Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155150 | XP_003597260.2 | 95.349 | 43 | 1 | 1 | 1 | 42 | 540 | 582 | 1.57e-17 | 86.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155150 | G7IRU5 | 95.349 | 43 | 1 | 1 | 1 | 42 | 540 | 582 | 7.48e-18 | 86.7 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0771800 | Msa1155150 | 0.924635 | 5.412290e-90 | -8.615850e-47 |
Msa0220800 | Msa1155150 | 0.806299 | 8.798413e-50 | -8.615850e-47 |
Msa1096620 | Msa1155150 | 0.921744 | 2.412423e-88 | -8.615850e-47 |
Msa1098140 | Msa1155150 | 0.872649 | 2.703919e-67 | -8.615850e-47 |
Msa0276460 | Msa1155150 | 0.931019 | 6.999825e-94 | -8.615850e-47 |
Msa0327780 | Msa1155150 | 0.875385 | 3.212009e-68 | -8.615850e-47 |
Msa1155150 | Msa1227510 | 0.905666 | 3.372230e-80 | -8.615850e-47 |
Msa1155150 | Msa1332970 | 0.877140 | 7.975823e-69 | -8.615850e-47 |
Msa0483120 | Msa1155150 | 0.886431 | 3.439824e-72 | -8.615850e-47 |
Msa0852720 | Msa1155150 | 0.817101 | 3.926220e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155150 | MtrunA17_Chr2g0326781 | 95.349 | 43 | 1 | 1 | 1 | 42 | 540 | 582 | 1.44e-21 | 86.7 |
Msa1155150 | MtrunA17_Chr1g0199661 | 48.101 | 79 | 36 | 3 | 1 | 79 | 512 | 585 | 3.62e-15 | 68.6 |
Msa1155150 | MtrunA17_Chr8g0388331 | 93.548 | 31 | 2 | 0 | 50 | 80 | 180 | 210 | 1.61e-14 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155150 | AT2G28320.1 | 81.395 | 43 | 7 | 1 | 1 | 42 | 550 | 592 | 5.84e-18 | 76.6 |
Msa1155150 | AT3G54800.2 | 69.767 | 43 | 12 | 1 | 1 | 42 | 547 | 589 | 9.73e-15 | 67.8 |
Msa1155150 | AT3G54800.1 | 69.767 | 43 | 12 | 1 | 1 | 42 | 547 | 589 | 9.73e-15 | 67.8 |
Find 180 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCCACCTTTAATTCTTTA+TGG | 0.142489 | 7_4:+43002007 | None:intergenic |
GGGTGAGGATTGTAGAATTT+TGG | 0.185252 | 7_4:+43002835 | None:intergenic |
CTGTATTGTGAAATCTTTAA+AGG | 0.194309 | 7_4:-42997100 | Msa1155150:five_prime_UTR |
AGAGTAGAAGAAATGGAATT+AGG | 0.203623 | 7_4:-43002143 | Msa1155150:five_prime_UTR |
CTCTGGTGTGGTTCTTATAT+TGG | 0.220904 | 7_4:+42999340 | None:intergenic |
AGCAATATGGTGAAAGAAAA+TGG | 0.245087 | 7_4:-43000569 | Msa1155150:five_prime_UTR |
AGCACATTCTTAAAGTATTC+CGG | 0.250747 | 7_4:+42997214 | None:intergenic |
ATAAAAGAAGCTTGCAGTTC+TGG | 0.264689 | 7_4:+43001266 | None:intergenic |
GGGCAGCCGCGGCAAATGTC+TGG | 0.287615 | 7_4:+42999259 | None:intergenic |
CCATCACCATAAAGAATTAA+AGG | 0.295001 | 7_4:-43002013 | Msa1155150:intron |
AAAGATTGAAGGATGGGGTT+AGG | 0.296600 | 7_4:+43002702 | None:intergenic |
TGTGAGAAGAATGTTAAGTT+TGG | 0.298831 | 7_4:-43002205 | Msa1155150:five_prime_UTR |
GAGTAGAAGAAATGGAATTA+GGG | 0.301865 | 7_4:-43002142 | Msa1155150:five_prime_UTR |
TATACCAAAGTTCCCTTTCC+CGG | 0.312780 | 7_4:-42997233 | Msa1155150:five_prime_UTR |
GAATGTTAAGTTTGGGTAAG+AGG | 0.323759 | 7_4:-43002197 | Msa1155150:five_prime_UTR |
TTTATTGCAGCAGTTGATAA+AGG | 0.324523 | 7_4:-43001248 | Msa1155150:five_prime_UTR |
TAAACAAATTATGAGGCTTC+AGG | 0.348456 | 7_4:-42998328 | Msa1155150:five_prime_UTR |
TGCCAACATAGTGAATAAAA+AGG | 0.349046 | 7_4:-43001211 | Msa1155150:intron |
CTTACTATTGCATGACAAAC+TGG | 0.357680 | 7_4:-42998259 | Msa1155150:five_prime_UTR |
AGGGAGAAGAGTAGAAGAAA+TGG | 0.359832 | 7_4:-43002150 | Msa1155150:five_prime_UTR |
GATGATCTTGGTGGCCGTCC+TGG | 0.359921 | 7_4:-42996956 | Msa1155150:CDS |
AGCAAATAGATAAGTGGTTA+AGG | 0.372183 | 7_4:+42997027 | None:intergenic |
ATTCTGAAGCGTGTAGAAAA+AGG | 0.373678 | 7_4:-43000853 | Msa1155150:five_prime_UTR |
GGAGGAAGAAGAACGGGAAC+GGG | 0.374447 | 7_4:-43002395 | Msa1155150:five_prime_UTR |
TCGATGAAAGTATCCATATC+AGG | 0.376038 | 7_4:+42997639 | None:intergenic |
GTGAGAAGAATGTTAAGTTT+GGG | 0.387565 | 7_4:-43002204 | Msa1155150:five_prime_UTR |
AGTCTGGCTGATACCTGATA+TGG | 0.388600 | 7_4:-42997652 | Msa1155150:five_prime_UTR |
CAAATAGCTGAGAAGTTAGA+AGG | 0.389483 | 7_4:-43000543 | Msa1155150:five_prime_UTR |
GCACATTCTTAAAGTATTCC+GGG | 0.394693 | 7_4:+42997215 | None:intergenic |
CATCGCACCTGATATGTCTT+TGG | 0.395784 | 7_4:+42997579 | None:intergenic |
AGAAGAACGGGAACGGGAAA+GGG | 0.396624 | 7_4:-43002389 | Msa1155150:five_prime_UTR |
CATGACAAACTGGTGGATAC+TGG | 0.399287 | 7_4:-42998249 | Msa1155150:five_prime_UTR |
AAGATTGAAGGATGGGGTTA+GGG | 0.404052 | 7_4:+43002703 | None:intergenic |
ATGCATGCATGACTTTAGAT+TGG | 0.411318 | 7_4:+43002302 | None:intergenic |
ACTACATCCTCGAGTTTAAT+CGG | 0.412521 | 7_4:+42999369 | None:intergenic |
AAAGAAACCTACTTTAGATA+TGG | 0.414269 | 7_4:+42996706 | None:intergenic |
GATGGGGTTAGGGTTCAGTT+TGG | 0.416945 | 7_4:+43002713 | None:intergenic |
CTTTGCCTAATTAAAATCAA+TGG | 0.418036 | 7_4:-42996181 | Msa1155150:three_prime_UTR |
ATGGTGATGGCAGCAAGCTC+TGG | 0.418206 | 7_4:+43002026 | None:intergenic |
TGTGATAGATAGATTGTTGA+AGG | 0.421191 | 7_4:-43002509 | Msa1155150:intron |
TTGAAGATCAATGCACTTGA+AGG | 0.424310 | 7_4:-42996341 | Msa1155150:three_prime_UTR |
GCCTGTCAGGGATATAACTA+TGG | 0.426019 | 7_4:-42996415 | Msa1155150:intron |
AAAAGGACCAAAGACATATC+AGG | 0.426577 | 7_4:-42997586 | Msa1155150:five_prime_UTR |
AAAAGGGGAGAAACGGGAAC+GGG | 0.427372 | 7_4:-43002416 | Msa1155150:five_prime_UTR |
TAGTTTCTTTGATCATTCAT+TGG | 0.431004 | 7_4:+42996098 | None:intergenic |
CTGTTACTTGACAGGGATGT+TGG | 0.431891 | 7_4:-43000895 | Msa1155150:intron |
TCTTTCAATTCATTCATTCC+AGG | 0.434263 | 7_4:-43002684 | Msa1155150:intron |
TTCCTCCCTCTCTTCTCTCA+CGG | 0.434765 | 7_4:-43002907 | Msa1155150:five_prime_UTR |
AGATGGAAGCTAGGAACTTA+AGG | 0.437958 | 7_4:-43002060 | Msa1155150:five_prime_UTR |
ATCAGGTGACTGGTATATAC+AGG | 0.439760 | 7_4:-42998127 | Msa1155150:intron |
GTCTGGGTTAAGCTGTCCTT+TGG | 0.440910 | 7_4:+42999276 | None:intergenic |
TTGTAATTGTATATAACCTT+AGG | 0.442094 | 7_4:-42996218 | Msa1155150:three_prime_UTR |
ATCTGTAGAAGTAAAGTGAT+AGG | 0.442218 | 7_4:-43002573 | Msa1155150:intron |
TTACTGATAAACAAATTATG+AGG | 0.445606 | 7_4:-42998335 | Msa1155150:five_prime_UTR |
AAGAAGAACGGGAACGGGAA+AGG | 0.451694 | 7_4:-43002390 | Msa1155150:five_prime_UTR |
AGCTGAGAAGTTAGAAGGAA+GGG | 0.452156 | 7_4:-43000538 | Msa1155150:five_prime_UTR |
CATAAAAGCAAATAGATAAG+TGG | 0.452901 | 7_4:+42997021 | None:intergenic |
TCATCGAATATGCAATTTCA+AGG | 0.456985 | 7_4:-42997174 | Msa1155150:five_prime_UTR |
GAGAGATGGGAGGAAGAAAG+TGG | 0.460016 | 7_4:+43002881 | None:intergenic |
ATGATCTTGGTGGCCGTCCT+GGG | 0.462970 | 7_4:-42996955 | Msa1155150:CDS |
CCTTTAATTCTTTATGGTGA+TGG | 0.463086 | 7_4:+43002013 | None:intergenic |
GGGTTCAGTTTGGACAGAAC+TGG | 0.463654 | 7_4:+43002723 | None:intergenic |
TGGATATGCAACACCTCCTC+TGG | 0.463674 | 7_4:+42999323 | None:intergenic |
CTCGGTGTGCAAAACAAAGT+TGG | 0.468884 | 7_4:+42996386 | None:intergenic |
CATGCATGCATAATTCTCTC+TGG | 0.470583 | 7_4:-43002290 | Msa1155150:five_prime_UTR |
GCAATATGGTGAAAGAAAAT+GGG | 0.474578 | 7_4:-43000568 | Msa1155150:five_prime_UTR |
GGAACGGGAGGAAGAAGAAC+GGG | 0.475533 | 7_4:-43002401 | Msa1155150:five_prime_UTR |
CCTCCCTCAGGTATCTCGTC+AGG | 0.476130 | 7_4:+42998300 | None:intergenic |
ATGATTAAAGGAAACTGATA+AGG | 0.479594 | 7_4:-43000599 | Msa1155150:intron |
TCTTCCTCCCATCTCTCTCT+CGG | 0.480316 | 7_4:-43002875 | Msa1155150:five_prime_UTR |
ATCGAAAATTTAAACAGCGT+TGG | 0.484696 | 7_4:-42997621 | Msa1155150:five_prime_UTR |
AATGTTAAGTTTGGGTAAGA+GGG | 0.484956 | 7_4:-43002196 | Msa1155150:five_prime_UTR |
TTCTTAAAGTATTCCGGGAA+AGG | 0.486184 | 7_4:+42997220 | None:intergenic |
TCTTAAAGTATTCCGGGAAA+GGG | 0.490143 | 7_4:+42997221 | None:intergenic |
ATAAGGTTGGTGAAGCAATA+TGG | 0.490665 | 7_4:-43000582 | Msa1155150:five_prime_UTR |
GTCATGATCTTAAGAAAAGA+AGG | 0.490748 | 7_4:+42996733 | None:intergenic |
CTTCATAGATAATGCAAGAT+GGG | 0.490793 | 7_4:-42999235 | Msa1155150:five_prime_UTR |
CTTGCAGAAATATGCAGCAC+AGG | 0.492843 | 7_4:-42996809 | Msa1155150:intron |
TCGGTGTGCAAAACAAAGTT+GGG | 0.496240 | 7_4:+42996387 | None:intergenic |
CAGAACTGGAAGAGGAGAAA+AGG | 0.497959 | 7_4:+43002737 | None:intergenic |
CATCGAATATGCAATTTCAA+GGG | 0.504570 | 7_4:-42997173 | Msa1155150:five_prime_UTR |
TATTCCGGGAAAGGGAACTT+TGG | 0.505318 | 7_4:+42997229 | None:intergenic |
GACAGAAGGGAAGATGATCT+TGG | 0.506460 | 7_4:-42996968 | Msa1155150:CDS |
TGAGGTCGAGAGTGAGGCAG+AGG | 0.506694 | 7_4:-43002170 | Msa1155150:five_prime_UTR |
GAGCCAGTCGTCTAGGTCAA+GGG | 0.508608 | 7_4:-42997357 | Msa1155150:five_prime_UTR |
GAGAGGGCCGAGAGAGAGAT+GGG | 0.510742 | 7_4:+43002868 | None:intergenic |
TGCAAATGGTTGCTGCAGAT+TGG | 0.511099 | 7_4:-42997000 | Msa1155150:CDS |
GACTTAACAGTTCTCTGAGT+TGG | 0.513256 | 7_4:+42998083 | None:intergenic |
GAATTGAAAGATTGAAGGAT+GGG | 0.513980 | 7_4:+43002696 | None:intergenic |
TTAAGAAAAGAAGGATTCAA+AGG | 0.515731 | 7_4:+42996742 | None:intergenic |
GGGAACTTTGGTATAAGATA+AGG | 0.516378 | 7_4:+42997241 | None:intergenic |
CCGTCCTGGGAGCATTATGC+AGG | 0.517123 | 7_4:-42996942 | Msa1155150:intron |
GGGAGGAAGAAGAACGGGAA+CGG | 0.518287 | 7_4:-43002396 | Msa1155150:five_prime_UTR |
AGGGGAGAAACGGGAACGGG+AGG | 0.518667 | 7_4:-43002413 | Msa1155150:five_prime_UTR |
TAGATAATGCAAGATGGGAT+GGG | 0.518772 | 7_4:-42999230 | Msa1155150:five_prime_UTR |
CTGGTGGATACTGGAAAGCC+AGG | 0.518819 | 7_4:-42998240 | Msa1155150:five_prime_UTR |
GGCAGCCGCGGCAAATGTCT+GGG | 0.520346 | 7_4:+42999260 | None:intergenic |
GTGTGAGGCGTTCCTCCCTC+AGG | 0.520495 | 7_4:+42998288 | None:intergenic |
ATCTATGAAGTGGGCAGCCG+CGG | 0.523740 | 7_4:+42999248 | None:intergenic |
CAAGACTGAGTAATTGGAGA+TGG | 0.523833 | 7_4:-43002077 | Msa1155150:five_prime_UTR |
TTTGTTGTACATCAGGTGAC+TGG | 0.533031 | 7_4:-42998137 | Msa1155150:intron |
AGTTTGGACAGAACTGGAAG+AGG | 0.533720 | 7_4:+43002729 | None:intergenic |
GGAGCCAGTCGTCTAGGTCA+AGG | 0.534034 | 7_4:-42997358 | Msa1155150:five_prime_UTR |
TAAGAAAAGAAGGATTCAAA+GGG | 0.534209 | 7_4:+42996743 | None:intergenic |
AGGCAACTTATAATTGCCTA+AGG | 0.535020 | 7_4:+42996202 | None:intergenic |
TTAAAGGAAACTGATAAGGT+TGG | 0.535969 | 7_4:-43000595 | Msa1155150:intron |
TCTATAGCTGCAAATTGAAG+TGG | 0.536075 | 7_4:+42996251 | None:intergenic |
TATTATCCTCTTTGTACTCA+CGG | 0.536920 | 7_4:-42997379 | Msa1155150:five_prime_UTR |
TGAGAGGGCCGAGAGAGAGA+TGG | 0.538073 | 7_4:+43002867 | None:intergenic |
TAGCTGAGAAGTTAGAAGGA+AGG | 0.540309 | 7_4:-43000539 | Msa1155150:five_prime_UTR |
CTCACCTCAACTCTGTCACC+TGG | 0.549979 | 7_4:+42998222 | None:intergenic |
ATCTTGCATTATCTATGAAG+TGG | 0.550073 | 7_4:+42999238 | None:intergenic |
ATAGATAATGCAAGATGGGA+TGG | 0.550173 | 7_4:-42999231 | Msa1155150:five_prime_UTR |
TGGAAACCGTGAGAGAAGAG+AGG | 0.550585 | 7_4:+43002901 | None:intergenic |
GTTTGATTGAAAATTTGTGA+TGG | 0.551248 | 7_4:-43002231 | Msa1155150:five_prime_UTR |
GGGGATCAGTCAACAGAAAG+AGG | 0.551550 | 7_4:-42997836 | Msa1155150:five_prime_UTR |
TGAATGAATTGAAAGATTGA+AGG | 0.554429 | 7_4:+43002691 | None:intergenic |
TCTAATTCTAATCTTGCATG+TGG | 0.554519 | 7_4:-43002254 | Msa1155150:five_prime_UTR |
TGAATTGAAAGATTGAAGGA+TGG | 0.556558 | 7_4:+43002695 | None:intergenic |
GAGAAGTTAGAAGGAAGGGT+TGG | 0.557009 | 7_4:-43000534 | Msa1155150:five_prime_UTR |
ACTCACGGAGCCAGTCGTCT+AGG | 0.565978 | 7_4:-42997364 | Msa1155150:five_prime_UTR |
AAAGTGATAGGAGAAGTTGC+TGG | 0.567098 | 7_4:-43002561 | Msa1155150:five_prime_UTR |
AGAAATATGCAGCACAGGGT+GGG | 0.567302 | 7_4:-42996804 | Msa1155150:CDS |
GGGATCTGAGGTCGAGAGTG+AGG | 0.568002 | 7_4:-43002176 | Msa1155150:five_prime_UTR |
TCTTAATAAGCAATCAGAGC+TGG | 0.569488 | 7_4:-42997794 | Msa1155150:five_prime_UTR |
AGCCCCTTGACCTAGACGAC+TGG | 0.570287 | 7_4:+42997354 | None:intergenic |
TTGATGATTAATTCATCATG+AGG | 0.570775 | 7_4:+43002772 | None:intergenic |
ATGCAACACCTCCTCTGGTG+TGG | 0.571539 | 7_4:+42999328 | None:intergenic |
TGATGATTAATTCATCATGA+GGG | 0.577106 | 7_4:+43002773 | None:intergenic |
AGTAATTGGAGATGGAAGCT+AGG | 0.578447 | 7_4:-43002069 | Msa1155150:five_prime_UTR |
GGAAACCGTGAGAGAAGAGA+GGG | 0.579709 | 7_4:+43002902 | None:intergenic |
CTAATTCTAATCTTGCATGT+GGG | 0.583551 | 7_4:-43002253 | Msa1155150:five_prime_UTR |
ACTTCATAGATAATGCAAGA+TGG | 0.584523 | 7_4:-42999236 | Msa1155150:five_prime_UTR |
GGGAACGGGAGGAAGAAGAA+CGG | 0.587711 | 7_4:-43002402 | Msa1155150:five_prime_UTR |
AATTGAAAGATTGAAGGATG+GGG | 0.589629 | 7_4:+43002697 | None:intergenic |
ATTGGTTGAGATCTGACAGA+AGG | 0.589843 | 7_4:-42996982 | Msa1155150:CDS |
CAGAAATATGCAGCACAGGG+TGG | 0.591099 | 7_4:-42996805 | Msa1155150:CDS |
AAAGAAGCTTGCAGTTCTGG+AGG | 0.598501 | 7_4:+43001269 | None:intergenic |
GTGATAGGAGAAGTTGCTGG+TGG | 0.599516 | 7_4:-43002558 | Msa1155150:five_prime_UTR |
AGATAATGCAAGATGGGATG+GGG | 0.599941 | 7_4:-42999229 | Msa1155150:five_prime_UTR |
TTGGTTGAGATCTGACAGAA+GGG | 0.602460 | 7_4:-42996981 | Msa1155150:CDS |
TCAAACAAACCTCTATAGAG+TGG | 0.603888 | 7_4:+42997543 | None:intergenic |
GAGGTCGAGAGTGAGGCAGA+GGG | 0.604687 | 7_4:-43002169 | Msa1155150:five_prime_UTR |
TGATGACAAAACTGTACCAA+AGG | 0.605343 | 7_4:-42999292 | Msa1155150:five_prime_UTR |
TGGGAAATCTCTATTCATGA+AGG | 0.608432 | 7_4:-43002538 | Msa1155150:five_prime_UTR |
AACCGTGAGAGAAGAGAGGG+AGG | 0.614711 | 7_4:+43002905 | None:intergenic |
CTTTAACAAGATCATTCAAG+CGG | 0.617914 | 7_4:-43000465 | Msa1155150:five_prime_UTR |
AGCCAGTCGTCTAGGTCAAG+GGG | 0.618083 | 7_4:-42997356 | Msa1155150:five_prime_UTR |
TCAACCTGCATAATGCTCCC+AGG | 0.618526 | 7_4:+42996938 | None:intergenic |
TGATAGGAGAAGTTGCTGGT+GGG | 0.619992 | 7_4:-43002557 | Msa1155150:five_prime_UTR |
TCTTGCATTATCTATGAAGT+GGG | 0.621537 | 7_4:+42999239 | None:intergenic |
TGATCTTGTTAAAGCAGCTG+AGG | 0.629746 | 7_4:+43000474 | None:intergenic |
ATCGAATATGCAATTTCAAG+GGG | 0.629980 | 7_4:-42997172 | Msa1155150:five_prime_UTR |
TATAAGAACCACACCAGAGG+AGG | 0.636996 | 7_4:-42999336 | Msa1155150:five_prime_UTR |
GAGGAAGAGTAAGAGAGAGA+CGG | 0.641334 | 7_4:-43002331 | Msa1155150:five_prime_UTR |
AAAGCCAGGTGACAGAGTTG+AGG | 0.641668 | 7_4:-42998226 | Msa1155150:intron |
TTGTTGCTAATCTTCCACCT+CGG | 0.643102 | 7_4:+42996368 | None:intergenic |
ACTATTGCATGACAAACTGG+TGG | 0.645480 | 7_4:-42998256 | Msa1155150:five_prime_UTR |
ATACAGGGCTATGAATGTCA+AGG | 0.646972 | 7_4:-42998111 | Msa1155150:five_prime_UTR |
TATGAGACCGATTAAACTCG+AGG | 0.649881 | 7_4:-42999376 | Msa1155150:five_prime_UTR |
TTGCAGAAATATGCAGCACA+GGG | 0.650088 | 7_4:-42996808 | Msa1155150:intron |
CCTGCATAATGCTCCCAGGA+CGG | 0.650448 | 7_4:+42996942 | None:intergenic |
GCAAGCAGTGTAGAGAGCGA+TGG | 0.650454 | 7_4:-43000512 | Msa1155150:five_prime_UTR |
GTTTGGGTAAGAGGGATCTG+AGG | 0.652283 | 7_4:-43002188 | Msa1155150:five_prime_UTR |
GGAAAGGGCCGTCACAACTG+CGG | 0.659297 | 7_4:-43002374 | Msa1155150:five_prime_UTR |
CAGGGCTATGAATGTCAAGG+TGG | 0.661008 | 7_4:-42998108 | Msa1155150:five_prime_UTR |
TCAGGTGACTGGTATATACA+GGG | 0.661864 | 7_4:-42998126 | Msa1155150:intron |
AATAGTAAGCTAACAGTGTG+AGG | 0.667908 | 7_4:+42998273 | None:intergenic |
GGAAAGCATTACACACCAAG+AGG | 0.670420 | 7_4:-42999185 | Msa1155150:intron |
TCTCTCTTACTCTTCCTCAC+CGG | 0.671004 | 7_4:+43002336 | None:intergenic |
AGGGCTATGAATGTCAAGGT+GGG | 0.671069 | 7_4:-42998107 | Msa1155150:five_prime_UTR |
AGAAGGGAAGATGATCTTGG+TGG | 0.671197 | 7_4:-42996965 | Msa1155150:CDS |
CAATATAAGAACCACACCAG+AGG | 0.676256 | 7_4:-42999339 | Msa1155150:five_prime_UTR |
CTTAACCCAGACATTTGCCG+CGG | 0.676329 | 7_4:-42999265 | Msa1155150:five_prime_UTR |
CTGGCTCCGTGAGTACAAAG+AGG | 0.684019 | 7_4:+42997373 | None:intergenic |
GACACCTGACGAGATACCTG+AGG | 0.684151 | 7_4:-42998304 | Msa1155150:five_prime_UTR |
ACACCTGACGAGATACCTGA+GGG | 0.690721 | 7_4:-42998303 | Msa1155150:five_prime_UTR |
ATTCAAGCGGTATCTGACTG+AGG | 0.705680 | 7_4:-43000452 | Msa1155150:five_prime_UTR |
AGGGCCGAGAGAGAGATGGG+AGG | 0.706364 | 7_4:+43002871 | None:intergenic |
CCTGACGAGATACCTGAGGG+AGG | 0.736290 | 7_4:-42998300 | Msa1155150:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTACTGAAATTGATAATTTT+AGG | - | chr7_4:42996401-42996420 | Msa1155150:CDS | 15.0% |
!!! | ATTTTTGTTTTGTTTTGTTT+TGG | - | chr7_4:42996564-42996583 | Msa1155150:intron | 15.0% |
!! | AAGTAACTAAAGAAAAATTA+GGG | - | chr7_4:42996917-42996936 | Msa1155150:intron | 15.0% |
!! | TAATCTAAATCAACTAATTT+AGG | - | chr7_4:42997062-42997081 | Msa1155150:five_prime_UTR | 15.0% |
!! | AATCTAAATCAACTAATTTA+GGG | - | chr7_4:42997063-42997082 | Msa1155150:five_prime_UTR | 15.0% |
!! | ATTCTTATTGTATATGAAAA+AGG | - | chr7_4:42997280-42997299 | Msa1155150:five_prime_UTR | 15.0% |
!!! | ATTGATTTTGAATTTTTAGA+CGG | - | chr7_4:42997378-42997397 | Msa1155150:five_prime_UTR | 15.0% |
!!! | TGGTTATATACTTTTTTTAT+AGG | - | chr7_4:42999324-42999343 | Msa1155150:five_prime_UTR | 15.0% |
!!! | ATTTAAAACAGATGAATTAA+AGG | + | chr7_4:42999566-42999585 | None:intergenic | 15.0% |
!!! | TTCTTATTTTATATCAAATG+AGG | + | chr7_4:43000119-43000138 | None:intergenic | 15.0% |
!!! | TTTTTTTTTGCTAAATTAGA+CGG | - | chr7_4:43000407-43000426 | Msa1155150:intron | 15.0% |
!! | AATAATTATTTAAACTGTAC+TGG | - | chr7_4:43000506-43000525 | Msa1155150:five_prime_UTR | 15.0% |
!! | ATAATTATTTAAACTGTACT+GGG | - | chr7_4:43000507-43000526 | Msa1155150:five_prime_UTR | 15.0% |
!! | ATCAATATATTTATCATACA+GGG | + | chr7_4:43001134-43001153 | None:intergenic | 15.0% |
!! | ATATATAAGTAATTACTTGA+TGG | + | chr7_4:43002147-43002166 | None:intergenic | 15.0% |
!! | TTCATAGCTATTATTATATT+TGG | - | chr7_4:43002509-43002528 | Msa1155150:intron | 15.0% |
!! | TTTAATTAAACCTAATTACC+TGG | + | chr7_4:42996359-42996378 | None:intergenic | 20.0% |
!! | TTTCAGTAAAACAAATCAAA+AGG | + | chr7_4:42996390-42996409 | None:intergenic | 20.0% |
!! | TGTGAAAAGAAAGAAAAAAA+AGG | - | chr7_4:42996589-42996608 | Msa1155150:intron | 20.0% |
!! | GTGAAAAGAAAGAAAAAAAA+GGG | - | chr7_4:42996590-42996609 | Msa1155150:intron | 20.0% |
!! | TGAAAAGAAAGAAAAAAAAG+GGG | - | chr7_4:42996591-42996610 | Msa1155150:intron | 20.0% |
!! | GAAGTAACTAAAGAAAAATT+AGG | - | chr7_4:42996916-42996935 | Msa1155150:intron | 20.0% |
!! | AGTAACTAAAGAAAAATTAG+GGG | - | chr7_4:42996918-42996937 | Msa1155150:intron | 20.0% |
!! | ATCTAAATCAACTAATTTAG+GGG | - | chr7_4:42997064-42997083 | Msa1155150:five_prime_UTR | 20.0% |
!!! | TTGATTTTGAATTTTTAGAC+GGG | - | chr7_4:42997379-42997398 | Msa1155150:five_prime_UTR | 20.0% |
!! | GAAATTGATTACTTTGAATT+TGG | - | chr7_4:42997552-42997571 | Msa1155150:intron | 20.0% |
!! | ATTACTTTGAATTTGGATAT+GGG | - | chr7_4:42997559-42997578 | Msa1155150:five_prime_UTR | 20.0% |
!!! | ATCTAAGATTTGATATGTTA+TGG | - | chr7_4:42997847-42997866 | Msa1155150:intron | 20.0% |
!! | ATATTTGTTTATACGCTTAA+AGG | + | chr7_4:42997927-42997946 | None:intergenic | 20.0% |
!! | CAAAATAAAAAAAAGTGACA+GGG | + | chr7_4:42998095-42998114 | None:intergenic | 20.0% |
!! | TCAAAATAAAAAAAAGTGAC+AGG | + | chr7_4:42998096-42998115 | None:intergenic | 20.0% |
!!! | AATGATTTTCTTGATTACTA+AGG | - | chr7_4:42998232-42998251 | Msa1155150:five_prime_UTR | 20.0% |
!! | TTATTTGGTATGATGATTAA+AGG | - | chr7_4:42998411-42998430 | Msa1155150:intron | 20.0% |
!!! | TCTATTTTCATAAGCTATAT+TGG | - | chr7_4:42998745-42998764 | Msa1155150:intron | 20.0% |
!!! | GTAAAGTGCTTTATTTAAAA+TGG | - | chr7_4:42998922-42998941 | Msa1155150:intron | 20.0% |
!! | CAAAAATTAGATTTGAGAAT+CGG | + | chr7_4:42999010-42999029 | None:intergenic | 20.0% |
!!! | CACTTTTTATGATCTTAAAA+TGG | - | chr7_4:42999136-42999155 | Msa1155150:intron | 20.0% |
!!! | TTTCTACTTATATTTAAGGT+CGG | + | chr7_4:42999380-42999399 | None:intergenic | 20.0% |
!! | AACCTTTCTACTTATATTTA+AGG | + | chr7_4:42999384-42999403 | None:intergenic | 20.0% |
!!! | GATACTTTATTTAGTACAAA+AGG | + | chr7_4:42999982-43000001 | None:intergenic | 20.0% |
!! | TTGACTTTGATGTTATATAT+TGG | + | chr7_4:43000006-43000025 | None:intergenic | 20.0% |
!!! | AGATTTTTAAGTATTTGAGA+TGG | - | chr7_4:43000291-43000310 | Msa1155150:intron | 20.0% |
!! | AAAACACATTGTTCAAAATA+GGG | + | chr7_4:43000575-43000594 | None:intergenic | 20.0% |
!!! | AACATATCTTTTCTAATTTC+AGG | - | chr7_4:43000663-43000682 | Msa1155150:intron | 20.0% |
!! | TTACTGATAAACAAATTATG+AGG | - | chr7_4:43000687-43000706 | Msa1155150:intron | 20.0% |
!! | CATCAATATATTTATCATAC+AGG | + | chr7_4:43001135-43001154 | None:intergenic | 20.0% |
!! | ATAAATATATTGATGAGCAT+GGG | - | chr7_4:43001140-43001159 | Msa1155150:intron | 20.0% |
!!! | TATGTGTTGTTTAATTTTTC+AGG | - | chr7_4:43001339-43001358 | Msa1155150:intron | 20.0% |
!!! | GAAGAAAGGTTTTAAAATTT+TGG | - | chr7_4:43001590-43001609 | Msa1155150:intron | 20.0% |
!! | AAATCCATGATTTACTAAAA+AGG | + | chr7_4:43002390-43002409 | None:intergenic | 20.0% |
!! | TTAACAGTAAAAGATTAGAA+TGG | + | chr7_4:43002550-43002569 | None:intergenic | 20.0% |
!! | TTGTAATTGTATATAACCTT+AGG | - | chr7_4:43002804-43002823 | Msa1155150:five_prime_UTR | 20.0% |
!!! | TGAATCCATTGATTTTAATT+AGG | + | chr7_4:43002849-43002868 | None:intergenic | 20.0% |
!!! | CATATCAATTTTTCTTAACT+GGG | + | chr7_4:43002904-43002923 | None:intergenic | 20.0% |
! | TGATGATTAATTCATCATGA+GGG | + | chr7_4:42996252-42996271 | None:intergenic | 25.0% |
!! | TTGATGATTAATTCATCATG+AGG | + | chr7_4:42996253-42996272 | None:intergenic | 25.0% |
! | TGAATGAATTGAAAGATTGA+AGG | + | chr7_4:42996334-42996353 | None:intergenic | 25.0% |
! | GTTTGATTGAAAATTTGTGA+TGG | - | chr7_4:42996791-42996810 | Msa1155150:CDS | 25.0% |
! | TTGATTTAGATTATGCATGA+GGG | + | chr7_4:42997055-42997074 | None:intergenic | 25.0% |
! | ATTCAATCAAATTATTCCAG+TGG | + | chr7_4:42997242-42997261 | None:intergenic | 25.0% |
! | ACTGGAATAATTTGATTGAA+TGG | - | chr7_4:42997241-42997260 | Msa1155150:five_prime_UTR | 25.0% |
! | CTGGAATAATTTGATTGAAT+GGG | - | chr7_4:42997242-42997261 | Msa1155150:five_prime_UTR | 25.0% |
!!! | ATTTGATTGAATGGGTTTTA+TGG | - | chr7_4:42997250-42997269 | Msa1155150:five_prime_UTR | 25.0% |
! | CATATGAATGATTCAATCAT+AGG | - | chr7_4:42997468-42997487 | Msa1155150:intron | 25.0% |
!! | TGATTCAATCATAGGTTTTA+TGG | - | chr7_4:42997476-42997495 | Msa1155150:intron | 25.0% |
! | GATTACTTTGAATTTGGATA+TGG | - | chr7_4:42997558-42997577 | Msa1155150:five_prime_UTR | 25.0% |
! | ATTGAGTGAATTATATGTTC+AGG | - | chr7_4:42997728-42997747 | Msa1155150:intron | 25.0% |
!! | AACCTTTTTATTCACTATGT+TGG | + | chr7_4:42997816-42997835 | None:intergenic | 25.0% |
!! | TCAAGAAAATCATTCTTTTG+AGG | + | chr7_4:42998226-42998245 | None:intergenic | 25.0% |
!!! | TTTGTTTTGTTGTTTGATTG+TGG | - | chr7_4:42998296-42998315 | Msa1155150:five_prime_UTR | 25.0% |
! | ATGATTAAAGGAAACTGATA+AGG | - | chr7_4:42998423-42998442 | Msa1155150:intron | 25.0% |
! | ACTTATATGATAAGTGTGAA+TGG | + | chr7_4:42998657-42998676 | None:intergenic | 25.0% |
! | GACCTTAAATATAAGTAGAA+AGG | - | chr7_4:42999379-42999398 | Msa1155150:five_prime_UTR | 25.0% |
!! | ACAAATACATGTACCTTTTT+CGG | - | chr7_4:42999416-42999435 | Msa1155150:intron | 25.0% |
! | ACTTTCTTCTCAAAATCATT+TGG | - | chr7_4:42999492-42999511 | Msa1155150:intron | 25.0% |
! | CTTTCTTCTCAAAATCATTT+GGG | - | chr7_4:42999493-42999512 | Msa1155150:intron | 25.0% |
! | ATAACATCAAAGTCAATAGT+AGG | - | chr7_4:43000010-43000029 | Msa1155150:intron | 25.0% |
!! | TCTCAATGACTACAAAATTT+TGG | - | chr7_4:43000079-43000098 | Msa1155150:intron | 25.0% |
!!! | CTTGTTATTATGCATCATAT+AGG | + | chr7_4:43000261-43000280 | None:intergenic | 25.0% |
! | TAAAAGAGATGGGAAAATAT+TGG | + | chr7_4:43000324-43000343 | None:intergenic | 25.0% |
! | AAACACATTGTTCAAAATAG+GGG | + | chr7_4:43000574-43000593 | None:intergenic | 25.0% |
! | CAAAACACATTGTTCAAAAT+AGG | + | chr7_4:43000576-43000595 | None:intergenic | 25.0% |
!!! | CTATTTTGAACAATGTGTTT+TGG | - | chr7_4:43000574-43000593 | Msa1155150:five_prime_UTR | 25.0% |
!!! | TGGATTTTAGTTCATAAACA+TGG | - | chr7_4:43000629-43000648 | Msa1155150:intron | 25.0% |
! | ATATTCTCATGTTTGTTCAA+TGG | - | chr7_4:43000850-43000869 | Msa1155150:five_prime_UTR | 25.0% |
! | GATTCATTTCATTGTTCTAA+AGG | - | chr7_4:43001081-43001100 | Msa1155150:intron | 25.0% |
! | GATAAATATATTGATGAGCA+TGG | - | chr7_4:43001139-43001158 | Msa1155150:intron | 25.0% |
! | TAAATATATTGATGAGCATG+GGG | - | chr7_4:43001141-43001160 | Msa1155150:intron | 25.0% |
! | TGTTTAAGAATCCGAAAAAA+GGG | - | chr7_4:43001754-43001773 | Msa1155150:intron | 25.0% |
! | CTGTATTGTGAAATCTTTAA+AGG | - | chr7_4:43001922-43001941 | Msa1155150:intron | 25.0% |
! | GAAAAAAATCTGATTGGTAA+AGG | + | chr7_4:43001956-43001975 | None:intergenic | 25.0% |
! | GTGAATGAAAAAAATCTGAT+TGG | + | chr7_4:43001962-43001981 | None:intergenic | 25.0% |
! | CATAAAAGCAAATAGATAAG+TGG | + | chr7_4:43002004-43002023 | None:intergenic | 25.0% |
!!! | TCTATTTGCTTTTATGCAAA+TGG | - | chr7_4:43002008-43002027 | Msa1155150:intron | 25.0% |
! | ATGTTTACAATGAAAAACTC+AGG | + | chr7_4:43002244-43002263 | None:intergenic | 25.0% |
!! | TTTTTCATTGTAAACATCTG+TGG | - | chr7_4:43002247-43002266 | Msa1155150:five_prime_UTR | 25.0% |
! | TAAGAAAAGAAGGATTCAAA+GGG | + | chr7_4:43002282-43002301 | None:intergenic | 25.0% |
! | TTAAGAAAAGAAGGATTCAA+AGG | + | chr7_4:43002283-43002302 | None:intergenic | 25.0% |
! | AAAGAAACCTACTTTAGATA+TGG | + | chr7_4:43002319-43002338 | None:intergenic | 25.0% |
!!! | CTTTCCTTTTTAGTAAATCA+TGG | - | chr7_4:43002383-43002402 | Msa1155150:five_prime_UTR | 25.0% |
! | TTAATCATGAAATTGCAAGT+TGG | - | chr7_4:43002408-43002427 | Msa1155150:five_prime_UTR | 25.0% |
!!! | CTTTGAAATTGGCATAATTT+CGG | - | chr7_4:43002442-43002461 | Msa1155150:intron | 25.0% |
! | AATTAATCAAAGTTCTCAAG+TGG | - | chr7_4:43002471-43002490 | Msa1155150:intron | 25.0% |
!!! | CATTGATTTTAATTAGGCAA+AGG | + | chr7_4:43002843-43002862 | None:intergenic | 25.0% |
! | CTTTGCCTAATTAAAATCAA+TGG | - | chr7_4:43002841-43002860 | Msa1155150:five_prime_UTR | 25.0% |
!! | GCATATCAATTTTTCTTAAC+TGG | + | chr7_4:43002905-43002924 | None:intergenic | 25.0% |
! | TTTGCATGATGATTTTCATG+GGG | + | chr7_4:42996216-42996235 | None:intergenic | 30.0% |
! | GTTTGCATGATGATTTTCAT+GGG | + | chr7_4:42996217-42996236 | None:intergenic | 30.0% |
! | AGTTTGCATGATGATTTTCA+TGG | + | chr7_4:42996218-42996237 | None:intergenic | 30.0% |
AATTGAAAGATTGAAGGATG+GGG | + | chr7_4:42996328-42996347 | None:intergenic | 30.0% | |
GAATTGAAAGATTGAAGGAT+GGG | + | chr7_4:42996329-42996348 | None:intergenic | 30.0% | |
TGAATTGAAAGATTGAAGGA+TGG | + | chr7_4:42996330-42996349 | None:intergenic | 30.0% | |
TCTTTCAATTCATTCATTCC+AGG | - | chr7_4:42996338-42996357 | Msa1155150:three_prime_UTR | 30.0% | |
TTCATTCATTCCAGGTAATT+AGG | - | chr7_4:42996346-42996365 | Msa1155150:three_prime_UTR | 30.0% | |
!!! | AGGTTTGATGCTTTTGATTT+TGG | - | chr7_4:42996421-42996440 | Msa1155150:intron | 30.0% |
ATCTGTAGAAGTAAAGTGAT+AGG | - | chr7_4:42996449-42996468 | Msa1155150:intron | 30.0% | |
TGTGATAGATAGATTGTTGA+AGG | - | chr7_4:42996513-42996532 | Msa1155150:intron | 30.0% | |
AAGAAAAAAAAGGGGAGAAA+CGG | - | chr7_4:42996599-42996618 | Msa1155150:intron | 30.0% | |
TCTAATTCTAATCTTGCATG+TGG | - | chr7_4:42996768-42996787 | Msa1155150:CDS | 30.0% | |
CTAATTCTAATCTTGCATGT+GGG | - | chr7_4:42996769-42996788 | Msa1155150:CDS | 30.0% | |
TGTGAGAAGAATGTTAAGTT+TGG | - | chr7_4:42996817-42996836 | Msa1155150:intron | 30.0% | |
GTGAGAAGAATGTTAAGTTT+GGG | - | chr7_4:42996818-42996837 | Msa1155150:intron | 30.0% | |
AATGTTAAGTTTGGGTAAGA+GGG | - | chr7_4:42996826-42996845 | Msa1155150:intron | 30.0% | |
AGAGTAGAAGAAATGGAATT+AGG | - | chr7_4:42996879-42996898 | Msa1155150:intron | 30.0% | |
GAGTAGAAGAAATGGAATTA+GGG | - | chr7_4:42996880-42996899 | Msa1155150:intron | 30.0% | |
CCTTTAATTCTTTATGGTGA+TGG | + | chr7_4:42997012-42997031 | None:intergenic | 30.0% | |
CCATCACCATAAAGAATTAA+AGG | - | chr7_4:42997009-42997028 | Msa1155150:exon | 30.0% | |
TCACCATAAAGAATTAAAGG+TGG | - | chr7_4:42997012-42997031 | Msa1155150:exon | 30.0% | |
CACCATAAAGAATTAAAGGT+GGG | - | chr7_4:42997013-42997032 | Msa1155150:exon | 30.0% | |
AACCCACCTTTAATTCTTTA+TGG | + | chr7_4:42997018-42997037 | None:intergenic | 30.0% | |
! | GTTGATTTAGATTATGCATG+AGG | + | chr7_4:42997056-42997075 | None:intergenic | 30.0% |
TGAATGATAGCATGATTGAA+AGG | - | chr7_4:42997203-42997222 | Msa1155150:five_prime_UTR | 30.0% | |
GGAGATTATAAAAATGAGCT+AGG | - | chr7_4:42997301-42997320 | Msa1155150:five_prime_UTR | 30.0% | |
!! | TTTATTGCAGCAGTTGATAA+AGG | - | chr7_4:42997774-42997793 | Msa1155150:five_prime_UTR | 30.0% |
TGCCAACATAGTGAATAAAA+AGG | - | chr7_4:42997811-42997830 | Msa1155150:five_prime_UTR | 30.0% | |
!! | AATGTTTTCTGTTACTTGAC+AGG | - | chr7_4:42998119-42998138 | Msa1155150:five_prime_UTR | 30.0% |
!! | ATGTTTTCTGTTACTTGACA+GGG | - | chr7_4:42998120-42998139 | Msa1155150:five_prime_UTR | 30.0% |
!!! | TTGTTGTTTGATTGTGGTTT+TGG | - | chr7_4:42998302-42998321 | Msa1155150:five_prime_UTR | 30.0% |
TTAAAGGAAACTGATAAGGT+TGG | - | chr7_4:42998427-42998446 | Msa1155150:intron | 30.0% | |
AGCAATATGGTGAAAGAAAA+TGG | - | chr7_4:42998453-42998472 | Msa1155150:intron | 30.0% | |
GCAATATGGTGAAAGAAAAT+GGG | - | chr7_4:42998454-42998473 | Msa1155150:intron | 30.0% | |
CTTTAACAAGATCATTCAAG+CGG | - | chr7_4:42998557-42998576 | Msa1155150:intron | 30.0% | |
!! | AACAATCCTAGAAGTGTTTA+TGG | - | chr7_4:42998836-42998855 | Msa1155150:intron | 30.0% |
TAATTAGACCATGTTTGGAT+TGG | + | chr7_4:42998883-42998902 | None:intergenic | 30.0% | |
ACAGATAATTAGACCATGTT+TGG | + | chr7_4:42998888-42998907 | None:intergenic | 30.0% | |
TATAGAATCGATCACTATCT+TGG | - | chr7_4:42998954-42998973 | Msa1155150:intron | 30.0% | |
! | ATCTAATTTTTGACCCTTTG+TGG | - | chr7_4:42999018-42999037 | Msa1155150:intron | 30.0% |
! | TTGATATTCTCAGCAGATTT+TGG | - | chr7_4:42999068-42999087 | Msa1155150:intron | 30.0% |
! | AAAAAGTGTAAATGCTGCAA+AGG | + | chr7_4:42999124-42999143 | None:intergenic | 30.0% |
TGTAGGTACTTTGACAATTA+TGG | - | chr7_4:42999190-42999209 | Msa1155150:five_prime_UTR | 30.0% | |
AGAGGACATTAGAAATGAAA+AGG | - | chr7_4:42999294-42999313 | Msa1155150:five_prime_UTR | 30.0% | |
AGAAATGAAAAGGTCTCATA+TGG | - | chr7_4:42999304-42999323 | Msa1155150:five_prime_UTR | 30.0% | |
! | TACTTATATTTAAGGTCGGA+GGG | + | chr7_4:42999376-42999395 | None:intergenic | 30.0% |
!!! | ACCTTTTTCGGTCAAATATA+AGG | - | chr7_4:42999428-42999447 | Msa1155150:intron | 30.0% |
CATGACTTTCAATTGCTTAA+TGG | - | chr7_4:42999599-42999618 | Msa1155150:intron | 30.0% | |
!! | TACAGTTTTGTCATCAATGT+AGG | + | chr7_4:42999726-42999745 | None:intergenic | 30.0% |
TCTTGCATTATCTATGAAGT+GGG | + | chr7_4:42999786-42999805 | None:intergenic | 30.0% | |
ATCTTGCATTATCTATGAAG+TGG | + | chr7_4:42999787-42999806 | None:intergenic | 30.0% | |
ACTTCATAGATAATGCAAGA+TGG | - | chr7_4:42999786-42999805 | Msa1155150:intron | 30.0% | |
CTTCATAGATAATGCAAGAT+GGG | - | chr7_4:42999787-42999806 | Msa1155150:intron | 30.0% | |
TGTATTCTGTATTGTGACAT+TGG | + | chr7_4:43000058-43000077 | None:intergenic | 30.0% | |
TAACCAAGAAACACTTATTC+TGG | + | chr7_4:43000384-43000403 | None:intergenic | 30.0% | |
!! | GGTAGATTTTAGTGATAAGT+TGG | - | chr7_4:43000528-43000547 | Msa1155150:five_prime_UTR | 30.0% |
! | TTTAGTGATAAGTTGGATGA+TGG | - | chr7_4:43000535-43000554 | Msa1155150:five_prime_UTR | 30.0% |
TAAACAAATTATGAGGCTTC+AGG | - | chr7_4:43000694-43000713 | Msa1155150:intron | 30.0% | |
! | ATCTATTTATCAGAGTGTCA+TGG | + | chr7_4:43000832-43000851 | None:intergenic | 30.0% |
ATGTACAACAAAACACTCAT+GGG | + | chr7_4:43000877-43000896 | None:intergenic | 30.0% | |
AGACAAGATGAAAAATGCAA+AGG | + | chr7_4:43001017-43001036 | None:intergenic | 30.0% | |
! | TGAATCATGCCAACTTTTAA+GGG | + | chr7_4:43001067-43001086 | None:intergenic | 30.0% |
! | ATGAATCATGCCAACTTTTA+AGG | + | chr7_4:43001068-43001087 | None:intergenic | 30.0% |
! | AAAATGTGTTGCTATCATGA+AGG | - | chr7_4:43001105-43001124 | Msa1155150:intron | 30.0% |
AACAATTGACAACAAATGCA+GGG | + | chr7_4:43001299-43001318 | None:intergenic | 30.0% | |
AAACAATTGACAACAAATGC+AGG | + | chr7_4:43001300-43001319 | None:intergenic | 30.0% | |
!! | TTTTCAGGAAATATACAGTC+TGG | - | chr7_4:43001354-43001373 | Msa1155150:intron | 30.0% |
ATCGAAAATTTAAACAGCGT+TGG | - | chr7_4:43001401-43001420 | Msa1155150:intron | 30.0% | |
GTTGGTTATCTACTCAAAAA+AGG | - | chr7_4:43001419-43001438 | Msa1155150:intron | 30.0% | |
AGAGTTGCACATTAATAAGA+TGG | + | chr7_4:43001511-43001530 | None:intergenic | 30.0% | |
TATTATCCTCTTTGTACTCA+CGG | - | chr7_4:43001643-43001662 | Msa1155150:intron | 30.0% | |
GTGTTTAAGAATCCGAAAAA+AGG | - | chr7_4:43001753-43001772 | Msa1155150:intron | 30.0% | |
! | AGCACATTCTTAAAGTATTC+CGG | + | chr7_4:43001811-43001830 | None:intergenic | 30.0% |
TCATCGAATATGCAATTTCA+AGG | - | chr7_4:43001848-43001867 | Msa1155150:intron | 30.0% | |
CATCGAATATGCAATTTCAA+GGG | - | chr7_4:43001849-43001868 | Msa1155150:intron | 30.0% | |
ATCGAATATGCAATTTCAAG+GGG | - | chr7_4:43001850-43001869 | Msa1155150:intron | 30.0% | |
AGCAAATAGATAAGTGGTTA+AGG | + | chr7_4:43001998-43002017 | None:intergenic | 30.0% | |
GTCATGATCTTAAGAAAAGA+AGG | + | chr7_4:43002292-43002311 | None:intergenic | 30.0% | |
!! | CTAATCTGAGTCTTTGAAAT+TGG | - | chr7_4:43002431-43002450 | Msa1155150:intron | 30.0% |
! | CAATTTTTCTTAACTGGGTT+CGG | + | chr7_4:43002899-43002918 | None:intergenic | 30.0% |
! | GTGAGGATTGTAGAATTTTG+GGG | + | chr7_4:42996188-42996207 | None:intergenic | 35.0% |
! | GGTGAGGATTGTAGAATTTT+GGG | + | chr7_4:42996189-42996208 | None:intergenic | 35.0% |
! | TGATGATTTTCATGGGGTTT+GGG | + | chr7_4:42996210-42996229 | None:intergenic | 35.0% |
! | ATGATGATTTTCATGGGGTT+TGG | + | chr7_4:42996211-42996230 | None:intergenic | 35.0% |
TGGGAAATCTCTATTCATGA+AGG | - | chr7_4:42996484-42996503 | Msa1155150:intron | 35.0% | |
AGAAAAAAAAGGGGAGAAAC+GGG | - | chr7_4:42996600-42996619 | Msa1155150:intron | 35.0% | |
ATGCATGCATGACTTTAGAT+TGG | + | chr7_4:42996723-42996742 | None:intergenic | 35.0% | |
GAATGTTAAGTTTGGGTAAG+AGG | - | chr7_4:42996825-42996844 | Msa1155150:intron | 35.0% | |
!! | GGTTTTCAAGACTGAGTAAT+TGG | - | chr7_4:42996939-42996958 | Msa1155150:intron | 35.0% |
!! | AGGTTTATTGATTTAGCCAC+TGG | - | chr7_4:42997223-42997242 | Msa1155150:five_prime_UTR | 35.0% |
ATAACTGCAACTTATGCAAC+TGG | + | chr7_4:42997406-42997425 | None:intergenic | 35.0% | |
CATAAGTTGCAGTTATAAGC+TGG | - | chr7_4:42997410-42997429 | Msa1155150:intron | 35.0% | |
ATAAAAGAAGCTTGCAGTTC+TGG | + | chr7_4:42997759-42997778 | None:intergenic | 35.0% | |
! | TTGAGTTGTAAACTGTCAAC+GGG | + | chr7_4:42997989-42998008 | None:intergenic | 35.0% |
! | GTTGAGTTGTAAACTGTCAA+CGG | + | chr7_4:42997990-42998009 | None:intergenic | 35.0% |
TTGACAGTTTACAACTCAAC+AGG | - | chr7_4:42997990-42998009 | Msa1155150:intron | 35.0% | |
TGACAGTTTACAACTCAACA+GGG | - | chr7_4:42997991-42998010 | Msa1155150:intron | 35.0% | |
!! | ATTCTGAAGCGTGTAGAAAA+AGG | - | chr7_4:42998169-42998188 | Msa1155150:intron | 35.0% |
ACTAAGGTAGCAGTTTATGT+TGG | - | chr7_4:42998248-42998267 | Msa1155150:five_prime_UTR | 35.0% | |
!! | TAGCAGTTTATGTTGGTTTG+AGG | - | chr7_4:42998255-42998274 | Msa1155150:five_prime_UTR | 35.0% |
TGAGGTTATGAGATGGTTAT+TGG | - | chr7_4:42998273-42998292 | Msa1155150:five_prime_UTR | 35.0% | |
!! | ATAAGGTTGGTGAAGCAATA+TGG | - | chr7_4:42998440-42998459 | Msa1155150:intron | 35.0% |
CAAATAGCTGAGAAGTTAGA+AGG | - | chr7_4:42998479-42998498 | Msa1155150:intron | 35.0% | |
! | TGACTGAGGATCAAATTTTC+AGG | - | chr7_4:42998584-42998603 | Msa1155150:intron | 35.0% |
AACTACACTTTGACTGTGTT+TGG | - | chr7_4:42998613-42998632 | Msa1155150:intron | 35.0% | |
!! | ACACTTCTAGGATTGTTTGA+AGG | + | chr7_4:42998833-42998852 | None:intergenic | 35.0% |
CAAACAATCCAATCCAAACA+TGG | - | chr7_4:42998872-42998891 | Msa1155150:intron | 35.0% | |
TTCATATCTGTTCCATGTGT+AGG | - | chr7_4:42999173-42999192 | Msa1155150:intron | 35.0% | |
! | ATTGTCAAAGTACCTACACA+TGG | + | chr7_4:42999188-42999207 | None:intergenic | 35.0% |
AATACTAGTCCTCTTTGCAA+TGG | - | chr7_4:42999249-42999268 | Msa1155150:five_prime_UTR | 35.0% | |
AATGGAAACTCCTGTTAGTT+TGG | - | chr7_4:42999267-42999286 | Msa1155150:five_prime_UTR | 35.0% | |
! | CTACTTATATTTAAGGTCGG+AGG | + | chr7_4:42999377-42999396 | None:intergenic | 35.0% |
GCCTTATATTTGACCGAAAA+AGG | + | chr7_4:42999432-42999451 | None:intergenic | 35.0% | |
! | TTTTCGGTCAAATATAAGGC+CGG | - | chr7_4:42999432-42999451 | Msa1155150:intron | 35.0% |
!!! | AAAGTCCAGGTTTTAAACTC+TGG | + | chr7_4:42999477-42999496 | None:intergenic | 35.0% |
!! | TGATTTTGAGAAGAAAGTCC+AGG | + | chr7_4:42999490-42999509 | None:intergenic | 35.0% |
TCTTCTCAAAATCATTTGGG+TGG | - | chr7_4:42999496-42999515 | Msa1155150:intron | 35.0% | |
! | TCAATTGCTTAATGGATGTC+AGG | - | chr7_4:42999607-42999626 | Msa1155150:intron | 35.0% |
ACTACATCCTCGAGTTTAAT+CGG | + | chr7_4:42999656-42999675 | None:intergenic | 35.0% | |
! | AAACTCGAGGATGTAGTTTT+AGG | - | chr7_4:42999659-42999678 | Msa1155150:intron | 35.0% |
TGATGACAAAACTGTACCAA+AGG | - | chr7_4:42999730-42999749 | Msa1155150:intron | 35.0% | |
ATAGATAATGCAAGATGGGA+TGG | - | chr7_4:42999791-42999810 | Msa1155150:intron | 35.0% | |
TAGATAATGCAAGATGGGAT+GGG | - | chr7_4:42999792-42999811 | Msa1155150:intron | 35.0% | |
!!! | TACCTTTTTTGATGAAGGCT+GGG | - | chr7_4:42999816-42999835 | Msa1155150:intron | 35.0% |
TATTCCTTTCACTTACCTCT+TGG | + | chr7_4:42999855-42999874 | None:intergenic | 35.0% | |
TAGCAGATCGTGAAAATTTG+CGG | - | chr7_4:42999896-42999915 | Msa1155150:intron | 35.0% | |
!! | TTGTGACATTGGTTTGATGT+TGG | + | chr7_4:43000047-43000066 | None:intergenic | 35.0% |
GATCTCAGCTTAAAAGAGAT+GGG | + | chr7_4:43000334-43000353 | None:intergenic | 35.0% | |
TGATCTCAGCTTAAAAGAGA+TGG | + | chr7_4:43000335-43000354 | None:intergenic | 35.0% | |
! | TCTCTTTTAAGCTGAGATCA+AGG | - | chr7_4:43000335-43000354 | Msa1155150:intron | 35.0% |
! | CTCTTTTAAGCTGAGATCAA+GGG | - | chr7_4:43000336-43000355 | Msa1155150:intron | 35.0% |
ATGCCAGAATAAGTGTTTCT+TGG | - | chr7_4:43000378-43000397 | Msa1155150:intron | 35.0% | |
!! | GTTTTGGTCATGTGACTATT+TGG | - | chr7_4:43000590-43000609 | Msa1155150:five_prime_UTR | 35.0% |
!! | TCATGTGACTATTTGGTGTA+AGG | - | chr7_4:43000597-43000616 | Msa1155150:intron | 35.0% |
! | TTGGTGTAAGGTTTTTCACT+TGG | - | chr7_4:43000609-43000628 | Msa1155150:intron | 35.0% |
AATAGTAAGCTAACAGTGTG+AGG | + | chr7_4:43000752-43000771 | None:intergenic | 35.0% | |
CTTACTATTGCATGACAAAC+TGG | - | chr7_4:43000763-43000782 | Msa1155150:intron | 35.0% | |
GATGTACAACAAAACACTCA+TGG | + | chr7_4:43000878-43000897 | None:intergenic | 35.0% | |
!! | TGAGTGTTTTGTTGTACATC+AGG | - | chr7_4:43000878-43000897 | Msa1155150:five_prime_UTR | 35.0% |
!!! | GACATTTGTTTTGTTCCGTT+TGG | - | chr7_4:43001041-43001060 | Msa1155150:intron | 35.0% |
!!! | TTGTTGATTTTGGTTGAAGC+AGG | - | chr7_4:43001164-43001183 | Msa1155150:intron | 35.0% |
!!! | TGTTGATTTTGGTTGAAGCA+GGG | - | chr7_4:43001165-43001184 | Msa1155150:intron | 35.0% |
TCTTAATAAGCAATCAGAGC+TGG | - | chr7_4:43001228-43001247 | Msa1155150:five_prime_UTR | 35.0% | |
!! | TCGATGAAAGTATCCATATC+AGG | + | chr7_4:43001386-43001405 | None:intergenic | 35.0% |
AAAAGGACCAAAGACATATC+AGG | - | chr7_4:43001436-43001455 | Msa1155150:intron | 35.0% | |
TCAAACAAACCTCTATAGAG+TGG | + | chr7_4:43001482-43001501 | None:intergenic | 35.0% | |
! | GGTAAGGCATTATAGATTCT+TGG | + | chr7_4:43001542-43001561 | None:intergenic | 35.0% |
TAATACCTGCATGTGTCAAA+AGG | + | chr7_4:43001628-43001647 | None:intergenic | 35.0% | |
!!! | GATAAGGTACACCCTTTTTT+CGG | + | chr7_4:43001768-43001787 | None:intergenic | 35.0% |
GGGAACTTTGGTATAAGATA+AGG | + | chr7_4:43001784-43001803 | None:intergenic | 35.0% | |
! | TCTTAAAGTATTCCGGGAAA+GGG | + | chr7_4:43001804-43001823 | None:intergenic | 35.0% |
! | TTCTTAAAGTATTCCGGGAA+AGG | + | chr7_4:43001805-43001824 | None:intergenic | 35.0% |
! | GCACATTCTTAAAGTATTCC+GGG | + | chr7_4:43001810-43001829 | None:intergenic | 35.0% |
AAATTAATGTTGTGCCTGTC+AGG | - | chr7_4:43002594-43002613 | Msa1155150:intron | 35.0% | |
AATTAATGTTGTGCCTGTCA+GGG | - | chr7_4:43002595-43002614 | Msa1155150:intron | 35.0% | |
TTGAAGATCAATGCACTTGA+AGG | - | chr7_4:43002681-43002700 | Msa1155150:intron | 35.0% | |
TCTATAGCTGCAAATTGAAG+TGG | + | chr7_4:43002774-43002793 | None:intergenic | 35.0% | |
AGGCAACTTATAATTGCCTA+AGG | + | chr7_4:43002823-43002842 | None:intergenic | 35.0% | |
!!! | TTTTGGGGTTGAGAATGAGA+GGG | + | chr7_4:42996173-42996192 | None:intergenic | 40.0% |
!!! | ATTTTGGGGTTGAGAATGAG+AGG | + | chr7_4:42996174-42996193 | None:intergenic | 40.0% |
! | GGGTGAGGATTGTAGAATTT+TGG | + | chr7_4:42996190-42996209 | None:intergenic | 40.0% |
AAGATTGAAGGATGGGGTTA+GGG | + | chr7_4:42996322-42996341 | None:intergenic | 40.0% | |
AAAGATTGAAGGATGGGGTT+AGG | + | chr7_4:42996323-42996342 | None:intergenic | 40.0% | |
AAAGTGATAGGAGAAGTTGC+TGG | - | chr7_4:42996461-42996480 | Msa1155150:intron | 40.0% | |
CATGCATGCATAATTCTCTC+TGG | - | chr7_4:42996732-42996751 | Msa1155150:CDS | 40.0% | |
AGGGAGAAGAGTAGAAGAAA+TGG | - | chr7_4:42996872-42996891 | Msa1155150:intron | 40.0% | |
CAAGACTGAGTAATTGGAGA+TGG | - | chr7_4:42996945-42996964 | Msa1155150:CDS | 40.0% | |
AGTAATTGGAGATGGAAGCT+AGG | - | chr7_4:42996953-42996972 | Msa1155150:CDS | 40.0% | |
AGATGGAAGCTAGGAACTTA+AGG | - | chr7_4:42996962-42996981 | Msa1155150:CDS | 40.0% | |
AGATTATGCATGAGGGATGA+GGG | + | chr7_4:42997048-42997067 | None:intergenic | 40.0% | |
TAGATTATGCATGAGGGATG+AGG | + | chr7_4:42997049-42997068 | None:intergenic | 40.0% | |
TCACACGAAGACAATGCATT+TGG | + | chr7_4:42997586-42997605 | None:intergenic | 40.0% | |
CATTGTCTTCGTGTGAGTAT+TGG | - | chr7_4:42997590-42997609 | Msa1155150:five_prime_UTR | 40.0% | |
TGAGTTGTAAACTGTCAACG+GGG | + | chr7_4:42997988-42998007 | None:intergenic | 40.0% | |
TTGAAGAATGAGCAGCATGA+AGG | + | chr7_4:42998053-42998072 | None:intergenic | 40.0% | |
GTGACAGGGAACATATCATT+AGG | + | chr7_4:42998081-42998100 | None:intergenic | 40.0% | |
TGAAGCGTGTAGAAAAAGGT+TGG | - | chr7_4:42998173-42998192 | Msa1155150:intron | 40.0% | |
GAAGCGTGTAGAAAAAGGTT+GGG | - | chr7_4:42998174-42998193 | Msa1155150:intron | 40.0% | |
AAGCGTGTAGAAAAAGGTTG+GGG | - | chr7_4:42998175-42998194 | Msa1155150:intron | 40.0% | |
!! | GTTGGTTTGAGGTTATGAGA+TGG | - | chr7_4:42998266-42998285 | Msa1155150:five_prime_UTR | 40.0% |
TAGCTGAGAAGTTAGAAGGA+AGG | - | chr7_4:42998483-42998502 | Msa1155150:intron | 40.0% | |
AGCTGAGAAGTTAGAAGGAA+GGG | - | chr7_4:42998484-42998503 | Msa1155150:intron | 40.0% | |
TGATCTTGTTAAAGCAGCTG+AGG | + | chr7_4:42998551-42998570 | None:intergenic | 40.0% | |
CTATCTTGGAAAAGAGCTTG+TGG | - | chr7_4:42998968-42998987 | Msa1155150:intron | 40.0% | |
!! | TCAGCAGATTTTGGTACTGA+AGG | - | chr7_4:42999077-42999096 | Msa1155150:intron | 40.0% |
! | TCCTGTTAGTTTGGATGTAG+AGG | - | chr7_4:42999276-42999295 | Msa1155150:five_prime_UTR | 40.0% |
TCCTCTACATCCAAACTAAC+AGG | + | chr7_4:42999280-42999299 | None:intergenic | 40.0% | |
CTTCTAGCATATACATCCTC+CGG | + | chr7_4:42999454-42999473 | None:intergenic | 40.0% | |
! | AGAAGCCAGAGTTTAAAACC+TGG | - | chr7_4:42999469-42999488 | Msa1155150:intron | 40.0% |
TATGAGACCGATTAAACTCG+AGG | - | chr7_4:42999646-42999665 | Msa1155150:intron | 40.0% | |
CTCTGGTGTGGTTCTTATAT+TGG | + | chr7_4:42999685-42999704 | None:intergenic | 40.0% | |
CAATATAAGAACCACACCAG+AGG | - | chr7_4:42999683-42999702 | Msa1155150:intron | 40.0% | |
! | GTTTTGTCATCAATGTAGGC+TGG | + | chr7_4:42999722-42999741 | None:intergenic | 40.0% |
AGATAATGCAAGATGGGATG+GGG | - | chr7_4:42999793-42999812 | Msa1155150:intron | 40.0% | |
!!! | TGGGGTACCTTTTTTGATGA+AGG | - | chr7_4:42999811-42999830 | Msa1155150:intron | 40.0% |
!!! | GTACCTTTTTTGATGAAGGC+TGG | - | chr7_4:42999815-42999834 | Msa1155150:intron | 40.0% |
TTCCCAGCCTTCATCAAAAA+AGG | + | chr7_4:42999821-42999840 | None:intergenic | 40.0% | |
AAAATAGGGGCTAATGACCA+TGG | + | chr7_4:43000561-43000580 | None:intergenic | 40.0% | |
ACTATTGCATGACAAACTGG+TGG | - | chr7_4:43000766-43000785 | Msa1155150:intron | 40.0% | |
! | TTTGTTGTACATCAGGTGAC+TGG | - | chr7_4:43000885-43000904 | Msa1155150:intron | 40.0% |
ATCAGGTGACTGGTATATAC+AGG | - | chr7_4:43000895-43000914 | Msa1155150:intron | 40.0% | |
TCAGGTGACTGGTATATACA+GGG | - | chr7_4:43000896-43000915 | Msa1155150:intron | 40.0% | |
ATACAGGGCTATGAATGTCA+AGG | - | chr7_4:43000911-43000930 | Msa1155150:intron | 40.0% | |
GACTTAACAGTTCTCTGAGT+TGG | + | chr7_4:43000942-43000961 | None:intergenic | 40.0% | |
!!! | GTTGATTTTGGTTGAAGCAG+GGG | - | chr7_4:43001166-43001185 | Msa1155150:intron | 40.0% |
!!! | TTGATTTTGGTTGAAGCAGG+GGG | - | chr7_4:43001167-43001186 | Msa1155150:intron | 40.0% |
! | TTTTACGCTCCACTCTATAG+AGG | - | chr7_4:43001470-43001489 | Msa1155150:intron | 40.0% |
AACCTTTCTTCCCCTTATAG+AGG | + | chr7_4:43001581-43001600 | None:intergenic | 40.0% | |
! | ACAATCCTTTTGACACATGC+AGG | - | chr7_4:43001620-43001639 | Msa1155150:intron | 40.0% |
TATACCAAAGTTCCCTTTCC+CGG | - | chr7_4:43001789-43001808 | Msa1155150:intron | 40.0% | |
ATTGGTTGAGATCTGACAGA+AGG | - | chr7_4:43002040-43002059 | Msa1155150:five_prime_UTR | 40.0% | |
TTGGTTGAGATCTGACAGAA+GGG | - | chr7_4:43002041-43002060 | Msa1155150:five_prime_UTR | 40.0% | |
! | AGCATTATGCAGGTTGACTT+TGG | - | chr7_4:43002090-43002109 | Msa1155150:five_prime_UTR | 40.0% |
TTGCAGAAATATGCAGCACA+GGG | - | chr7_4:43002214-43002233 | Msa1155150:five_prime_UTR | 40.0% | |
! | GACTCTGCCATATCTAAAGT+AGG | - | chr7_4:43002309-43002328 | Msa1155150:five_prime_UTR | 40.0% |
TCAAAGTTCTCAAGTGGCAA+CGG | - | chr7_4:43002477-43002496 | Msa1155150:intron | 40.0% | |
TCGGTGTGCAAAACAAAGTT+GGG | + | chr7_4:43002638-43002657 | None:intergenic | 40.0% | |
TTGTTGCTAATCTTCCACCT+CGG | + | chr7_4:43002657-43002676 | None:intergenic | 40.0% | |
! | ATTTTCATGGGGTTTGGGTG+AGG | + | chr7_4:42996205-42996224 | None:intergenic | 45.0% |
CAGAACTGGAAGAGGAGAAA+AGG | + | chr7_4:42996288-42996307 | None:intergenic | 45.0% | |
AGTTTGGACAGAACTGGAAG+AGG | + | chr7_4:42996296-42996315 | None:intergenic | 45.0% | |
TGATAGGAGAAGTTGCTGGT+GGG | - | chr7_4:42996465-42996484 | Msa1155150:intron | 45.0% | |
AAAAAGGGGAGAAACGGGAA+CGG | - | chr7_4:42996605-42996624 | Msa1155150:intron | 45.0% | |
TCTCTCTTACTCTTCCTCAC+CGG | + | chr7_4:42996689-42996708 | None:intergenic | 45.0% | |
GAGGAAGAGTAAGAGAGAGA+CGG | - | chr7_4:42996691-42996710 | Msa1155150:intron | 45.0% | |
GCAGAAAATAGCTTCAGTGC+AGG | - | chr7_4:42997341-42997360 | Msa1155150:five_prime_UTR | 45.0% | |
! | AAAGAAGCTTGCAGTTCTGG+AGG | + | chr7_4:42997756-42997775 | None:intergenic | 45.0% |
!!! | CGGGGTGGATTGCTTTTTTT+CGG | + | chr7_4:42997970-42997989 | None:intergenic | 45.0% |
GAATGAGCAGCATGAAGGAA+TGG | + | chr7_4:42998048-42998067 | None:intergenic | 45.0% | |
! | CTGTTACTTGACAGGGATGT+TGG | - | chr7_4:42998127-42998146 | Msa1155150:intron | 45.0% |
GTAGAAAAAGGTTGGGGTCA+AGG | - | chr7_4:42998181-42998200 | Msa1155150:intron | 45.0% | |
GAGAAGTTAGAAGGAAGGGT+TGG | - | chr7_4:42998488-42998507 | Msa1155150:intron | 45.0% | |
ATTCAAGCGGTATCTGACTG+AGG | - | chr7_4:42998570-42998589 | Msa1155150:intron | 45.0% | |
GGATTGTTTGAAGGAGCTCA+AGG | + | chr7_4:42998824-42998843 | None:intergenic | 45.0% | |
CCACTGCCATAAACACTTCT+AGG | + | chr7_4:42998845-42998864 | None:intergenic | 45.0% | |
!! | CCTAGAAGTGTTTATGGCAG+TGG | - | chr7_4:42998842-42998861 | Msa1155150:intron | 45.0% |
! | TTTTTGACCCTTTGTGGTCG+AGG | - | chr7_4:42999024-42999043 | Msa1155150:intron | 45.0% |
TGTATTGCCTCGACCACAAA+GGG | + | chr7_4:42999034-42999053 | None:intergenic | 45.0% | |
ATGTATTGCCTCGACCACAA+AGG | + | chr7_4:42999035-42999054 | None:intergenic | 45.0% | |
!! | GATTTTGGTACTGAAGGACG+TGG | - | chr7_4:42999083-42999102 | Msa1155150:intron | 45.0% |
CAGGAGTTTCCATTGCAAAG+AGG | + | chr7_4:42999261-42999280 | None:intergenic | 45.0% | |
! | GCTTAATGGATGTCAGGTCA+AGG | - | chr7_4:42999613-42999632 | Msa1155150:intron | 45.0% |
TATAAGAACCACACCAGAGG+AGG | - | chr7_4:42999686-42999705 | Msa1155150:intron | 45.0% | |
!! | GGAAAGCATTACACACCAAG+AGG | - | chr7_4:42999837-42999856 | Msa1155150:intron | 45.0% |
CACACCAAGAGGTAAGTGAA+AGG | - | chr7_4:42999848-42999867 | Msa1155150:intron | 45.0% | |
! | GATAAGTTGGATGATGGCCA+TGG | - | chr7_4:43000541-43000560 | Msa1155150:five_prime_UTR | 45.0% |
! | CATGACAAACTGGTGGATAC+TGG | - | chr7_4:43000773-43000792 | Msa1155150:intron | 45.0% |
AGGGCTATGAATGTCAAGGT+GGG | - | chr7_4:43000915-43000934 | Msa1155150:intron | 45.0% | |
TCCGTTTGGCCCTTAAAAGT+TGG | - | chr7_4:43001055-43001074 | Msa1155150:intron | 45.0% | |
!! | GCCAACTTTTAAGGGCCAAA+CGG | + | chr7_4:43001059-43001078 | None:intergenic | 45.0% |
!!! | GAGCATGGGGTTGTTGATTT+TGG | - | chr7_4:43001154-43001173 | Msa1155150:intron | 45.0% |
AGTCTGGCTGATACCTGATA+TGG | - | chr7_4:43001370-43001389 | Msa1155150:intron | 45.0% | |
CATCGCACCTGATATGTCTT+TGG | + | chr7_4:43001446-43001465 | None:intergenic | 45.0% | |
CTTATAGAGGTGGCTAGGAA+GGG | + | chr7_4:43001568-43001587 | None:intergenic | 45.0% | |
CTTCCTAGCCACCTCTATAA+GGG | - | chr7_4:43001567-43001586 | Msa1155150:intron | 45.0% | |
TTCCTAGCCACCTCTATAAG+GGG | - | chr7_4:43001568-43001587 | Msa1155150:intron | 45.0% | |
CTTTCTTCCCCTTATAGAGG+TGG | + | chr7_4:43001578-43001597 | None:intergenic | 45.0% | |
CACCTCTATAAGGGGAAGAA+AGG | - | chr7_4:43001576-43001595 | Msa1155150:intron | 45.0% | |
TATTCCGGGAAAGGGAACTT+TGG | + | chr7_4:43001796-43001815 | None:intergenic | 45.0% | |
TGCAAATGGTTGCTGCAGAT+TGG | - | chr7_4:43002022-43002041 | Msa1155150:five_prime_UTR | 45.0% | |
GACAGAAGGGAAGATGATCT+TGG | - | chr7_4:43002054-43002073 | Msa1155150:five_prime_UTR | 45.0% | |
AGAAGGGAAGATGATCTTGG+TGG | - | chr7_4:43002057-43002076 | Msa1155150:five_prime_UTR | 45.0% | |
!!! | GCAGGTTGACTTTGGTGTTT+TGG | - | chr7_4:43002098-43002117 | Msa1155150:five_prime_UTR | 45.0% |
CTTGCAGAAATATGCAGCAC+AGG | - | chr7_4:43002213-43002232 | Msa1155150:five_prime_UTR | 45.0% | |
AGAAATATGCAGCACAGGGT+GGG | - | chr7_4:43002218-43002237 | Msa1155150:five_prime_UTR | 45.0% | |
GCCTGTCAGGGATATAACTA+TGG | - | chr7_4:43002607-43002626 | Msa1155150:intron | 45.0% | |
GCCATAGTTATATCCCTGAC+AGG | + | chr7_4:43002611-43002630 | None:intergenic | 45.0% | |
! | CTCGGTGTGCAAAACAAAGT+TGG | + | chr7_4:43002639-43002658 | None:intergenic | 45.0% |
!!! | CAACTTTGTTTTGCACACCG+AGG | - | chr7_4:43002637-43002656 | Msa1155150:intron | 45.0% |
!!! | TTTTATTAATATGTTTTATT+TGG | - | chr7_4:42998396-42998415 | Msa1155150:intron | 5.0% |
TTCCTCCCTCTCTTCTCTCA+CGG | - | chr7_4:42996115-42996134 | Msa1155150:three_prime_UTR | 50.0% | |
GGAAACCGTGAGAGAAGAGA+GGG | + | chr7_4:42996123-42996142 | None:intergenic | 50.0% | |
TGGAAACCGTGAGAGAAGAG+AGG | + | chr7_4:42996124-42996143 | None:intergenic | 50.0% | |
GAGAGATGGGAGGAAGAAAG+TGG | + | chr7_4:42996144-42996163 | None:intergenic | 50.0% | |
TCTTCCTCCCATCTCTCTCT+CGG | - | chr7_4:42996147-42996166 | Msa1155150:three_prime_UTR | 50.0% | |
GGGTTCAGTTTGGACAGAAC+TGG | + | chr7_4:42996302-42996321 | None:intergenic | 50.0% | |
GATGGGGTTAGGGTTCAGTT+TGG | + | chr7_4:42996312-42996331 | None:intergenic | 50.0% | |
GTGATAGGAGAAGTTGCTGG+TGG | - | chr7_4:42996464-42996483 | Msa1155150:intron | 50.0% | |
AAAAGGGGAGAAACGGGAAC+GGG | - | chr7_4:42996606-42996625 | Msa1155150:intron | 50.0% | |
AAGAAGAACGGGAACGGGAA+AGG | - | chr7_4:42996632-42996651 | Msa1155150:intron | 50.0% | |
AGAAGAACGGGAACGGGAAA+GGG | - | chr7_4:42996633-42996652 | Msa1155150:intron | 50.0% | |
! | GTTTTTCGCCGCAGTTGTGA+CGG | + | chr7_4:42996659-42996678 | None:intergenic | 50.0% |
ACAACTGCGGCGAAAAACAG+CGG | - | chr7_4:42996661-42996680 | Msa1155150:intron | 50.0% | |
GTTTGGGTAAGAGGGATCTG+AGG | - | chr7_4:42996834-42996853 | Msa1155150:intron | 50.0% | |
TGCATGAGGGATGAGGGAAA+GGG | + | chr7_4:42997042-42997061 | None:intergenic | 50.0% | |
ATGCATGAGGGATGAGGGAA+AGG | + | chr7_4:42997043-42997062 | None:intergenic | 50.0% | |
!! | GGTTTTATGGACTGCTGTGC+TGG | - | chr7_4:42997489-42997508 | Msa1155150:intron | 50.0% |
! | ATGGACTGCTGTGCTGGAAT+TGG | - | chr7_4:42997495-42997514 | Msa1155150:intron | 50.0% |
GTTGTAAACTGTCAACGGGG+TGG | + | chr7_4:42997985-42998004 | None:intergenic | 50.0% | |
TCGGTCAAATATAAGGCCGG+AGG | - | chr7_4:42999435-42999454 | Msa1155150:intron | 50.0% | |
TACGCCTCAGCTCATGGTTA+TGG | - | chr7_4:42999539-42999558 | Msa1155150:intron | 50.0% | |
AGGTCCATAACCATGAGCTG+AGG | + | chr7_4:42999546-42999565 | None:intergenic | 50.0% | |
TGGATATGCAACACCTCCTC+TGG | + | chr7_4:42999702-42999721 | None:intergenic | 50.0% | |
GTCTGGGTTAAGCTGTCCTT+TGG | + | chr7_4:42999749-42999768 | None:intergenic | 50.0% | |
CTTAACCCAGACATTTGCCG+CGG | - | chr7_4:42999757-42999776 | Msa1155150:intron | 50.0% | |
ACACCTGACGAGATACCTGA+GGG | - | chr7_4:43000719-43000738 | Msa1155150:intron | 50.0% | |
AAAGCCAGGTGACAGAGTTG+AGG | - | chr7_4:43000796-43000815 | Msa1155150:five_prime_UTR | 50.0% | |
CAGGGCTATGAATGTCAAGG+TGG | - | chr7_4:43000914-43000933 | Msa1155150:intron | 50.0% | |
GGGGATCAGTCAACAGAAAG+AGG | - | chr7_4:43001186-43001205 | Msa1155150:intron | 50.0% | |
TGGCTAGGAAGGGATAGGTA+AGG | + | chr7_4:43001558-43001577 | None:intergenic | 50.0% | |
CCTTATAGAGGTGGCTAGGA+AGG | + | chr7_4:43001569-43001588 | None:intergenic | 50.0% | |
CCTTCCTAGCCACCTCTATA+AGG | - | chr7_4:43001566-43001585 | Msa1155150:intron | 50.0% | |
TTCCCCTTATAGAGGTGGCT+AGG | + | chr7_4:43001573-43001592 | None:intergenic | 50.0% | |
TCAACCTGCATAATGCTCCC+AGG | + | chr7_4:43002087-43002106 | None:intergenic | 50.0% | |
CAGAAATATGCAGCACAGGG+TGG | - | chr7_4:43002217-43002236 | Msa1155150:five_prime_UTR | 50.0% | |
!!! | CTTTGTTTTGCACACCGAGG+TGG | - | chr7_4:43002640-43002659 | Msa1155150:intron | 50.0% |
AACCGTGAGAGAAGAGAGGG+AGG | + | chr7_4:42996120-42996139 | None:intergenic | 55.0% | |
GGGAACGGGAGGAAGAAGAA+CGG | - | chr7_4:42996620-42996639 | Msa1155150:intron | 55.0% | |
GGAACGGGAGGAAGAAGAAC+GGG | - | chr7_4:42996621-42996640 | Msa1155150:intron | 55.0% | |
GGGAGGAAGAAGAACGGGAA+CGG | - | chr7_4:42996626-42996645 | Msa1155150:intron | 55.0% | |
GGAGGAAGAAGAACGGGAAC+GGG | - | chr7_4:42996627-42996646 | Msa1155150:intron | 55.0% | |
!! | ATGGTGATGGCAGCAAGCTC+TGG | + | chr7_4:42996999-42997018 | None:intergenic | 55.0% |
GCAAGCAGTGTAGAGAGCGA+TGG | - | chr7_4:42998510-42998529 | Msa1155150:intron | 55.0% | |
! | TTGGTACTGAAGGACGTGGC+AGG | - | chr7_4:42999087-42999106 | Msa1155150:intron | 55.0% |
TTGAGCTACGCCTCAGCTCA+TGG | - | chr7_4:42999533-42999552 | Msa1155150:intron | 55.0% | |
ATGCAACACCTCCTCTGGTG+TGG | + | chr7_4:42999697-42999716 | None:intergenic | 55.0% | |
ATCTATGAAGTGGGCAGCCG+CGG | + | chr7_4:42999777-42999796 | None:intergenic | 55.0% | |
GACACCTGACGAGATACCTG+AGG | - | chr7_4:43000718-43000737 | Msa1155150:intron | 55.0% | |
! | CTGGTGGATACTGGAAAGCC+AGG | - | chr7_4:43000782-43000801 | Msa1155150:intron | 55.0% |
CTCACCTCAACTCTGTCACC+TGG | + | chr7_4:43000803-43000822 | None:intergenic | 55.0% | |
AGAGGTGGCTAGGAAGGGAT+AGG | + | chr7_4:43001563-43001582 | None:intergenic | 55.0% | |
CTGGCTCCGTGAGTACAAAG+AGG | + | chr7_4:43001652-43001671 | None:intergenic | 55.0% | |
GAGCCAGTCGTCTAGGTCAA+GGG | - | chr7_4:43001665-43001684 | Msa1155150:intron | 55.0% | |
AGCCAGTCGTCTAGGTCAAG+GGG | - | chr7_4:43001666-43001685 | Msa1155150:intron | 55.0% | |
! | ATGATCTTGGTGGCCGTCCT+GGG | - | chr7_4:43002067-43002086 | Msa1155150:five_prime_UTR | 55.0% |
CCTGCATAATGCTCCCAGGA+CGG | + | chr7_4:43002083-43002102 | None:intergenic | 55.0% | |
GAGAGGGCCGAGAGAGAGAT+GGG | + | chr7_4:42996157-42996176 | None:intergenic | 60.0% | |
TGAGAGGGCCGAGAGAGAGA+TGG | + | chr7_4:42996158-42996177 | None:intergenic | 60.0% | |
GGAAAGGGCCGTCACAACTG+CGG | - | chr7_4:42996648-42996667 | Msa1155150:intron | 60.0% | |
! | GGGATCTGAGGTCGAGAGTG+AGG | - | chr7_4:42996846-42996865 | Msa1155150:intron | 60.0% |
TGAGGTCGAGAGTGAGGCAG+AGG | - | chr7_4:42996852-42996871 | Msa1155150:intron | 60.0% | |
GAGGTCGAGAGTGAGGCAGA+GGG | - | chr7_4:42996853-42996872 | Msa1155150:intron | 60.0% | |
GAGCTGAGGCGTAGCTCAAG+TGG | + | chr7_4:42999532-42999551 | None:intergenic | 60.0% | |
CCTCCCTCAGGTATCTCGTC+AGG | + | chr7_4:43000725-43000744 | None:intergenic | 60.0% | |
CCTGACGAGATACCTGAGGG+AGG | - | chr7_4:43000722-43000741 | Msa1155150:intron | 60.0% | |
ACTCACGGAGCCAGTCGTCT+AGG | - | chr7_4:43001658-43001677 | Msa1155150:intron | 60.0% | |
GGAGCCAGTCGTCTAGGTCA+AGG | - | chr7_4:43001664-43001683 | Msa1155150:intron | 60.0% | |
AGCCCCTTGACCTAGACGAC+TGG | + | chr7_4:43001671-43001690 | None:intergenic | 60.0% | |
! | GATGATCTTGGTGGCCGTCC+TGG | - | chr7_4:43002066-43002085 | Msa1155150:five_prime_UTR | 60.0% |
!! | CCGTCCTGGGAGCATTATGC+AGG | - | chr7_4:43002080-43002099 | Msa1155150:five_prime_UTR | 60.0% |
AGGGCCGAGAGAGAGATGGG+AGG | + | chr7_4:42996154-42996173 | None:intergenic | 65.0% | |
AGGGGAGAAACGGGAACGGG+AGG | - | chr7_4:42996609-42996628 | Msa1155150:intron | 65.0% | |
!! | GAAAAACAGCGGCGCCGGTG+AGG | - | chr7_4:42996672-42996691 | Msa1155150:intron | 65.0% |
GGCAGCCGCGGCAAATGTCT+GGG | + | chr7_4:42999765-42999784 | None:intergenic | 65.0% | |
! | GTGTGAGGCGTTCCTCCCTC+AGG | + | chr7_4:43000737-43000756 | None:intergenic | 65.0% |
GCGGCGAAAAACAGCGGCGC+CGG | - | chr7_4:42996667-42996686 | Msa1155150:intron | 70.0% | |
GGGCAGCCGCGGCAAATGTC+TGG | + | chr7_4:42999766-42999785 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 42996107 | 43002937 | 42996107 | ID=Msa1155150;Name=Msa1155150 |
chr7_4 | mRNA | 42996107 | 43002937 | 42996107 | ID=Msa1155150-mRNA-1;Parent=Msa1155150;Name=Msa1155150-mRNA-1;_AED=0.14;_eAED=0.14;_QI=2169|1|1|1|0.38|0.35|14|267|80 |
chr7_4 | exon | 42996107 | 42996428 | 42996107 | ID=Msa1155150-mRNA-1:exon:10759;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 42996718 | 42996824 | 42996718 | ID=Msa1155150-mRNA-1:exon:10758;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 42996943 | 42997402 | 42996943 | ID=Msa1155150-mRNA-1:exon:10757;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 42997553 | 42997683 | 42997553 | ID=Msa1155150-mRNA-1:exon:10756;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 42997768 | 42997858 | 42997768 | ID=Msa1155150-mRNA-1:exon:10755;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 42998073 | 42998144 | 42998073 | ID=Msa1155150-mRNA-1:exon:10754;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 42998227 | 42998359 | 42998227 | ID=Msa1155150-mRNA-1:exon:10753;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 42999186 | 42999415 | 42999186 | ID=Msa1155150-mRNA-1:exon:10752;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 43000439 | 43000611 | 43000439 | ID=Msa1155150-mRNA-1:exon:10751;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 43000791 | 43000903 | 43000791 | ID=Msa1155150-mRNA-1:exon:10750;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 43001212 | 43001294 | 43001212 | ID=Msa1155150-mRNA-1:exon:10749;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 43002014 | 43002446 | 43002014 | ID=Msa1155150-mRNA-1:exon:10748;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 43002510 | 43002587 | 43002510 | ID=Msa1155150-mRNA-1:exon:10747;Parent=Msa1155150-mRNA-1 |
chr7_4 | exon | 43002685 | 43002937 | 43002685 | ID=Msa1155150-mRNA-1:exon:10746;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 43002685 | 43002937 | 43002685 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 43002510 | 43002587 | 43002510 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 43002014 | 43002446 | 43002014 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 43001212 | 43001294 | 43001212 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 43000791 | 43000903 | 43000791 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 43000439 | 43000611 | 43000439 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 42999186 | 42999415 | 42999186 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 42998227 | 42998359 | 42998227 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 42998073 | 42998144 | 42998073 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 42997768 | 42997858 | 42997768 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 42997553 | 42997683 | 42997553 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | five_prime_UTR | 42997024 | 42997402 | 42997024 | ID=Msa1155150-mRNA-1:five_prime_utr;Parent=Msa1155150-mRNA-1 |
chr7_4 | CDS | 42996943 | 42997023 | 42996943 | ID=Msa1155150-mRNA-1:cds;Parent=Msa1155150-mRNA-1 |
chr7_4 | CDS | 42996718 | 42996824 | 42996718 | ID=Msa1155150-mRNA-1:cds;Parent=Msa1155150-mRNA-1 |
chr7_4 | CDS | 42996374 | 42996428 | 42996374 | ID=Msa1155150-mRNA-1:cds;Parent=Msa1155150-mRNA-1 |
chr7_4 | three_prime_UTR | 42996107 | 42996373 | 42996107 | ID=Msa1155150-mRNA-1:three_prime_utr;Parent=Msa1155150-mRNA-1 |
Gene Sequence |
Protein sequence |