AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0210930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0210930 MtrunA17_Chr2g0328261 98.846 260 3 0 1 260 1 260 0.0 534
Msa0210930 MtrunA17_Chr5g0435311 86.694 248 33 0 13 260 61 308 1.66e-165 460
Msa0210930 MtrunA17_Chr4g0031621 87.209 258 33 0 3 260 1 258 3.05e-163 452
Msa0210930 MtrunA17_Chr7g0238681 81.783 258 47 0 3 260 1 258 2.79e-160 445
Msa0210930 MtrunA17_Chr3g0128801 68.217 258 77 3 1 258 1 253 3.15e-127 361
Msa0210930 MtrunA17_Chr3g0128791 67.451 255 79 2 6 258 1 253 1.51e-126 359
Msa0210930 MtrunA17_Chr5g0417701 72.926 229 60 1 31 259 22 248 2.83e-125 356
Msa0210930 MtrunA17_Chr4g0042521 69.444 252 67 4 6 255 1 244 9.84e-124 352
Msa0210930 MtrunA17_Chr5g0432611 67.600 250 76 3 11 258 5 251 4.09e-122 348
Msa0210930 MtrunA17_Chr3g0107291 66.275 255 80 2 4 258 12 260 2.79e-120 343
Msa0210930 MtrunA17_Chr3g0107311 66.537 257 82 3 3 258 1 254 9.28e-120 342
Msa0210930 MtrunA17_Chr3g0092071 71.111 225 63 1 34 258 25 247 4.48e-119 340
Msa0210930 MtrunA17_Chr7g0217661 63.563 247 80 2 12 258 4 240 3.49e-112 322
Msa0210930 MtrunA17_Chr1g0193631 66.079 227 73 3 33 256 29 254 1.27e-107 311
Msa0210930 MtrunA17_Chr7g0271001 59.289 253 95 4 4 253 1 248 5.23e-107 310
Msa0210930 MtrunA17_Chr4g0069711 59.031 227 90 2 32 257 59 283 5.72e-102 298
Msa0210930 MtrunA17_Chr6g0453341 61.265 253 87 3 6 258 11 252 2.98e-99 290
Msa0210930 MtrunA17_Chr1g0157061 64.220 218 75 2 41 256 22 238 3.44e-98 287
Msa0210930 MtrunA17_Chr7g0218751 53.725 255 110 2 1 255 1 247 4.91e-95 279
Msa0210930 MtrunA17_Chr8g0360041 57.658 222 92 1 34 255 31 250 6.06e-94 276
Msa0210930 MtrunA17_Chr7g0218741 56.696 224 94 2 34 256 29 250 2.45e-93 275
Msa0210930 MtrunA17_Chr4g0057091 51.383 253 120 3 9 259 11 262 3.94e-92 272
Msa0210930 MtrunA17_Chr5g0398271 50.602 249 121 2 9 256 12 259 5.46e-92 272
Msa0210930 MtrunA17_Chr7g0218761 60.294 204 79 1 53 256 8 209 6.83e-89 262
Msa0210930 MtrunA17_Chr5g0433841 55.111 225 100 1 34 258 41 264 3.06e-88 263
Msa0210930 MtrunA17_Chr8g0360721 59.701 201 79 1 53 253 17 215 4.26e-88 261
Msa0210930 MtrunA17_Chr4g0021561 46.825 252 131 1 7 258 8 256 1.08e-86 258
Msa0210930 MtrunA17_Chr3g0109801 53.617 235 100 5 33 259 52 285 2.06e-81 246
Msa0210930 MtrunA17_Chr4g0022841 61.207 116 45 0 140 255 1 116 7.99e-45 147
Msa0210930 MtrunA17_Chr4g0022851 53.968 126 51 2 6 131 7 125 5.90e-42 140
Msa0210930 MtrunA17_Chr2g0324191 37.342 158 93 1 1 158 1 152 1.02e-40 137
Msa0210930 MtrunA17_Chr2g0324181 57.426 101 43 0 158 258 17 117 1.17e-34 120
Msa0210930 MtrunA17_Chr2g0324221 28.030 264 163 10 5 256 7 255 1.31e-23 96.3
Msa0210930 MtrunA17_Chr4g0021641 30.638 235 137 11 34 256 41 261 5.02e-21 89.4
Msa0210930 MtrunA17_Chr2g0324201 27.863 262 160 11 10 256 6 253 1.14e-20 88.2
Msa0210930 MtrunA17_Chr8g0359981 48.837 86 35 4 76 158 2 81 3.96e-20 83.2
Msa0210930 MtrunA17_Chr8g0359971 46.250 80 42 1 179 257 1 80 1.14e-19 80.9
Msa0210930 MtrunA17_Chr4g0012801 29.661 236 131 11 34 253 42 258 1.70e-19 85.1
Msa0210930 MtrunA17_Chr7g0231221 29.870 231 132 12 39 253 53 269 2.89e-17 79.3
Msa0210930 MtrunA17_Chr7g0231211 27.966 236 136 12 34 253 47 264 1.04e-15 74.7
Msa0210930 MtrunA17_Chr1g0193571 55.932 59 25 1 203 260 4 62 1.16e-13 64.3
Msa0210930 MtrunA17_Chr4g0038741 26.667 225 130 9 45 253 32 237 1.85e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0210930 AT2G39700.1 83.137 255 42 1 7 260 3 257 2.68e-163 452
Msa0210930 AT2G28950.1 84.825 257 39 0 4 260 1 257 1.20e-159 443
Msa0210930 AT3G55500.1 76.923 260 60 0 1 260 1 260 3.96e-155 432
Msa0210930 AT2G37640.1 78.486 251 54 0 10 260 12 262 1.97e-151 423
Msa0210930 AT5G02260.1 75.194 258 64 0 3 260 1 258 4.22e-149 417
Msa0210930 AT2G37640.2 80.952 210 40 0 51 260 28 237 3.07e-130 368
Msa0210930 AT1G69530.2 67.729 251 78 2 9 259 3 250 1.62e-122 349
Msa0210930 AT1G69530.1 67.729 251 78 2 9 259 3 250 1.62e-122 349
Msa0210930 AT1G69530.3 67.331 251 79 2 9 259 3 250 3.33e-121 347
Msa0210930 AT5G56320.1 65.234 256 85 3 6 260 1 253 5.01e-120 343
Msa0210930 AT5G56320.2 65.234 256 85 3 6 260 1 253 5.01e-120 343
Msa0210930 AT2G03090.1 70.996 231 64 2 29 259 26 253 1.70e-119 342
Msa0210930 AT5G56320.3 65.234 256 85 3 6 260 1 253 2.92e-119 343
Msa0210930 AT5G05290.1 63.780 254 84 3 6 258 9 255 1.21e-118 340
Msa0210930 AT2G40610.1 69.565 230 67 2 30 258 26 253 1.01e-115 332
Msa0210930 AT1G26770.1 69.796 245 71 2 16 259 7 249 2.17e-114 328
Msa0210930 AT1G26770.2 69.796 245 71 2 16 259 17 259 2.90e-114 328
Msa0210930 AT3G29030.1 66.372 226 67 2 34 259 38 254 2.95e-107 311
Msa0210930 AT4G01630.1 62.097 248 85 5 9 253 8 249 4.93e-107 310
Msa0210930 AT1G69530.4 61.355 251 64 3 9 259 3 220 2.72e-106 307
Msa0210930 AT1G69530.5 60.956 251 65 3 9 259 3 220 3.78e-105 305
Msa0210930 AT1G20190.1 61.803 233 80 3 24 254 22 247 3.16e-99 290
Msa0210930 AT5G39290.1 50.542 277 110 4 3 256 4 276 1.16e-95 282
Msa0210930 AT5G39270.1 50.542 277 110 4 3 256 4 276 2.21e-95 281
Msa0210930 AT1G62980.1 52.941 255 117 3 3 256 1 253 3.43e-92 273
Msa0210930 AT5G39300.1 51.136 264 112 5 6 256 14 273 1.16e-90 270
Msa0210930 AT5G39280.1 56.250 224 94 2 33 256 53 272 1.64e-90 269
Msa0210930 AT1G12560.1 54.008 237 105 4 25 259 28 262 7.53e-89 264
Msa0210930 AT3G03220.1 53.744 227 104 1 34 260 40 265 6.37e-87 259
Msa0210930 AT5G39310.1 55.357 224 95 3 34 256 90 309 2.99e-85 257
Msa0210930 AT4G38210.1 45.968 248 132 1 14 259 8 255 1.50e-79 240
Msa0210930 AT1G20190.2 60.106 188 72 2 69 254 2 188 2.14e-78 235
Msa0210930 AT3G15370.1 47.638 254 117 7 7 256 6 247 2.15e-75 230
Msa0210930 AT5G39260.1 52.000 225 98 3 33 256 44 259 7.71e-75 229
Msa0210930 AT3G15370.2 42.756 283 116 8 8 256 7 277 9.63e-69 214
Msa0210930 AT4G28250.1 30.085 236 138 10 34 256 36 257 1.35e-22 94.0
Msa0210930 AT2G20750.1 29.958 237 140 10 34 256 40 264 1.19e-21 91.7
Msa0210930 AT1G65680.1 30.213 235 135 11 34 253 47 267 2.61e-20 87.8
Msa0210930 AT4G28250.2 28.936 235 136 10 34 256 36 251 7.55e-19 83.6
Msa0210930 AT2G20750.2 30.857 175 99 7 34 197 40 203 9.10e-15 71.6
Msa0210930 AT4G28250.4 31.073 177 93 8 34 200 36 193 1.38e-13 68.2
Msa0210930 AT4G28250.3 31.034 174 91 8 34 197 36 190 4.86e-13 66.6
Msa0210930 AT3G60570.1 23.723 274 180 8 1 260 1 259 5.11e-13 67.4
Msa0210930 AT3G45970.2 25.352 213 137 9 52 253 14 215 5.28e-13 67.0
Msa0210930 AT4G17030.1 25.100 251 165 9 13 253 6 243 3.16e-12 65.1

Find 86 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGTCGCACTTCCACTTCT+TGG 0.241176 2_1:-51349472 Msa0210930:CDS
GGAACATTGCTCCACATAAT+TGG 0.246045 2_1:-51349451 Msa0210930:CDS
GCTCCACATAATTGGCAATT+TGG 0.259736 2_1:-51349443 Msa0210930:CDS
TCACTAGGTTGAGCAAAATT+AGG 0.282502 2_1:+51350487 None:intergenic
TTGGCAATCAAATTCAGTTT+TGG 0.302765 2_1:-51349531 Msa0210930:CDS
GACAAGCAGTGGTGTCATTC+TGG 0.336967 2_1:-51350550 Msa0210930:CDS
TATGTTAAGGGCACTAAAAC+AGG 0.337612 2_1:-51349587 Msa0210930:CDS
GGATGCCAATGAGCAGAAAC+TGG 0.338905 2_1:-51349562 Msa0210930:CDS
GTTAGTTGCTGTGATGAAAA+TGG 0.339967 2_1:+51350519 None:intergenic
TTAGGAGGAGCATGTGGATA+TGG 0.344997 2_1:-51350679 Msa0210930:intron
GTCCTAATCAGCAACGTTGC+AGG 0.348958 2_1:-51349632 Msa0210930:CDS
GTGTCAAAGTGGATAATTAA+AGG 0.352597 2_1:-51349180 Msa0210930:three_prime_UTR
AGAAATGGGTATGGTGAGTA+TGG 0.353816 2_1:-51350977 Msa0210930:exon
GGAACAGAGAGAAAGAGATA+TGG 0.360476 2_1:+51351080 None:intergenic
GTAGGAAGCGTGGTGGGATT+AGG 0.372081 2_1:-51349688 Msa0210930:CDS
CACCTGCAACGTTGCTGATT+AGG 0.375478 2_1:+51349630 None:intergenic
GCTTTGTCCTTCAGAGTTAC+CGG 0.383935 2_1:-51349500 Msa0210930:CDS
CAATTTGGTCAAACTTTCAC+TGG 0.389947 2_1:-51349428 Msa0210930:CDS
ATCAGCAACGTTGCAGGTGC+AGG 0.391465 2_1:-51349626 Msa0210930:CDS
GGGATTAGGTTCACAATAAA+CGG 0.397891 2_1:-51349674 Msa0210930:CDS
AAAGGCGACAGGGACGATTC+CGG 0.402838 2_1:+51350384 None:intergenic
TACGGAGGTTCCGATGCTTC+CGG 0.415576 2_1:-51350850 Msa0210930:CDS
TATAGTGAGGACCTATGTTA+AGG 0.434796 2_1:-51349600 Msa0210930:CDS
AACTTGTATAGTCAAGGTTA+TGG 0.443205 2_1:-51350655 Msa0210930:CDS
TTTCGTGTTTGATTGATCAA+TGG 0.444722 2_1:-51349398 Msa0210930:exon
GAACAGAGAGAAAGAGATAT+GGG 0.447162 2_1:+51351081 None:intergenic
TCGTCCCTGTCGCCTTTCGC+CGG 0.466817 2_1:-51350378 Msa0210930:intron
TGACCAAATTGCCAATTATG+TGG 0.467767 2_1:+51349440 None:intergenic
ACAAACCGGCGAAAGGCGAC+AGG 0.470017 2_1:+51350373 None:intergenic
TCCGATGCTTCCGGCACCAT+GGG 0.492789 2_1:-51350841 Msa0210930:intron
TATAGAAATGTGTGTCAAAG+TGG 0.512839 2_1:-51349191 Msa0210930:three_prime_UTR
ATCCCACCACGCTTCCTACA+TGG 0.515202 2_1:+51349692 None:intergenic
ATAGTGAGGACCTATGTTAA+GGG 0.521329 2_1:-51349599 Msa0210930:CDS
GCACCACCATTGTAAACACC+TGG 0.523553 2_1:+51350898 None:intergenic
ACCCATGGTGCCGGAAGCAT+CGG 0.533485 2_1:+51350840 None:intergenic
TGGAGCAATGTTCCAAGAAG+TGG 0.536985 2_1:+51349460 None:intergenic
AGAGATATGGGTGGAACGAG+TGG 0.558962 2_1:+51351093 None:intergenic
GATGCCAATGAGCAGAAACT+GGG 0.559055 2_1:-51349561 Msa0210930:CDS
TCAGCAACGTTGCAGGTGCA+GGG 0.562393 2_1:-51349625 Msa0210930:CDS
TTACTTGCCACGTAGGTCAC+TGG 0.562722 2_1:-51349375 Msa0210930:three_prime_UTR
TTCCGATGCTTCCGGCACCA+TGG 0.566242 2_1:-51350842 Msa0210930:CDS
TTCAACAATGGACTAAGTTG+TGG 0.574416 2_1:-51350601 Msa0210930:CDS
GTAGGGTACAAACCGGCGAA+AGG 0.576269 2_1:+51350366 None:intergenic
ATGGTAAATGCTAGAATCCC+AGG 0.576542 2_1:-51350916 Msa0210930:CDS
GGAAGTGCGACGGTCACTAC+CGG 0.579926 2_1:+51349481 None:intergenic
CACCAACCACCATTGTCACT+AGG 0.581152 2_1:+51350472 None:intergenic
TATGGAAACTTGTATAGTCA+AGG 0.585100 2_1:-51350661 Msa0210930:CDS
GTCACTACCGGTAACTCTGA+AGG 0.588519 2_1:+51349493 None:intergenic
AAAGTGGATAATTAAAGGAG+TGG 0.590383 2_1:-51349175 Msa0210930:three_prime_UTR
ATCCCAGGTGTTTACAATGG+TGG 0.596482 2_1:-51350901 Msa0210930:CDS
ACTAGACGTACCCATGGTGC+CGG 0.607745 2_1:+51350831 None:intergenic
TTTGCTCAACCTAGTGACAA+TGG 0.609073 2_1:-51350481 Msa0210930:CDS
GCAAGATCAAAGTGAGGACG+AGG 0.609633 2_1:+51350442 None:intergenic
TCCAAGAAGTGGAAGTGCGA+CGG 0.611335 2_1:+51349471 None:intergenic
TATGTCACTAACAATGTGGA+TGG 0.613645 2_1:-51350935 Msa0210930:CDS
AACCTAGTGACAATGGTGGT+TGG 0.618881 2_1:-51350474 Msa0210930:CDS
CAGCAACGTTGCAGGTGCAG+GGG 0.618959 2_1:-51349624 Msa0210930:CDS
GATTATGCAGGGTGCCATGT+AGG 0.619428 2_1:-51349706 Msa0210930:intron
TGCCATGTAGGAAGCGTGGT+GGG 0.620597 2_1:-51349694 Msa0210930:CDS
TTAGGACTAAGTTAAAGTAA+CGG 0.623009 2_1:+51349648 None:intergenic
GTGTGTTTAGGAGGAGCATG+TGG 0.626776 2_1:-51350685 Msa0210930:intron
AGATCAAAGTGAGGACGAGG+AGG 0.633474 2_1:+51350445 None:intergenic
CTAGGTTGAGCAAAATTAGG+AGG 0.633552 2_1:+51350490 None:intergenic
CAAACCGGCGAAAGGCGACA+GGG 0.633653 2_1:+51350374 None:intergenic
CAGAGAGAAAGAGATATGGG+TGG 0.647807 2_1:+51351084 None:intergenic
CACCACCATTGTAAACACCT+GGG 0.648144 2_1:+51350899 None:intergenic
GTGTTTACAATGGTGGTGCA+TGG 0.652108 2_1:-51350894 Msa0210930:CDS
AGCACAGCACTATTCAACAA+TGG 0.654867 2_1:-51350613 Msa0210930:CDS
GTGCCATGTAGGAAGCGTGG+TGG 0.655283 2_1:-51349695 Msa0210930:CDS
AGAATCCCAGGTGTTTACAA+TGG 0.660050 2_1:-51350904 Msa0210930:CDS
GTTGCTGTGATGAAAATGGA+AGG 0.660102 2_1:+51350523 None:intergenic
AAAATCGCTGAATATCGCGC+CGG 0.661509 2_1:-51350403 Msa0210930:CDS
ATGTTAAGGGCACTAAAACA+GGG 0.661896 2_1:-51349586 Msa0210930:CDS
TCAATGGTTACTTGCCACGT+AGG 0.663827 2_1:-51349382 Msa0210930:three_prime_UTR
TTATTATGTCACTAACAATG+TGG 0.670910 2_1:-51350939 Msa0210930:CDS
CAGGTGCAGGGGATATAGTG+AGG 0.673660 2_1:-51349613 Msa0210930:CDS
ATGCCAATGAGCAGAAACTG+GGG 0.677827 2_1:-51349560 Msa0210930:CDS
GATCAAAGTGAGGACGAGGA+GGG 0.681799 2_1:+51350446 None:intergenic
AGGGTGCCATGTAGGAAGCG+TGG 0.699181 2_1:-51349698 Msa0210930:CDS
TGCCAATGAGCAGAAACTGG+GGG 0.704067 2_1:-51349559 Msa0210930:CDS
TTGCTGTGATGAAAATGGAA+GGG 0.708603 2_1:+51350524 None:intergenic
GGCATGGCAAGATCAAAGTG+AGG 0.710022 2_1:+51350436 None:intergenic
GCTCAACCTAGTGACAATGG+TGG 0.714318 2_1:-51350478 Msa0210930:CDS
AGTGTGCAAATGACAAGCAG+TGG 0.728732 2_1:-51350561 Msa0210930:CDS
TTAAGGGCACTAAAACAGGG+TGG 0.761599 2_1:-51349583 Msa0210930:CDS
ACTTTGACCAGTGACCTACG+TGG 0.826698 2_1:+51349368 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGATTTAGTTTAAAAAAAT+TGG + chr2_1:51349251-51349270 None:intergenic 10.0%
!!! TAGATTTAGTTTAAAAAAAT+TGG + chr2_1:51349251-51349270 None:intergenic 10.0%
!!! AATAAGAAGTATATAGATAA+TGG - chr2_1:51350117-51350136 Msa0210930:intron 15.0%
!!! ATAAGAAGTATATAGATAAT+GGG - chr2_1:51350118-51350137 Msa0210930:intron 15.0%
!!! ATATATAAGCACTTTTATTA+GGG + chr2_1:51350225-51350244 None:intergenic 15.0%
!!! TATATATAAGCACTTTTATT+AGG + chr2_1:51350226-51350245 None:intergenic 15.0%
!! AAACTTAAAATAGTTTATGA+AGG - chr2_1:51350339-51350358 Msa0210930:intron 15.0%
!!! AATAAGAAGTATATAGATAA+TGG - chr2_1:51350117-51350136 Msa0210930:intron 15.0%
!!! ATAAGAAGTATATAGATAAT+GGG - chr2_1:51350118-51350137 Msa0210930:intron 15.0%
!!! ATATATAAGCACTTTTATTA+GGG + chr2_1:51350225-51350244 None:intergenic 15.0%
!!! TATATATAAGCACTTTTATT+AGG + chr2_1:51350226-51350245 None:intergenic 15.0%
!! AAACTTAAAATAGTTTATGA+AGG - chr2_1:51350339-51350358 Msa0210930:intron 15.0%
!! AGAAGAAAAAAAAACAGAAA+TGG - chr2_1:51349274-51349293 Msa0210930:three_prime_UTR 20.0%
!! GAAGAAAAAAAAACAGAAAT+GGG - chr2_1:51349275-51349294 Msa0210930:three_prime_UTR 20.0%
!!! TGCTCTATTAAAATTGATTT+TGG - chr2_1:51349936-51349955 Msa0210930:intron 20.0%
!! TAAATGACTTGAATGTTAAA+TGG - chr2_1:51350051-51350070 Msa0210930:intron 20.0%
!! ATTAGTTATTTATTCCAACA+TGG + chr2_1:51350161-51350180 None:intergenic 20.0%
!! AGAAGAAAAAAAAACAGAAA+TGG - chr2_1:51349274-51349293 Msa0210930:three_prime_UTR 20.0%
!! GAAGAAAAAAAAACAGAAAT+GGG - chr2_1:51349275-51349294 Msa0210930:three_prime_UTR 20.0%
!!! TGCTCTATTAAAATTGATTT+TGG - chr2_1:51349936-51349955 Msa0210930:intron 20.0%
!! TAAATGACTTGAATGTTAAA+TGG - chr2_1:51350051-51350070 Msa0210930:intron 20.0%
!! ATTAGTTATTTATTCCAACA+TGG + chr2_1:51350161-51350180 None:intergenic 20.0%
! TTAAAAAAATTGGACAGTTG+AGG + chr2_1:51349241-51349260 None:intergenic 25.0%
! AAAAAAAACAGAAATGGGTA+TGG - chr2_1:51349280-51349299 Msa0210930:three_prime_UTR 25.0%
! TTATTATGTCACTAACAATG+TGG - chr2_1:51349327-51349346 Msa0210930:three_prime_UTR 25.0%
! AGCAAATAAGCAAAAATGTA+GGG + chr2_1:51349920-51349939 None:intergenic 25.0%
!!! TAGATAATGGGAGAATAAAT+TGG - chr2_1:51350130-51350149 Msa0210930:intron 25.0%
! GAAAACATCTTATGACTTAT+AGG + chr2_1:51350290-51350309 None:intergenic 25.0%
!!! TTTTCTTAACTTCTTTGAAG+TGG + chr2_1:51350318-51350337 None:intergenic 25.0%
!! GGATTGACATAATTTTTGTT+TGG + chr2_1:51350428-51350447 None:intergenic 25.0%
!! AAGTAAATAAGCCTTATCTA+AGG + chr2_1:51350458-51350477 None:intergenic 25.0%
!!! TTTTGTTATGTTGATTATGC+AGG - chr2_1:51350548-51350567 Msa0210930:CDS 25.0%
!! TTTGTTATGTTGATTATGCA+GGG - chr2_1:51350549-51350568 Msa0210930:CDS 25.0%
! TTAGGACTAAGTTAAAGTAA+CGG + chr2_1:51350621-51350640 None:intergenic 25.0%
! TTAAAAAAATTGGACAGTTG+AGG + chr2_1:51349241-51349260 None:intergenic 25.0%
! AAAAAAAACAGAAATGGGTA+TGG - chr2_1:51349280-51349299 Msa0210930:three_prime_UTR 25.0%
! TTATTATGTCACTAACAATG+TGG - chr2_1:51349327-51349346 Msa0210930:three_prime_UTR 25.0%
! AGCAAATAAGCAAAAATGTA+GGG + chr2_1:51349920-51349939 None:intergenic 25.0%
!!! TAGATAATGGGAGAATAAAT+TGG - chr2_1:51350130-51350149 Msa0210930:intron 25.0%
! GAAAACATCTTATGACTTAT+AGG + chr2_1:51350290-51350309 None:intergenic 25.0%
!!! TTTTCTTAACTTCTTTGAAG+TGG + chr2_1:51350318-51350337 None:intergenic 25.0%
!! GGATTGACATAATTTTTGTT+TGG + chr2_1:51350428-51350447 None:intergenic 25.0%
!! AAGTAAATAAGCCTTATCTA+AGG + chr2_1:51350458-51350477 None:intergenic 25.0%
!!! TTTTGTTATGTTGATTATGC+AGG - chr2_1:51350548-51350567 Msa0210930:CDS 25.0%
!! TTTGTTATGTTGATTATGCA+GGG - chr2_1:51350549-51350568 Msa0210930:CDS 25.0%
! TTAGGACTAAGTTAAAGTAA+CGG + chr2_1:51350621-51350640 None:intergenic 25.0%
AGAAAATAGAGAAAAAGCAG+AGG + chr2_1:51349215-51349234 None:intergenic 30.0%
!!! TTTGCCTTTTTTGTGTGTTT+AGG - chr2_1:51349569-51349588 Msa0210930:CDS 30.0%
TATGGAAACTTGTATAGTCA+AGG - chr2_1:51349605-51349624 Msa0210930:CDS 30.0%
AACTTGTATAGTCAAGGTTA+TGG - chr2_1:51349611-51349630 Msa0210930:CDS 30.0%
GAGCAAATAAGCAAAAATGT+AGG + chr2_1:51349921-51349940 None:intergenic 30.0%
AAACAAACACTTGATGTCAT+CGG + chr2_1:51349970-51349989 None:intergenic 30.0%
!! CAAGTGTTTGTTTGATTTTG+TGG - chr2_1:51349977-51349996 Msa0210930:intron 30.0%
TGTGATAGATCTCAATGATA+AGG - chr2_1:51350078-51350097 Msa0210930:intron 30.0%
ATAAATTGGTAAGACCATGT+TGG - chr2_1:51350144-51350163 Msa0210930:intron 30.0%
! TTGGCAATCAAATTCAGTTT+TGG - chr2_1:51350735-51350754 Msa0210930:intron 30.0%
!! CAATCAAATTCAGTTTTGGT+GGG - chr2_1:51350739-51350758 Msa0210930:intron 30.0%
TTTCGTGTTTGATTGATCAA+TGG - chr2_1:51350868-51350887 Msa0210930:CDS 30.0%
! TTTTCCACCAATTGTGTTTT+TGG - chr2_1:51350991-51351010 Msa0210930:exon 30.0%
TCAAAAAGAACACCAATCTA+TGG + chr2_1:51351029-51351048 None:intergenic 30.0%
TATAGAAATGTGTGTCAAAG+TGG - chr2_1:51351075-51351094 Msa0210930:five_prime_UTR 30.0%
GTGTCAAAGTGGATAATTAA+AGG - chr2_1:51351086-51351105 Msa0210930:five_prime_UTR 30.0%
AAAGTGGATAATTAAAGGAG+TGG - chr2_1:51351091-51351110 Msa0210930:five_prime_UTR 30.0%
AGAAAATAGAGAAAAAGCAG+AGG + chr2_1:51349215-51349234 None:intergenic 30.0%
!!! TTTGCCTTTTTTGTGTGTTT+AGG - chr2_1:51349569-51349588 Msa0210930:CDS 30.0%
TATGGAAACTTGTATAGTCA+AGG - chr2_1:51349605-51349624 Msa0210930:CDS 30.0%
AACTTGTATAGTCAAGGTTA+TGG - chr2_1:51349611-51349630 Msa0210930:CDS 30.0%
GAGCAAATAAGCAAAAATGT+AGG + chr2_1:51349921-51349940 None:intergenic 30.0%
AAACAAACACTTGATGTCAT+CGG + chr2_1:51349970-51349989 None:intergenic 30.0%
!! CAAGTGTTTGTTTGATTTTG+TGG - chr2_1:51349977-51349996 Msa0210930:intron 30.0%
TGTGATAGATCTCAATGATA+AGG - chr2_1:51350078-51350097 Msa0210930:intron 30.0%
ATAAATTGGTAAGACCATGT+TGG - chr2_1:51350144-51350163 Msa0210930:intron 30.0%
! TTGGCAATCAAATTCAGTTT+TGG - chr2_1:51350735-51350754 Msa0210930:intron 30.0%
!! CAATCAAATTCAGTTTTGGT+GGG - chr2_1:51350739-51350758 Msa0210930:intron 30.0%
TTTCGTGTTTGATTGATCAA+TGG - chr2_1:51350868-51350887 Msa0210930:CDS 30.0%
! TTTTCCACCAATTGTGTTTT+TGG - chr2_1:51350991-51351010 Msa0210930:exon 30.0%
TCAAAAAGAACACCAATCTA+TGG + chr2_1:51351029-51351048 None:intergenic 30.0%
TATAGAAATGTGTGTCAAAG+TGG - chr2_1:51351075-51351094 Msa0210930:five_prime_UTR 30.0%
GTGTCAAAGTGGATAATTAA+AGG - chr2_1:51351086-51351105 Msa0210930:five_prime_UTR 30.0%
AAAGTGGATAATTAAAGGAG+TGG - chr2_1:51351091-51351110 Msa0210930:five_prime_UTR 30.0%
GAACAGAGAGAAAGAGATAT+GGG + chr2_1:51349188-51349207 None:intergenic 35.0%
ATAGAGAAAAAGCAGAGGTA+TGG + chr2_1:51349210-51349229 None:intergenic 35.0%
TATGTCACTAACAATGTGGA+TGG - chr2_1:51349331-51349350 Msa0210930:three_prime_UTR 35.0%
TCCTCCTAAACACACAAAAA+AGG + chr2_1:51349576-51349595 None:intergenic 35.0%
!! TTCAACAATGGACTAAGTTG+TGG - chr2_1:51349665-51349684 Msa0210930:CDS 35.0%
TTGCTGTGATGAAAATGGAA+GGG + chr2_1:51349745-51349764 None:intergenic 35.0%
GTTAGTTGCTGTGATGAAAA+TGG + chr2_1:51349750-51349769 None:intergenic 35.0%
! TCACTAGGTTGAGCAAAATT+AGG + chr2_1:51349782-51349801 None:intergenic 35.0%
!! GATTTTAAGGAACATAGGCA+TGG + chr2_1:51349849-51349868 None:intergenic 35.0%
!! TCAGCGATTTTAAGGAACAT+AGG + chr2_1:51349854-51349873 None:intergenic 35.0%
CAAAAATGTAGGGTACAAAC+CGG + chr2_1:51349910-51349929 None:intergenic 35.0%
ATCCAAACATGCCTTAGATA+AGG - chr2_1:51350444-51350463 Msa0210930:CDS 35.0%
GGGATTAGGTTCACAATAAA+CGG - chr2_1:51350592-51350611 Msa0210930:CDS 35.0%
TATAGTGAGGACCTATGTTA+AGG - chr2_1:51350666-51350685 Msa0210930:CDS 35.0%
ATAGTGAGGACCTATGTTAA+GGG - chr2_1:51350667-51350686 Msa0210930:CDS 35.0%
!!! TGTTTTAGTGCCCTTAACAT+AGG + chr2_1:51350680-51350699 None:intergenic 35.0%
!! TATGTTAAGGGCACTAAAAC+AGG - chr2_1:51350679-51350698 Msa0210930:intron 35.0%
!! ATGTTAAGGGCACTAAAACA+GGG - chr2_1:51350680-51350699 Msa0210930:intron 35.0%
!! GCAATCAAATTCAGTTTTGG+TGG - chr2_1:51350738-51350757 Msa0210930:intron 35.0%
TGACCAAATTGCCAATTATG+TGG + chr2_1:51350829-51350848 None:intergenic 35.0%
CAATTTGGTCAAACTTTCAC+TGG - chr2_1:51350838-51350857 Msa0210930:intron 35.0%
!! GATTGGTGTTCTTTTTGACT+AGG - chr2_1:51351031-51351050 Msa0210930:five_prime_UTR 35.0%
GAACAGAGAGAAAGAGATAT+GGG + chr2_1:51349188-51349207 None:intergenic 35.0%
ATAGAGAAAAAGCAGAGGTA+TGG + chr2_1:51349210-51349229 None:intergenic 35.0%
TATGTCACTAACAATGTGGA+TGG - chr2_1:51349331-51349350 Msa0210930:three_prime_UTR 35.0%
TCCTCCTAAACACACAAAAA+AGG + chr2_1:51349576-51349595 None:intergenic 35.0%
!! TTCAACAATGGACTAAGTTG+TGG - chr2_1:51349665-51349684 Msa0210930:CDS 35.0%
TTGCTGTGATGAAAATGGAA+GGG + chr2_1:51349745-51349764 None:intergenic 35.0%
GTTAGTTGCTGTGATGAAAA+TGG + chr2_1:51349750-51349769 None:intergenic 35.0%
! TCACTAGGTTGAGCAAAATT+AGG + chr2_1:51349782-51349801 None:intergenic 35.0%
!! GATTTTAAGGAACATAGGCA+TGG + chr2_1:51349849-51349868 None:intergenic 35.0%
!! TCAGCGATTTTAAGGAACAT+AGG + chr2_1:51349854-51349873 None:intergenic 35.0%
CAAAAATGTAGGGTACAAAC+CGG + chr2_1:51349910-51349929 None:intergenic 35.0%
ATCCAAACATGCCTTAGATA+AGG - chr2_1:51350444-51350463 Msa0210930:CDS 35.0%
GGGATTAGGTTCACAATAAA+CGG - chr2_1:51350592-51350611 Msa0210930:CDS 35.0%
TATAGTGAGGACCTATGTTA+AGG - chr2_1:51350666-51350685 Msa0210930:CDS 35.0%
ATAGTGAGGACCTATGTTAA+GGG - chr2_1:51350667-51350686 Msa0210930:CDS 35.0%
!!! TGTTTTAGTGCCCTTAACAT+AGG + chr2_1:51350680-51350699 None:intergenic 35.0%
!! TATGTTAAGGGCACTAAAAC+AGG - chr2_1:51350679-51350698 Msa0210930:intron 35.0%
!! ATGTTAAGGGCACTAAAACA+GGG - chr2_1:51350680-51350699 Msa0210930:intron 35.0%
!! GCAATCAAATTCAGTTTTGG+TGG - chr2_1:51350738-51350757 Msa0210930:intron 35.0%
TGACCAAATTGCCAATTATG+TGG + chr2_1:51350829-51350848 None:intergenic 35.0%
CAATTTGGTCAAACTTTCAC+TGG - chr2_1:51350838-51350857 Msa0210930:intron 35.0%
!! GATTGGTGTTCTTTTTGACT+AGG - chr2_1:51351031-51351050 Msa0210930:five_prime_UTR 35.0%
GGAACAGAGAGAAAGAGATA+TGG + chr2_1:51349189-51349208 None:intergenic 40.0%
AGAAATGGGTATGGTGAGTA+TGG - chr2_1:51349289-51349308 Msa0210930:three_prime_UTR 40.0%
ATGGTAAATGCTAGAATCCC+AGG - chr2_1:51349350-51349369 Msa0210930:three_prime_UTR 40.0%
AGAATCCCAGGTGTTTACAA+TGG - chr2_1:51349362-51349381 Msa0210930:three_prime_UTR 40.0%
!!! ACAGCTCATGCCACTTTTTA+CGG - chr2_1:51349398-51349417 Msa0210930:exon 40.0%
TTTAGTACTAGACGTACCCA+TGG + chr2_1:51349444-51349463 None:intergenic 40.0%
!!! GCCTTTTTTGTGTGTTTAGG+AGG - chr2_1:51349572-51349591 Msa0210930:CDS 40.0%
AGCACAGCACTATTCAACAA+TGG - chr2_1:51349653-51349672 Msa0210930:CDS 40.0%
GTTGCTGTGATGAAAATGGA+AGG + chr2_1:51349746-51349765 None:intergenic 40.0%
! CTAGGTTGAGCAAAATTAGG+AGG + chr2_1:51349779-51349798 None:intergenic 40.0%
TTTGCTCAACCTAGTGACAA+TGG - chr2_1:51349785-51349804 Msa0210930:intron 40.0%
! CGCGATATTCAGCGATTTTA+AGG + chr2_1:51349862-51349881 None:intergenic 40.0%
! AGCCTTATCTAAGGCATGTT+TGG + chr2_1:51350449-51350468 None:intergenic 40.0%
GGAACATTGCTCCACATAAT+TGG - chr2_1:51350815-51350834 Msa0210930:intron 40.0%
GCTCCACATAATTGGCAATT+TGG - chr2_1:51350823-51350842 Msa0210930:intron 40.0%
! CGCGCAATTTTACCATAGAT+TGG - chr2_1:51351014-51351033 Msa0210930:five_prime_UTR 40.0%
GGAACAGAGAGAAAGAGATA+TGG + chr2_1:51349189-51349208 None:intergenic 40.0%
AGAAATGGGTATGGTGAGTA+TGG - chr2_1:51349289-51349308 Msa0210930:three_prime_UTR 40.0%
ATGGTAAATGCTAGAATCCC+AGG - chr2_1:51349350-51349369 Msa0210930:three_prime_UTR 40.0%
AGAATCCCAGGTGTTTACAA+TGG - chr2_1:51349362-51349381 Msa0210930:three_prime_UTR 40.0%
!!! ACAGCTCATGCCACTTTTTA+CGG - chr2_1:51349398-51349417 Msa0210930:exon 40.0%
TTTAGTACTAGACGTACCCA+TGG + chr2_1:51349444-51349463 None:intergenic 40.0%
!!! GCCTTTTTTGTGTGTTTAGG+AGG - chr2_1:51349572-51349591 Msa0210930:CDS 40.0%
AGCACAGCACTATTCAACAA+TGG - chr2_1:51349653-51349672 Msa0210930:CDS 40.0%
GTTGCTGTGATGAAAATGGA+AGG + chr2_1:51349746-51349765 None:intergenic 40.0%
! CTAGGTTGAGCAAAATTAGG+AGG + chr2_1:51349779-51349798 None:intergenic 40.0%
TTTGCTCAACCTAGTGACAA+TGG - chr2_1:51349785-51349804 Msa0210930:intron 40.0%
! CGCGATATTCAGCGATTTTA+AGG + chr2_1:51349862-51349881 None:intergenic 40.0%
! AGCCTTATCTAAGGCATGTT+TGG + chr2_1:51350449-51350468 None:intergenic 40.0%
GGAACATTGCTCCACATAAT+TGG - chr2_1:51350815-51350834 Msa0210930:intron 40.0%
GCTCCACATAATTGGCAATT+TGG - chr2_1:51350823-51350842 Msa0210930:intron 40.0%
! CGCGCAATTTTACCATAGAT+TGG - chr2_1:51351014-51351033 Msa0210930:five_prime_UTR 40.0%
CAGAGAGAAAGAGATATGGG+TGG + chr2_1:51349185-51349204 None:intergenic 45.0%
ATCCCAGGTGTTTACAATGG+TGG - chr2_1:51349365-51349384 Msa0210930:three_prime_UTR 45.0%
CACCACCATTGTAAACACCT+GGG + chr2_1:51349370-51349389 None:intergenic 45.0%
! GTGTTTACAATGGTGGTGCA+TGG - chr2_1:51349372-51349391 Msa0210930:three_prime_UTR 45.0%
ATCGGAACCTCCGTAAAAAG+TGG + chr2_1:51349411-51349430 None:intergenic 45.0%
! TTAGGAGGAGCATGTGGATA+TGG - chr2_1:51349587-51349606 Msa0210930:CDS 45.0%
AGTGTGCAAATGACAAGCAG+TGG - chr2_1:51349705-51349724 Msa0210930:intron 45.0%
AACCTAGTGACAATGGTGGT+TGG - chr2_1:51349792-51349811 Msa0210930:intron 45.0%
AAAATCGCTGAATATCGCGC+CGG - chr2_1:51349863-51349882 Msa0210930:intron 45.0%
!! TTAAGGGCACTAAAACAGGG+TGG - chr2_1:51350683-51350702 Msa0210930:intron 45.0%
GATGCCAATGAGCAGAAACT+GGG - chr2_1:51350705-51350724 Msa0210930:intron 45.0%
ATGCCAATGAGCAGAAACTG+GGG - chr2_1:51350706-51350725 Msa0210930:intron 45.0%
GCTTTGTCCTTCAGAGTTAC+CGG - chr2_1:51350766-51350785 Msa0210930:intron 45.0%
TGGAGCAATGTTCCAAGAAG+TGG + chr2_1:51350809-51350828 None:intergenic 45.0%
TCAATGGTTACTTGCCACGT+AGG - chr2_1:51350884-51350903 Msa0210930:CDS 45.0%
TTGCGCGCCAAAAACACAAT+TGG + chr2_1:51351001-51351020 None:intergenic 45.0%
CAGAGAGAAAGAGATATGGG+TGG + chr2_1:51349185-51349204 None:intergenic 45.0%
ATCCCAGGTGTTTACAATGG+TGG - chr2_1:51349365-51349384 Msa0210930:three_prime_UTR 45.0%
CACCACCATTGTAAACACCT+GGG + chr2_1:51349370-51349389 None:intergenic 45.0%
! GTGTTTACAATGGTGGTGCA+TGG - chr2_1:51349372-51349391 Msa0210930:three_prime_UTR 45.0%
ATCGGAACCTCCGTAAAAAG+TGG + chr2_1:51349411-51349430 None:intergenic 45.0%
! TTAGGAGGAGCATGTGGATA+TGG - chr2_1:51349587-51349606 Msa0210930:CDS 45.0%
AGTGTGCAAATGACAAGCAG+TGG - chr2_1:51349705-51349724 Msa0210930:intron 45.0%
AACCTAGTGACAATGGTGGT+TGG - chr2_1:51349792-51349811 Msa0210930:intron 45.0%
AAAATCGCTGAATATCGCGC+CGG - chr2_1:51349863-51349882 Msa0210930:intron 45.0%
!! TTAAGGGCACTAAAACAGGG+TGG - chr2_1:51350683-51350702 Msa0210930:intron 45.0%
GATGCCAATGAGCAGAAACT+GGG - chr2_1:51350705-51350724 Msa0210930:intron 45.0%
ATGCCAATGAGCAGAAACTG+GGG - chr2_1:51350706-51350725 Msa0210930:intron 45.0%
GCTTTGTCCTTCAGAGTTAC+CGG - chr2_1:51350766-51350785 Msa0210930:intron 45.0%
TGGAGCAATGTTCCAAGAAG+TGG + chr2_1:51350809-51350828 None:intergenic 45.0%
TCAATGGTTACTTGCCACGT+AGG - chr2_1:51350884-51350903 Msa0210930:CDS 45.0%
TTGCGCGCCAAAAACACAAT+TGG + chr2_1:51351001-51351020 None:intergenic 45.0%
AGAGATATGGGTGGAACGAG+TGG + chr2_1:51349176-51349195 None:intergenic 50.0%
GCACCACCATTGTAAACACC+TGG + chr2_1:51349371-51349390 None:intergenic 50.0%
!!! GCTCATGCCACTTTTTACGG+AGG - chr2_1:51349401-51349420 Msa0210930:exon 50.0%
! GTGTGTTTAGGAGGAGCATG+TGG - chr2_1:51349581-51349600 Msa0210930:CDS 50.0%
!! GACAAGCAGTGGTGTCATTC+TGG - chr2_1:51349716-51349735 Msa0210930:intron 50.0%
GCTCAACCTAGTGACAATGG+TGG - chr2_1:51349788-51349807 Msa0210930:intron 50.0%
CACCAACCACCATTGTCACT+AGG + chr2_1:51349797-51349816 None:intergenic 50.0%
GATCAAAGTGAGGACGAGGA+GGG + chr2_1:51349823-51349842 None:intergenic 50.0%
AGATCAAAGTGAGGACGAGG+AGG + chr2_1:51349824-51349843 None:intergenic 50.0%
GCAAGATCAAAGTGAGGACG+AGG + chr2_1:51349827-51349846 None:intergenic 50.0%
GGCATGGCAAGATCAAAGTG+AGG + chr2_1:51349833-51349852 None:intergenic 50.0%
! GATTATGCAGGGTGCCATGT+AGG - chr2_1:51350560-51350579 Msa0210930:CDS 50.0%
GTCCTAATCAGCAACGTTGC+AGG - chr2_1:51350634-51350653 Msa0210930:CDS 50.0%
! CACCTGCAACGTTGCTGATT+AGG + chr2_1:51350639-51350658 None:intergenic 50.0%
GGATGCCAATGAGCAGAAAC+TGG - chr2_1:51350704-51350723 Msa0210930:intron 50.0%
TGCCAATGAGCAGAAACTGG+GGG - chr2_1:51350707-51350726 Msa0210930:intron 50.0%
GCAGAAACTGGGGGCAAAAT+TGG - chr2_1:51350716-51350735 Msa0210930:intron 50.0%
GTCACTACCGGTAACTCTGA+AGG + chr2_1:51350776-51350795 None:intergenic 50.0%
! TCCAAGAAGTGGAAGTGCGA+CGG + chr2_1:51350798-51350817 None:intergenic 50.0%
TTACTTGCCACGTAGGTCAC+TGG - chr2_1:51350891-51350910 Msa0210930:CDS 50.0%
ACTTTGACCAGTGACCTACG+TGG + chr2_1:51350901-51350920 None:intergenic 50.0%
CGCGCCAAAAACACAATTGG+TGG + chr2_1:51350998-51351017 None:intergenic 50.0%
AGAGATATGGGTGGAACGAG+TGG + chr2_1:51349176-51349195 None:intergenic 50.0%
GCACCACCATTGTAAACACC+TGG + chr2_1:51349371-51349390 None:intergenic 50.0%
!!! GCTCATGCCACTTTTTACGG+AGG - chr2_1:51349401-51349420 Msa0210930:exon 50.0%
! GTGTGTTTAGGAGGAGCATG+TGG - chr2_1:51349581-51349600 Msa0210930:CDS 50.0%
!! GACAAGCAGTGGTGTCATTC+TGG - chr2_1:51349716-51349735 Msa0210930:intron 50.0%
GCTCAACCTAGTGACAATGG+TGG - chr2_1:51349788-51349807 Msa0210930:intron 50.0%
CACCAACCACCATTGTCACT+AGG + chr2_1:51349797-51349816 None:intergenic 50.0%
GATCAAAGTGAGGACGAGGA+GGG + chr2_1:51349823-51349842 None:intergenic 50.0%
AGATCAAAGTGAGGACGAGG+AGG + chr2_1:51349824-51349843 None:intergenic 50.0%
GCAAGATCAAAGTGAGGACG+AGG + chr2_1:51349827-51349846 None:intergenic 50.0%
GGCATGGCAAGATCAAAGTG+AGG + chr2_1:51349833-51349852 None:intergenic 50.0%
! GATTATGCAGGGTGCCATGT+AGG - chr2_1:51350560-51350579 Msa0210930:CDS 50.0%
GTCCTAATCAGCAACGTTGC+AGG - chr2_1:51350634-51350653 Msa0210930:CDS 50.0%
! CACCTGCAACGTTGCTGATT+AGG + chr2_1:51350639-51350658 None:intergenic 50.0%
GGATGCCAATGAGCAGAAAC+TGG - chr2_1:51350704-51350723 Msa0210930:intron 50.0%
TGCCAATGAGCAGAAACTGG+GGG - chr2_1:51350707-51350726 Msa0210930:intron 50.0%
GCAGAAACTGGGGGCAAAAT+TGG - chr2_1:51350716-51350735 Msa0210930:intron 50.0%
GTCACTACCGGTAACTCTGA+AGG + chr2_1:51350776-51350795 None:intergenic 50.0%
! TCCAAGAAGTGGAAGTGCGA+CGG + chr2_1:51350798-51350817 None:intergenic 50.0%
TTACTTGCCACGTAGGTCAC+TGG - chr2_1:51350891-51350910 Msa0210930:CDS 50.0%
ACTTTGACCAGTGACCTACG+TGG + chr2_1:51350901-51350920 None:intergenic 50.0%
CGCGCCAAAAACACAATTGG+TGG + chr2_1:51350998-51351017 None:intergenic 50.0%
TACGGAGGTTCCGATGCTTC+CGG - chr2_1:51349416-51349435 Msa0210930:CDS 55.0%
ACTAGACGTACCCATGGTGC+CGG + chr2_1:51349438-51349457 None:intergenic 55.0%
AAAGGCGACAGGGACGATTC+CGG + chr2_1:51349885-51349904 None:intergenic 55.0%
GTAGGGTACAAACCGGCGAA+AGG + chr2_1:51349903-51349922 None:intergenic 55.0%
! TGCCATGTAGGAAGCGTGGT+GGG - chr2_1:51350572-51350591 Msa0210930:CDS 55.0%
ATCCCACCACGCTTCCTACA+TGG + chr2_1:51350577-51350596 None:intergenic 55.0%
! GTAGGAAGCGTGGTGGGATT+AGG - chr2_1:51350578-51350597 Msa0210930:CDS 55.0%
ATCAGCAACGTTGCAGGTGC+AGG - chr2_1:51350640-51350659 Msa0210930:CDS 55.0%
TCAGCAACGTTGCAGGTGCA+GGG - chr2_1:51350641-51350660 Msa0210930:CDS 55.0%
CAGGTGCAGGGGATATAGTG+AGG - chr2_1:51350653-51350672 Msa0210930:CDS 55.0%
TGCCCCCAGTTTCTGCTCAT+TGG + chr2_1:51350712-51350731 None:intergenic 55.0%
ACCGTCGCACTTCCACTTCT+TGG - chr2_1:51350794-51350813 Msa0210930:intron 55.0%
TACGGAGGTTCCGATGCTTC+CGG - chr2_1:51349416-51349435 Msa0210930:CDS 55.0%
ACTAGACGTACCCATGGTGC+CGG + chr2_1:51349438-51349457 None:intergenic 55.0%
AAAGGCGACAGGGACGATTC+CGG + chr2_1:51349885-51349904 None:intergenic 55.0%
GTAGGGTACAAACCGGCGAA+AGG + chr2_1:51349903-51349922 None:intergenic 55.0%
! TGCCATGTAGGAAGCGTGGT+GGG - chr2_1:51350572-51350591 Msa0210930:CDS 55.0%
ATCCCACCACGCTTCCTACA+TGG + chr2_1:51350577-51350596 None:intergenic 55.0%
! GTAGGAAGCGTGGTGGGATT+AGG - chr2_1:51350578-51350597 Msa0210930:CDS 55.0%
ATCAGCAACGTTGCAGGTGC+AGG - chr2_1:51350640-51350659 Msa0210930:CDS 55.0%
TCAGCAACGTTGCAGGTGCA+GGG - chr2_1:51350641-51350660 Msa0210930:CDS 55.0%
CAGGTGCAGGGGATATAGTG+AGG - chr2_1:51350653-51350672 Msa0210930:CDS 55.0%
TGCCCCCAGTTTCTGCTCAT+TGG + chr2_1:51350712-51350731 None:intergenic 55.0%
ACCGTCGCACTTCCACTTCT+TGG - chr2_1:51350794-51350813 Msa0210930:intron 55.0%
TTCCGATGCTTCCGGCACCA+TGG - chr2_1:51349424-51349443 Msa0210930:CDS 60.0%
TCCGATGCTTCCGGCACCAT+GGG - chr2_1:51349425-51349444 Msa0210930:CDS 60.0%
! ACCCATGGTGCCGGAAGCAT+CGG + chr2_1:51349429-51349448 None:intergenic 60.0%
CAAACCGGCGAAAGGCGACA+GGG + chr2_1:51349895-51349914 None:intergenic 60.0%
ACAAACCGGCGAAAGGCGAC+AGG + chr2_1:51349896-51349915 None:intergenic 60.0%
! AGGGTGCCATGTAGGAAGCG+TGG - chr2_1:51350568-51350587 Msa0210930:CDS 60.0%
! GTGCCATGTAGGAAGCGTGG+TGG - chr2_1:51350571-51350590 Msa0210930:CDS 60.0%
CAGCAACGTTGCAGGTGCAG+GGG - chr2_1:51350642-51350661 Msa0210930:CDS 60.0%
! GGAAGTGCGACGGTCACTAC+CGG + chr2_1:51350788-51350807 None:intergenic 60.0%
TTCCGATGCTTCCGGCACCA+TGG - chr2_1:51349424-51349443 Msa0210930:CDS 60.0%
TCCGATGCTTCCGGCACCAT+GGG - chr2_1:51349425-51349444 Msa0210930:CDS 60.0%
! ACCCATGGTGCCGGAAGCAT+CGG + chr2_1:51349429-51349448 None:intergenic 60.0%
CAAACCGGCGAAAGGCGACA+GGG + chr2_1:51349895-51349914 None:intergenic 60.0%
ACAAACCGGCGAAAGGCGAC+AGG + chr2_1:51349896-51349915 None:intergenic 60.0%
! AGGGTGCCATGTAGGAAGCG+TGG - chr2_1:51350568-51350587 Msa0210930:CDS 60.0%
! GTGCCATGTAGGAAGCGTGG+TGG - chr2_1:51350571-51350590 Msa0210930:CDS 60.0%
CAGCAACGTTGCAGGTGCAG+GGG - chr2_1:51350642-51350661 Msa0210930:CDS 60.0%
! GGAAGTGCGACGGTCACTAC+CGG + chr2_1:51350788-51350807 None:intergenic 60.0%
TCGTCCCTGTCGCCTTTCGC+CGG - chr2_1:51349888-51349907 Msa0210930:intron 65.0%
TCGTCCCTGTCGCCTTTCGC+CGG - chr2_1:51349888-51349907 Msa0210930:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 51349163 51351125 51349163 ID=Msa0210930;Name=Msa0210930
chr2_1 mRNA 51349163 51351125 51349163 ID=Msa0210930-mRNA-1;Parent=Msa0210930;Name=Msa0210930-mRNA-1;_AED=0.06;_eAED=0.06;_QI=130|1|1|1|1|1|3|246|260
chr2_1 exon 51349163 51349718 51349163 ID=Msa0210930-mRNA-1:exon:14340;Parent=Msa0210930-mRNA-1
chr2_1 exon 51350379 51350697 51350379 ID=Msa0210930-mRNA-1:exon:14339;Parent=Msa0210930-mRNA-1
chr2_1 exon 51350842 51351125 51350842 ID=Msa0210930-mRNA-1:exon:14338;Parent=Msa0210930-mRNA-1
chr2_1 five_prime_UTR 51350996 51351125 51350996 ID=Msa0210930-mRNA-1:five_prime_utr;Parent=Msa0210930-mRNA-1
chr2_1 CDS 51350842 51350995 51350842 ID=Msa0210930-mRNA-1:cds;Parent=Msa0210930-mRNA-1
chr2_1 CDS 51350379 51350697 51350379 ID=Msa0210930-mRNA-1:cds;Parent=Msa0210930-mRNA-1
chr2_1 CDS 51349409 51349718 51349409 ID=Msa0210930-mRNA-1:cds;Parent=Msa0210930-mRNA-1
chr2_1 three_prime_UTR 51349163 51349408 51349163 ID=Msa0210930-mRNA-1:three_prime_utr;Parent=Msa0210930-mRNA-1
Gene Sequence

>Msa0210930

ATGGGTATGGTGAGTATGGTTTACATTGTGACTCTTATTATGTCACTAACAATGTGGATGGTAAATGCTAGAATCCCAGGTGTTTACAATGGTGGTGCATGGCAAACAGCTCATGCCACTTTTTACGGAGGTTCCGATGCTTCCGGCACCATGGGAGGAGCATGTGGATATGGAAACTTGTATAGTCAAGGTTATGGAGTTAACACAGCAGCATTAAGCACAGCACTATTCAACAATGGACTAAGTTGTGGTTCTTGTTTTGAATTGAAGTGTGCAAATGACAAGCAGTGGTGTCATTCTGGTAGCCCTTCCATTTTCATCACAGCAACTAACTTTTGTCCTCCTAATTTTGCTCAACCTAGTGACAATGGTGGTTGGTGTAACCCTCCTCGTCCTCACTTTGATCTTGCCATGCCTATGTTCCTTAAAATCGCTGAATATCGCGCCGGAATCGTCCCTGTCGCCTTTCGCCGGGTGCCATGTAGGAAGCGTGGTGGGATTAGGTTCACAATAAACGGATTCCGTTACTTTAACTTAGTCCTAATCAGCAACGTTGCAGGTGCAGGGGATATAGTGAGGACCTATGTTAAGGGCACTAAAACAGGGTGGATGCCAATGAGCAGAAACTGGGGGCAAAATTGGCAATCAAATTCAGTTTTGGTGGGTCAAGCTTTGTCCTTCAGAGTTACCGGTAGTGACCGTCGCACTTCCACTTCTTGGAACATTGCTCCACATAATTGGCAATTTGGTCAAACTTTCACTGGAAAGAATTTTCGTGTTTGA
Protein sequence

>Msa0210930

MGMVSMVYIVTLIMSLTMWMVNARIPGVYNGGAWQTAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCANDKQWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKRGGIRFTINGFRYFNLVLISNVAGAGDIVRTYVKGTKTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNIAPHNWQFGQTFTGKNFRV*