron 45.0%
! AACTAGGTGCCACAACATTG+AGG - chr5_1:35118931-35118950 None:intergenic 45.0%
GAATGGATGCATGGATGATG+AGG + chr5_1:35119118-35119137 Msa0728840:CDS 45.0%
GCTTCTGTTGTAGGTTATGG+AGG + chr5_1:35119213-35119232 Msa0728840:intron 45.0%
TCTGTTGTAGGTTATGGAGG+AGG + chr5_1:35119216-35119235 Msa0728840:intron 45.0%
AATGGGGCTAATGAGTGTGA+TGG + chr5_1:35119325-35119344 Msa0728840:CDS 45.0%
AGCGATTCATCCGAGTCTAA+TGG + chr5_1:35119364-35119383 Msa0728840:CDS 45.0%
GCGATTCATCCGAGTCTAAT+GGG + chr5_1:35119365-35119384 Msa0728840:CDS 45.0%
GCTGCAGAACATTACCCAAA+CGG - chr5_1:35119564-35119583 None:intergenic 45.0%
!!! GGGAAGGTTTTAGAGAGAAC+AGG + chr5_1:35119602-35119621 Msa0728840:CDS 45.0%
GAGAACCCAGAAATGATACC+AGG + chr5_1:35119650-35119669 Msa0728840:CDS 45.0%
CCACACCTGGTATCATTTCT+GGG - chr5_1:35119658-35119677 None:intergenic 45.0%
TCCACACCTGGTATCATTTC+TGG - chr5_1:35119659-35119678 None:intergenic 45.0%
! TTTTGCAGAACATCCACACC+TGG - chr5_1:35119671-35119690 None:intergenic 45.0%
!! CTGTTGGATGGTTTGCTATG+TGG + chr5_1:35119763-35119782 Msa0728840:CDS 45.0%
!! GGTGTTAGCTTTCTATGTGC+CGG - chr5_1:35119796-35119815 None:intergenic 45.0%
GGTGCAATGGCTAATTCATC+AGG + chr5_1:35119877-35119896 Msa0728840:CDS 45.0%
GCAATGGCTAATTCATCAGG+TGG + chr5_1:35119880-35119899 Msa0728840:CDS 45.0%
TGGCCTTTGATGCAACCTAT+AGG + chr5_1:35120130-35120149 Msa0728840:CDS 45.0%
CTGTCGCAAAGACAACAGTT+TGG - chr5_1:35120209-35120228 None:intergenic 45.0%
CAAACTGTTGTCTTTGCGAC+AGG + chr5_1:35120207-35120226 Msa0728840:CDS 45.0%
CATTCATAGCAGTCGCGAAT+TGG - chr5_1:35120278-35120297 None:intergenic 45.0%
CAATTCGCGACTGCTATGAA+TGG + chr5_1:35120276-35120295 Msa0728840:CDS 45.0%
CGGAATGCATCATCGAATGT+TGG + chr5_1:35120405-35120424 Msa0728840:CDS 45.0%
ATGCATGTTGGGTGATATGG+AGG + chr5_1:35120458-35120477 Msa0728840:CDS 45.0%
TTGGCCTGCAAGACAACAAT+TGG + chr5_1:35120523-35120542 Msa0728840:CDS 45.0%
! CAATACGGGTTGACCATAGT+TGG - chr5_1:35120763-35120782 None:intergenic 45.0%
! CAGCATCGAACCAGTTTACA+AGG + chr5_1:35120811-35120830 Msa0728840:CDS 45.0%
!! ACTGTGGAAATGGAAGTGTC+TGG + chr5_1:35120937-35120956 Msa0728840:CDS 45.0%
TGTCTTAGGATGGAGTCGTT+TGG + chr5_1:35121002-35121021 Msa0728840:CDS 45.0%
!! GTTGGTATTGATGCTAGCAC+TGG + chr5_1:35121311-35121330 Msa0728840:CDS 45.0%
!! TGGTATTGATGCTAGCACTG+GGG + chr5_1:35121313-35121332 Msa0728840:CDS 45.0%
AGTCGTCGACGAAAGTTTAC+TGG + chr5_1:35121346-35121365 Msa0728840:CDS 45.0%
CCTTTAGTCCTCACACAAGT+AGG - chr5_1:35121374-35121393 None:intergenic 45.0%
CCTACTTGTGTGAGGACTAA+AGG + chr5_1:35121371-35121390 Msa0728840:CDS 45.0%
ACTAATCCAATTGCTACGCC+TGG + chr5_1:35121401-35121420 Msa0728840:CDS 45.0%
! CCACACTGACTACATGATTG+AGG - chr5_1:35121440-35121459 None:intergenic 45.0%
CCTCAATCATGTAGTCAGTG+TGG + chr5_1:35121437-35121456 Msa0728840:CDS 45.0%
TGTAGTCAGTGTGGTGTGAT+AGG + chr5_1:35121446-35121465 Msa0728840:CDS 45.0%
!! TCACCGTTGTTGACTCCTTT+AGG - chr5_1:35121491-35121510 None:intergenic 45.0%
!! TGTCTGATTCGGTAAGAGAC+TGG + chr5_1:35122056-35122075 Msa0728840:intron 45.0%
!! AGAGACTGGTTTCGGAAGTT+TGG + chr5_1:35122070-35122089 Msa0728840:intron 45.0%
AAACAGCCACTGCTAACAGA+AGG - chr5_1:35122174-35122193 None:intergenic 45.0%
CACAACAGAAAGCCTGTAGA+AGG - chr5_1:35122210-35122229 None:intergenic 45.0%
GGCTTTCTGTTGTGTACTGT+AGG + chr5_1:35122216-35122235 Msa0728840:intron 45.0%
GATGCTAGGTTGTGTTTCGA+AGG + chr5_1:35122458-35122477 Msa0728840:intron 45.0%
ATAGTTTCTGCACATCTCGG+AGG + chr5_1:35123144-35123163 Msa0728840:intron 45.0%
! AGATAATTTGCAGCAGCAGC+AGG - chr5_1:35123317-35123336 None:intergenic 45.0%
TAACCCTCTCTCACGGTAGA+AGG - chr5_1:35117867-35117886 Msa0728830:five_prime_UTR 50.0%
CCGGCAATTACAAGTTCAGC+AGG + chr5_1:35117919-35117938 Msa0728840:intron 50.0%
ATGGACGAAGCTTCAGACGA+AGG + chr5_1:35119286-35119305 Msa0728840:CDS 50.0%
TTCGGAAGACCCAAGTTCTG+AGG + chr5_1:35119536-35119555 Msa0728840:CDS 50.0%
! TCGGAAGACCCAAGTTCTGA+GGG + chr5_1:35119537-35119556 Msa0728840:CDS 50.0%
CAAACGGTCCCTCAGAACTT+GGG - chr5_1:35119548-35119567 None:intergenic 50.0%
!! CAAGTTCTGAGGGACCGTTT+GGG + chr5_1:35119547-35119566 Msa0728840:CDS 50.0%
AGAGAACAGGGGATTGACCT+TGG + chr5_1:35119615-35119634 Msa0728840:CDS 50.0%
CCCAGAAATGATACCAGGTG+TGG + chr5_1:35119655-35119674 Msa0728840:CDS 50.0%
CATAACCACGAGCTGTTGGA+TGG + chr5_1:35119751-35119770 Msa0728840:CDS 50.0%
CGCGACTGCTATGAATGGTA+AGG + chr5_1:35120281-35120300 Msa0728840:CDS 50.0%
TGGGCGACTGCTCATATCAA+AGG + chr5_1:35120576-35120595 Msa0728840:CDS 50.0%
CAGGTATACGAACCACGTCT+CGG + chr5_1:35120610-35120629 Msa0728840:CDS 50.0%
TACTGGACCCTACTTGTGTG+AGG + chr5_1:35121363-35121382 Msa0728840:CDS 50.0%
TGTGTGAGGACTAAAGGGTG+TGG + chr5_1:35121377-35121396 Msa0728840:CDS 50.0%
AATCCAATTGCTACGCCTGG+TGG + chr5_1:35121404-35121423 Msa0728840:CDS 50.0%
TGGAGAAACTGTCAAGACGG+TGG + chr5_1:35121721-35121740 Msa0728840:intron 50.0%
!! GACTGGTTTCGGAAGTTTGG+AGG + chr5_1:35122073-35122092 Msa0728840:intron 50.0%
GAAGTTTGGAGGTTGACGCT+GGG + chr5_1:35122084-35122103 Msa0728840:intron 50.0%
AAGTTTGGAGGTTGACGCTG+GGG + chr5_1:35122085-35122104 Msa0728840:intron 50.0%
ATACGCAACAGCTGTAGTGG+TGG + chr5_1:35122320-35122339 Msa0728840:intron 50.0%
AGCTGTAGTGGTGGTCACAT+TGG + chr5_1:35122329-35122348 Msa0728840:intron 50.0%
GCTGTAGTGGTGGTCACATT+GGG + chr5_1:35122330-35122349 Msa0728840:intron 50.0%
CTGTAGTGGTGGTCACATTG+GGG + chr5_1:35122331-35122350 Msa0728840:intron 50.0%
TACGTGAGTCTGCACTGAGA+TGG + chr5_1:35123246-35123265 Msa0728840:CDS 50.0%
CCAAACGGTCCCTCAGAACT+TGG - chr5_1:35119549-35119568 None:intergenic 55.0%
!! CCAAGTTCTGAGGGACCGTT+TGG + chr5_1:35119546-35119565 Msa0728840:CDS 55.0%
ACAGGGGATTGACCTTGGAG+AGG + chr5_1:35119620-35119639 Msa0728840:CDS 55.0%
TGCGCATAACCACGAGCTGT+TGG + chr5_1:35119747-35119766 Msa0728840:CDS 55.0%
GCAAACCATCCAACAGCTCG+TGG - chr5_1:35119759-35119778 None:intergenic 55.0%
TAAACCCTCACACCGAGACG+TGG - chr5_1:35120625-35120644 None:intergenic 55.0%
TGTCGAAGGATGTGGCTGAG+AGG + chr5_1:35121204-35121223 Msa0728840:CDS 55.0%
GTCGAAGGATGTGGCTGAGA+GGG + chr5_1:35121205-35121224 Msa0728840:CDS 55.0%
CTTCCACCAGGCGTAGCAAT+TGG - chr5_1:35121410-35121429 None:intergenic 55.0%
TTGCTACGCCTGGTGGAAGT+AGG + chr5_1:35121411-35121430 Msa0728840:CDS 55.0%
ACTGTCAAGACGGTGGACAC+CGG + chr5_1:35121728-35121747 Msa0728840:intron 55.0%
GGAAGTTTGGAGGTTGACGC+TGG + chr5_1:35122083-35122102 Msa0728840:intron 55.0%
TATGCAGTGCGTGCTGTGTG+CGG + chr5_1:35122108-35122127 Msa0728840:intron 55.0%
GCTAACAGAAGGCAGACCTG+AGG - chr5_1:35122163-35122182 None:intergenic 55.0%
GGTCTGCCTTCTGTTAGCAG+TGG + chr5_1:35122165-35122184 Msa0728840:intron 55.0%
! AGGGAGCGTGTGACTCTGTA+AGG + chr5_1:35122781-35122800 Msa0728840:intron 55.0%
AGATGGACACCTCCGAGCAA+TGG - chr5_1:35123190-35123209 None:intergenic 55.0%
!! TTGCTCGGAGGTGTCCATCT+CGG + chr5_1:35123190-35123209 Msa0728840:CDS 55.0%
TGCTGATACGCTGCTGAACG+CGG + chr5_1:35123337-35123356 Msa0728840:CDS 55.0%
GCGCCTTCTACCGTGAGAGA+GGG + chr5_1:35117861-35117880 Msa0728840:CDS 60.0%
GGGGATTGACCTTGGAGAGG+CGG + chr5_1:35119623-35119642 Msa0728840:CDS 60.0%
TTCTCGCTTCCGCCTCTCCA+AGG - chr5_1:35119635-35119654 None:intergenic 60.0%
! ACGAACCACGTCTCGGTGTG+AGG + chr5_1:35120617-35120636 Msa0728840:CDS 60.0%
! CGAACCACGTCTCGGTGTGA+GGG + chr5_1:35120618-35120637 Msa0728840:CDS 60.0%
TGAGGACGCCTACTTCCACC+AGG - chr5_1:35121422-35121441 None:intergenic 60.0%
TCAAGACGGTGGACACCGGT+GGG + chr5_1:35121732-35121751 Msa0728840:intron 60.0%
! GGTGGACACCGGTGGGTTTA+TGG + chr5_1:35121739-35121758 Msa0728840:intron 60.0%
CAGCTGCTGTTCAGCCGAGA+TGG - chr5_1:35123207-35123226 None:intergenic 60.0%
GATACGCTGCTGAACGCGGT+TGG + chr5_1:35123341-35123360 Msa0728840:CDS 60.0%
GGCGCCTTCTACCGTGAGAG+AGG + chr5_1:35117860-35117879 Msa0728840:CDS 65.0%
GTCAAGACGGTGGACACCGG+TGG + chr5_1:35121731-35121750 Msa0728840:intron 65.0%
GCAGGCTGCTCTCTCTGTGC+AGG - chr5_1:35123299-35123318 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 35117858 35123406 35117858 ID=Msa0728840;Name=Msa0728840
chr5_1 mRNA 35117858 35123406 35117858 ID=Msa0728840-mRNA-1;Parent=Msa0728840;Name=Msa0728840-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.25|0.2|0.4|1|1|5|0|911
chr5_1 exon 35117858 35117899 35117858 ID=Msa0728840-mRNA-1:exon:10857;Parent=Msa0728840-mRNA-1
chr5_1 exon 35119077 35119142 35119077 ID=Msa0728840-mRNA-1:exon:10858;Parent=Msa0728840-mRNA-1
chr5_1 exon 35119226 35121579 35119226 ID=Msa0728840-mRNA-1:exon:10859;Parent=Msa0728840-mRNA-1
chr5_1 exon 35122217 35122268 35122217 ID=Msa0728840-mRNA-1:exon:10860;Parent=Msa0728840-mRNA-1
chr5_1 exon 35123185 35123406 35123185 ID=Msa0728840-mRNA-1:exon:10861;Parent=Msa0728840-mRNA-1
chr5_1 CDS 35117858 35117899 35117858 ID=Msa0728840-mRNA-1:cds;Parent=Msa0728840-mRNA-1
chr5_1 CDS 35119077 35119142 35119077 ID=Msa0728840-mRNA-1:cds;Parent=Msa0728840-mRNA-1
chr5_1 CDS 35119226 35121579 35119226 ID=Msa0728840-mRNA-1:cds;Parent=Msa0728840-mRNA-1
chr5_1 CDS 35122217 35122268 35122217 ID=Msa0728840-mRNA-1:cds;Parent=Msa0728840-mRNA-1
chr5_1 CDS 35123185 35123406 35123185 ID=Msa0728840-mRNA-1:cds;Parent=Msa0728840-mRNA-1
Gene Sequence

>Msa0728840

ATGGCGCCTTCTACCGTGAGAGAGGGTTACAAATCCCCTATGGGAGTAGAAGGGAGTGATCAGTCTCTAAATTCATCAGATATGAATGGATGCATGGATGATGAGGAAGTTATGGAGGAGGTAACAGAAAGTTCAGCTGACAGTAATGACAATATTAACATCGAGGAAATGGACGAAGCTTCAGACGAAGGAGATAATATGGATGACAATGGGGCTAATGAGTGTGATGGAGATTTAGAAGCGAGTAGCGATTCATCCGAGTCTAATGGGAATGCTATAGTCATAAATGGCATCGGTGATATTTTAAAGATGGACATGAAAAACATTTCTGTAGATGTAGTTGAAAGGTTTGACTTTGCTGATTTAGATGTTGCATATAATTTCTACTCATGGTATGCAAGGGTAAACGGATTTTCTGTTCGGAAGACCCAAGTTCTGAGGGACCGTTTGGGTAATGTTCTGCAGCAAACTTTTGTTTGTTCACGGGAAGGTTTTAGAGAGAACAGGGGATTGACCTTGGAGAGGCGGAAGCGAGAACCCAGAAATGATACCAGGTGTGGATGTTCTGCAAAATGTCGTGTCCACATAGACATTGTTTCAAAGCGTTGGTATGTGACCGTATTTGAATTTGCGCATAACCACGAGCTGTTGGATGGTTTGCTATGTGGTCTTTTACCGGCACATAGAAAGCTAACACCAACTGATTTGATTGAGATTGAAAAGTATAAGAATGTTGGTGTAAGACCATATCAAACGTATGGTGCAATGGCTAATTCATCAGGTGGTTTTCACAAGTTAGGTTTTGTGAAAAAGGATTTGTATAATCAATCAGGAAGACAAAGGAAATTAGTTTCATCTGACTCTTGCGGTGCACTGAAGTATCTTCATATGCTTCGTACAAAAGACCCTTTAATGTATGTTGCACATACTGTAGACAAAGATAAGAGGCTTGAACGTCTTTTTTGGTGTGATGGAGAAAGTCGTATGAATTATGAAATTTTTGGTGATGTATTGGCCTTTGATGCAACCTATAGGAAAAACAAATACAATTGCCCGTTTGTTATTTTCTCCGGTGTTAATCATCATAACCAAACTGTTGTCTTTGCGACAGGTTTAGTTACGAGAGAGACGGAAGAGACATATGTTTGGTTGTTGGACCAATTCGCGACTGCTATGAATGGTAAGGCTCCTTTATCTGTAATAACTGACGGTGATGTTGCAATGAAAAATGCCATAAAGAGTATATTTCCAAAAGCACATCATAGATTATGTGCTTGGCATCTTCTACGGAATGCATCATCGAATGTTGGGATTGCTGATTTCATGTCATATCTTAAAAGATGCATGTTGGGTGATATGGAGGTGAATAAGTTTGAAGAACTATGGGAAGAGATGGTTGAAAAATTTGGCCTGCAAGACAACAATTGGATCAATGAGATGTATGCAAAAAAAAGAATGTGGGCGACTGCTCATATCAAAGGAGAATTTTTTGCAGGTATACGAACCACGTCTCGGTGTGAGGGTTTACATAGTCACATAGGTCAATTTGTGCATTCGAGAATTAACTTGACTGATTTTGTCCAGCAATTTCATAGGTGCCTTACATATTTTCGATTTCGAGAGATTGAGTCCGACTATCATTCCAACTATGGTCAACCCGTATTGCAAACTAGTTTGCGATTCATTGAGAGATCAGCATCGAACCAGTTTACAAGGGAGATTTTCTTCCTTTTCCGTAATGCTCTGAAAAAATCTTTGATGTTGAGAATTATTGAAATTCAAGAGATGTCCATGGGTTCTATCTACAAAGTTTCAAAGTACTGTGGAAATGGAAGTGTCTGGCACGTTACACATTGTGAAACTCCTGTAGATTTCAAATGTTCGTGTCTTAGGATGGAGTCGTTTGGACTGCCTTGCGATCATATTATTGCTGTTTTGATGTATCTGGATTTTGATCACCTTCCCAAGAATCTAGTTTTACACAGGTGGACAAAGTTCGCTACAGATACAGTTCGAGCAAGATACACAAATGGTTCACAATATTGGGATTCTCAAATTGCTTCAAGGTATGCGGGAATTATTCAGTTGTCGAAGGATGTGGCTGAGAGGGTTTATCAAGATGTAGAAGAGTACAACCGCATTGTAGATTTTCTTAGTGCTGAACTTTTGAGGTTGAAGAATAAAACAACAACTGTTGGTATTGATGCTAGCACTGGGGTACACAATGTAGTCGTCGACGAAAGTTTACTGGACCCTACTTGTGTGAGGACTAAAGGGTGTGGAACTAATCCAATTGCTACGCCTGGTGGAAGTAGGCGTCCTCAATCATGTAGTCAGTGTGGTGTGATAGGACACAATAAACGATCATGTCCTAAAGGAGTCAACAACGGTGAAAATGCATGCACTTCGAGTGCGACGATTTATGAAATTAATGAAGATGATGAAGAAGGAGATCTTGAGCTGCTTTCTGTTGTGTACTGTAGGAGTTTTTTGTTGTTGTTAGTTGGGTTTCTGTTCCATTGCTCGGAGGTGTCCATCTCGGCTGAACAGCAGCTGCTGATCTGTAATGCTGTTGTACGTGAGTCTGCACTGAGATGGCAGACTGCTGTTGCTGTTGTGCGTGAGCCTGCACAGAGAGAGCAGCCTGCTGCTGCTGCAAATTATCTTGCTGATACGCTGCTGAACGCGGTTGGTTTGCTTCTTGCCAATCTTCAATCAAATGTCGAGCCGAGATGA
Protein sequence

>Msa0728840

MAPSTVREGYKSPMGVEGSDQSLNSSDMNGCMDDEEVMEEVTESSADSNDNINIEEMDEASDEGDNMDDNGANECDGDLEASSDSSESNGNAIVINGIGDILKMDMKNISVDVVERFDFADLDVAYNFYSWYARVNGFSVRKTQVLRDRLGNVLQQTFVCSREGFRENRGLTLERRKREPRNDTRCGCSAKCRVHIDIVSKRWYVTVFEFAHNHELLDGLLCGLLPAHRKLTPTDLIEIEKYKNVGVRPYQTYGAMANSSGGFHKLGFVKKDLYNQSGRQRKLVSSDSCGALKYLHMLRTKDPLMYVAHTVDKDKRLERLFWCDGESRMNYEIFGDVLAFDATYRKNKYNCPFVIFSGVNHHNQTVVFATGLVTRETEETYVWLLDQFATAMNGKAPLSVITDGDVAMKNAIKSIFPKAHHRLCAWHLLRNASSNVGIADFMSYLKRCMLGDMEVNKFEELWEEMVEKFGLQDNNWINEMYAKKRMWATAHIKGEFFAGIRTTSRCEGLHSHIGQFVHSRINLTDFVQQFHRCLTYFRFREIESDYHSNYGQPVLQTSLRFIERSASNQFTREIFFLFRNALKKSLMLRIIEIQEMSMGSIYKVSKYCGNGSVWHVTHCETPVDFKCSCLRMESFGLPCDHIIAVLMYLDFDHLPKNLVLHRWTKFATDTVRARYTNGSQYWDSQIASRYAGIIQLSKDVAERVYQDVEEYNRIVDFLSAELLRLKNKTTTVGIDASTGVHNVVVDESLLDPTCVRTKGCGTNPIATPGGSRRPQSCSQCGVIGHNKRSCPKGVNNGENACTSSATIYEINEDDEEGDLELLSVVYCRSFLLLLVGFLFHCSEVSISAEQQLLICNAVVRESALRWQTAVAVVREPAQREQPAAAANYLADTLLNAVGLLLANLQSNVEPR*