AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0220800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220800 MtrunA17_Chr7g0222441 83.243 185 27 3 57 241 264 444 2.29e-97 301
Msa0220800 MtrunA17_Chr8g0341321 75.806 186 41 3 56 241 250 431 2.37e-88 277
Msa0220800 MtrunA17_Chr8g0358431 78.107 169 34 2 56 224 40 205 1.05e-86 261
Msa0220800 MtrunA17_Chr6g0458971 60.784 153 50 1 75 227 212 354 4.32e-54 186
Msa0220800 MtrunA17_Chr7g0228611 60.131 153 51 1 75 227 209 351 8.47e-54 185
Msa0220800 MtrunA17_Chr8g0356771 84.211 95 15 0 76 170 71 165 2.18e-51 169
Msa0220800 MtrunA17_Chr7g0271531 59.477 153 52 3 75 227 299 441 4.24e-50 177
Msa0220800 MtrunA17_Chr8g0356701 73.333 105 27 1 137 241 1 104 3.67e-47 156
Msa0220800 MtrunA17_Chr8g0356781 67.143 70 22 1 172 241 1 69 7.91e-23 95.5
Msa0220800 MtrunA17_Chr2g0326781 91.111 45 3 1 304 347 538 582 1.10e-18 87.8
Msa0220800 MtrunA17_Chr4g0035581 100.000 36 0 0 228 263 317 352 3.89e-16 80.1
Msa0220800 MtrunA17_Chr1g0199661 56.364 55 22 1 304 358 510 562 7.41e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220800 AT5G13110.1 78.610 187 36 3 57 243 265 447 1.23e-93 292
Msa0220800 AT1G24280.1 83.041 171 26 2 57 227 268 435 4.75e-92 288
Msa0220800 AT5G35790.1 73.118 186 46 3 56 241 245 426 5.02e-86 271
Msa0220800 AT3G27300.1 62.092 153 48 1 75 227 210 352 1.03e-55 191
Msa0220800 AT3G27300.3 62.092 153 48 1 75 227 210 352 1.03e-55 191
Msa0220800 AT3G27300.2 62.092 153 48 1 75 227 210 352 1.03e-55 191
Msa0220800 AT3G27300.5 62.092 153 48 1 75 227 264 406 4.39e-55 190
Msa0220800 AT3G27300.4 62.092 153 48 1 75 227 281 423 4.65e-55 191
Msa0220800 AT5G40760.2 57.396 169 62 1 59 227 193 351 5.40e-54 186
Msa0220800 AT5G40760.1 57.396 169 62 1 59 227 193 351 5.40e-54 186
Msa0220800 AT1G09420.1 55.844 154 55 3 75 227 324 465 6.61e-47 169
Msa0220800 AT1G09420.2 51.829 164 56 4 75 227 324 475 2.24e-43 159
Msa0220800 AT2G16440.1 39.098 133 65 4 147 263 227 359 2.90e-15 77.8
Msa0220800 AT2G28320.1 77.778 45 9 1 304 347 548 592 3.44e-15 77.8
Msa0220800 AT3G54800.2 66.667 45 14 1 304 347 545 589 3.66e-12 68.2
Msa0220800 AT3G54800.1 66.667 45 14 1 304 347 545 589 3.66e-12 68.2

Find 91 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATATTCTCAGAAGATTT+TGG 0.217136 2_1:+69273857 Msa0220800:CDS
CTCTGGTGTGGTTCTTATAT+TGG 0.220904 2_1:-69274471 None:intergenic
TGTAGGTACTTTGACAATTA+TGG 0.237604 2_1:+69273979 Msa0220800:intron
AGCAATATGGTGAAAGAAAA+TGG 0.245087 2_1:+69273243 Msa0220800:CDS
GGGCAGCCGCGGCAAATGTC+TGG 0.287615 2_1:-69274552 None:intergenic
CTTACTATTGCATGACAAAC+TGG 0.357680 2_1:+69275552 Msa0220800:CDS
GATGATCTTGGTGGCCGTCC+TGG 0.359921 2_1:+69276860 Msa0220800:CDS
AGCAAATAGATAAGTGGTTA+AGG 0.372183 2_1:-69276789 None:intergenic
GGAGGAAGAAGAACGGGAAC+GGG 0.374447 2_1:+69271203 Msa0220800:CDS
TCGATGAAAGTATCCATATC+AGG 0.376038 2_1:-69276172 None:intergenic
ACTGGAAACTCCTGTTAGTT+TGG 0.382061 2_1:+69274056 Msa0220800:CDS
TATAGAATCGATCACTATCT+TGG 0.382137 2_1:+69273743 Msa0220800:intron
TCCTCTACATCCAAACTAAC+AGG 0.382610 2_1:-69274066 None:intergenic
AGTCTGGCTGATACCTGATA+TGG 0.388600 2_1:+69276159 Msa0220800:intron
CATCGCACCTGATATGTCTT+TGG 0.395784 2_1:-69276232 None:intergenic
AGAAGAACGGGAACGGGAAA+GGG 0.396624 2_1:+69271209 Msa0220800:CDS
CATGACAAACTGGTGGATAC+TGG 0.399287 2_1:+69275562 Msa0220800:CDS
ACTACATCCTCGAGTTTAAT+CGG 0.412521 2_1:-69274442 None:intergenic
AAAGAAACCTACTTTAGATA+TGG 0.414269 2_1:-69277110 None:intergenic
AAAAGGACCAAAGACATATC+AGG 0.426577 2_1:+69276225 Msa0220800:CDS
AAAAGGGGAGAAACGGGAAC+GGG 0.427372 2_1:+69271182 Msa0220800:CDS
GTCTGGGTTAAGCTGTCCTT+TGG 0.440910 2_1:-69274535 None:intergenic
ATCTGTAGAAGTAAAGTGAT+AGG 0.442218 2_1:+69270975 Msa0220800:intron
AAGAAGAACGGGAACGGGAA+AGG 0.451694 2_1:+69271208 Msa0220800:CDS
CATAAAAGCAAATAGATAAG+TGG 0.452901 2_1:-69276795 None:intergenic
ATGATCTTGGTGGCCGTCCT+GGG 0.462970 2_1:+69276861 Msa0220800:CDS
TGGATATGCAACACCTCCTC+TGG 0.463674 2_1:-69274488 None:intergenic
GCAATATGGTGAAAGAAAAT+GGG 0.474578 2_1:+69273244 Msa0220800:CDS
GGAACGGGAGGAAGAAGAAC+GGG 0.475533 2_1:+69271197 Msa0220800:CDS
CCTCCCTCAGGTATCTCGTC+AGG 0.476130 2_1:-69275511 None:intergenic
ATGATTAAAGGAAACTGATA+AGG 0.479594 2_1:+69273213 Msa0220800:intron
ATCGAAAATTTAAACAGCGT+TGG 0.484696 2_1:+69276190 Msa0220800:CDS
ATAAGGTTGGTGAAGCAATA+TGG 0.490665 2_1:+69273230 Msa0220800:CDS
GTCATGATCTTAAGAAAAGA+AGG 0.490748 2_1:-69277083 None:intergenic
CTTCATAGATAATGCAAGAT+GGG 0.490793 2_1:+69274576 Msa0220800:CDS
CTTGCAGAAATATGCAGCAC+AGG 0.492843 2_1:+69277007 Msa0220800:intron
TCCTGTTAGTTTGGATGTAG+AGG 0.492884 2_1:+69274065 Msa0220800:CDS
AATACTAGTCCTCTTTGCAC+TGG 0.494010 2_1:+69274038 Msa0220800:CDS
AGAGGACATTAGAAATGAAA+AGG 0.504615 2_1:+69274083 Msa0220800:CDS
GACAGAAGGGAAGATGATCT+TGG 0.506460 2_1:+69276848 Msa0220800:CDS
TGCAAATGGTTGCTGCAGAT+TGG 0.511099 2_1:+69276816 Msa0220800:CDS
TTAAGAAAAGAAGGATTCAA+AGG 0.515731 2_1:-69277074 None:intergenic
CCGTCCTGGGAGCATTATGC+AGG 0.517123 2_1:+69276874 Msa0220800:CDS
GGGAGGAAGAAGAACGGGAA+CGG 0.518287 2_1:+69271202 Msa0220800:CDS
AGGGGAGAAACGGGAACGGG+AGG 0.518667 2_1:+69271185 Msa0220800:CDS
TAGATAATGCAAGATGGGAT+GGG 0.518772 2_1:+69274581 Msa0220800:CDS
CTGGTGGATACTGGAAAGCC+AGG 0.518819 2_1:+69275571 Msa0220800:CDS
GGCAGCCGCGGCAAATGTCT+GGG 0.520346 2_1:-69274551 None:intergenic
GTGTGAGGCGTTCCTCCCTC+AGG 0.520495 2_1:-69275523 None:intergenic
TGTATTGCCTCGACCACAAA+GGG 0.520587 2_1:-69273820 None:intergenic
ATCTATGAAGTGGGCAGCCG+CGG 0.523740 2_1:-69274563 None:intergenic
CTATCTTGGAAAAGAGCTTG+TGG 0.529498 2_1:+69273757 Msa0220800:CDS
TTTGTTGTACATCAGGTGAC+TGG 0.533031 2_1:+69275674 Msa0220800:intron
TAAGAAAAGAAGGATTCAAA+GGG 0.534209 2_1:-69277073 None:intergenic
TTAAAGGAAACTGATAAGGT+TGG 0.535969 2_1:+69273217 Msa0220800:intron
CTCACCTCAACTCTGTCACC+TGG 0.549979 2_1:-69275589 None:intergenic
ATCTTGCATTATCTATGAAG+TGG 0.550073 2_1:-69274573 None:intergenic
ATAGATAATGCAAGATGGGA+TGG 0.550173 2_1:+69274580 Msa0220800:CDS
TTGGTACTGAAGGACGTGGC+AGG 0.552068 2_1:+69273876 Msa0220800:CDS
AAAGTGATAGGAGAAGTTGC+TGG 0.567098 2_1:+69270987 Msa0220800:CDS
AGAAATATGCAGCACAGGGT+GGG 0.567302 2_1:+69277012 Msa0220800:intron
ATGCAACACCTCCTCTGGTG+TGG 0.571539 2_1:-69274483 None:intergenic
ACTTCATAGATAATGCAAGA+TGG 0.584523 2_1:+69274575 Msa0220800:CDS
GGGAACGGGAGGAAGAAGAA+CGG 0.587711 2_1:+69271196 Msa0220800:CDS
ATTGGTTGAGATCTGACAGA+AGG 0.589843 2_1:+69276834 Msa0220800:CDS
CAGAAATATGCAGCACAGGG+TGG 0.591099 2_1:+69277011 Msa0220800:intron
GTGATAGGAGAAGTTGCTGG+TGG 0.599516 2_1:+69270990 Msa0220800:CDS
AGATAATGCAAGATGGGATG+GGG 0.599941 2_1:+69274582 Msa0220800:CDS
TTGGTTGAGATCTGACAGAA+GGG 0.602460 2_1:+69276835 Msa0220800:CDS
TGATGACAAAACTGTACCAA+AGG 0.605343 2_1:+69274519 Msa0220800:CDS
TGGGAAATCTCTATTCATGA+AGG 0.608432 2_1:+69271010 Msa0220800:CDS
TCAACCTGCATAATGCTCCC+AGG 0.618526 2_1:-69276878 None:intergenic
TGATAGGAGAAGTTGCTGGT+GGG 0.619992 2_1:+69270991 Msa0220800:CDS
TCTTGCATTATCTATGAAGT+GGG 0.621537 2_1:-69274572 None:intergenic
TATAAGAACCACACCAGAGG+AGG 0.636996 2_1:+69274475 Msa0220800:CDS
AAAGCCAGGTGACAGAGTTG+AGG 0.641668 2_1:+69275585 Msa0220800:CDS
ATGTATTGCCTCGACCACAA+AGG 0.643641 2_1:-69273821 None:intergenic
ACTATTGCATGACAAACTGG+TGG 0.645480 2_1:+69275555 Msa0220800:CDS
TATGAGACCGATTAAACTCG+AGG 0.649881 2_1:+69274435 Msa0220800:CDS
TTGCAGAAATATGCAGCACA+GGG 0.650088 2_1:+69277008 Msa0220800:intron
CCTGCATAATGCTCCCAGGA+CGG 0.650448 2_1:-69276874 None:intergenic
GGAAAGGGCCGTCACAACTG+CGG 0.659297 2_1:+69271224 Msa0220800:CDS
CAGGAGTTTCCAGTGCAAAG+AGG 0.665601 2_1:-69274047 None:intergenic
AATAGTAAGCTAACAGTGTG+AGG 0.667908 2_1:-69275538 None:intergenic
TCTCTCTTACTCTTCCTCAC+CGG 0.671004 2_1:-69271262 None:intergenic
AGAAGGGAAGATGATCTTGG+TGG 0.671197 2_1:+69276851 Msa0220800:CDS
CAATATAAGAACCACACCAG+AGG 0.676256 2_1:+69274472 Msa0220800:CDS
CTTAACCCAGACATTTGCCG+CGG 0.676329 2_1:+69274546 Msa0220800:CDS
GACACCTGACGAGATACCTG+AGG 0.684151 2_1:+69275507 Msa0220800:CDS
ACACCTGACGAGATACCTGA+GGG 0.690721 2_1:+69275508 Msa0220800:CDS
CCTGACGAGATACCTGAGGG+AGG 0.736290 2_1:+69275511 Msa0220800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTATTTAAACTGTAA+TGG + chr2_1:69275295-69275314 Msa0220800:intron 10.0%
!! ATAATTATTTAAACTGTAAT+GGG + chr2_1:69275296-69275315 Msa0220800:intron 10.0%
!!! ATATAGAACATTTAAAATTT+TGG - chr2_1:69278171-69278190 None:intergenic 10.0%
!!! TTGTAATTTTTTTATAAATG+AGG + chr2_1:69278581-69278600 Msa0220800:intron 10.0%
!!! TGTAATTTTTTTATAAATGA+GGG + chr2_1:69278582-69278601 Msa0220800:intron 10.0%
!!! AAACACTAATTTTATTTTAT+TGG + chr2_1:69278718-69278737 Msa0220800:intron 10.0%
!!! TTACTGAAATTGATAATTTT+AGG + chr2_1:69270927-69270946 Msa0220800:intron 15.0%
!!! ATTTTTGTTTTGTTTTGTTT+TGG + chr2_1:69271090-69271109 Msa0220800:intron 15.0%
!!! ATTTTTGTTTTGTTTTGTTT+TGG + chr2_1:69271090-69271109 Msa0220800:intron 15.0%
!! TGAAAAGAAAGAAAAAAAAA+GGG + chr2_1:69271166-69271185 Msa0220800:intron 15.0%
!! AAGTAACTAAAGAAAAATTA+GGG + chr2_1:69271490-69271509 Msa0220800:intron 15.0%
!! TAATCTAAATCAACTAATTT+AGG + chr2_1:69271635-69271654 Msa0220800:intron 15.0%
!! AATCTAAATCAACTAATTTA+GGG + chr2_1:69271636-69271655 Msa0220800:intron 15.0%
!! ATTCTTATTGTATATGAAAA+AGG + chr2_1:69271853-69271872 Msa0220800:intron 15.0%
!!! ATTGATTTTGAATTTTTAGA+CGG + chr2_1:69271951-69271970 Msa0220800:intron 15.0%
!! TATAACTTACATATTTGAAA+TGG - chr2_1:69272723-69272742 None:intergenic 15.0%
!!! TGGTTATATACTTTTTTTAT+AGG + chr2_1:69274113-69274132 Msa0220800:intron 15.0%
!!! ATTTAAAACAGATGAATTAA+AGG - chr2_1:69274355-69274374 None:intergenic 15.0%
!!! TTCTTATTTTATATCAAATG+AGG - chr2_1:69274908-69274927 None:intergenic 15.0%
!!! TTTTTTTTTGCTAAATTAGA+CGG + chr2_1:69275196-69275215 Msa0220800:intron 15.0%
!! ATCAATATATTTATCATACA+GGG - chr2_1:69275923-69275942 None:intergenic 15.0%
!! ATATATAAGTAATTACTTGA+TGG - chr2_1:69276941-69276960 None:intergenic 15.0%
!! TTCATAGCTATTATTATATT+TGG + chr2_1:69277303-69277322 Msa0220800:intron 15.0%
!!! TTTTTAAAGTGATATTTTGT+TGG + chr2_1:69278257-69278276 Msa0220800:intron 15.0%
!!! ATTTTGGTTAATAAAATTGT+GGG - chr2_1:69278334-69278353 None:intergenic 15.0%
!! TGAGTGTTTATACTATATAT+AGG + chr2_1:69270563-69270582 Msa0220800:intron 20.0%
!! TTTAATTAAACCTAATTACC+TGG - chr2_1:69270885-69270904 None:intergenic 20.0%
!! TTTCAGTAAAACAAATCAAA+AGG - chr2_1:69270916-69270935 None:intergenic 20.0%
!! GTGAAAAGAAAGAAAAAAAA+AGG + chr2_1:69271165-69271184 Msa0220800:intron 20.0%
!! GAAAAGAAAGAAAAAAAAAG+GGG + chr2_1:69271167-69271186 Msa0220800:intron 20.0%
!! GAAGTAACTAAAGAAAAATT+AGG + chr2_1:69271489-69271508 Msa0220800:intron 20.0%
!! AGTAACTAAAGAAAAATTAG+GGG + chr2_1:69271491-69271510 Msa0220800:intron 20.0%
!! ATCTAAATCAACTAATTTAG+GGG + chr2_1:69271637-69271656 Msa0220800:intron 20.0%
!!! TTGATTTTGAATTTTTAGAC+GGG + chr2_1:69271952-69271971 Msa0220800:intron 20.0%
!! GAAATTGATTACTTTGAATT+TGG + chr2_1:69272125-69272144 Msa0220800:intron 20.0%
!! ATTACTTTGAATTTGGATAT+GGG + chr2_1:69272132-69272151 Msa0220800:intron 20.0%
!!! ATCTAAGATTTGATATGTTA+TGG + chr2_1:69272420-69272439 Msa0220800:intron 20.0%
!! ATATTTGTTTATACGCTTAA+AGG - chr2_1:69272500-69272519 None:intergenic 20.0%
!! TACCAAACTAAATATAAACA+TGG + chr2_1:69272741-69272760 Msa0220800:intron 20.0%
!! ATCCATGTTTATATTTAGTT+TGG - chr2_1:69272746-69272765 None:intergenic 20.0%
!! AAAATTTCCAAGATAATATC+CGG - chr2_1:69272769-69272788 None:intergenic 20.0%
!! CAAAATAAAAAAAAGTGACA+GGG - chr2_1:69272885-69272904 None:intergenic 20.0%
!! TCAAAATAAAAAAAAGTGAC+AGG - chr2_1:69272886-69272905 None:intergenic 20.0%
!!! AATGATTTTCTTGATTACTA+AGG + chr2_1:69273022-69273041 Msa0220800:intron 20.0%
!! TTATTTGGTATGATGATTAA+AGG + chr2_1:69273201-69273220 Msa0220800:intron 20.0%
!!! TCTATTTTCATAAGCTATAT+TGG + chr2_1:69273534-69273553 Msa0220800:intron 20.0%
!!! GTAAAGTGCTTTATTTAAAA+TGG + chr2_1:69273711-69273730 Msa0220800:intron 20.0%
!! CAAAAATTAGATTTGAGAAT+CGG - chr2_1:69273799-69273818 None:intergenic 20.0%
!!! CACTTTTTATGATCTTAAAA+TGG + chr2_1:69273925-69273944 Msa0220800:intron 20.0%
!!! TTTCTACTTATATTTAAGGT+CGG - chr2_1:69274169-69274188 None:intergenic 20.0%
!! AACCTTTCTACTTATATTTA+AGG - chr2_1:69274173-69274192 None:intergenic 20.0%
!!! GATACTTTATTTAGTACAAA+AGG - chr2_1:69274771-69274790 None:intergenic 20.0%
!! TTGACTTTGATGTTATATAT+TGG - chr2_1:69274795-69274814 None:intergenic 20.0%
!!! AATTTGTTTACAATACACTA+TGG + chr2_1:69274926-69274945 Msa0220800:intron 20.0%
!!! AGATTTTTAAGTATTTGAGA+TGG + chr2_1:69275080-69275099 Msa0220800:intron 20.0%
!! AAAACACATTGTTCAAAATA+GGG - chr2_1:69275364-69275383 None:intergenic 20.0%
!!! AACATATCTTTTCTAATTTC+AGG + chr2_1:69275452-69275471 Msa0220800:intron 20.0%
!! TTACTGATAAACAAATTATG+AGG + chr2_1:69275476-69275495 Msa0220800:intron 20.0%
!! CATCAATATATTTATCATAC+AGG - chr2_1:69275924-69275943 None:intergenic 20.0%
!! ATAAATATATTGATGAGCAT+GGG + chr2_1:69275929-69275948 Msa0220800:intron 20.0%
!!! TATGTGTTGTTTAATTTTTC+AGG + chr2_1:69276128-69276147 Msa0220800:intron 20.0%
!!! GAAGAAAGGTTTTAAAATTT+TGG + chr2_1:69276379-69276398 Msa0220800:intron 20.0%
!! AAATCCATGATTTACTAAAA+AGG - chr2_1:69277184-69277203 None:intergenic 20.0%
!! TTAACAGTAAAAGATTAGAA+TGG - chr2_1:69277344-69277363 None:intergenic 20.0%
!! TTGTAATTGTATATAACCTT+AGG + chr2_1:69277598-69277617 Msa0220800:intron 20.0%
!!! TGAATCCATTGATTTTAATT+AGG - chr2_1:69277643-69277662 None:intergenic 20.0%
!!! CATATCAATTTTTCTTAACT+GGG - chr2_1:69277698-69277717 None:intergenic 20.0%
!!! TTAAATTTGAGTTACAAAAG+GGG - chr2_1:69277996-69278015 None:intergenic 20.0%
!!! GTTAAATTTGAGTTACAAAA+GGG - chr2_1:69277997-69278016 None:intergenic 20.0%
!!! ATTGACGTTTTTAAATTCAA+TGG - chr2_1:69278122-69278141 None:intergenic 20.0%
!!! CATTTTGGTTAATAAAATTG+TGG - chr2_1:69278335-69278354 None:intergenic 20.0%
!!! CACAATTTTATTAACCAAAA+TGG + chr2_1:69278333-69278352 Msa0220800:intron 20.0%
!!! ATGTTTATTATTTTGTTCAG+TGG + chr2_1:69278385-69278404 Msa0220800:intron 20.0%
!! ATTACAAATTTCAACCAAAT+GGG - chr2_1:69278568-69278587 None:intergenic 20.0%
!! AATTACAAATTTCAACCAAA+TGG - chr2_1:69278569-69278588 None:intergenic 20.0%
!! ACACTATCAAACTATAATTA+GGG - chr2_1:69278876-69278895 None:intergenic 20.0%
!! TACACTATCAAACTATAATT+AGG - chr2_1:69278877-69278896 None:intergenic 20.0%
!!! GACATTTTTTTAAACACTCT+TGG - chr2_1:69270460-69270479 None:intergenic 25.0%
!!! CATTTTGGTAAATTGGTAAT+TGG + chr2_1:69270540-69270559 Msa0220800:intron 25.0%
! TGATGATTAATTCATCATGA+GGG - chr2_1:69270778-69270797 None:intergenic 25.0%
!! TTGATGATTAATTCATCATG+AGG - chr2_1:69270779-69270798 None:intergenic 25.0%
!!! TTTTGTTTTGTTTTGGATTG+TGG + chr2_1:69271097-69271116 Msa0220800:intron 25.0%
! GTTTGATTGAAAATTTGTGA+TGG + chr2_1:69271367-69271386 Msa0220800:intron 25.0%
! TTGATTTAGATTATGCATGA+GGG - chr2_1:69271628-69271647 None:intergenic 25.0%
! ATTCAATCAAATTATTCCAG+TGG - chr2_1:69271815-69271834 None:intergenic 25.0%
! ACTGGAATAATTTGATTGAA+TGG + chr2_1:69271814-69271833 Msa0220800:intron 25.0%
! CTGGAATAATTTGATTGAAT+GGG + chr2_1:69271815-69271834 Msa0220800:intron 25.0%
!!! ATTTGATTGAATGGGTTTTA+TGG + chr2_1:69271823-69271842 Msa0220800:intron 25.0%
! CATATGAATGATTCAATCAT+AGG + chr2_1:69272041-69272060 Msa0220800:intron 25.0%
!! TGATTCAATCATAGGTTTTA+TGG + chr2_1:69272049-69272068 Msa0220800:intron 25.0%
! GATTACTTTGAATTTGGATA+TGG + chr2_1:69272131-69272150 Msa0220800:intron 25.0%
! ATTGAGTGAATTATATGTTC+AGG + chr2_1:69272301-69272320 Msa0220800:intron 25.0%
!! AACCTTTTTATTCACTATGT+TGG - chr2_1:69272389-69272408 None:intergenic 25.0%
! ACTAAATATAAACATGGATC+CGG + chr2_1:69272747-69272766 Msa0220800:intron 25.0%
!! TCAAGAAAATCATTCTTTTG+AGG - chr2_1:69273016-69273035 None:intergenic 25.0%
!!! TTTGTTTTGTTGTTTGATTG+TGG + chr2_1:69273086-69273105 Msa0220800:intron 25.0%
! ATGATTAAAGGAAACTGATA+AGG + chr2_1:69273213-69273232 Msa0220800:intron 25.0%
! ACTTATATGATAAGTGTGAA+TGG - chr2_1:69273447-69273466 None:intergenic 25.0%
!! TTGATATTCTCAGAAGATTT+TGG + chr2_1:69273857-69273876 Msa0220800:CDS 25.0%
! GACCTTAAATATAAGTAGAA+AGG + chr2_1:69274168-69274187 Msa0220800:intron 25.0%
!! ACAAATACATGTACCTTTTT+CGG + chr2_1:69274205-69274224 Msa0220800:intron 25.0%
! ACTTTCTTCTCAAAATCATT+TGG + chr2_1:69274281-69274300 Msa0220800:intron 25.0%
! CTTTCTTCTCAAAATCATTT+GGG + chr2_1:69274282-69274301 Msa0220800:intron 25.0%
! ATAACATCAAAGTCAATAGT+AGG + chr2_1:69274799-69274818 Msa0220800:intron 25.0%
!! TCTCAATGACTACAAAATTT+TGG + chr2_1:69274868-69274887 Msa0220800:intron 25.0%
!!! CTTGTTATTATGCATCATAT+AGG - chr2_1:69275050-69275069 None:intergenic 25.0%
! TAAAAGAGATGGGAAAATAT+TGG - chr2_1:69275113-69275132 None:intergenic 25.0%
! AAACACATTGTTCAAAATAG+GGG - chr2_1:69275363-69275382 None:intergenic 25.0%
! CAAAACACATTGTTCAAAAT+AGG - chr2_1:69275365-69275384 None:intergenic 25.0%
!!! CTATTTTGAACAATGTGTTT+TGG + chr2_1:69275363-69275382 Msa0220800:intron 25.0%
! ATATTCTCATGTTTGTTCAA+TGG + chr2_1:69275639-69275658 Msa0220800:intron 25.0%
! GATTCATTTCATTGTTCTAA+AGG + chr2_1:69275870-69275889 Msa0220800:intron 25.0%
! GATAAATATATTGATGAGCA+TGG + chr2_1:69275928-69275947 Msa0220800:intron 25.0%
! TAAATATATTGATGAGCATG+GGG + chr2_1:69275930-69275949 Msa0220800:intron 25.0%
! TGTTTAAGAATCCGAAAAAA+GGG + chr2_1:69276543-69276562 Msa0220800:intron 25.0%
! CTGTATTGTGAAATCTTTAA+AGG + chr2_1:69276711-69276730 Msa0220800:intron 25.0%
! GAAAAAAATCTGATTGGTAA+AGG - chr2_1:69276745-69276764 None:intergenic 25.0%
! GTGAATGAAAAAAATCTGAT+TGG - chr2_1:69276751-69276770 None:intergenic 25.0%
! CATAAAAGCAAATAGATAAG+TGG - chr2_1:69276798-69276817 None:intergenic 25.0%
!!! TCTATTTGCTTTTATGCAAA+TGG + chr2_1:69276802-69276821 Msa0220800:CDS 25.0%
! ATGTTTACAATGAAAAACTC+AGG - chr2_1:69277038-69277057 None:intergenic 25.0%
!! TTTTTCATTGTAAACATCTG+TGG + chr2_1:69277041-69277060 Msa0220800:CDS 25.0%
! TAAGAAAAGAAGGATTCAAA+GGG - chr2_1:69277076-69277095 None:intergenic 25.0%
! TTAAGAAAAGAAGGATTCAA+AGG - chr2_1:69277077-69277096 None:intergenic 25.0%
! AAAGAAACCTACTTTAGATA+TGG - chr2_1:69277113-69277132 None:intergenic 25.0%
!!! CTTTCCTTTTTAGTAAATCA+TGG + chr2_1:69277177-69277196 Msa0220800:intron 25.0%
! TTAATCATGAAATTGCAAGT+TGG + chr2_1:69277202-69277221 Msa0220800:intron 25.0%
!!! CTTTGAAATTGGCATAATTT+CGG + chr2_1:69277236-69277255 Msa0220800:intron 25.0%
! AATTAATCAAAGTTCTCAAG+TGG + chr2_1:69277265-69277284 Msa0220800:intron 25.0%
!!! CATTGATTTTAATTAGGCAA+AGG - chr2_1:69277637-69277656 None:intergenic 25.0%
! CTTTGCCTAATTAAAATCAA+TGG + chr2_1:69277635-69277654 Msa0220800:intron 25.0%
!! GCATATCAATTTTTCTTAAC+TGG - chr2_1:69277699-69277718 None:intergenic 25.0%
! TAGTTTCTTTGATCATTCAT+TGG - chr2_1:69277721-69277740 None:intergenic 25.0%
!! TAGAGTGATTTTAAATCAAC+AGG + chr2_1:69277778-69277797 Msa0220800:intron 25.0%
! CATAAAATTTACTTCCTTCA+TGG + chr2_1:69277846-69277865 Msa0220800:intron 25.0%
!! GGTTAAATTTGAGTTACAAA+AGG - chr2_1:69277998-69278017 None:intergenic 25.0%
!!! TAACCTTATTTTTGTGATCA+TGG + chr2_1:69278013-69278032 Msa0220800:intron 25.0%
!!! AACCTTATTTTTGTGATCAT+GGG + chr2_1:69278014-69278033 Msa0220800:intron 25.0%
! ATCACAATATTAAGGACAAA+TGG - chr2_1:69278048-69278067 None:intergenic 25.0%
!! TTGTCATTTCCTATATTTGA+GGG - chr2_1:69278093-69278112 None:intergenic 25.0%
!! ATTGTCATTTCCTATATTTG+AGG - chr2_1:69278094-69278113 None:intergenic 25.0%
! GTTAATAAAATTGTGGGAAT+CGG - chr2_1:69278328-69278347 None:intergenic 25.0%
!!! TATTTACTTTTACAGCAACA+TGG - chr2_1:69278465-69278484 None:intergenic 25.0%
! TTGCTGTAAAAGTAAATAGA+AGG + chr2_1:69278467-69278486 Msa0220800:intron 25.0%
! AAAGGAATTGAGTATTTCAT+CGG - chr2_1:69278495-69278514 None:intergenic 25.0%
! ATACAATATCACTGGAAAAA+AGG - chr2_1:69278513-69278532 None:intergenic 25.0%
! TTTATAAATGAGGGTAGATA+AGG + chr2_1:69278591-69278610 Msa0220800:intron 25.0%
!! CTAAGATTTTCTTTGTTAGA+TGG + chr2_1:69278683-69278702 Msa0220800:intron 25.0%
! ATCAACTCAATTTATGTCTA+AGG + chr2_1:69278805-69278824 Msa0220800:intron 25.0%
! TTGACCATTTTACCCTTATT+AGG + chr2_1:69270515-69270534 Msa0220800:intron 30.0%
! TGACCATTTTACCCTTATTA+GGG + chr2_1:69270516-69270535 Msa0220800:intron 30.0%
! TTTGCATGATGATTTTCATG+GGG - chr2_1:69270742-69270761 None:intergenic 30.0%
! GTTTGCATGATGATTTTCAT+GGG - chr2_1:69270743-69270762 None:intergenic 30.0%
! AGTTTGCATGATGATTTTCA+TGG - chr2_1:69270744-69270763 None:intergenic 30.0%
TGAATGAATTGAAAGATCGA+AGG - chr2_1:69270860-69270879 None:intergenic 30.0%
TCTTTCAATTCATTCATTCC+AGG + chr2_1:69270864-69270883 Msa0220800:intron 30.0%
TTCATTCATTCCAGGTAATT+AGG + chr2_1:69270872-69270891 Msa0220800:intron 30.0%
!!! AGGTTTGATGCTTTTGATTT+TGG + chr2_1:69270947-69270966 Msa0220800:intron 30.0%
ATCTGTAGAAGTAAAGTGAT+AGG + chr2_1:69270975-69270994 Msa0220800:intron 30.0%
TGTGATAGATAGATTGTTGA+AGG + chr2_1:69271039-69271058 Msa0220800:intron 30.0%
AGAAAAAAAAAGGGGAGAAA+CGG + chr2_1:69271175-69271194 Msa0220800:CDS 30.0%
TCTAATTCTAATCTTGCATG+TGG + chr2_1:69271344-69271363 Msa0220800:intron 30.0%
CTAATTCTAATCTTGCATGT+GGG + chr2_1:69271345-69271364 Msa0220800:intron 30.0%
TGTGAGAAGAATGTTAAGTT+TGG + chr2_1:69271393-69271412 Msa0220800:intron 30.0%
GTGAGAAGAATGTTAAGTTT+GGG + chr2_1:69271394-69271413 Msa0220800:intron 30.0%
AATGTTAAGTTTGGGTAAGA+GGG + chr2_1:69271402-69271421 Msa0220800:intron 30.0%
AGAGTAGAAGAAATGGAATT+AGG + chr2_1:69271455-69271474 Msa0220800:intron 30.0%
GAGTAGAAGAAATGGAATTA+GGG + chr2_1:69271456-69271475 Msa0220800:intron 30.0%
CCTTTAATTCTTTATGGTGA+TGG - chr2_1:69271585-69271604 None:intergenic 30.0%
CCATCACCATAAAGAATTAA+AGG + chr2_1:69271582-69271601 Msa0220800:intron 30.0%
TCACCATAAAGAATTAAAGG+TGG + chr2_1:69271585-69271604 Msa0220800:intron 30.0%
CACCATAAAGAATTAAAGGT+GGG + chr2_1:69271586-69271605 Msa0220800:intron 30.0%
AACCCACCTTTAATTCTTTA+TGG - chr2_1:69271591-69271610 None:intergenic 30.0%
! GTTGATTTAGATTATGCATG+AGG - chr2_1:69271629-69271648 None:intergenic 30.0%
TGAATGATAGCATGATTGAA+AGG + chr2_1:69271776-69271795 Msa0220800:intron 30.0%
GGAGATTATAAAAATGAGCT+AGG + chr2_1:69271874-69271893 Msa0220800:intron 30.0%
!! TTTATTGCAGCAGTTGATAA+AGG + chr2_1:69272347-69272366 Msa0220800:intron 30.0%
TGCCAACATAGTGAATAAAA+AGG + chr2_1:69272384-69272403 Msa0220800:intron 30.0%
TCTCGCATAAACATATATGT+TGG + chr2_1:69272594-69272613 Msa0220800:intron 30.0%
! TCTTTGAAAGAGTTGCTTTA+TGG + chr2_1:69272662-69272681 Msa0220800:intron 30.0%
!! AATGTTTTCTGTTACTTGAC+AGG + chr2_1:69272909-69272928 Msa0220800:intron 30.0%
!! ATGTTTTCTGTTACTTGACA+GGG + chr2_1:69272910-69272929 Msa0220800:intron 30.0%
!!! TTGTTGTTTGATTGTGGTTT+TGG + chr2_1:69273092-69273111 Msa0220800:intron 30.0%
TTAAAGGAAACTGATAAGGT+TGG + chr2_1:69273217-69273236 Msa0220800:intron 30.0%
AGCAATATGGTGAAAGAAAA+TGG + chr2_1:69273243-69273262 Msa0220800:CDS 30.0%
GCAATATGGTGAAAGAAAAT+GGG + chr2_1:69273244-69273263 Msa0220800:CDS 30.0%
CTTTAACAAGATCATTCAAG+CGG + chr2_1:69273347-69273366 Msa0220800:intron 30.0%
!! AACAATCCTAGAAGTGTTTA+TGG + chr2_1:69273625-69273644 Msa0220800:intron 30.0%
TAATTAGACCATGTTTGGAT+TGG - chr2_1:69273672-69273691 None:intergenic 30.0%
ACAGATAATTAGACCATGTT+TGG - chr2_1:69273677-69273696 None:intergenic 30.0%
TATAGAATCGATCACTATCT+TGG + chr2_1:69273743-69273762 Msa0220800:intron 30.0%
! ATCTAATTTTTGACCCTTTG+TGG + chr2_1:69273807-69273826 Msa0220800:CDS 30.0%
! AAAAAGTGTAAATGCTGCAA+AGG - chr2_1:69273913-69273932 None:intergenic 30.0%
TGTAGGTACTTTGACAATTA+TGG + chr2_1:69273979-69273998 Msa0220800:intron 30.0%
AGAGGACATTAGAAATGAAA+AGG + chr2_1:69274083-69274102 Msa0220800:CDS 30.0%
AGAAATGAAAAGGTCTCATA+TGG + chr2_1:69274093-69274112 Msa0220800:intron 30.0%
! TACTTATATTTAAGGTCGGA+GGG - chr2_1:69274165-69274184 None:intergenic 30.0%
!!! ACCTTTTTCGGTCAAATATA+AGG + chr2_1:69274217-69274236 Msa0220800:intron 30.0%
CATGACTTTCAATTGCTTAA+TGG + chr2_1:69274388-69274407 Msa0220800:intron 30.0%
!! TACAGTTTTGTCATCAATGT+AGG - chr2_1:69274515-69274534 None:intergenic 30.0%
TCTTGCATTATCTATGAAGT+GGG - chr2_1:69274575-69274594 None:intergenic 30.0%
ATCTTGCATTATCTATGAAG+TGG - chr2_1:69274576-69274595 None:intergenic 30.0%
ACTTCATAGATAATGCAAGA+TGG + chr2_1:69274575-69274594 Msa0220800:CDS 30.0%
CTTCATAGATAATGCAAGAT+GGG + chr2_1:69274576-69274595 Msa0220800:CDS 30.0%
TGTATTCTGTATTGTGACAT+TGG - chr2_1:69274847-69274866 None:intergenic 30.0%
TAACCAAGAAACACTTATTC+TGG - chr2_1:69275173-69275192 None:intergenic 30.0%
!! GGTAGATTTTAGTGATAAGT+TGG + chr2_1:69275317-69275336 Msa0220800:intron 30.0%
! TTTAGTGATAAGTTGGATGA+TGG + chr2_1:69275324-69275343 Msa0220800:intron 30.0%
!!! TGGATTTTAGTTCATAAACC+TGG + chr2_1:69275418-69275437 Msa0220800:intron 30.0%
ATATGTTAATTGCAGTTTCC+AGG - chr2_1:69275439-69275458 None:intergenic 30.0%
TAAACAAATTATGAGGCTTC+AGG + chr2_1:69275483-69275502 Msa0220800:intron 30.0%
! ATCTATTTATCAGAGTGTCA+TGG - chr2_1:69275621-69275640 None:intergenic 30.0%
ATGTACAACAAAACACTCAT+GGG - chr2_1:69275666-69275685 None:intergenic 30.0%
AGACAAGATGAAAAATGCAA+AGG - chr2_1:69275806-69275825 None:intergenic 30.0%
! TGAATCATGCCAACTTTTAA+GGG - chr2_1:69275856-69275875 None:intergenic 30.0%
! ATGAATCATGCCAACTTTTA+AGG - chr2_1:69275857-69275876 None:intergenic 30.0%
AACAATTGACAACAAATGCA+GGG - chr2_1:69276088-69276107 None:intergenic 30.0%
AAACAATTGACAACAAATGC+AGG - chr2_1:69276089-69276108 None:intergenic 30.0%
!! TTTTCAGGAAATATACAGTC+TGG + chr2_1:69276143-69276162 Msa0220800:intron 30.0%
ATCGAAAATTTAAACAGCGT+TGG + chr2_1:69276190-69276209 Msa0220800:CDS 30.0%
GTTGGTTATCTACTCAAAAA+AGG + chr2_1:69276208-69276227 Msa0220800:CDS 30.0%
AGAGTTGCACATTAATAAGA+TGG - chr2_1:69276300-69276319 None:intergenic 30.0%
TATTATCCTCTTTGTACTCA+CGG + chr2_1:69276432-69276451 Msa0220800:intron 30.0%
GTGTTTAAGAATCCGAAAAA+AGG + chr2_1:69276542-69276561 Msa0220800:intron 30.0%
! AGCACATTCTTAAAGTATTC+CGG - chr2_1:69276600-69276619 None:intergenic 30.0%
TCATCGAATATGCAATTTCA+AGG + chr2_1:69276637-69276656 Msa0220800:intron 30.0%
CATCGAATATGCAATTTCAA+GGG + chr2_1:69276638-69276657 Msa0220800:intron 30.0%
ATCGAATATGCAATTTCAAG+GGG + chr2_1:69276639-69276658 Msa0220800:intron 30.0%
AGCAAATAGATAAGTGGTTA+AGG - chr2_1:69276792-69276811 None:intergenic 30.0%
GTCATGATCTTAAGAAAAGA+AGG - chr2_1:69277086-69277105 None:intergenic 30.0%
!! CTAATCTGAGTCTTTGAAAT+TGG + chr2_1:69277225-69277244 Msa0220800:intron 30.0%
! CAATTTTTCTTAACTGGGTT+CGG - chr2_1:69277693-69277712 None:intergenic 30.0%
CAGTAGAGTAATATATGTCA+TGG - chr2_1:69277958-69277977 None:intergenic 30.0%
AACCCATGATCACAAAAATA+AGG - chr2_1:69278019-69278038 None:intergenic 30.0%
CTCAGACAATCACAATATTA+AGG - chr2_1:69278056-69278075 None:intergenic 30.0%
CAATTTAGTCCCTCAAATAT+AGG + chr2_1:69278081-69278100 Msa0220800:intron 30.0%
!! AGGCATTTCATAAGTTTTGA+TGG + chr2_1:69278230-69278249 Msa0220800:intron 30.0%
!! GGATGATTTAGCTCTTAAAT+TGG - chr2_1:69278307-69278326 None:intergenic 30.0%
! TTTTACAGCAACATGGTTTA+TGG - chr2_1:69278458-69278477 None:intergenic 30.0%
! TTTTCCAGTGATATTGTATG+CGG + chr2_1:69278514-69278533 Msa0220800:intron 30.0%
! TCTTCTAAGAAGATGATTTC+AGG - chr2_1:69278632-69278651 None:intergenic 30.0%
! GACCATTTTACCCTTATTAG+GGG + chr2_1:69270517-69270536 Msa0220800:intron 35.0%
TACCAAAATGCCCCTAATAA+GGG - chr2_1:69270530-69270549 None:intergenic 35.0%
TTACCAAAATGCCCCTAATA+AGG - chr2_1:69270531-69270550 None:intergenic 35.0%
!!! TTAGGGGCATTTTGGTAAAT+TGG + chr2_1:69270533-69270552 Msa0220800:intron 35.0%
GGGGAAAATGATCTTAATTG+TGG - chr2_1:69270594-69270613 None:intergenic 35.0%
AGAGATGAGAGAGAAAATGA+GGG - chr2_1:69270615-69270634 None:intergenic 35.0%
! ATTTTCTCTCTCATCTCTCA+CGG + chr2_1:69270617-69270636 Msa0220800:intron 35.0%
! GTGAGGATTGTAGAATTTTG+GGG - chr2_1:69270714-69270733 None:intergenic 35.0%
! GGTGAGGATTGTAGAATTTT+GGG - chr2_1:69270715-69270734 None:intergenic 35.0%
! TGATGATTTTCATGGGGTTT+GGG - chr2_1:69270736-69270755 None:intergenic 35.0%
! ATGATGATTTTCATGGGGTT+TGG - chr2_1:69270737-69270756 None:intergenic 35.0%
AATTGAAAGATCGAAGGATG+GGG - chr2_1:69270854-69270873 None:intergenic 35.0%
GAATTGAAAGATCGAAGGAT+GGG - chr2_1:69270855-69270874 None:intergenic 35.0%
TGAATTGAAAGATCGAAGGA+TGG - chr2_1:69270856-69270875 None:intergenic 35.0%
TGGGAAATCTCTATTCATGA+AGG + chr2_1:69271010-69271029 Msa0220800:CDS 35.0%
GAAAAAAAAAGGGGAGAAAC+GGG + chr2_1:69271176-69271195 Msa0220800:CDS 35.0%
ATGCATGCATGACTTTAGAT+TGG - chr2_1:69271299-69271318 None:intergenic 35.0%
GAATGTTAAGTTTGGGTAAG+AGG + chr2_1:69271401-69271420 Msa0220800:intron 35.0%
!! GGTTTTCAAGACTGAGTAAT+TGG + chr2_1:69271512-69271531 Msa0220800:intron 35.0%
!! AGGTTTATTGATTTAGCCAC+TGG + chr2_1:69271796-69271815 Msa0220800:intron 35.0%
ATAACTGCAACTTATGCAAC+TGG - chr2_1:69271979-69271998 None:intergenic 35.0%
CATAAGTTGCAGTTATAAGC+TGG + chr2_1:69271983-69272002 Msa0220800:intron 35.0%
ATAAAAGAAGCTTGCAGTTC+TGG - chr2_1:69272332-69272351 None:intergenic 35.0%
! TTGAGTTGTAAACTGTCAAC+GGG - chr2_1:69272562-69272581 None:intergenic 35.0%
! GTTGAGTTGTAAACTGTCAA+CGG - chr2_1:69272563-69272582 None:intergenic 35.0%
TTGACAGTTTACAACTCAAC+AGG + chr2_1:69272563-69272582 Msa0220800:intron 35.0%
TGACAGTTTACAACTCAACA+GGG + chr2_1:69272564-69272583 Msa0220800:intron 35.0%
!! ATTCTGAAGCGTGTAGAAAA+AGG + chr2_1:69272959-69272978 Msa0220800:intron 35.0%
ACTAAGGTAGCAGTTTATGT+TGG + chr2_1:69273038-69273057 Msa0220800:intron 35.0%
!! TAGCAGTTTATGTTGGTTTG+AGG + chr2_1:69273045-69273064 Msa0220800:intron 35.0%
TGAGGTTATGAGATGGTTAT+TGG + chr2_1:69273063-69273082 Msa0220800:intron 35.0%
!! ATAAGGTTGGTGAAGCAATA+TGG + chr2_1:69273230-69273249 Msa0220800:CDS 35.0%
CAAATAGCTGAGAAGTTAGA+AGG + chr2_1:69273269-69273288 Msa0220800:intron 35.0%
! TGACTGAGGATCAAATTTTC+AGG + chr2_1:69273374-69273393 Msa0220800:intron 35.0%
AACTACACTTTGACTGTGTT+TGG + chr2_1:69273403-69273422 Msa0220800:intron 35.0%
!! ACACTTCTAGGATTGTTTGA+AGG - chr2_1:69273622-69273641 None:intergenic 35.0%
CAAACAATCCAATCCAAACA+TGG + chr2_1:69273661-69273680 Msa0220800:intron 35.0%
!! TCAGAAGATTTTGGTACTGA+AGG + chr2_1:69273866-69273885 Msa0220800:CDS 35.0%
TTCATATCTGTTCCATGTGT+AGG + chr2_1:69273962-69273981 Msa0220800:intron 35.0%
! ATTGTCAAAGTACCTACACA+TGG - chr2_1:69273977-69273996 None:intergenic 35.0%
! CTACTTATATTTAAGGTCGG+AGG - chr2_1:69274166-69274185 None:intergenic 35.0%
GCCTTATATTTGACCGAAAA+AGG - chr2_1:69274221-69274240 None:intergenic 35.0%
! TTTTCGGTCAAATATAAGGC+CGG + chr2_1:69274221-69274240 Msa0220800:intron 35.0%
!!! AAAGTCCAGGTTTTAAACTC+TGG - chr2_1:69274266-69274285 None:intergenic 35.0%
!! TGATTTTGAGAAGAAAGTCC+AGG - chr2_1:69274279-69274298 None:intergenic 35.0%
TCTTCTCAAAATCATTTGGG+TGG + chr2_1:69274285-69274304 Msa0220800:intron 35.0%
! TCAATTGCTTAATGGATGTC+AGG + chr2_1:69274396-69274415 Msa0220800:intron 35.0%
ACTACATCCTCGAGTTTAAT+CGG - chr2_1:69274445-69274464 None:intergenic 35.0%
! AAACTCGAGGATGTAGTTTT+AGG + chr2_1:69274448-69274467 Msa0220800:CDS 35.0%
TGATGACAAAACTGTACCAA+AGG + chr2_1:69274519-69274538 Msa0220800:CDS 35.0%
ATAGATAATGCAAGATGGGA+TGG + chr2_1:69274580-69274599 Msa0220800:CDS 35.0%
TAGATAATGCAAGATGGGAT+GGG + chr2_1:69274581-69274600 Msa0220800:CDS 35.0%
!!! TACCTTTTTTGATGAAGGCT+GGG + chr2_1:69274605-69274624 Msa0220800:intron 35.0%
TATTCCTTTCACTTACCTCT+TGG - chr2_1:69274644-69274663 None:intergenic 35.0%
TAGCAGATCGTGAAAATTTG+CGG + chr2_1:69274685-69274704 Msa0220800:intron 35.0%
!! TTGTGACATTGGTTTGATGT+TGG - chr2_1:69274836-69274855 None:intergenic 35.0%
GATCTCAGCTTAAAAGAGAT+GGG - chr2_1:69275123-69275142 None:intergenic 35.0%
TGATCTCAGCTTAAAAGAGA+TGG - chr2_1:69275124-69275143 None:intergenic 35.0%
! TCTCTTTTAAGCTGAGATCA+AGG + chr2_1:69275124-69275143 Msa0220800:intron 35.0%
! CTCTTTTAAGCTGAGATCAA+GGG + chr2_1:69275125-69275144 Msa0220800:intron 35.0%
ATGCCAGAATAAGTGTTTCT+TGG + chr2_1:69275167-69275186 Msa0220800:intron 35.0%
!! GTTTTGGTCATGTGACTATT+TGG + chr2_1:69275379-69275398 Msa0220800:intron 35.0%
!! TCATGTGACTATTTGGTGTA+AGG + chr2_1:69275386-69275405 Msa0220800:intron 35.0%
! TTGGTGTAAGGTTTTTCACT+TGG + chr2_1:69275398-69275417 Msa0220800:intron 35.0%
AATAGTAAGCTAACAGTGTG+AGG - chr2_1:69275541-69275560 None:intergenic 35.0%
CTTACTATTGCATGACAAAC+TGG + chr2_1:69275552-69275571 Msa0220800:CDS 35.0%
GATGTACAACAAAACACTCA+TGG - chr2_1:69275667-69275686 None:intergenic 35.0%
!! TGAGTGTTTTGTTGTACATC+AGG + chr2_1:69275667-69275686 Msa0220800:intron 35.0%
!!! GACATTTGTTTTGTTCCGTT+TGG + chr2_1:69275830-69275849 Msa0220800:intron 35.0%
!!! TTGTTGATTTTGGTTGAAGC+AGG + chr2_1:69275953-69275972 Msa0220800:intron 35.0%
!!! TGTTGATTTTGGTTGAAGCA+GGG + chr2_1:69275954-69275973 Msa0220800:intron 35.0%
TCTTAATAAGCAATCAGAGC+TGG + chr2_1:69276017-69276036 Msa0220800:intron 35.0%
!! TCGATGAAAGTATCCATATC+AGG - chr2_1:69276175-69276194 None:intergenic 35.0%
AAAAGGACCAAAGACATATC+AGG + chr2_1:69276225-69276244 Msa0220800:CDS 35.0%
TCAAACAAACCTCTATAGAG+TGG - chr2_1:69276271-69276290 None:intergenic 35.0%
! GGTAAGGCATTATAGATTCT+TGG - chr2_1:69276331-69276350 None:intergenic 35.0%
TAATACCTGCATGTGTCAAA+AGG - chr2_1:69276417-69276436 None:intergenic 35.0%
!!! GATAAGGTACACCCTTTTTT+CGG - chr2_1:69276557-69276576 None:intergenic 35.0%
GGGAACTTTGGTATAAGATA+AGG - chr2_1:69276573-69276592 None:intergenic 35.0%
! TCTTAAAGTATTCCGGGAAA+GGG - chr2_1:69276593-69276612 None:intergenic 35.0%
! TTCTTAAAGTATTCCGGGAA+AGG - chr2_1:69276594-69276613 None:intergenic 35.0%
! GCACATTCTTAAAGTATTCC+GGG - chr2_1:69276599-69276618 None:intergenic 35.0%
AAATTAATGTTGTGCCTGTC+AGG + chr2_1:69277388-69277407 Msa0220800:intron 35.0%
AATTAATGTTGTGCCTGTCA+GGG + chr2_1:69277389-69277408 Msa0220800:intron 35.0%
TTGAAGATCAATGCACTTGA+AGG + chr2_1:69277475-69277494 Msa0220800:intron 35.0%
TCTATAGCTGCAAATTGAAG+TGG - chr2_1:69277568-69277587 None:intergenic 35.0%
AGGCAACTTATAATTGCCTA+AGG - chr2_1:69277617-69277636 None:intergenic 35.0%
TGTGATCATCGTGTTATAGA+TGG + chr2_1:69277883-69277902 Msa0220800:intron 35.0%
!! TTATTTTGTTCAGTGGCGAT+TGG + chr2_1:69278392-69278411 Msa0220800:intron 35.0%
!! GAATGGTTGAAAGCATTCAA+AGG + chr2_1:69278419-69278438 Msa0220800:intron 35.0%
TTTCCAGTGATATTGTATGC+GGG + chr2_1:69278515-69278534 Msa0220800:intron 35.0%
TCCTCGTTTGCTTGTATAAA+GGG - chr2_1:69278662-69278681 None:intergenic 35.0%
ATCCTCGTTTGCTTGTATAA+AGG - chr2_1:69278663-69278682 None:intergenic 35.0%
TGTTGATCGAGTATGCATTT+CGG + chr2_1:69278753-69278772 Msa0220800:intron 35.0%
!!! TCTTTTTCAAGCTGAGATCA+AGG + chr2_1:69279043-69279062 Msa0220800:intron 35.0%
!!! CTTTTTCAAGCTGAGATCAA+GGG + chr2_1:69279044-69279063 Msa0220800:intron 35.0%
TGCCCCTAATAAGGGTAAAA+TGG - chr2_1:69270522-69270541 None:intergenic 40.0%
!!! TACCCTTATTAGGGGCATTT+TGG + chr2_1:69270525-69270544 Msa0220800:intron 40.0%
AGATGAGAGAGAAAATGAGG+GGG - chr2_1:69270613-69270632 None:intergenic 40.0%
GAGATGAGAGAGAAAATGAG+GGG - chr2_1:69270614-69270633 None:intergenic 40.0%
GAGAGATGAGAGAGAAAATG+AGG - chr2_1:69270616-69270635 None:intergenic 40.0%
!!! TTTTGGGGTTGAGAATGAGA+GGG - chr2_1:69270699-69270718 None:intergenic 40.0%
!!! ATTTTGGGGTTGAGAATGAG+AGG - chr2_1:69270700-69270719 None:intergenic 40.0%
! GGGTGAGGATTGTAGAATTT+TGG - chr2_1:69270716-69270735 None:intergenic 40.0%
AAAGTGATAGGAGAAGTTGC+TGG + chr2_1:69270987-69271006 Msa0220800:CDS 40.0%
!!! GTTTTGTTTTGGATTGTGGC+TGG + chr2_1:69271101-69271120 Msa0220800:intron 40.0%
CATGCATGCATAATTCTCTC+TGG + chr2_1:69271308-69271327 Msa0220800:intron 40.0%
AGGGAGAAGAGTAGAAGAAA+TGG + chr2_1:69271448-69271467 Msa0220800:intron 40.0%
CAAGACTGAGTAATTGGAGA+TGG + chr2_1:69271518-69271537 Msa0220800:intron 40.0%
AGTAATTGGAGATGGAAGCT+AGG + chr2_1:69271526-69271545 Msa0220800:intron 40.0%
AGATGGAAGCTAGGAACTTA+AGG + chr2_1:69271535-69271554 Msa0220800:intron 40.0%
AGATTATGCATGAGGGATGA+GGG - chr2_1:69271621-69271640 None:intergenic 40.0%
TAGATTATGCATGAGGGATG+AGG - chr2_1:69271622-69271641 None:intergenic 40.0%
TCACACGAAGACAATGCATT+TGG - chr2_1:69272159-69272178 None:intergenic 40.0%
CATTGTCTTCGTGTGAGTAT+TGG + chr2_1:69272163-69272182 Msa0220800:intron 40.0%
TGAGTTGTAAACTGTCAACG+GGG - chr2_1:69272561-69272580 None:intergenic 40.0%
CATGGATCCGGATATTATCT+TGG + chr2_1:69272759-69272778 Msa0220800:intron 40.0%
TTGAAGAATGAGCAGCATGA+AGG - chr2_1:69272843-69272862 None:intergenic 40.0%
GTGACAGGGAACATATCATT+AGG - chr2_1:69272871-69272890 None:intergenic 40.0%
TGAAGCGTGTAGAAAAAGGT+TGG + chr2_1:69272963-69272982 Msa0220800:intron 40.0%
GAAGCGTGTAGAAAAAGGTT+GGG + chr2_1:69272964-69272983 Msa0220800:intron 40.0%
AAGCGTGTAGAAAAAGGTTG+GGG + chr2_1:69272965-69272984 Msa0220800:intron 40.0%
!! GTTGGTTTGAGGTTATGAGA+TGG + chr2_1:69273056-69273075 Msa0220800:intron 40.0%
TAGCTGAGAAGTTAGAAGGA+AGG + chr2_1:69273273-69273292 Msa0220800:intron 40.0%
AGCTGAGAAGTTAGAAGGAA+GGG + chr2_1:69273274-69273293 Msa0220800:intron 40.0%
TGATCTTGTTAAAGCAGCTG+AGG - chr2_1:69273341-69273360 None:intergenic 40.0%
CTATCTTGGAAAAGAGCTTG+TGG + chr2_1:69273757-69273776 Msa0220800:CDS 40.0%
AATACTAGTCCTCTTTGCAC+TGG + chr2_1:69274038-69274057 Msa0220800:CDS 40.0%
ACTGGAAACTCCTGTTAGTT+TGG + chr2_1:69274056-69274075 Msa0220800:CDS 40.0%
! TCCTGTTAGTTTGGATGTAG+AGG + chr2_1:69274065-69274084 Msa0220800:CDS 40.0%
TCCTCTACATCCAAACTAAC+AGG - chr2_1:69274069-69274088 None:intergenic 40.0%
CTTCTAGCATATACATCCTC+CGG - chr2_1:69274243-69274262 None:intergenic 40.0%
! AGAAGCCAGAGTTTAAAACC+TGG + chr2_1:69274258-69274277 Msa0220800:intron 40.0%
TATGAGACCGATTAAACTCG+AGG + chr2_1:69274435-69274454 Msa0220800:CDS 40.0%
CTCTGGTGTGGTTCTTATAT+TGG - chr2_1:69274474-69274493 None:intergenic 40.0%
CAATATAAGAACCACACCAG+AGG + chr2_1:69274472-69274491 Msa0220800:CDS 40.0%
! GTTTTGTCATCAATGTAGGC+TGG - chr2_1:69274511-69274530 None:intergenic 40.0%
AGATAATGCAAGATGGGATG+GGG + chr2_1:69274582-69274601 Msa0220800:CDS 40.0%
!!! TGGGGTACCTTTTTTGATGA+AGG + chr2_1:69274600-69274619 Msa0220800:intron 40.0%
!!! GTACCTTTTTTGATGAAGGC+TGG + chr2_1:69274604-69274623 Msa0220800:intron 40.0%
TTCCCAGCCTTCATCAAAAA+AGG - chr2_1:69274610-69274629 None:intergenic 40.0%
AAAATAGGGGCTAATGACCA+TGG - chr2_1:69275350-69275369 None:intergenic 40.0%
ACTATTGCATGACAAACTGG+TGG + chr2_1:69275555-69275574 Msa0220800:CDS 40.0%
! TTTGTTGTACATCAGGTGAC+TGG + chr2_1:69275674-69275693 Msa0220800:intron 40.0%
ATCAGGTGACTGGTATATAC+AGG + chr2_1:69275684-69275703 Msa0220800:intron 40.0%
TCAGGTGACTGGTATATACA+GGG + chr2_1:69275685-69275704 Msa0220800:intron 40.0%
ATACAGGGCTATGAATGTCA+AGG + chr2_1:69275700-69275719 Msa0220800:intron 40.0%
GACTTAACAGTTCTCTGAGT+TGG - chr2_1:69275731-69275750 None:intergenic 40.0%
!!! GTTGATTTTGGTTGAAGCAG+GGG + chr2_1:69275955-69275974 Msa0220800:intron 40.0%
!!! TTGATTTTGGTTGAAGCAGG+GGG + chr2_1:69275956-69275975 Msa0220800:intron 40.0%
! TTTTACGCTCCACTCTATAG+AGG + chr2_1:69276259-69276278 Msa0220800:intron 40.0%
AACCTTTCTTCCCCTTATAG+AGG - chr2_1:69276370-69276389 None:intergenic 40.0%
! ACAATCCTTTTGACACATGC+AGG + chr2_1:69276409-69276428 Msa0220800:intron 40.0%
TATACCAAAGTTCCCTTTCC+CGG + chr2_1:69276578-69276597 Msa0220800:intron 40.0%
ATTGGTTGAGATCTGACAGA+AGG + chr2_1:69276834-69276853 Msa0220800:CDS 40.0%
TTGGTTGAGATCTGACAGAA+GGG + chr2_1:69276835-69276854 Msa0220800:CDS 40.0%
! AGCATTATGCAGGTTGACTT+TGG + chr2_1:69276884-69276903 Msa0220800:intron 40.0%
TTGCAGAAATATGCAGCACA+GGG + chr2_1:69277008-69277027 Msa0220800:intron 40.0%
! GACTCTGCCATATCTAAAGT+AGG + chr2_1:69277103-69277122 Msa0220800:intron 40.0%
TCAAAGTTCTCAAGTGGCAA+CGG + chr2_1:69277271-69277290 Msa0220800:intron 40.0%
TCGGTGTGCAAAACAAAGTT+GGG - chr2_1:69277432-69277451 None:intergenic 40.0%
TTGTTGCTAATCTTCCACCT+CGG - chr2_1:69277451-69277470 None:intergenic 40.0%
ATAACACGATGATCACAGCT+GGG - chr2_1:69277880-69277899 None:intergenic 40.0%
TATAACACGATGATCACAGC+TGG - chr2_1:69277881-69277900 None:intergenic 40.0%
CAAGAGAGAAGCTAATATGC+AGG + chr2_1:69278210-69278229 Msa0220800:intron 40.0%
TGTTAGTATGTTTCTCTGCG+CGG - chr2_1:69278363-69278382 None:intergenic 40.0%
GGATGTAAGATTTGATCACC+TGG + chr2_1:69278536-69278555 Msa0220800:intron 40.0%
TCACCTGGTATTTACCCATT+TGG + chr2_1:69278551-69278570 Msa0220800:intron 40.0%
CAACCAAATGGGTAAATACC+AGG - chr2_1:69278557-69278576 None:intergenic 40.0%
ATGCATACTCGATCAACACA+AGG - chr2_1:69278751-69278770 None:intergenic 40.0%
AACAAACGCTAACAGTGTCG+AGG + chr2_1:69270434-69270453 Msa0220800:intron 45.0%
! ATTTTCATGGGGTTTGGGTG+AGG - chr2_1:69270731-69270750 None:intergenic 45.0%
CAGAACTGGAAGAGGAGAAA+AGG - chr2_1:69270814-69270833 None:intergenic 45.0%
AGTTTGGACAGAACTGGAAG+AGG - chr2_1:69270822-69270841 None:intergenic 45.0%
AAGATCGAAGGATGGGGTTA+GGG - chr2_1:69270848-69270867 None:intergenic 45.0%
AAAGATCGAAGGATGGGGTT+AGG - chr2_1:69270849-69270868 None:intergenic 45.0%
TGATAGGAGAAGTTGCTGGT+GGG + chr2_1:69270991-69271010 Msa0220800:CDS 45.0%
AAAAAGGGGAGAAACGGGAA+CGG + chr2_1:69271181-69271200 Msa0220800:CDS 45.0%
TCTCTCTTACTCTTCCTCAC+CGG - chr2_1:69271265-69271284 None:intergenic 45.0%
GAGGAAGAGTAAGAGAGAGA+CGG + chr2_1:69271267-69271286 Msa0220800:intron 45.0%
GCAGAAAATAGCTTCAGTGC+AGG + chr2_1:69271914-69271933 Msa0220800:intron 45.0%
! AAAGAAGCTTGCAGTTCTGG+AGG - chr2_1:69272329-69272348 None:intergenic 45.0%
!!! CGGGGTGGATTGCTTTTTTT+CGG - chr2_1:69272543-69272562 None:intergenic 45.0%
TGCAATGAGTTCTGCGTCTA+TGG + chr2_1:69272792-69272811 Msa0220800:intron 45.0%
GAATGAGCAGCATGAAGGAA+TGG - chr2_1:69272838-69272857 None:intergenic 45.0%
! CTGTTACTTGACAGGGATGT+TGG + chr2_1:69272917-69272936 Msa0220800:intron 45.0%
GTAGAAAAAGGTTGGGGTCA+AGG + chr2_1:69272971-69272990 Msa0220800:intron 45.0%
GAGAAGTTAGAAGGAAGGGT+TGG + chr2_1:69273278-69273297 Msa0220800:intron 45.0%
ATTCAAGCGGTATCTGACTG+AGG + chr2_1:69273360-69273379 Msa0220800:intron 45.0%
GGATTGTTTGAAGGAGCTCA+AGG - chr2_1:69273613-69273632 None:intergenic 45.0%
CCACTGCCATAAACACTTCT+AGG - chr2_1:69273634-69273653 None:intergenic 45.0%
!! CCTAGAAGTGTTTATGGCAG+TGG + chr2_1:69273631-69273650 Msa0220800:intron 45.0%
! TTTTTGACCCTTTGTGGTCG+AGG + chr2_1:69273813-69273832 Msa0220800:CDS 45.0%
TGTATTGCCTCGACCACAAA+GGG - chr2_1:69273823-69273842 None:intergenic 45.0%
ATGTATTGCCTCGACCACAA+AGG - chr2_1:69273824-69273843 None:intergenic 45.0%
!! GATTTTGGTACTGAAGGACG+TGG + chr2_1:69273872-69273891 Msa0220800:CDS 45.0%
! GCTTAATGGATGTCAGGTCA+AGG + chr2_1:69274402-69274421 Msa0220800:intron 45.0%
TATAAGAACCACACCAGAGG+AGG + chr2_1:69274475-69274494 Msa0220800:CDS 45.0%
!! GGAAAGCATTACACACCAAG+AGG + chr2_1:69274626-69274645 Msa0220800:intron 45.0%
CACACCAAGAGGTAAGTGAA+AGG + chr2_1:69274637-69274656 Msa0220800:intron 45.0%
! GATAAGTTGGATGATGGCCA+TGG + chr2_1:69275330-69275349 Msa0220800:intron 45.0%
! CATGACAAACTGGTGGATAC+TGG + chr2_1:69275562-69275581 Msa0220800:CDS 45.0%
AGGGCTATGAATGTCAAGGT+GGG + chr2_1:69275704-69275723 Msa0220800:intron 45.0%
TCCGTTTGGCCCTTAAAAGT+TGG + chr2_1:69275844-69275863 Msa0220800:intron 45.0%
!! GCCAACTTTTAAGGGCCAAA+CGG - chr2_1:69275848-69275867 None:intergenic 45.0%
!!! GAGCATGGGGTTGTTGATTT+TGG + chr2_1:69275943-69275962 Msa0220800:intron 45.0%
AGTCTGGCTGATACCTGATA+TGG + chr2_1:69276159-69276178 Msa0220800:intron 45.0%
CATCGCACCTGATATGTCTT+TGG - chr2_1:69276235-69276254 None:intergenic 45.0%
CTTATAGAGGTGGCTAGGAA+GGG - chr2_1:69276357-69276376 None:intergenic 45.0%
CTTCCTAGCCACCTCTATAA+GGG + chr2_1:69276356-69276375 Msa0220800:intron 45.0%
TTCCTAGCCACCTCTATAAG+GGG + chr2_1:69276357-69276376 Msa0220800:intron 45.0%
CTTTCTTCCCCTTATAGAGG+TGG - chr2_1:69276367-69276386 None:intergenic 45.0%
CACCTCTATAAGGGGAAGAA+AGG + chr2_1:69276365-69276384 Msa0220800:intron 45.0%
TATTCCGGGAAAGGGAACTT+TGG - chr2_1:69276585-69276604 None:intergenic 45.0%
TGCAAATGGTTGCTGCAGAT+TGG + chr2_1:69276816-69276835 Msa0220800:CDS 45.0%
GACAGAAGGGAAGATGATCT+TGG + chr2_1:69276848-69276867 Msa0220800:CDS 45.0%
AGAAGGGAAGATGATCTTGG+TGG + chr2_1:69276851-69276870 Msa0220800:CDS 45.0%
!!! GCAGGTTGACTTTGGTGTTT+TGG + chr2_1:69276892-69276911 Msa0220800:intron 45.0%
CTTGCAGAAATATGCAGCAC+AGG + chr2_1:69277007-69277026 Msa0220800:intron 45.0%
AGAAATATGCAGCACAGGGT+GGG + chr2_1:69277012-69277031 Msa0220800:intron 45.0%
GCCTGTCAGGGATATAACTA+TGG + chr2_1:69277401-69277420 Msa0220800:intron 45.0%
GCCATAGTTATATCCCTGAC+AGG - chr2_1:69277405-69277424 None:intergenic 45.0%
! CTCGGTGTGCAAAACAAAGT+TGG - chr2_1:69277433-69277452 None:intergenic 45.0%
!!! CAACTTTGTTTTGCACACCG+AGG + chr2_1:69277431-69277450 Msa0220800:intron 45.0%
TAACACGATGATCACAGCTG+GGG - chr2_1:69277879-69277898 None:intergenic 45.0%
TCTCTTGCATGCATGAGAGT+TGG - chr2_1:69278197-69278216 None:intergenic 45.0%
CATCCCGCATACAATATCAC+TGG - chr2_1:69278521-69278540 None:intergenic 45.0%
GCCCTTTATACAAGCAAACG+AGG + chr2_1:69278658-69278677 Msa0220800:intron 45.0%
!!! TTTTATTAATATGTTTTATT+TGG + chr2_1:69273186-69273205 Msa0220800:intron 5.0%
!! AATATAAAAAAAAAATTGTT+TGG + chr2_1:69277749-69277768 Msa0220800:intron 5.0%
TTCCTCCCTCTCTTCTCTCA+CGG + chr2_1:69270641-69270660 Msa0220800:intron 50.0%
GGAAACCGTGAGAGAAGAGA+GGG - chr2_1:69270649-69270668 None:intergenic 50.0%
TGGAAACCGTGAGAGAAGAG+AGG - chr2_1:69270650-69270669 None:intergenic 50.0%
AGAGAGAGATGGGAGGAAGA+AGG - chr2_1:69270673-69270692 None:intergenic 50.0%
TCTTCCTCCCATCTCTCTCT+CGG + chr2_1:69270673-69270692 Msa0220800:intron 50.0%
GGGTTCAGTTTGGACAGAAC+TGG - chr2_1:69270828-69270847 None:intergenic 50.0%
GATGGGGTTAGGGTTCAGTT+TGG - chr2_1:69270838-69270857 None:intergenic 50.0%
GTGATAGGAGAAGTTGCTGG+TGG + chr2_1:69270990-69271009 Msa0220800:CDS 50.0%
AAAAGGGGAGAAACGGGAAC+GGG + chr2_1:69271182-69271201 Msa0220800:CDS 50.0%
AAGAAGAACGGGAACGGGAA+AGG + chr2_1:69271208-69271227 Msa0220800:CDS 50.0%
AGAAGAACGGGAACGGGAAA+GGG + chr2_1:69271209-69271228 Msa0220800:CDS 50.0%
! GTTTTTCGCCGCAGTTGTGA+CGG - chr2_1:69271235-69271254 None:intergenic 50.0%
ACAACTGCGGCGAAAAACAG+CGG + chr2_1:69271237-69271256 Msa0220800:CDS 50.0%
GTTTGGGTAAGAGGGATCTG+AGG + chr2_1:69271410-69271429 Msa0220800:intron 50.0%
TGCATGAGGGATGAGGGAAA+GGG - chr2_1:69271615-69271634 None:intergenic 50.0%
ATGCATGAGGGATGAGGGAA+AGG - chr2_1:69271616-69271635 None:intergenic 50.0%
!! GGTTTTATGGACTGCTGTGC+TGG + chr2_1:69272062-69272081 Msa0220800:intron 50.0%
! ATGGACTGCTGTGCTGGAAT+TGG + chr2_1:69272068-69272087 Msa0220800:intron 50.0%
GTTGTAAACTGTCAACGGGG+TGG - chr2_1:69272558-69272577 None:intergenic 50.0%
CAGGAGTTTCCAGTGCAAAG+AGG - chr2_1:69274050-69274069 None:intergenic 50.0%
TCGGTCAAATATAAGGCCGG+AGG + chr2_1:69274224-69274243 Msa0220800:intron 50.0%
TACGCCTCAGCTCATGGTTA+TGG + chr2_1:69274328-69274347 Msa0220800:intron 50.0%
AGGTCCATAACCATGAGCTG+AGG - chr2_1:69274335-69274354 None:intergenic 50.0%
TGGATATGCAACACCTCCTC+TGG - chr2_1:69274491-69274510 None:intergenic 50.0%
GTCTGGGTTAAGCTGTCCTT+TGG - chr2_1:69274538-69274557 None:intergenic 50.0%
CTTAACCCAGACATTTGCCG+CGG + chr2_1:69274546-69274565 Msa0220800:CDS 50.0%
ACACCTGACGAGATACCTGA+GGG + chr2_1:69275508-69275527 Msa0220800:CDS 50.0%
AAAGCCAGGTGACAGAGTTG+AGG + chr2_1:69275585-69275604 Msa0220800:CDS 50.0%
CAGGGCTATGAATGTCAAGG+TGG + chr2_1:69275703-69275722 Msa0220800:intron 50.0%
GGGGATCAGTCAACAGAAAG+AGG + chr2_1:69275975-69275994 Msa0220800:intron 50.0%
TGGCTAGGAAGGGATAGGTA+AGG - chr2_1:69276347-69276366 None:intergenic 50.0%
CCTTATAGAGGTGGCTAGGA+AGG - chr2_1:69276358-69276377 None:intergenic 50.0%
CCTTCCTAGCCACCTCTATA+AGG + chr2_1:69276355-69276374 Msa0220800:intron 50.0%
TTCCCCTTATAGAGGTGGCT+AGG - chr2_1:69276362-69276381 None:intergenic 50.0%
TCAACCTGCATAATGCTCCC+AGG - chr2_1:69276881-69276900 None:intergenic 50.0%
CAGAAATATGCAGCACAGGG+TGG + chr2_1:69277011-69277030 Msa0220800:intron 50.0%
!!! CTTTGTTTTGCACACCGAGG+TGG + chr2_1:69277434-69277453 Msa0220800:intron 50.0%
AACACGATGATCACAGCTGG+GGG - chr2_1:69277878-69277897 None:intergenic 50.0%
AACCGTGAGAGAAGAGAGGG+AGG - chr2_1:69270646-69270665 None:intergenic 55.0%
GAGAGATGGGAGGAAGAAGG+TGG - chr2_1:69270670-69270689 None:intergenic 55.0%
GGGAACGGGAGGAAGAAGAA+CGG + chr2_1:69271196-69271215 Msa0220800:CDS 55.0%
GGAACGGGAGGAAGAAGAAC+GGG + chr2_1:69271197-69271216 Msa0220800:CDS 55.0%
GGGAGGAAGAAGAACGGGAA+CGG + chr2_1:69271202-69271221 Msa0220800:CDS 55.0%
GGAGGAAGAAGAACGGGAAC+GGG + chr2_1:69271203-69271222 Msa0220800:CDS 55.0%
!! ATGGTGATGGCAGCAAGCTC+TGG - chr2_1:69271572-69271591 None:intergenic 55.0%
GCAAGCAGTGTAGAGAGCGA+TGG + chr2_1:69273300-69273319 Msa0220800:intron 55.0%
! TTGGTACTGAAGGACGTGGC+AGG + chr2_1:69273876-69273895 Msa0220800:CDS 55.0%
TTGAGCTACGCCTCAGCTCA+TGG + chr2_1:69274322-69274341 Msa0220800:intron 55.0%
ATGCAACACCTCCTCTGGTG+TGG - chr2_1:69274486-69274505 None:intergenic 55.0%
ATCTATGAAGTGGGCAGCCG+CGG - chr2_1:69274566-69274585 None:intergenic 55.0%
GACACCTGACGAGATACCTG+AGG + chr2_1:69275507-69275526 Msa0220800:CDS 55.0%
! CTGGTGGATACTGGAAAGCC+AGG + chr2_1:69275571-69275590 Msa0220800:CDS 55.0%
CTCACCTCAACTCTGTCACC+TGG - chr2_1:69275592-69275611 None:intergenic 55.0%
AGAGGTGGCTAGGAAGGGAT+AGG - chr2_1:69276352-69276371 None:intergenic 55.0%
CTGGCTCCGTGAGTACAAAG+AGG - chr2_1:69276441-69276460 None:intergenic 55.0%
GAGCCAGTCGTCTAGGTCAA+GGG + chr2_1:69276454-69276473 Msa0220800:intron 55.0%
AGCCAGTCGTCTAGGTCAAG+GGG + chr2_1:69276455-69276474 Msa0220800:intron 55.0%
! ATGATCTTGGTGGCCGTCCT+GGG + chr2_1:69276861-69276880 Msa0220800:CDS 55.0%
CCTGCATAATGCTCCCAGGA+CGG - chr2_1:69276877-69276896 None:intergenic 55.0%
ATGATCACAGCTGGGGGACA+CGG - chr2_1:69277872-69277891 None:intergenic 55.0%
! CTCTGCGCGGATCACCATTT+TGG - chr2_1:69278350-69278369 None:intergenic 55.0%
!! CAGTGGCGATTGGTGTCGAA+TGG + chr2_1:69278402-69278421 Msa0220800:intron 55.0%
GAGAGGGCCGAGAGAGAGAT+GGG - chr2_1:69270683-69270702 None:intergenic 60.0%
TGAGAGGGCCGAGAGAGAGA+TGG - chr2_1:69270684-69270703 None:intergenic 60.0%
GGAAAGGGCCGTCACAACTG+CGG + chr2_1:69271224-69271243 Msa0220800:CDS 60.0%
! GGGATCTGAGGTCGAGAGTG+AGG + chr2_1:69271422-69271441 Msa0220800:intron 60.0%
TGAGGTCGAGAGTGAGGCAG+AGG + chr2_1:69271428-69271447 Msa0220800:intron 60.0%
GAGGTCGAGAGTGAGGCAGA+GGG + chr2_1:69271429-69271448 Msa0220800:intron 60.0%
GAGCTGAGGCGTAGCTCAAG+TGG - chr2_1:69274321-69274340 None:intergenic 60.0%
CCTCCCTCAGGTATCTCGTC+AGG - chr2_1:69275514-69275533 None:intergenic 60.0%
CCTGACGAGATACCTGAGGG+AGG + chr2_1:69275511-69275530 Msa0220800:CDS 60.0%
ACTCACGGAGCCAGTCGTCT+AGG + chr2_1:69276447-69276466 Msa0220800:intron 60.0%
GGAGCCAGTCGTCTAGGTCA+AGG + chr2_1:69276453-69276472 Msa0220800:intron 60.0%
AGCCCCTTGACCTAGACGAC+TGG - chr2_1:69276460-69276479 None:intergenic 60.0%
! GATGATCTTGGTGGCCGTCC+TGG + chr2_1:69276860-69276879 Msa0220800:CDS 60.0%
!! CCGTCCTGGGAGCATTATGC+AGG + chr2_1:69276874-69276893 Msa0220800:CDS 60.0%
AGGGCCGAGAGAGAGATGGG+AGG - chr2_1:69270680-69270699 None:intergenic 65.0%
AGGGGAGAAACGGGAACGGG+AGG + chr2_1:69271185-69271204 Msa0220800:CDS 65.0%
!! GAAAAACAGCGGCGCCGGTG+AGG + chr2_1:69271248-69271267 Msa0220800:CDS 65.0%
GGCAGCCGCGGCAAATGTCT+GGG - chr2_1:69274554-69274573 None:intergenic 65.0%
! GTGTGAGGCGTTCCTCCCTC+AGG - chr2_1:69275526-69275545 None:intergenic 65.0%
GCGGCGAAAAACAGCGGCGC+CGG + chr2_1:69271243-69271262 Msa0220800:CDS 70.0%
GGGCAGCCGCGGCAAATGTC+TGG - chr2_1:69274555-69274574 None:intergenic 70.0%
GCTGGGGGACACGGCCATGA+AGG - chr2_1:69277863-69277882 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 69270402 69279071 69270402 ID=Msa0220800;Name=Msa0220800
chr2_1 mRNA 69270402 69279071 69270402 ID=Msa0220800-mRNA-1;Parent=Msa0220800;Name=Msa0220800-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.23|0.07|0.78|0.53|0.57|14|0|375
chr2_1 exon 69270402 69270406 69270402 ID=Msa0220800-mRNA-1:exon:19605;Parent=Msa0220800-mRNA-1
chr2_1 exon 69270983 69271039 69270983 ID=Msa0220800-mRNA-1:exon:19606;Parent=Msa0220800-mRNA-1
chr2_1 exon 69271173 69271274 69271173 ID=Msa0220800-mRNA-1:exon:19607;Parent=Msa0220800-mRNA-1
chr2_1 exon 69273223 69273282 69273223 ID=Msa0220800-mRNA-1:exon:19608;Parent=Msa0220800-mRNA-1
chr2_1 exon 69273748 69273897 69273748 ID=Msa0220800-mRNA-1:exon:19609;Parent=Msa0220800-mRNA-1
chr2_1 exon 69273984 69274104 69273984 ID=Msa0220800-mRNA-1:exon:19610;Parent=Msa0220800-mRNA-1
chr2_1 exon 69274418 69274603 69274418 ID=Msa0220800-mRNA-1:exon:19611;Parent=Msa0220800-mRNA-1
chr2_1 exon 69275505 69275606 69275505 ID=Msa0220800-mRNA-1:exon:19612;Parent=Msa0220800-mRNA-1
chr2_1 exon 69275689 69275695 69275689 ID=Msa0220800-mRNA-1:exon:19613;Parent=Msa0220800-mRNA-1
chr2_1 exon 69276161 69276246 69276161 ID=Msa0220800-mRNA-1:exon:19614;Parent=Msa0220800-mRNA-1
chr2_1 exon 69276776 69276895 69276776 ID=Msa0220800-mRNA-1:exon:19615;Parent=Msa0220800-mRNA-1
chr2_1 exon 69277014 69277120 69277014 ID=Msa0220800-mRNA-1:exon:19616;Parent=Msa0220800-mRNA-1
chr2_1 exon 69278522 69278528 69278522 ID=Msa0220800-mRNA-1:exon:19617;Parent=Msa0220800-mRNA-1
chr2_1 exon 69279054 69279071 69279054 ID=Msa0220800-mRNA-1:exon:19618;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69270402 69270406 69270402 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69270983 69271039 69270983 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69271173 69271274 69271173 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69273223 69273282 69273223 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69273748 69273897 69273748 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69273984 69274104 69273984 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69274418 69274603 69274418 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69275505 69275606 69275505 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69275689 69275695 69275689 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69276161 69276246 69276161 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69276776 69276895 69276776 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69277014 69277120 69277014 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69278522 69278528 69278522 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
chr2_1 CDS 69279054 69279071 69279054 ID=Msa0220800-mRNA-1:cds;Parent=Msa0220800-mRNA-1
Gene Sequence

>Msa0220800

ATGAAAAGTAAAGTGATAGGAGAAGTTGCTGGTGGGAAATCTCTATTCATGAAGGATGAGTTAAAGAAAAAAAAAGGGGAGAAACGGGAACGGGAGGAAGAAGAACGGGAACGGGAAAGGGCCGTCACAACTGCGGCGAAAAACAGCGGCGCCGGTGAGGAAGAGAAACTGATAAGGTTGGTGAAGCAATATGGTGAAAGAAAATGGGCTCAAATAGCTGAGAAAATCGATCACTATCTTGGAAAAGAGCTTGTGGAAAATCTTTTTGTTCTCCGATTCTCAAATCTAATTTTTGACCCTTTGTGGTCGAGGCAATACATAAGAAATGTACAGTTGATATTCTCAGAAGATTTTGGTACTGAAGGACGTGGCAGGTACTTTGACAATTATGGTATAATTAGAGATATTATGCAGAATCATCTACTTCAAATACTAGTCCTCTTTGCACTGGAAACTCCTGTTAGTTTGGATGTAGAGGACATTAGAAATGAAAAGGTCAAGGTTCTTCGTTCTATGAGACCGATTAAACTCGAGGATGTAGTTTTAGGCCAATATAAGAACCACACCAGAGGAGGTGTTGCATATCCAGCCTACATTGATGACAAAACTGTACCAAAGGACAGCTTAACCCAGACATTTGCCGCGGCTGCCCACTTCATAGATAATGCAAGATGGGATGGGGAGACACCTGACGAGATACCTGAGGGAGGAACGCCTCACACTGTTAGCTTACTATTGCATGACAAACTGGTGGATACTGGAAAGCCAGGTGACAGAGTTGAGGTGACTGTCTGGCTGATACCTGATATGGATACTTTCATCGAAAATTTAAACAGCGTTGGTTATCTACTCAAAAAAGGACCAAAGACATATCAGTTAGAGTTTGAATCCTTAACCACTTATCTATTTGCTTTTATGCAAATGGTTGCTGCAGATTGGTTGAGATCTGACAGAAGGGAAGATGATCTTGGTGGCCGTCCTGGGAGCATTATGCAGAAATATGCAGCACAGGGTGGGCCTGAGTTTTTCATTGTAAACATCTGTGGTGTTGTTCTCCCTTTGAATCCTTCTTTTCTTAAGATCATGACTCTGCCATATCTAAATGATATTCTGAGATCAAGGGAATAA

Protein sequence

>Msa0220800

MKSKVIGEVAGGKSLFMKDELKKKKGEKREREEEERERERAVTTAAKNSGAGEEEKLIRLVKQYGERKWAQIAEKIDHYLGKELVENLFVLRFSNLIFDPLWSRQYIRNVQLIFSEDFGTEGRGRYFDNYGIIRDIMQNHLLQILVLFALETPVSLDVEDIRNEKVKVLRSMRPIKLEDVVLGQYKNHTRGGVAYPAYIDDKTVPKDSLTQTFAAAAHFIDNARWDGETPDEIPEGGTPHTVSLLLHDKLVDTGKPGDRVEVTVWLIPDMDTFIENLNSVGYLLKKGPKTYQLEFESLTTYLFAFMQMVAADWLRSDRREDDLGGRPGSIMQKYAAQGGPEFFIVNICGVVLPLNPSFLKIMTLPYLNDILRSRE*