Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276460 | XP_003621754.2 | 90.355 | 197 | 15 | 1 | 45 | 237 | 250 | 446 | 1.07e-118 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276460 | sp|Q9FY99|G6PD2_ARATH | 84.694 | 196 | 26 | 1 | 45 | 236 | 251 | 446 | 8.26e-115 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276460 | G7KUS5 | 90.355 | 197 | 15 | 1 | 45 | 237 | 250 | 446 | 5.11e-119 | 365 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0220800 | Msa0276460 | 0.839093 | 1.947280e-57 | -8.615850e-47 |
| Msa0276460 | Msa0327780 | 0.916202 | 2.365526e-85 | -8.615850e-47 |
| Msa0276460 | Msa0483120 | 0.834994 | 2.171850e-56 | -8.615850e-47 |
| Msa0276460 | Msa0771800 | 0.977522 | 5.996374e-144 | -8.615850e-47 |
| Msa0276460 | Msa1096620 | 0.884551 | 1.740974e-71 | -8.615850e-47 |
| Msa0276460 | Msa1098140 | 0.926306 | 5.622374e-91 | -8.615850e-47 |
| Msa0276460 | Msa1155150 | 0.931019 | 6.999825e-94 | -8.615850e-47 |
| Msa0276460 | Msa1227510 | 0.943576 | 9.379292e-103 | -8.615850e-47 |
| Msa0276460 | Msa1332970 | 0.823933 | 1.060896e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276460 | MtrunA17_Chr7g0222441 | 90.355 | 197 | 15 | 1 | 45 | 237 | 250 | 446 | 9.84e-123 | 365 |
| Msa0276460 | MtrunA17_Chr8g0341321 | 83.249 | 197 | 29 | 1 | 45 | 237 | 237 | 433 | 7.00e-113 | 339 |
| Msa0276460 | MtrunA17_Chr8g0358431 | 79.330 | 179 | 33 | 1 | 45 | 219 | 27 | 205 | 3.36e-98 | 289 |
| Msa0276460 | MtrunA17_Chr7g0228611 | 53.365 | 208 | 87 | 1 | 30 | 237 | 169 | 366 | 5.66e-67 | 219 |
| Msa0276460 | MtrunA17_Chr6g0458971 | 56.853 | 197 | 71 | 2 | 45 | 237 | 183 | 369 | 7.09e-67 | 219 |
| Msa0276460 | MtrunA17_Chr7g0271531 | 48.560 | 243 | 95 | 7 | 9 | 233 | 222 | 452 | 2.45e-60 | 203 |
| Msa0276460 | MtrunA17_Chr8g0356701 | 82.243 | 107 | 19 | 0 | 132 | 238 | 1 | 107 | 6.39e-60 | 188 |
| Msa0276460 | MtrunA17_Chr8g0356771 | 69.784 | 139 | 24 | 2 | 45 | 165 | 27 | 165 | 4.24e-59 | 187 |
| Msa0276460 | MtrunA17_Chr8g0356781 | 71.951 | 82 | 23 | 0 | 167 | 248 | 1 | 82 | 2.82e-35 | 128 |
| Msa0276460 | MtrunA17_Chr4g0035581 | 89.552 | 67 | 7 | 0 | 237 | 303 | 306 | 372 | 2.61e-34 | 133 |
| Msa0276460 | MtrunA17_Chr7g0263661 | 94.595 | 37 | 2 | 0 | 302 | 338 | 723 | 759 | 6.00e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276460 | AT5G13110.1 | 84.694 | 196 | 26 | 1 | 45 | 236 | 251 | 446 | 8.40e-116 | 348 |
| Msa0276460 | AT1G24280.1 | 84.184 | 196 | 27 | 1 | 45 | 236 | 254 | 449 | 8.61e-114 | 342 |
| Msa0276460 | AT5G35790.1 | 79.082 | 196 | 37 | 1 | 45 | 236 | 232 | 427 | 3.57e-107 | 325 |
| Msa0276460 | AT3G27300.1 | 55.288 | 208 | 83 | 1 | 30 | 237 | 170 | 367 | 1.65e-69 | 226 |
| Msa0276460 | AT3G27300.3 | 55.288 | 208 | 83 | 1 | 30 | 237 | 170 | 367 | 1.65e-69 | 226 |
| Msa0276460 | AT3G27300.2 | 55.288 | 208 | 83 | 1 | 30 | 237 | 170 | 367 | 1.65e-69 | 226 |
| Msa0276460 | AT3G27300.5 | 55.288 | 208 | 83 | 1 | 30 | 237 | 224 | 421 | 8.21e-69 | 225 |
| Msa0276460 | AT3G27300.4 | 55.288 | 208 | 83 | 1 | 30 | 237 | 241 | 438 | 1.03e-68 | 225 |
| Msa0276460 | AT5G40760.2 | 53.302 | 212 | 89 | 1 | 26 | 237 | 165 | 366 | 4.54e-68 | 222 |
| Msa0276460 | AT5G40760.1 | 53.302 | 212 | 89 | 1 | 26 | 237 | 165 | 366 | 4.54e-68 | 222 |
| Msa0276460 | AT1G09420.1 | 53.030 | 198 | 76 | 4 | 45 | 237 | 295 | 480 | 1.44e-57 | 197 |
| Msa0276460 | AT1G09420.2 | 50.000 | 208 | 77 | 5 | 45 | 237 | 295 | 490 | 7.04e-54 | 187 |
| Msa0276460 | AT2G16440.1 | 85.075 | 67 | 10 | 0 | 237 | 303 | 313 | 379 | 1.96e-32 | 128 |
| Msa0276460 | AT3G09660.1 | 83.784 | 37 | 6 | 0 | 302 | 338 | 719 | 755 | 1.19e-11 | 66.2 |
| Msa0276460 | AT3G09660.3 | 83.784 | 37 | 6 | 0 | 302 | 338 | 716 | 752 | 1.22e-11 | 66.2 |
Find 123 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTATTGTGAAATCTTTAA+AGG | 0.194309 | 2_3:+8746857 | Msa0276460:three_prime_UTR |
| AGAGTAGAAGAAATGGAATT+AGG | 0.203623 | 2_3:+8741614 | Msa0276460:CDS |
| TTGATATTCTCAGAAGATTT+TGG | 0.217136 | 2_3:+8744004 | Msa0276460:CDS |
| CTCTGGTGTGGTTCTTATAT+TGG | 0.220904 | 2_3:-8744618 | None:intergenic |
| TGTAGGTACTTTGACAATTA+TGG | 0.237604 | 2_3:+8744126 | Msa0276460:intron |
| AGCACATTCTTAAAGTATTC+CGG | 0.250747 | 2_3:-8746743 | None:intergenic |
| GGGCAGCCGCGGCAAATGTC+TGG | 0.287615 | 2_3:-8744699 | None:intergenic |
| TGTGAGAAGAATGTTAAGTT+TGG | 0.298831 | 2_3:+8741552 | None:intergenic |
| GAGTAGAAGAAATGGAATTA+GGG | 0.301865 | 2_3:+8741615 | Msa0276460:CDS |
| TATACCAAAGTTCCCTTTCC+CGG | 0.312780 | 2_3:+8746724 | Msa0276460:three_prime_UTR |
| GAATGTTAAGTTTGGGTAAG+AGG | 0.323759 | 2_3:+8741560 | None:intergenic |
| TAAACAAATTATGAGGCTTC+AGG | 0.348456 | 2_3:+8745629 | Msa0276460:CDS |
| CTTACTATTGCATGACAAAC+TGG | 0.357680 | 2_3:+8745698 | Msa0276460:CDS |
| AGGGAGAAGAGTAGAAGAAA+TGG | 0.359832 | 2_3:+8741607 | Msa0276460:CDS |
| GATGATCTTGGTGGCCGTCC+TGG | 0.359921 | 2_3:+8747006 | Msa0276460:three_prime_UTR |
| ATTCTGAAGCGTGTAGAAAA+AGG | 0.373678 | 2_3:+8743122 | Msa0276460:CDS |
| TCGATGAAAGTATCCATATC+AGG | 0.376038 | 2_3:-8746318 | None:intergenic |
| CATCGCACCTGATATGTCTT+TGG | 0.376310 | 2_3:-8746378 | None:intergenic |
| TATAGAATCGATCACTATCT+TGG | 0.382137 | 2_3:+8743890 | Msa0276460:intron |
| TCCTCTACATCCAAACTAAC+AGG | 0.382610 | 2_3:-8744213 | None:intergenic |
| GTGAGAAGAATGTTAAGTTT+GGG | 0.387565 | 2_3:+8741553 | None:intergenic |
| AGTCTGGCTGATACCTGATA+TGG | 0.388600 | 2_3:+8746305 | Msa0276460:exon |
| AATGGAAACTCCTGTTAGTT+TGG | 0.394148 | 2_3:+8744203 | Msa0276460:CDS |
| GCACATTCTTAAAGTATTCC+GGG | 0.394693 | 2_3:-8746742 | None:intergenic |
| CATGACAAACTGGTGGATAC+TGG | 0.399287 | 2_3:+8745708 | Msa0276460:CDS |
| ACTACATCCTCGAGTTTAAT+CGG | 0.412521 | 2_3:-8744589 | None:intergenic |
| AAAGAAACCTACTTTAGATA+TGG | 0.414269 | 2_3:-8747256 | None:intergenic |
| CTTTGCCTAATTAAAATCAA+TGG | 0.418036 | 2_3:+8747781 | Msa0276460:three_prime_UTR |
| TTGAAGATCAATGCACTTGA+AGG | 0.424310 | 2_3:+8747621 | Msa0276460:three_prime_UTR |
| GCCTGTCAGGGATATAACTA+TGG | 0.426019 | 2_3:+8747547 | Msa0276460:intron |
| TAGTTTCTTTGATCATTCAT+TGG | 0.431004 | 2_3:-8747864 | None:intergenic |
| CTGTTACTTGACAGGGATGT+TGG | 0.431891 | 2_3:+8743080 | Msa0276460:intron |
| ATCAGGTGACTGGTATATAC+AGG | 0.439760 | 2_3:+8745830 | Msa0276460:intron |
| GTCTGGGTTAAGCTGTCCTT+TGG | 0.440910 | 2_3:-8744682 | None:intergenic |
| TTGTAATTGTATATAACCTT+AGG | 0.442094 | 2_3:+8747744 | Msa0276460:three_prime_UTR |
| TTACTGATAAACAAATTATG+AGG | 0.445606 | 2_3:+8745622 | Msa0276460:CDS |
| TCATCGAATATGCAATTTCA+AGG | 0.456985 | 2_3:+8746783 | Msa0276460:three_prime_UTR |
| ATGATCTTGGTGGCCGTCCT+GGG | 0.462970 | 2_3:+8747007 | Msa0276460:three_prime_UTR |
| TGGATATGCAACACCTCCTC+TGG | 0.463674 | 2_3:-8744635 | None:intergenic |
| CTCGGTGTGCAAAACAAAGT+TGG | 0.468884 | 2_3:-8747576 | None:intergenic |
| AAAATGACCAAAGACATATC+AGG | 0.473238 | 2_3:+8746371 | Msa0276460:three_prime_UTR |
| CCTCCCTCAGGTATCTCGTC+AGG | 0.476130 | 2_3:-8745657 | None:intergenic |
| ATCGAAAATTTAAACAGCGT+TGG | 0.484696 | 2_3:+8746336 | Msa0276460:three_prime_UTR |
| AATGTTAAGTTTGGGTAAGA+GGG | 0.484956 | 2_3:+8741561 | None:intergenic |
| TTCTTAAAGTATTCCGGGAA+AGG | 0.486184 | 2_3:-8746737 | None:intergenic |
| TCTTAAAGTATTCCGGGAAA+GGG | 0.490143 | 2_3:-8746736 | None:intergenic |
| GTCATGATCTTAAGAAAAGA+AGG | 0.490748 | 2_3:-8747229 | None:intergenic |
| CTTCATAGATAATGCAAGAT+GGG | 0.490793 | 2_3:+8744723 | Msa0276460:CDS |
| CTTGCAGAAATATGCAGCAC+AGG | 0.492843 | 2_3:+8747153 | Msa0276460:intron |
| TCCTGTTAGTTTGGATGTAG+AGG | 0.492884 | 2_3:+8744212 | Msa0276460:CDS |
| TCGGTGTGCAAAACAAAGTT+GGG | 0.496240 | 2_3:-8747575 | None:intergenic |
| AATACTAATCCTCTTTGCAA+TGG | 0.502448 | 2_3:+8744185 | Msa0276460:CDS |
| CATCGAATATGCAATTTCAA+GGG | 0.504570 | 2_3:+8746784 | Msa0276460:three_prime_UTR |
| AGAGGACATTAGAAATGAAA+AGG | 0.504615 | 2_3:+8744230 | Msa0276460:CDS |
| TATTCCGGGAAAGGGAACTT+TGG | 0.505318 | 2_3:-8746728 | None:intergenic |
| GACAGAAGGGAAGATGATCT+TGG | 0.506460 | 2_3:+8746994 | Msa0276460:three_prime_UTR |
| TGAGGTCGAGAGTGAGGCAG+AGG | 0.506694 | 2_3:+8741587 | Msa0276460:CDS |
| GAGCCAGTCGTCTAGGTCAA+GGG | 0.508608 | 2_3:+8746600 | Msa0276460:three_prime_UTR |
| GACTTAACAGTTCTCTGAGT+TGG | 0.513256 | 2_3:-8745874 | None:intergenic |
| TTAAGAAAAGAAGGATTCAA+AGG | 0.515731 | 2_3:-8747220 | None:intergenic |
| GGGAACTTTGGTATAAGATA+AGG | 0.516378 | 2_3:-8746716 | None:intergenic |
| CCGTCCTGGGAGCATTATGC+AGG | 0.517123 | 2_3:+8747020 | Msa0276460:three_prime_UTR |
| TAGATAATGCAAGATGGGAT+GGG | 0.518772 | 2_3:+8744728 | Msa0276460:CDS |
| CTGGTGGATACTGGAAAGCC+AGG | 0.518819 | 2_3:+8745717 | Msa0276460:CDS |
| GGCAGCCGCGGCAAATGTCT+GGG | 0.520346 | 2_3:-8744698 | None:intergenic |
| GTGTGAGGCGTTCCTCCCTC+AGG | 0.520495 | 2_3:-8745669 | None:intergenic |
| TGTATTGCCTCGACCACAAA+GGG | 0.520587 | 2_3:-8743967 | None:intergenic |
| ATCTATGAAGTGGGCAGCCG+CGG | 0.523740 | 2_3:-8744710 | None:intergenic |
| CTATCTTGGAAAAGAGCTTG+TGG | 0.529498 | 2_3:+8743904 | Msa0276460:CDS |
| TTTGTTGTACATCAGGTGAC+TGG | 0.533031 | 2_3:+8745820 | Msa0276460:intron |
| GGAGCCAGTCGTCTAGGTCA+AGG | 0.534034 | 2_3:+8746599 | Msa0276460:three_prime_UTR |
| TAAGAAAAGAAGGATTCAAA+GGG | 0.534209 | 2_3:-8747219 | None:intergenic |
| AGGCAACTTATAATTGCCTA+AGG | 0.535020 | 2_3:-8747760 | None:intergenic |
| TCTATAGCTGCAAATTGAAG+TGG | 0.536075 | 2_3:-8747711 | None:intergenic |
| TATTATCCTCTTTGTACTCA+CGG | 0.536920 | 2_3:+8746578 | Msa0276460:three_prime_UTR |
| CTCACCTCAACTCTGTCACC+TGG | 0.549979 | 2_3:-8745735 | None:intergenic |
| ATCTTGCATTATCTATGAAG+TGG | 0.550073 | 2_3:-8744720 | None:intergenic |
| ATAGATAATGCAAGATGGGA+TGG | 0.550173 | 2_3:+8744727 | Msa0276460:CDS |
| GGGGATCAGTCAACAGAAAG+AGG | 0.551550 | 2_3:+8746121 | Msa0276460:CDS |
| TTGGTACTGAAGGACGTGGC+AGG | 0.552068 | 2_3:+8744023 | Msa0276460:CDS |
| ACTCACGGAGCCAGTCGTCT+AGG | 0.565978 | 2_3:+8746593 | Msa0276460:three_prime_UTR |
| AGAAATATGCAGCACAGGGT+GGG | 0.567302 | 2_3:+8747158 | Msa0276460:intron |
| GGGATCTGAGGTCGAGAGTG+AGG | 0.568002 | 2_3:+8741581 | Msa0276460:CDS |
| TCTTAATAAGCAATCAGAGC+TGG | 0.569488 | 2_3:+8746163 | Msa0276460:CDS |
| AGCCCCTTGACCTAGACGAC+TGG | 0.570287 | 2_3:-8746603 | None:intergenic |
| ATGCAACACCTCCTCTGGTG+TGG | 0.571539 | 2_3:-8744630 | None:intergenic |
| CAGGAGTTTCCATTGCAAAG+AGG | 0.576414 | 2_3:-8744194 | None:intergenic |
| ACTTCATAGATAATGCAAGA+TGG | 0.584523 | 2_3:+8744722 | Msa0276460:CDS |
| ATTGGTTGAGATCTGACAGA+AGG | 0.589843 | 2_3:+8746980 | Msa0276460:three_prime_UTR |
| CAGAAATATGCAGCACAGGG+TGG | 0.591099 | 2_3:+8747157 | Msa0276460:intron |
| AGATAATGCAAGATGGGATG+GGG | 0.599941 | 2_3:+8744729 | Msa0276460:CDS |
| TTGGTTGAGATCTGACAGAA+GGG | 0.602460 | 2_3:+8746981 | Msa0276460:three_prime_UTR |
| TCAAACAAACCTCTATAGAG+TGG | 0.603888 | 2_3:-8746414 | None:intergenic |
| GAGGTCGAGAGTGAGGCAGA+GGG | 0.604687 | 2_3:+8741588 | Msa0276460:CDS |
| TGATGACAAAACTGTACCAA+AGG | 0.605343 | 2_3:+8744666 | Msa0276460:CDS |
| CTTTAACAAGATCATTCAAG+CGG | 0.617914 | 2_3:+8743507 | Msa0276460:CDS |
| AGCCAGTCGTCTAGGTCAAG+GGG | 0.618083 | 2_3:+8746601 | Msa0276460:three_prime_UTR |
| TCAACCTGCATAATGCTCCC+AGG | 0.618526 | 2_3:-8747024 | None:intergenic |
| TCTTGCATTATCTATGAAGT+GGG | 0.621537 | 2_3:-8744719 | None:intergenic |
| ATCGAATATGCAATTTCAAG+GGG | 0.629980 | 2_3:+8746785 | Msa0276460:three_prime_UTR |
| TATAAGAACCACACCAGAGG+AGG | 0.636996 | 2_3:+8744622 | Msa0276460:CDS |
| AAAGCCAGGTGACAGAGTTG+AGG | 0.641668 | 2_3:+8745731 | Msa0276460:CDS |
| TTGTTGCTAATCTTCCACCT+CGG | 0.643102 | 2_3:-8747594 | None:intergenic |
| ATGTATTGCCTCGACCACAA+AGG | 0.643641 | 2_3:-8743968 | None:intergenic |
| ACTATTGCATGACAAACTGG+TGG | 0.645480 | 2_3:+8745701 | Msa0276460:CDS |
| ATACAGGGCTATGAATGTCA+AGG | 0.646972 | 2_3:+8745846 | Msa0276460:CDS |
| TATGAGACCGATTAAACTCG+AGG | 0.649881 | 2_3:+8744582 | Msa0276460:CDS |
| TTGCAGAAATATGCAGCACA+GGG | 0.650088 | 2_3:+8747154 | Msa0276460:intron |
| CCTGCATAATGCTCCCAGGA+CGG | 0.650448 | 2_3:-8747020 | None:intergenic |
| GTTTGGGTAAGAGGGATCTG+AGG | 0.652283 | 2_3:+8741569 | Msa0276460:CDS |
| CAGGGCTATGAATGTCAAGG+TGG | 0.661008 | 2_3:+8745849 | Msa0276460:CDS |
| TCAGGTGACTGGTATATACA+GGG | 0.661864 | 2_3:+8745831 | Msa0276460:intron |
| AATAGTAAGCTAACAGTGTG+AGG | 0.667908 | 2_3:-8745684 | None:intergenic |
| GGAAAGCATTACACACCAAG+AGG | 0.670420 | 2_3:+8744773 | Msa0276460:CDS |
| AGGGCTATGAATGTCAAGGT+GGG | 0.671069 | 2_3:+8745850 | Msa0276460:CDS |
| AGAAGGGAAGATGATCTTGG+TGG | 0.671197 | 2_3:+8746997 | Msa0276460:three_prime_UTR |
| CAATATAAGAACCACACCAG+AGG | 0.676256 | 2_3:+8744619 | Msa0276460:CDS |
| CTTAACCCAGACATTTGCCG+CGG | 0.676329 | 2_3:+8744693 | Msa0276460:CDS |
| CTGGCTCCGTGAGTACAAAG+AGG | 0.684019 | 2_3:-8746584 | None:intergenic |
| GACACCTGACGAGATACCTG+AGG | 0.684151 | 2_3:+8745653 | Msa0276460:CDS |
| ACACCTGACGAGATACCTGA+GGG | 0.690721 | 2_3:+8745654 | Msa0276460:CDS |
| ATTCAAGCGGTATCTGACTG+AGG | 0.705680 | 2_3:+8743520 | Msa0276460:CDS |
| CCTGACGAGATACCTGAGGG+AGG | 0.736290 | 2_3:+8745657 | Msa0276460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAACTAAAGAAAAATTA+GGG | + | chr2_3:8741652-8741671 | Msa0276460:intron | 15.0% |
| !! | TAATCTAAATCAACTAATTT+AGG | + | chr2_3:8741797-8741816 | Msa0276460:intron | 15.0% |
| !! | AATCTAAATCAACTAATTTA+GGG | + | chr2_3:8741798-8741817 | Msa0276460:intron | 15.0% |
| !! | ATTCTTATTGTATATGAAAA+AGG | + | chr2_3:8742015-8742034 | Msa0276460:intron | 15.0% |
| !!! | ATTGATTTTGAATTTTTAGA+CGG | + | chr2_3:8742113-8742132 | Msa0276460:intron | 15.0% |
| !! | TATAACTTACATATTTGAAA+TGG | - | chr2_3:8742886-8742905 | None:intergenic | 15.0% |
| !!! | TGGTTATATACTTTTTTTAT+AGG | + | chr2_3:8744260-8744279 | Msa0276460:intron | 15.0% |
| !!! | ATTTAAAACAGATGAATTAA+AGG | - | chr2_3:8744502-8744521 | None:intergenic | 15.0% |
| !!! | TTCTTATTTTATATCAAATG+AGG | - | chr2_3:8745055-8745074 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGCTAAATTAGA+CGG | + | chr2_3:8745342-8745361 | Msa0276460:intron | 15.0% |
| !! | AATAATTATTTAAACTGTAC+TGG | + | chr2_3:8745441-8745460 | Msa0276460:intron | 15.0% |
| !! | ATAATTATTTAAACTGTACT+GGG | + | chr2_3:8745442-8745461 | Msa0276460:intron | 15.0% |
| !! | ATCAATATATTTATCATACA+AGG | - | chr2_3:8746069-8746088 | None:intergenic | 15.0% |
| !! | ATATATAAGTAATTACTTGA+TGG | - | chr2_3:8747087-8747106 | None:intergenic | 15.0% |
| !! | TTCATAGCTATTATTATATT+TGG | + | chr2_3:8747449-8747468 | Msa0276460:intron | 15.0% |
| !! | GAAGTAACTAAAGAAAAATT+AGG | + | chr2_3:8741651-8741670 | Msa0276460:intron | 20.0% |
| !! | AGTAACTAAAGAAAAATTAG+GGG | + | chr2_3:8741653-8741672 | Msa0276460:intron | 20.0% |
| !! | ATCTAAATCAACTAATTTAG+GGG | + | chr2_3:8741799-8741818 | Msa0276460:intron | 20.0% |
| !!! | TTGATTTTGAATTTTTAGAC+GGG | + | chr2_3:8742114-8742133 | Msa0276460:intron | 20.0% |
| !! | GAAATTGATTACTTTGAATT+TGG | + | chr2_3:8742287-8742306 | Msa0276460:intron | 20.0% |
| !! | ATTACTTTGAATTTGGATAT+GGG | + | chr2_3:8742294-8742313 | Msa0276460:intron | 20.0% |
| !!! | ATCTAAGATTTGATATGTTA+TGG | + | chr2_3:8742583-8742602 | Msa0276460:intron | 20.0% |
| !! | ATATTTGTTTATACGCTTAA+AGG | - | chr2_3:8742663-8742682 | None:intergenic | 20.0% |
| !! | TACCAAACTAAATATAAACA+TGG | + | chr2_3:8742904-8742923 | Msa0276460:intron | 20.0% |
| !! | ATCCATGTTTATATTTAGTT+TGG | - | chr2_3:8742909-8742928 | None:intergenic | 20.0% |
| !! | AAAATTTCCAAGATAATATC+CGG | - | chr2_3:8742932-8742951 | None:intergenic | 20.0% |
| !! | CAAAATAAAAAAAAGTGACA+GGG | - | chr2_3:8743048-8743067 | None:intergenic | 20.0% |
| !! | TCAAAATAAAAAAAAGTGAC+AGG | - | chr2_3:8743049-8743068 | None:intergenic | 20.0% |
| !!! | AATGATTTTCTTGATTACTA+AGG | + | chr2_3:8743185-8743204 | Msa0276460:intron | 20.0% |
| !! | TTATTTGGTATGATGATTAA+AGG | + | chr2_3:8743361-8743380 | Msa0276460:intron | 20.0% |
| !!! | TCTATTTTCATAAGCTATAT+TGG | + | chr2_3:8743693-8743712 | Msa0276460:intron | 20.0% |
| !!! | GTAAAGTGCTTTATTTAAAA+TGG | + | chr2_3:8743858-8743877 | Msa0276460:intron | 20.0% |
| !! | CAAAAATTAGATTTGAGAAT+CGG | - | chr2_3:8743946-8743965 | None:intergenic | 20.0% |
| !!! | CACTTTTTATGATCTTAAAA+TGG | + | chr2_3:8744072-8744091 | Msa0276460:intron | 20.0% |
| !!! | TTTCTACTTATATTTAAGGT+CGG | - | chr2_3:8744316-8744335 | None:intergenic | 20.0% |
| !! | AACCTTTCTACTTATATTTA+AGG | - | chr2_3:8744320-8744339 | None:intergenic | 20.0% |
| !!! | GATACTTTATTTAGTACAAA+AGG | - | chr2_3:8744918-8744937 | None:intergenic | 20.0% |
| !! | TTGACTTTGATGTTATATAT+TGG | - | chr2_3:8744942-8744961 | None:intergenic | 20.0% |
| !!! | AGATTTTTAAGTATTTGAGA+TGG | + | chr2_3:8745227-8745246 | Msa0276460:intron | 20.0% |
| !! | AAAACACATTGTTCAAAATA+GGG | - | chr2_3:8745510-8745529 | None:intergenic | 20.0% |
| !!! | AACATATCTTTTCTAATTTC+AGG | + | chr2_3:8745598-8745617 | Msa0276460:intron | 20.0% |
| !! | TTACTGATAAACAAATTATG+AGG | + | chr2_3:8745622-8745641 | Msa0276460:CDS | 20.0% |
| !! | ATAAATATATTGATGAGCAT+GGG | + | chr2_3:8746075-8746094 | Msa0276460:intron | 20.0% |
| !!! | TATGTGTTGTTTAATTTTTC+AGG | + | chr2_3:8746274-8746293 | Msa0276460:intron | 20.0% |
| !!! | GAAGAAAGGTTTTAAAATTT+TGG | + | chr2_3:8746525-8746544 | Msa0276460:intron | 20.0% |
| !! | AAATCCATGATTTACTAAAA+AGG | - | chr2_3:8747330-8747349 | None:intergenic | 20.0% |
| !! | TTAACAGTAAAAGATTAGAA+TGG | - | chr2_3:8747490-8747509 | None:intergenic | 20.0% |
| !! | TTGTAATTGTATATAACCTT+AGG | + | chr2_3:8747744-8747763 | Msa0276460:three_prime_UTR | 20.0% |
| !!! | TGAATCCATTGATTTTAATT+AGG | - | chr2_3:8747789-8747808 | None:intergenic | 20.0% |
| !!! | CATATCAATTTTTCTTAACT+GGG | - | chr2_3:8747844-8747863 | None:intergenic | 20.0% |
| ! | TTGATTTAGATTATGCATGA+GGG | - | chr2_3:8741790-8741809 | None:intergenic | 25.0% |
| ! | ATTCAATCAAATTATTCCAG+TGG | - | chr2_3:8741977-8741996 | None:intergenic | 25.0% |
| ! | ACTGGAATAATTTGATTGAA+TGG | + | chr2_3:8741976-8741995 | Msa0276460:intron | 25.0% |
| ! | CTGGAATAATTTGATTGAAT+GGG | + | chr2_3:8741977-8741996 | Msa0276460:intron | 25.0% |
| !!! | ATTTGATTGAATGGGTTTTA+TGG | + | chr2_3:8741985-8742004 | Msa0276460:intron | 25.0% |
| ! | CATATGAATGATTCAATCAT+AGG | + | chr2_3:8742203-8742222 | Msa0276460:intron | 25.0% |
| !! | TGATTCAATCATAGGTTTTA+TGG | + | chr2_3:8742211-8742230 | Msa0276460:intron | 25.0% |
| ! | GATTACTTTGAATTTGGATA+TGG | + | chr2_3:8742293-8742312 | Msa0276460:intron | 25.0% |
| ! | ATTGAGTGAATTATATGTTC+AGG | + | chr2_3:8742464-8742483 | Msa0276460:intron | 25.0% |
| !! | AACCTTTTTATTCACTATGT+TGG | - | chr2_3:8742552-8742571 | None:intergenic | 25.0% |
| ! | ACTAAATATAAACATGGATC+CGG | + | chr2_3:8742910-8742929 | Msa0276460:intron | 25.0% |
| !! | TCAAGAAAATCATTCTTTTG+AGG | - | chr2_3:8743179-8743198 | None:intergenic | 25.0% |
| ! | ATGATTAAAGGAAACTGATA+AGG | + | chr2_3:8743373-8743392 | Msa0276460:intron | 25.0% |
| ! | ACTTATATGATAAGTGTGAA+TGG | - | chr2_3:8743607-8743626 | None:intergenic | 25.0% |
| !! | TTGATATTCTCAGAAGATTT+TGG | + | chr2_3:8744004-8744023 | Msa0276460:CDS | 25.0% |
| ! | GACCTTAAATATAAGTAGAA+AGG | + | chr2_3:8744315-8744334 | Msa0276460:intron | 25.0% |
| !! | ACAAATACATGTACCTTTTT+CGG | + | chr2_3:8744352-8744371 | Msa0276460:intron | 25.0% |
| ! | ACTTTCTTCTCAAAATCATT+TGG | + | chr2_3:8744428-8744447 | Msa0276460:intron | 25.0% |
| ! | CTTTCTTCTCAAAATCATTT+GGG | + | chr2_3:8744429-8744448 | Msa0276460:intron | 25.0% |
| ! | ATAACATCAAAGTCAATAGT+AGG | + | chr2_3:8744946-8744965 | Msa0276460:intron | 25.0% |
| !! | TCTCAATGACTACAAAATTT+TGG | + | chr2_3:8745015-8745034 | Msa0276460:intron | 25.0% |
| !!! | CTTGTTATTATGCATCATAT+AGG | - | chr2_3:8745197-8745216 | None:intergenic | 25.0% |
| ! | TAAAAGAGATGGGAAAATAT+TGG | - | chr2_3:8745260-8745279 | None:intergenic | 25.0% |
| ! | AAACACATTGTTCAAAATAG+GGG | - | chr2_3:8745509-8745528 | None:intergenic | 25.0% |
| ! | CAAAACACATTGTTCAAAAT+AGG | - | chr2_3:8745511-8745530 | None:intergenic | 25.0% |
| !!! | CTATTTTGAACAATGTGTTT+TGG | + | chr2_3:8745509-8745528 | Msa0276460:intron | 25.0% |
| ! | ATATTCTCATGTTTGTTCAA+TGG | + | chr2_3:8745785-8745804 | Msa0276460:intron | 25.0% |
| ! | GATTCATTTCATTGTTCTAA+AGG | + | chr2_3:8746016-8746035 | Msa0276460:intron | 25.0% |
| ! | GATAAATATATTGATGAGCA+TGG | + | chr2_3:8746074-8746093 | Msa0276460:intron | 25.0% |
| ! | TAAATATATTGATGAGCATG+GGG | + | chr2_3:8746076-8746095 | Msa0276460:intron | 25.0% |
| ! | TGTTTAAGAATCCGAAAAAA+GGG | + | chr2_3:8746689-8746708 | Msa0276460:three_prime_UTR | 25.0% |
| ! | CTGTATTGTGAAATCTTTAA+AGG | + | chr2_3:8746857-8746876 | Msa0276460:three_prime_UTR | 25.0% |
| ! | GAAAAAAATCTGATTGGTAA+AGG | - | chr2_3:8746891-8746910 | None:intergenic | 25.0% |
| ! | GTGAATGAAAAAAATCTGAT+TGG | - | chr2_3:8746897-8746916 | None:intergenic | 25.0% |
| ! | CATAAAAGCAAATAGATAAG+TGG | - | chr2_3:8746944-8746963 | None:intergenic | 25.0% |
| !!! | TCTATTTGCTTTTATGCAAA+TGG | + | chr2_3:8746948-8746967 | Msa0276460:intron | 25.0% |
| ! | ATGTTTACAATGAAAAACTC+AGG | - | chr2_3:8747184-8747203 | None:intergenic | 25.0% |
| !! | TTTTTCATTGTAAACATCTG+TGG | + | chr2_3:8747187-8747206 | Msa0276460:three_prime_UTR | 25.0% |
| ! | TAAGAAAAGAAGGATTCAAA+GGG | - | chr2_3:8747222-8747241 | None:intergenic | 25.0% |
| ! | TTAAGAAAAGAAGGATTCAA+AGG | - | chr2_3:8747223-8747242 | None:intergenic | 25.0% |
| ! | AAAGAAACCTACTTTAGATA+TGG | - | chr2_3:8747259-8747278 | None:intergenic | 25.0% |
| !!! | CTTTCCTTTTTAGTAAATCA+TGG | + | chr2_3:8747323-8747342 | Msa0276460:intron | 25.0% |
| ! | TTAATCATGAAATTGCAAGT+TGG | + | chr2_3:8747348-8747367 | Msa0276460:intron | 25.0% |
| !!! | CTTTGAAATTGGCATAATTT+CGG | + | chr2_3:8747382-8747401 | Msa0276460:intron | 25.0% |
| ! | AATTAATCAAAGTTCTCAAG+TGG | + | chr2_3:8747411-8747430 | Msa0276460:intron | 25.0% |
| !!! | CATTGATTTTAATTAGGCAA+AGG | - | chr2_3:8747783-8747802 | None:intergenic | 25.0% |
| ! | CTTTGCCTAATTAAAATCAA+TGG | + | chr2_3:8747781-8747800 | Msa0276460:three_prime_UTR | 25.0% |
| !! | GCATATCAATTTTTCTTAAC+TGG | - | chr2_3:8747845-8747864 | None:intergenic | 25.0% |
| AGAGTAGAAGAAATGGAATT+AGG | + | chr2_3:8741614-8741633 | Msa0276460:CDS | 30.0% | |
| GAGTAGAAGAAATGGAATTA+GGG | + | chr2_3:8741615-8741634 | Msa0276460:CDS | 30.0% | |
| CCTTTAATTCTTTATGGTGA+TGG | - | chr2_3:8741747-8741766 | None:intergenic | 30.0% | |
| CCATCACCATAAAGAATTAA+AGG | + | chr2_3:8741744-8741763 | Msa0276460:intron | 30.0% | |
| TCACCATAAAGAATTAAAGG+TGG | + | chr2_3:8741747-8741766 | Msa0276460:intron | 30.0% | |
| CACCATAAAGAATTAAAGGT+GGG | + | chr2_3:8741748-8741767 | Msa0276460:intron | 30.0% | |
| AACCCACCTTTAATTCTTTA+TGG | - | chr2_3:8741753-8741772 | None:intergenic | 30.0% | |
| ! | GTTGATTTAGATTATGCATG+AGG | - | chr2_3:8741791-8741810 | None:intergenic | 30.0% |
| TGAATGATAGCATGATTGAA+AGG | + | chr2_3:8741938-8741957 | Msa0276460:intron | 30.0% | |
| GGAGATTATAAAAATGAGCT+AGG | + | chr2_3:8742036-8742055 | Msa0276460:intron | 30.0% | |
| !! | TTTATTGCAGCAGTTGATAA+AGG | + | chr2_3:8742510-8742529 | Msa0276460:intron | 30.0% |
| TGCCAACATAGTGAATAAAA+AGG | + | chr2_3:8742547-8742566 | Msa0276460:intron | 30.0% | |
| TCTCGCATAAACATATATGT+TGG | + | chr2_3:8742757-8742776 | Msa0276460:intron | 30.0% | |
| ! | TCTTTGAAAGAGTTGCTTTA+TGG | + | chr2_3:8742825-8742844 | Msa0276460:intron | 30.0% |
| !! | AATGTTTTCTGTTACTTGAC+AGG | + | chr2_3:8743072-8743091 | Msa0276460:intron | 30.0% |
| !! | ATGTTTTCTGTTACTTGACA+GGG | + | chr2_3:8743073-8743092 | Msa0276460:intron | 30.0% |
| !!! | TTTGTTTTGTTGTTTGACTG+TGG | + | chr2_3:8743249-8743268 | Msa0276460:intron | 30.0% |
| TTAAAGGAAACTGATAAGGT+TGG | + | chr2_3:8743377-8743396 | Msa0276460:intron | 30.0% | |
| AGCAATATGGTGAAAGAAAA+TGG | + | chr2_3:8743403-8743422 | Msa0276460:intron | 30.0% | |
| GCAATATGGTGAAAGAAAAT+GGG | + | chr2_3:8743404-8743423 | Msa0276460:intron | 30.0% | |
| CTTTAACAAGATCATTCAAG+CGG | + | chr2_3:8743507-8743526 | Msa0276460:CDS | 30.0% | |
| TAATTAGACCATGTTTGGAT+TGG | - | chr2_3:8743819-8743838 | None:intergenic | 30.0% | |
| ACAGATAATTAGACCATGTT+TGG | - | chr2_3:8743824-8743843 | None:intergenic | 30.0% | |
| TATAGAATCGATCACTATCT+TGG | + | chr2_3:8743890-8743909 | Msa0276460:intron | 30.0% | |
| ! | ATCTAATTTTTGACCCTTTG+TGG | + | chr2_3:8743954-8743973 | Msa0276460:CDS | 30.0% |
| ! | AAAAAGTGTAAATGCTGCAA+AGG | - | chr2_3:8744060-8744079 | None:intergenic | 30.0% |
| TGTAGGTACTTTGACAATTA+TGG | + | chr2_3:8744126-8744145 | Msa0276460:intron | 30.0% | |
| AATACTAATCCTCTTTGCAA+TGG | + | chr2_3:8744185-8744204 | Msa0276460:CDS | 30.0% | |
| AGAGGACATTAGAAATGAAA+AGG | + | chr2_3:8744230-8744249 | Msa0276460:CDS | 30.0% | |
| AGAAATGAAAAGGTCTCATA+TGG | + | chr2_3:8744240-8744259 | Msa0276460:intron | 30.0% | |
| ! | TACTTATATTTAAGGTCGGA+GGG | - | chr2_3:8744312-8744331 | None:intergenic | 30.0% |
| !!! | ACCTTTTTCGGTCAAATATA+AGG | + | chr2_3:8744364-8744383 | Msa0276460:intron | 30.0% |
| CATGACTTTCAATTGCTTAA+TGG | + | chr2_3:8744535-8744554 | Msa0276460:intron | 30.0% | |
| !! | TACAGTTTTGTCATCAATGT+AGG | - | chr2_3:8744662-8744681 | None:intergenic | 30.0% |
| TCTTGCATTATCTATGAAGT+GGG | - | chr2_3:8744722-8744741 | None:intergenic | 30.0% | |
| ATCTTGCATTATCTATGAAG+TGG | - | chr2_3:8744723-8744742 | None:intergenic | 30.0% | |
| ACTTCATAGATAATGCAAGA+TGG | + | chr2_3:8744722-8744741 | Msa0276460:CDS | 30.0% | |
| CTTCATAGATAATGCAAGAT+GGG | + | chr2_3:8744723-8744742 | Msa0276460:CDS | 30.0% | |
| TGTATTCTGTATTGTGACAT+TGG | - | chr2_3:8744994-8745013 | None:intergenic | 30.0% | |
| TAACCAAGAAACACTTATTC+TGG | - | chr2_3:8745320-8745339 | None:intergenic | 30.0% | |
| !! | GGTAGATTTTAGTGATAAGT+TGG | + | chr2_3:8745463-8745482 | Msa0276460:intron | 30.0% |
| ! | TTTAGTGATAAGTTGGATGA+TGG | + | chr2_3:8745470-8745489 | Msa0276460:intron | 30.0% |
| !!! | TGGATTTTAGTTCATAAACC+TGG | + | chr2_3:8745564-8745583 | Msa0276460:intron | 30.0% |
| ATATGTTAATTGCAGTTTCC+AGG | - | chr2_3:8745585-8745604 | None:intergenic | 30.0% | |
| TAAACAAATTATGAGGCTTC+AGG | + | chr2_3:8745629-8745648 | Msa0276460:CDS | 30.0% | |
| ! | ATCTATTTATCAGAGTGTCA+TGG | - | chr2_3:8745767-8745786 | None:intergenic | 30.0% |
| ATGTACAACAAAACACTCAT+GGG | - | chr2_3:8745812-8745831 | None:intergenic | 30.0% | |
| AGACAAGATGAAAAATGCAA+AGG | - | chr2_3:8745952-8745971 | None:intergenic | 30.0% | |
| ! | TGAATCATGCCAACTTTTAA+GGG | - | chr2_3:8746002-8746021 | None:intergenic | 30.0% |
| ! | ATGAATCATGCCAACTTTTA+AGG | - | chr2_3:8746003-8746022 | None:intergenic | 30.0% |
| ! | AAAATGTGTTGCTATCATGA+AGG | + | chr2_3:8746040-8746059 | Msa0276460:intron | 30.0% |
| AACAATTGACAACAAATGCA+GGG | - | chr2_3:8746234-8746253 | None:intergenic | 30.0% | |
| AAACAATTGACAACAAATGC+AGG | - | chr2_3:8746235-8746254 | None:intergenic | 30.0% | |
| !! | TTTTCAGGAAATATACAGTC+TGG | + | chr2_3:8746289-8746308 | Msa0276460:intron | 30.0% |
| ATCGAAAATTTAAACAGCGT+TGG | + | chr2_3:8746336-8746355 | Msa0276460:three_prime_UTR | 30.0% | |
| AAAATGACCAAAGACATATC+AGG | + | chr2_3:8746371-8746390 | Msa0276460:three_prime_UTR | 30.0% | |
| AGAGTTGCACATTAATAAGA+TGG | - | chr2_3:8746446-8746465 | None:intergenic | 30.0% | |
| TATTATCCTCTTTGTACTCA+CGG | + | chr2_3:8746578-8746597 | Msa0276460:three_prime_UTR | 30.0% | |
| GTGTTTAAGAATCCGAAAAA+AGG | + | chr2_3:8746688-8746707 | Msa0276460:three_prime_UTR | 30.0% | |
| ! | AGCACATTCTTAAAGTATTC+CGG | - | chr2_3:8746746-8746765 | None:intergenic | 30.0% |
| TCATCGAATATGCAATTTCA+AGG | + | chr2_3:8746783-8746802 | Msa0276460:three_prime_UTR | 30.0% | |
| CATCGAATATGCAATTTCAA+GGG | + | chr2_3:8746784-8746803 | Msa0276460:three_prime_UTR | 30.0% | |
| ATCGAATATGCAATTTCAAG+GGG | + | chr2_3:8746785-8746804 | Msa0276460:three_prime_UTR | 30.0% | |
| AGCAAATAGATAAGTGGTTA+AGG | - | chr2_3:8746938-8746957 | None:intergenic | 30.0% | |
| GTCATGATCTTAAGAAAAGA+AGG | - | chr2_3:8747232-8747251 | None:intergenic | 30.0% | |
| !! | CTAATCTGAGTCTTTGAAAT+TGG | + | chr2_3:8747371-8747390 | Msa0276460:intron | 30.0% |
| ! | CAATTTTTCTTAACTGGGTT+CGG | - | chr2_3:8747839-8747858 | None:intergenic | 30.0% |
| !! | GGTTTTCAAGACTGAGTAAT+TGG | + | chr2_3:8741674-8741693 | Msa0276460:intron | 35.0% |
| !! | AGGTTTATTGATTTAGCCAC+TGG | + | chr2_3:8741958-8741977 | Msa0276460:intron | 35.0% |
| ATAACTGCAACTTATGCAAC+TGG | - | chr2_3:8742141-8742160 | None:intergenic | 35.0% | |
| CATAAGTTGCAGTTATAAGC+TGG | + | chr2_3:8742145-8742164 | Msa0276460:intron | 35.0% | |
| ATAAAAGAAGCTTGCAGTTC+TGG | - | chr2_3:8742495-8742514 | None:intergenic | 35.0% | |
| ! | TTGAGTTGTAAACTGTCAAC+GGG | - | chr2_3:8742725-8742744 | None:intergenic | 35.0% |
| ! | GTTGAGTTGTAAACTGTCAA+CGG | - | chr2_3:8742726-8742745 | None:intergenic | 35.0% |
| TTGACAGTTTACAACTCAAC+AGG | + | chr2_3:8742726-8742745 | Msa0276460:intron | 35.0% | |
| TGACAGTTTACAACTCAACA+GGG | + | chr2_3:8742727-8742746 | Msa0276460:intron | 35.0% | |
| !! | ATTCTGAAGCGTGTAGAAAA+AGG | + | chr2_3:8743122-8743141 | Msa0276460:CDS | 35.0% |
| ACTAAGGTAGCAGTTTATGT+TGG | + | chr2_3:8743201-8743220 | Msa0276460:intron | 35.0% | |
| !! | TAGCAGTTTATGTTGGTTTG+AGG | + | chr2_3:8743208-8743227 | Msa0276460:intron | 35.0% |
| TGAGGTTATGAGATGGTTAT+TGG | + | chr2_3:8743226-8743245 | Msa0276460:intron | 35.0% | |
| !!! | TTGTTGTTTGACTGTGGTTT+TGG | + | chr2_3:8743255-8743274 | Msa0276460:intron | 35.0% |
| !! | ATAAGGTTGGTGAAGCAATA+TGG | + | chr2_3:8743390-8743409 | Msa0276460:intron | 35.0% |
| CAAATAGCTGAGAAGTTAGA+AGG | + | chr2_3:8743429-8743448 | Msa0276460:intron | 35.0% | |
| ! | TGACTGAGGATCAAATTTTC+AGG | + | chr2_3:8743534-8743553 | Msa0276460:CDS | 35.0% |
| AACTACACTTTGACTGTGTT+TGG | + | chr2_3:8743563-8743582 | Msa0276460:intron | 35.0% | |
| CAAACAATCCAATCCAAACA+TGG | + | chr2_3:8743808-8743827 | Msa0276460:intron | 35.0% | |
| !! | TCAGAAGATTTTGGTACTGA+AGG | + | chr2_3:8744013-8744032 | Msa0276460:CDS | 35.0% |
| TTCATATCTGTTCCATGTGT+AGG | + | chr2_3:8744109-8744128 | Msa0276460:intron | 35.0% | |
| ! | ATTGTCAAAGTACCTACACA+TGG | - | chr2_3:8744124-8744143 | None:intergenic | 35.0% |
| AATGGAAACTCCTGTTAGTT+TGG | + | chr2_3:8744203-8744222 | Msa0276460:CDS | 35.0% | |
| ! | CTACTTATATTTAAGGTCGG+AGG | - | chr2_3:8744313-8744332 | None:intergenic | 35.0% |
| GCCTTATATTTGACCGAAAA+AGG | - | chr2_3:8744368-8744387 | None:intergenic | 35.0% | |
| ! | TTTTCGGTCAAATATAAGGC+CGG | + | chr2_3:8744368-8744387 | Msa0276460:intron | 35.0% |
| !!! | AAAGTCCAGGTTTTAAACTC+TGG | - | chr2_3:8744413-8744432 | None:intergenic | 35.0% |
| !! | TGATTTTGAGAAGAAAGTCC+AGG | - | chr2_3:8744426-8744445 | None:intergenic | 35.0% |
| TCTTCTCAAAATCATTTGGG+TGG | + | chr2_3:8744432-8744451 | Msa0276460:intron | 35.0% | |
| ! | TCAATTGCTTAATGGATGTC+AGG | + | chr2_3:8744543-8744562 | Msa0276460:intron | 35.0% |
| ACTACATCCTCGAGTTTAAT+CGG | - | chr2_3:8744592-8744611 | None:intergenic | 35.0% | |
| ! | AAACTCGAGGATGTAGTTTT+AGG | + | chr2_3:8744595-8744614 | Msa0276460:CDS | 35.0% |
| TGATGACAAAACTGTACCAA+AGG | + | chr2_3:8744666-8744685 | Msa0276460:CDS | 35.0% | |
| ATAGATAATGCAAGATGGGA+TGG | + | chr2_3:8744727-8744746 | Msa0276460:CDS | 35.0% | |
| TAGATAATGCAAGATGGGAT+GGG | + | chr2_3:8744728-8744747 | Msa0276460:CDS | 35.0% | |
| !!! | TACCTTTTTTGATGAAGGCT+GGG | + | chr2_3:8744752-8744771 | Msa0276460:CDS | 35.0% |
| TATTCCTTTCACTTACCTCT+TGG | - | chr2_3:8744791-8744810 | None:intergenic | 35.0% | |
| TAGCAGATCGTGAAAATTTG+CGG | + | chr2_3:8744832-8744851 | Msa0276460:intron | 35.0% | |
| !! | TTGTGACATTGGTTTGATGT+TGG | - | chr2_3:8744983-8745002 | None:intergenic | 35.0% |
| GATCTCAGCTTAAAAGAGAT+GGG | - | chr2_3:8745270-8745289 | None:intergenic | 35.0% | |
| TGATCTCAGCTTAAAAGAGA+TGG | - | chr2_3:8745271-8745290 | None:intergenic | 35.0% | |
| ! | TCTCTTTTAAGCTGAGATCA+AGG | + | chr2_3:8745271-8745290 | Msa0276460:intron | 35.0% |
| ! | CTCTTTTAAGCTGAGATCAA+GGG | + | chr2_3:8745272-8745291 | Msa0276460:intron | 35.0% |
| ATGCCAGAATAAGTGTTTCT+TGG | + | chr2_3:8745314-8745333 | Msa0276460:intron | 35.0% | |
| !! | GTTTTGGTCATGTGACTATT+TGG | + | chr2_3:8745525-8745544 | Msa0276460:intron | 35.0% |
| !! | TCATGTGACTATTTGGTGTA+AGG | + | chr2_3:8745532-8745551 | Msa0276460:intron | 35.0% |
| AATAGTAAGCTAACAGTGTG+AGG | - | chr2_3:8745687-8745706 | None:intergenic | 35.0% | |
| CTTACTATTGCATGACAAAC+TGG | + | chr2_3:8745698-8745717 | Msa0276460:CDS | 35.0% | |
| GATGTACAACAAAACACTCA+TGG | - | chr2_3:8745813-8745832 | None:intergenic | 35.0% | |
| !! | TGAGTGTTTTGTTGTACATC+AGG | + | chr2_3:8745813-8745832 | Msa0276460:intron | 35.0% |
| !!! | GACATTTGTTTTGTTCCGTT+TGG | + | chr2_3:8745976-8745995 | Msa0276460:intron | 35.0% |
| !!! | TTGTTGATTTTGGTTGAAGC+AGG | + | chr2_3:8746099-8746118 | Msa0276460:intron | 35.0% |
| !!! | TGTTGATTTTGGTTGAAGCA+GGG | + | chr2_3:8746100-8746119 | Msa0276460:intron | 35.0% |
| TCTTAATAAGCAATCAGAGC+TGG | + | chr2_3:8746163-8746182 | Msa0276460:CDS | 35.0% | |
| !! | TCGATGAAAGTATCCATATC+AGG | - | chr2_3:8746321-8746340 | None:intergenic | 35.0% |
| TCAAACAAACCTCTATAGAG+TGG | - | chr2_3:8746417-8746436 | None:intergenic | 35.0% | |
| ! | GGTAAGGCATTATAGATTCT+TGG | - | chr2_3:8746477-8746496 | None:intergenic | 35.0% |
| TAATACCTGCATGTGTCAAA+AGG | - | chr2_3:8746563-8746582 | None:intergenic | 35.0% | |
| !!! | GATAAGGTACACCCTTTTTT+CGG | - | chr2_3:8746703-8746722 | None:intergenic | 35.0% |
| GGGAACTTTGGTATAAGATA+AGG | - | chr2_3:8746719-8746738 | None:intergenic | 35.0% | |
| ! | TCTTAAAGTATTCCGGGAAA+GGG | - | chr2_3:8746739-8746758 | None:intergenic | 35.0% |
| ! | TTCTTAAAGTATTCCGGGAA+AGG | - | chr2_3:8746740-8746759 | None:intergenic | 35.0% |
| ! | GCACATTCTTAAAGTATTCC+GGG | - | chr2_3:8746745-8746764 | None:intergenic | 35.0% |
| AAATTAATGTTGTGCCTGTC+AGG | + | chr2_3:8747534-8747553 | Msa0276460:intron | 35.0% | |
| AATTAATGTTGTGCCTGTCA+GGG | + | chr2_3:8747535-8747554 | Msa0276460:intron | 35.0% | |
| TTGAAGATCAATGCACTTGA+AGG | + | chr2_3:8747621-8747640 | Msa0276460:three_prime_UTR | 35.0% | |
| TCTATAGCTGCAAATTGAAG+TGG | - | chr2_3:8747714-8747733 | None:intergenic | 35.0% | |
| AGGCAACTTATAATTGCCTA+AGG | - | chr2_3:8747763-8747782 | None:intergenic | 35.0% | |
| AGGGAGAAGAGTAGAAGAAA+TGG | + | chr2_3:8741607-8741626 | Msa0276460:CDS | 40.0% | |
| CAAGACTGAGTAATTGGAGA+TGG | + | chr2_3:8741680-8741699 | Msa0276460:intron | 40.0% | |
| AGTAATTGGAGATGGAAGCT+AGG | + | chr2_3:8741688-8741707 | Msa0276460:intron | 40.0% | |
| AGATGGAAGCTAGGAACTTA+AGG | + | chr2_3:8741697-8741716 | Msa0276460:intron | 40.0% | |
| AGATTATGCATGAGGGATGA+GGG | - | chr2_3:8741783-8741802 | None:intergenic | 40.0% | |
| TAGATTATGCATGAGGGATG+AGG | - | chr2_3:8741784-8741803 | None:intergenic | 40.0% | |
| TCACACGAAGACAATGCATT+TGG | - | chr2_3:8742321-8742340 | None:intergenic | 40.0% | |
| CATTGTCTTCGTGTGAGTAT+TGG | + | chr2_3:8742325-8742344 | Msa0276460:intron | 40.0% | |
| TGAGTTGTAAACTGTCAACG+GGG | - | chr2_3:8742724-8742743 | None:intergenic | 40.0% | |
| CATGGATCCGGATATTATCT+TGG | + | chr2_3:8742922-8742941 | Msa0276460:intron | 40.0% | |
| TTGAAGAATGAGCAGCATGA+AGG | - | chr2_3:8743006-8743025 | None:intergenic | 40.0% | |
| GTGACAGGGAACATATCATT+AGG | - | chr2_3:8743034-8743053 | None:intergenic | 40.0% | |
| TGAAGCGTGTAGAAAAAGGT+TGG | + | chr2_3:8743126-8743145 | Msa0276460:CDS | 40.0% | |
| GAAGCGTGTAGAAAAAGGTT+GGG | + | chr2_3:8743127-8743146 | Msa0276460:CDS | 40.0% | |
| AAGCGTGTAGAAAAAGGTTG+GGG | + | chr2_3:8743128-8743147 | Msa0276460:CDS | 40.0% | |
| !! | GTTGGTTTGAGGTTATGAGA+TGG | + | chr2_3:8743219-8743238 | Msa0276460:intron | 40.0% |
| TAGCTGAGAAGTTAGAAGGA+AGG | + | chr2_3:8743433-8743452 | Msa0276460:intron | 40.0% | |
| AGCTGAGAAGTTAGAAGGAA+GGG | + | chr2_3:8743434-8743453 | Msa0276460:intron | 40.0% | |
| TGATCTTGTTAAAGCAGCTG+AGG | - | chr2_3:8743501-8743520 | None:intergenic | 40.0% | |
| ! | TAAACACTTCTAGGAGCTCA+AGG | - | chr2_3:8743772-8743791 | None:intergenic | 40.0% |
| !! | TGAGCTCCTAGAAGTGTTTA+TGG | + | chr2_3:8743772-8743791 | Msa0276460:intron | 40.0% |
| CTATCTTGGAAAAGAGCTTG+TGG | + | chr2_3:8743904-8743923 | Msa0276460:CDS | 40.0% | |
| ! | TCCTGTTAGTTTGGATGTAG+AGG | + | chr2_3:8744212-8744231 | Msa0276460:CDS | 40.0% |
| TCCTCTACATCCAAACTAAC+AGG | - | chr2_3:8744216-8744235 | None:intergenic | 40.0% | |
| CTTCTAGCATATACATCCTC+CGG | - | chr2_3:8744390-8744409 | None:intergenic | 40.0% | |
| ! | AGAAGCCAGAGTTTAAAACC+TGG | + | chr2_3:8744405-8744424 | Msa0276460:intron | 40.0% |
| TATGAGACCGATTAAACTCG+AGG | + | chr2_3:8744582-8744601 | Msa0276460:CDS | 40.0% | |
| CTCTGGTGTGGTTCTTATAT+TGG | - | chr2_3:8744621-8744640 | None:intergenic | 40.0% | |
| CAATATAAGAACCACACCAG+AGG | + | chr2_3:8744619-8744638 | Msa0276460:CDS | 40.0% | |
| ! | GTTTTGTCATCAATGTAGGC+TGG | - | chr2_3:8744658-8744677 | None:intergenic | 40.0% |
| AGATAATGCAAGATGGGATG+GGG | + | chr2_3:8744729-8744748 | Msa0276460:CDS | 40.0% | |
| !!! | TGGGGTACCTTTTTTGATGA+AGG | + | chr2_3:8744747-8744766 | Msa0276460:CDS | 40.0% |
| !!! | GTACCTTTTTTGATGAAGGC+TGG | + | chr2_3:8744751-8744770 | Msa0276460:CDS | 40.0% |
| TTCCCAGCCTTCATCAAAAA+AGG | - | chr2_3:8744757-8744776 | None:intergenic | 40.0% | |
| AAAATAGGGGCTAATGACCA+TGG | - | chr2_3:8745496-8745515 | None:intergenic | 40.0% | |
| ACTATTGCATGACAAACTGG+TGG | + | chr2_3:8745701-8745720 | Msa0276460:CDS | 40.0% | |
| ! | TTTGTTGTACATCAGGTGAC+TGG | + | chr2_3:8745820-8745839 | Msa0276460:intron | 40.0% |
| ATCAGGTGACTGGTATATAC+AGG | + | chr2_3:8745830-8745849 | Msa0276460:intron | 40.0% | |
| TCAGGTGACTGGTATATACA+GGG | + | chr2_3:8745831-8745850 | Msa0276460:intron | 40.0% | |
| ATACAGGGCTATGAATGTCA+AGG | + | chr2_3:8745846-8745865 | Msa0276460:CDS | 40.0% | |
| GACTTAACAGTTCTCTGAGT+TGG | - | chr2_3:8745877-8745896 | None:intergenic | 40.0% | |
| !!! | GTTGATTTTGGTTGAAGCAG+GGG | + | chr2_3:8746101-8746120 | Msa0276460:intron | 40.0% |
| !!! | TTGATTTTGGTTGAAGCAGG+GGG | + | chr2_3:8746102-8746121 | Msa0276460:intron | 40.0% |
| ! | TTTTACGCTCCACTCTATAG+AGG | + | chr2_3:8746405-8746424 | Msa0276460:three_prime_UTR | 40.0% |
| AACCTTTCTTCCCCTTATAG+AGG | - | chr2_3:8746516-8746535 | None:intergenic | 40.0% | |
| ! | ACAATCCTTTTGACACATGC+AGG | + | chr2_3:8746555-8746574 | Msa0276460:intron | 40.0% |
| TATACCAAAGTTCCCTTTCC+CGG | + | chr2_3:8746724-8746743 | Msa0276460:three_prime_UTR | 40.0% | |
| ATTGGTTGAGATCTGACAGA+AGG | + | chr2_3:8746980-8746999 | Msa0276460:three_prime_UTR | 40.0% | |
| TTGGTTGAGATCTGACAGAA+GGG | + | chr2_3:8746981-8747000 | Msa0276460:three_prime_UTR | 40.0% | |
| ! | AGCATTATGCAGGTTGACTT+TGG | + | chr2_3:8747030-8747049 | Msa0276460:intron | 40.0% |
| TTGCAGAAATATGCAGCACA+GGG | + | chr2_3:8747154-8747173 | Msa0276460:intron | 40.0% | |
| ! | GACTCTGCCATATCTAAAGT+AGG | + | chr2_3:8747249-8747268 | Msa0276460:intron | 40.0% |
| TCAAAGTTCTCAAGTGGCAA+CGG | + | chr2_3:8747417-8747436 | Msa0276460:intron | 40.0% | |
| TCGGTGTGCAAAACAAAGTT+GGG | - | chr2_3:8747578-8747597 | None:intergenic | 40.0% | |
| TTGTTGCTAATCTTCCACCT+CGG | - | chr2_3:8747597-8747616 | None:intergenic | 40.0% | |
| GCAGAAAATAGCTTCAGTGC+AGG | + | chr2_3:8742076-8742095 | Msa0276460:intron | 45.0% | |
| ! | AAAGAAGCTTGCAGTTCTGG+AGG | - | chr2_3:8742492-8742511 | None:intergenic | 45.0% |
| !!! | CGGGGTGGATTGCTTTTTTT+CGG | - | chr2_3:8742706-8742725 | None:intergenic | 45.0% |
| TGCAATGAGTTCTGCGTCTA+TGG | + | chr2_3:8742955-8742974 | Msa0276460:intron | 45.0% | |
| GAATGAGCAGCATGAAGGAA+TGG | - | chr2_3:8743001-8743020 | None:intergenic | 45.0% | |
| ! | CTGTTACTTGACAGGGATGT+TGG | + | chr2_3:8743080-8743099 | Msa0276460:intron | 45.0% |
| GTAGAAAAAGGTTGGGGTCA+AGG | + | chr2_3:8743134-8743153 | Msa0276460:CDS | 45.0% | |
| GAGAAGTTAGAAGGAAGGGT+TGG | + | chr2_3:8743438-8743457 | Msa0276460:intron | 45.0% | |
| ATTCAAGCGGTATCTGACTG+AGG | + | chr2_3:8743520-8743539 | Msa0276460:CDS | 45.0% | |
| CCACTGCCATAAACACTTCT+AGG | - | chr2_3:8743781-8743800 | None:intergenic | 45.0% | |
| !! | CCTAGAAGTGTTTATGGCAG+TGG | + | chr2_3:8743778-8743797 | Msa0276460:intron | 45.0% |
| ! | TTTTTGACCCTTTGTGGTCG+AGG | + | chr2_3:8743960-8743979 | Msa0276460:CDS | 45.0% |
| TGTATTGCCTCGACCACAAA+GGG | - | chr2_3:8743970-8743989 | None:intergenic | 45.0% | |
| ATGTATTGCCTCGACCACAA+AGG | - | chr2_3:8743971-8743990 | None:intergenic | 45.0% | |
| !! | GATTTTGGTACTGAAGGACG+TGG | + | chr2_3:8744019-8744038 | Msa0276460:CDS | 45.0% |
| CAGGAGTTTCCATTGCAAAG+AGG | - | chr2_3:8744197-8744216 | None:intergenic | 45.0% | |
| ! | GCTTAATGGATGTCAGGTCA+AGG | + | chr2_3:8744549-8744568 | Msa0276460:intron | 45.0% |
| TATAAGAACCACACCAGAGG+AGG | + | chr2_3:8744622-8744641 | Msa0276460:CDS | 45.0% | |
| !! | GGAAAGCATTACACACCAAG+AGG | + | chr2_3:8744773-8744792 | Msa0276460:CDS | 45.0% |
| CACACCAAGAGGTAAGTGAA+AGG | + | chr2_3:8744784-8744803 | Msa0276460:intron | 45.0% | |
| ! | GATAAGTTGGATGATGGCCA+TGG | + | chr2_3:8745476-8745495 | Msa0276460:intron | 45.0% |
| ! | CATGACAAACTGGTGGATAC+TGG | + | chr2_3:8745708-8745727 | Msa0276460:CDS | 45.0% |
| AGGGCTATGAATGTCAAGGT+GGG | + | chr2_3:8745850-8745869 | Msa0276460:CDS | 45.0% | |
| TCCGTTTGGCCCTTAAAAGT+TGG | + | chr2_3:8745990-8746009 | Msa0276460:intron | 45.0% | |
| !! | GCCAACTTTTAAGGGCCAAA+CGG | - | chr2_3:8745994-8746013 | None:intergenic | 45.0% |
| !!! | GAGCATGGGGTTGTTGATTT+TGG | + | chr2_3:8746089-8746108 | Msa0276460:intron | 45.0% |
| AGTCTGGCTGATACCTGATA+TGG | + | chr2_3:8746305-8746324 | Msa0276460:exon | 45.0% | |
| CATCGCACCTGATATGTCTT+TGG | - | chr2_3:8746381-8746400 | None:intergenic | 45.0% | |
| CTTATAGAGGTGGCTAGGAA+GGG | - | chr2_3:8746503-8746522 | None:intergenic | 45.0% | |
| CTTCCTAGCCACCTCTATAA+GGG | + | chr2_3:8746502-8746521 | Msa0276460:intron | 45.0% | |
| TTCCTAGCCACCTCTATAAG+GGG | + | chr2_3:8746503-8746522 | Msa0276460:intron | 45.0% | |
| CTTTCTTCCCCTTATAGAGG+TGG | - | chr2_3:8746513-8746532 | None:intergenic | 45.0% | |
| CACCTCTATAAGGGGAAGAA+AGG | + | chr2_3:8746511-8746530 | Msa0276460:intron | 45.0% | |
| TATTCCGGGAAAGGGAACTT+TGG | - | chr2_3:8746731-8746750 | None:intergenic | 45.0% | |
| TGCAAATGGTTGCTGCAGAT+TGG | + | chr2_3:8746962-8746981 | Msa0276460:intron | 45.0% | |
| GACAGAAGGGAAGATGATCT+TGG | + | chr2_3:8746994-8747013 | Msa0276460:three_prime_UTR | 45.0% | |
| AGAAGGGAAGATGATCTTGG+TGG | + | chr2_3:8746997-8747016 | Msa0276460:three_prime_UTR | 45.0% | |
| !!! | GCAGGTTGACTTTGGTGTTT+TGG | + | chr2_3:8747038-8747057 | Msa0276460:intron | 45.0% |
| CTTGCAGAAATATGCAGCAC+AGG | + | chr2_3:8747153-8747172 | Msa0276460:intron | 45.0% | |
| AGAAATATGCAGCACAGGGT+GGG | + | chr2_3:8747158-8747177 | Msa0276460:intron | 45.0% | |
| GCCTGTCAGGGATATAACTA+TGG | + | chr2_3:8747547-8747566 | Msa0276460:intron | 45.0% | |
| GCCATAGTTATATCCCTGAC+AGG | - | chr2_3:8747551-8747570 | None:intergenic | 45.0% | |
| ! | CTCGGTGTGCAAAACAAAGT+TGG | - | chr2_3:8747579-8747598 | None:intergenic | 45.0% |
| !!! | CAACTTTGTTTTGCACACCG+AGG | + | chr2_3:8747577-8747596 | Msa0276460:three_prime_UTR | 45.0% |
| !!! | TTATTTTATTTTGTTTTATT+TGG | + | chr2_3:8743346-8743365 | Msa0276460:intron | 5.0% |
| GTTTGGGTAAGAGGGATCTG+AGG | + | chr2_3:8741569-8741588 | Msa0276460:CDS | 50.0% | |
| TGCATGAGGGATGAGGGAAA+GGG | - | chr2_3:8741777-8741796 | None:intergenic | 50.0% | |
| ATGCATGAGGGATGAGGGAA+AGG | - | chr2_3:8741778-8741797 | None:intergenic | 50.0% | |
| !! | GGTTTTATGGACTGCTGTGC+TGG | + | chr2_3:8742224-8742243 | Msa0276460:intron | 50.0% |
| ! | ATGGACTGCTGTGCTGGAAT+TGG | + | chr2_3:8742230-8742249 | Msa0276460:intron | 50.0% |
| GTTGTAAACTGTCAACGGGG+TGG | - | chr2_3:8742721-8742740 | None:intergenic | 50.0% | |
| TCGGTCAAATATAAGGCCGG+AGG | + | chr2_3:8744371-8744390 | Msa0276460:intron | 50.0% | |
| TACGCCTCAGCTCATGGTTA+TGG | + | chr2_3:8744475-8744494 | Msa0276460:intron | 50.0% | |
| AGGTCCATAACCATGAGCTG+AGG | - | chr2_3:8744482-8744501 | None:intergenic | 50.0% | |
| TGGATATGCAACACCTCCTC+TGG | - | chr2_3:8744638-8744657 | None:intergenic | 50.0% | |
| GTCTGGGTTAAGCTGTCCTT+TGG | - | chr2_3:8744685-8744704 | None:intergenic | 50.0% | |
| CTTAACCCAGACATTTGCCG+CGG | + | chr2_3:8744693-8744712 | Msa0276460:CDS | 50.0% | |
| ACACCTGACGAGATACCTGA+GGG | + | chr2_3:8745654-8745673 | Msa0276460:CDS | 50.0% | |
| AAAGCCAGGTGACAGAGTTG+AGG | + | chr2_3:8745731-8745750 | Msa0276460:CDS | 50.0% | |
| CAGGGCTATGAATGTCAAGG+TGG | + | chr2_3:8745849-8745868 | Msa0276460:CDS | 50.0% | |
| GGGGATCAGTCAACAGAAAG+AGG | + | chr2_3:8746121-8746140 | Msa0276460:CDS | 50.0% | |
| TGGCTAGGAAGGGATAGGTA+AGG | - | chr2_3:8746493-8746512 | None:intergenic | 50.0% | |
| CCTTATAGAGGTGGCTAGGA+AGG | - | chr2_3:8746504-8746523 | None:intergenic | 50.0% | |
| CCTTCCTAGCCACCTCTATA+AGG | + | chr2_3:8746501-8746520 | Msa0276460:intron | 50.0% | |
| TTCCCCTTATAGAGGTGGCT+AGG | - | chr2_3:8746508-8746527 | None:intergenic | 50.0% | |
| TCAACCTGCATAATGCTCCC+AGG | - | chr2_3:8747027-8747046 | None:intergenic | 50.0% | |
| CAGAAATATGCAGCACAGGG+TGG | + | chr2_3:8747157-8747176 | Msa0276460:intron | 50.0% | |
| !!! | CTTTGTTTTGCACACCGAGG+TGG | + | chr2_3:8747580-8747599 | Msa0276460:three_prime_UTR | 50.0% |
| !! | ATGGTGATGGCAGCAAGCTC+TGG | - | chr2_3:8741734-8741753 | None:intergenic | 55.0% |
| GCAAGCAGTGTAGAGAGCGA+TGG | + | chr2_3:8743460-8743479 | Msa0276460:intron | 55.0% | |
| ! | TTGGTACTGAAGGACGTGGC+AGG | + | chr2_3:8744023-8744042 | Msa0276460:CDS | 55.0% |
| TTGAGCTACGCCTCAGCTCA+TGG | + | chr2_3:8744469-8744488 | Msa0276460:intron | 55.0% | |
| ATGCAACACCTCCTCTGGTG+TGG | - | chr2_3:8744633-8744652 | None:intergenic | 55.0% | |
| ATCTATGAAGTGGGCAGCCG+CGG | - | chr2_3:8744713-8744732 | None:intergenic | 55.0% | |
| GACACCTGACGAGATACCTG+AGG | + | chr2_3:8745653-8745672 | Msa0276460:CDS | 55.0% | |
| ! | CTGGTGGATACTGGAAAGCC+AGG | + | chr2_3:8745717-8745736 | Msa0276460:CDS | 55.0% |
| CTCACCTCAACTCTGTCACC+TGG | - | chr2_3:8745738-8745757 | None:intergenic | 55.0% | |
| AGAGGTGGCTAGGAAGGGAT+AGG | - | chr2_3:8746498-8746517 | None:intergenic | 55.0% | |
| CTGGCTCCGTGAGTACAAAG+AGG | - | chr2_3:8746587-8746606 | None:intergenic | 55.0% | |
| GAGCCAGTCGTCTAGGTCAA+GGG | + | chr2_3:8746600-8746619 | Msa0276460:three_prime_UTR | 55.0% | |
| AGCCAGTCGTCTAGGTCAAG+GGG | + | chr2_3:8746601-8746620 | Msa0276460:three_prime_UTR | 55.0% | |
| ! | ATGATCTTGGTGGCCGTCCT+GGG | + | chr2_3:8747007-8747026 | Msa0276460:three_prime_UTR | 55.0% |
| CCTGCATAATGCTCCCAGGA+CGG | - | chr2_3:8747023-8747042 | None:intergenic | 55.0% | |
| ! | GGGATCTGAGGTCGAGAGTG+AGG | + | chr2_3:8741581-8741600 | Msa0276460:CDS | 60.0% |
| TGAGGTCGAGAGTGAGGCAG+AGG | + | chr2_3:8741587-8741606 | Msa0276460:CDS | 60.0% | |
| GAGGTCGAGAGTGAGGCAGA+GGG | + | chr2_3:8741588-8741607 | Msa0276460:CDS | 60.0% | |
| GAGCTGAGGCGTAGCTCAAG+TGG | - | chr2_3:8744468-8744487 | None:intergenic | 60.0% | |
| CCTCCCTCAGGTATCTCGTC+AGG | - | chr2_3:8745660-8745679 | None:intergenic | 60.0% | |
| CCTGACGAGATACCTGAGGG+AGG | + | chr2_3:8745657-8745676 | Msa0276460:CDS | 60.0% | |
| ACTCACGGAGCCAGTCGTCT+AGG | + | chr2_3:8746593-8746612 | Msa0276460:three_prime_UTR | 60.0% | |
| GGAGCCAGTCGTCTAGGTCA+AGG | + | chr2_3:8746599-8746618 | Msa0276460:three_prime_UTR | 60.0% | |
| AGCCCCTTGACCTAGACGAC+TGG | - | chr2_3:8746606-8746625 | None:intergenic | 60.0% | |
| ! | GATGATCTTGGTGGCCGTCC+TGG | + | chr2_3:8747006-8747025 | Msa0276460:three_prime_UTR | 60.0% |
| !! | CCGTCCTGGGAGCATTATGC+AGG | + | chr2_3:8747020-8747039 | Msa0276460:three_prime_UTR | 60.0% |
| GGCAGCCGCGGCAAATGTCT+GGG | - | chr2_3:8744701-8744720 | None:intergenic | 65.0% | |
| ! | GTGTGAGGCGTTCCTCCCTC+AGG | - | chr2_3:8745672-8745691 | None:intergenic | 65.0% |
| GGGCAGCCGCGGCAAATGTC+TGG | - | chr2_3:8744702-8744721 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 8741562 | 8747877 | 8741562 | ID=Msa0276460;Name=Msa0276460 |
| chr2_3 | mRNA | 8741562 | 8747877 | 8741562 | ID=Msa0276460-mRNA-1;Parent=Msa0276460;Name=Msa0276460-mRNA-1;_AED=0.25;_eAED=0.28;_QI=0|0.61|0.57|1|0.84|0.78|14|897|339 |
| chr2_3 | exon | 8741562 | 8741653 | 8741562 | ID=Msa0276460-mRNA-1:exon:3937;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8743094 | 8743158 | 8743094 | ID=Msa0276460-mRNA-1:exon:3938;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8743504 | 8743555 | 8743504 | ID=Msa0276460-mRNA-1:exon:3939;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8743895 | 8744044 | 8743895 | ID=Msa0276460-mRNA-1:exon:3940;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8744131 | 8744251 | 8744131 | ID=Msa0276460-mRNA-1:exon:3941;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8744565 | 8744794 | 8744565 | ID=Msa0276460-mRNA-1:exon:3942;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8745620 | 8745752 | 8745620 | ID=Msa0276460-mRNA-1:exon:3943;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8745835 | 8745893 | 8745835 | ID=Msa0276460-mRNA-1:exon:3944;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8746121 | 8746211 | 8746121 | ID=Msa0276460-mRNA-1:exon:3945;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8746296 | 8746426 | 8746296 | ID=Msa0276460-mRNA-1:exon:3946;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8746577 | 8746878 | 8746577 | ID=Msa0276460-mRNA-1:exon:3947;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8746980 | 8747041 | 8746980 | ID=Msa0276460-mRNA-1:exon:3948;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8747160 | 8747266 | 8747160 | ID=Msa0276460-mRNA-1:exon:3949;Parent=Msa0276460-mRNA-1 |
| chr2_3 | exon | 8747556 | 8747877 | 8747556 | ID=Msa0276460-mRNA-1:exon:3950;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8741562 | 8741653 | 8741562 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8743094 | 8743158 | 8743094 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8743504 | 8743555 | 8743504 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8743895 | 8744044 | 8743895 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8744131 | 8744251 | 8744131 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8744565 | 8744794 | 8744565 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8745620 | 8745752 | 8745620 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8745835 | 8745893 | 8745835 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8746121 | 8746211 | 8746121 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | CDS | 8746296 | 8746322 | 8746296 | ID=Msa0276460-mRNA-1:cds;Parent=Msa0276460-mRNA-1 |
| chr2_3 | three_prime_UTR | 8746323 | 8746426 | 8746323 | ID=Msa0276460-mRNA-1:three_prime_utr;Parent=Msa0276460-mRNA-1 |
| chr2_3 | three_prime_UTR | 8746577 | 8746878 | 8746577 | ID=Msa0276460-mRNA-1:three_prime_utr;Parent=Msa0276460-mRNA-1 |
| chr2_3 | three_prime_UTR | 8746980 | 8747041 | 8746980 | ID=Msa0276460-mRNA-1:three_prime_utr;Parent=Msa0276460-mRNA-1 |
| chr2_3 | three_prime_UTR | 8747160 | 8747266 | 8747160 | ID=Msa0276460-mRNA-1:three_prime_utr;Parent=Msa0276460-mRNA-1 |
| chr2_3 | three_prime_UTR | 8747556 | 8747877 | 8747556 | ID=Msa0276460-mRNA-1:three_prime_utr;Parent=Msa0276460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
